View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20570_low_85 (Length: 216)
Name: NF20570_low_85
Description: NF20570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20570_low_85 |
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Alignment Details
Target: chr3 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 14 - 198
Target Start/End: Original strand, 45107396 - 45107580
Alignment:
| Q |
14 |
cacagacaaaagagaatcccaataacaatgttgatgtaaatatccttaacttcttttccttcaggagtatgttcaacaatccaaaacattgcaggacggt |
113 |
Q |
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| T |
45107396 |
cacaaacaaaagagaatcccaataacaatgttgatgtaaatatccttaacttcttttccttcaggagtatgttcaacaatccaaaacattgcaggacggt |
45107495 |
T |
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| Q |
114 |
agattaataaaatgaagagagtgatggcaaataaatatcccaacctcatgacaggtgaaatataatgaccctgatcaagcagagt |
198 |
Q |
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| T |
45107496 |
agattaataaaatgaagagagtgatggcaaataaatatcccaacctcatgacaggtgaaatataatgaccctgatcaagcagagt |
45107580 |
T |
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