View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20573_high_64 (Length: 229)
Name: NF20573_high_64
Description: NF20573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20573_high_64 |
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Alignment Details
Target: chr3 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 37316381 - 37316586
Alignment:
| Q |
1 |
tggcagaagaaggaataacaagttagtattatataggtgtttcagtaccacgctatcaagtgactttttgttgaagtttactaaaatcacaaactcatga |
100 |
Q |
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| T |
37316381 |
tggcagaagaaggaataacaagttagtattatataggtgtttcagtgccacgctatcaagtgactttttgttgaagtttactaaaatcacaaactcatga |
37316480 |
T |
|
| Q |
101 |
ataaacgctataagttagttagtgggaaaagccctattcgctagaaccattttggacttgtcaaagccctcgtgtgtgtggtcccttcaataatatttgt |
200 |
Q |
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||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
37316481 |
ataaacgctataagttagttagttggaaaagccctattcgctagaaccattttggacttgtcaaagccctcatgtgtgtggtcccttcaataatatttgt |
37316580 |
T |
|
| Q |
201 |
ttgttc |
206 |
Q |
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|||||| |
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|
| T |
37316581 |
ttgttc |
37316586 |
T |
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