View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20573_high_67 (Length: 225)
Name: NF20573_high_67
Description: NF20573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20573_high_67 |
 |  |
|
| [»] scaffold0171 (1 HSPs) |
 |  |  |
|
| [»] scaffold2117 (1 HSPs) |
 |  |  |
|
| [»] scaffold0041 (3 HSPs) |
 |  |  |
|
| [»] scaffold0034 (1 HSPs) |
 |  |  |
|
| [»] scaffold0065 (1 HSPs) |
 |  |  |
|
| [»] scaffold0007 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr5 (Bit Score: 97; Significance: 8e-48; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 98 - 218
Target Start/End: Original strand, 14356718 - 14356838
Alignment:
| Q |
98 |
cttccaaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccacaacaatcttccaaaatcatatcaacaa |
197 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| |
|
|
| T |
14356718 |
cttccaaaaattcatcattttaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccacaacaatcatccaaaatcagatcaacaa |
14356817 |
T |
 |
| Q |
198 |
cacctgctcactccaaaaaga |
218 |
Q |
| |
|
|||| |||||||||||||| |
|
|
| T |
14356818 |
cacccattcactccaaaaaga |
14356838 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 187
Target Start/End: Original strand, 30915763 - 30915848
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccacaacaatcttccaaaatc |
187 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| || ||| | ||||||| |
|
|
| T |
30915763 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaatttataattaacaccaccaccatcattcaaaatc |
30915848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 33362416 - 33362349
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccac |
170 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||||||| |
|
|
| T |
33362416 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaac-ctttaaattataattaacaccac |
33362349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 30915950 - 30915906
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaac |
146 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30915950 |
caaaaattcatcatttcaacttcaacaaaaaccacaccatcaaac |
30915906 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 14357713 - 14357647
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacacca |
169 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||||||| ||||| |||||| ||||||| |
|
|
| T |
14357713 |
aaaaattcatcatttcaacttcaacaaaattcacaaaatcaaacatttaaatttataattaacacca |
14357647 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 144
Target Start/End: Original strand, 9038709 - 9038751
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaa |
144 |
Q |
| |
|
||||||||||||||||||| || ||||||||| |||||||||| |
|
|
| T |
9038709 |
caaaaattcatcatttcaaatttaacaaaaacaacataatcaa |
9038751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 25001901 - 25001942
Alignment:
| Q |
104 |
aaaattcatcatttcaacttcaacaaaaaccacataatcaaac |
146 |
Q |
| |
|
|||||||||||||||| |||||||||||| ||||||||||||| |
|
|
| T |
25001901 |
aaaattcatcatttcatcttcaacaaaaa-cacataatcaaac |
25001942 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 145
Target Start/End: Complemental strand, 26404006 - 26403964
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaa |
145 |
Q |
| |
|
||||||||||||||||||||||| |||||| || ||||||||| |
|
|
| T |
26404006 |
aaaaattcatcatttcaacttcatcaaaaatcatataatcaaa |
26403964 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 151
Target Start/End: Original strand, 39349865 - 39349903
Alignment:
| Q |
113 |
catttcaacttcaacaaaaaccacataatcaaactctta |
151 |
Q |
| |
|
||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
39349865 |
catttcaacttcaacaaaaaccacataattaaacactta |
39349903 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 67; Significance: 6e-30; HSPs: 14)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 98 - 172
Target Start/End: Complemental strand, 29658450 - 29658376
Alignment:
| Q |
98 |
cttccaaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccacaa |
172 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
29658450 |
cttccaaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataattaacatcacaa |
29658376 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 103 - 187
Target Start/End: Complemental strand, 22794170 - 22794086
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccacaacaatcttccaaaatc |
187 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |||||| | ||||||| |
|
|
| T |
22794170 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaatttataattaacaccaccacaatcattcaaaatc |
22794086 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 186
Target Start/End: Complemental strand, 7147710 - 7147628
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccacaacaatcttccaaaat |
186 |
Q |
| |
|
||||||| |||||||||| ||||||||||| |||||||||||||| ||||| ||| ||| ||||||||||| ||| |||||||| |
|
|
| T |
7147710 |
aaaaatttatcatttcaatttcaacaaaaatcacataatcaaact-ttaaatctacaattaacaccacaaccatcatccaaaat |
7147628 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 166
Target Start/End: Complemental strand, 40918162 - 40918099
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaaca |
166 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| |||| |
|
|
| T |
40918162 |
aaaaattcatgatttcaacttcaacaaaaaccacataatcaaacctttaaatctataattaaca |
40918099 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 29409072 - 29409004
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccac |
170 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| | |||||||| |||||| | ||||| |||||||| |
|
|
| T |
29409072 |
caaaaattcatcattttaacttcaacaaaaaccataaaatcaaacccttaaatccataattaacaccac |
29409004 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 157
Target Start/End: Original strand, 8540854 - 8540908
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaacta |
157 |
Q |
| |
|
|||||||||||| || ||||| ||||||||||| ||||||||||||||||||||| |
|
|
| T |
8540854 |
aaaaattcatcaatttaactttaacaaaaaccatataatcaaactcttaaaacta |
8540908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 187
Target Start/End: Original strand, 29657276 - 29657361
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccacaacaatcttccaaaatc |
187 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| | |||||||| ||||| |||||| |||||||| || ||| | ||||||| |
|
|
| T |
29657276 |
caaaaattcatcatttcaacttcaacaaaatccaaaaaatcaaacatttaaatttataattaacaccaccaccatcattcaaaatc |
29657361 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 4973883 - 4973839
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaac |
146 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||| |||||||| |
|
|
| T |
4973883 |
caaaaattcatcatttcaacttgaacaaaaaccacaaaatcaaac |
4973839 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 19217892 - 19217934
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaa |
145 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
19217892 |
caaaaattcatcatttcaacttcaacaaaaa-cacataatcaaa |
19217934 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 142
Target Start/End: Original strand, 32893716 - 32893755
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatc |
142 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
32893716 |
aaaaattcatcatttcaacttcaacaaaaaccacaaaatc |
32893755 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 133
Target Start/End: Complemental strand, 19218813 - 19218782
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaac |
133 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
19218813 |
caaaaattcatcatttcaacttcaacaaaaac |
19218782 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 145
Target Start/End: Complemental strand, 22061593 - 22061551
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaa |
145 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||| ||||||||| |
|
|
| T |
22061593 |
aaaaattcatcttttcaacttcatcaaaaaccatataatcaaa |
22061551 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 145
Target Start/End: Complemental strand, 48672200 - 48672158
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaa |
145 |
Q |
| |
|
||||||||||||||| ||||||| ||||||||| ||||||||| |
|
|
| T |
48672200 |
aaaaattcatcattttaacttcatcaaaaaccatataatcaaa |
48672158 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 43006676 - 43006744
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccac |
170 |
Q |
| |
|
|||||||||||||||||||||||| ||||| || ||||||||| |||||| || ||| |||||||| |
|
|
| T |
43006676 |
caaaaattcatcatttcaacttcataaaaaatcatataatcaaatccttaaatctggaataaacaccac |
43006744 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 58; Significance: 1e-24; HSPs: 12)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 104 - 177
Target Start/End: Complemental strand, 5548484 - 5548411
Alignment:
| Q |
104 |
aaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccacaacaatc |
177 |
Q |
| |
|
|||||||||||||| |||||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
5548484 |
aaaattcatcattttaacttcaacaaaaatcacataatcaaactctaaaaactataattaacaccacaacaatc |
5548411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 102 - 215
Target Start/End: Complemental strand, 37642369 - 37642256
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccacaacaatcttccaaaatcatatcaacaacacc |
201 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| || ||| | |||||| |||| ||||||| |
|
|
| T |
37642369 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaatttataatcaacaccaccaccatcattcaaaattggatcatcaacacc |
37642270 |
T |
 |
| Q |
202 |
tgctcactccaaaa |
215 |
Q |
| |
|
||||||||||| |
|
|
| T |
37642269 |
cattcactccaaaa |
37642256 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 102 - 170
Target Start/End: Original strand, 5547179 - 5547247
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccac |
170 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
5547179 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaatttataattaacaccac |
5547247 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 146
Target Start/End: Complemental strand, 54373838 - 54373795
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaac |
146 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
54373838 |
aaaaattcatcatttcaacttcaacaaaaaccacaaaatcaaac |
54373795 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 146
Target Start/End: Complemental strand, 49923596 - 49923553
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaac |
146 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| |||||||| |
|
|
| T |
49923596 |
aaaaattcatcatttctacttcaacaaaaaccacaaaatcaaac |
49923553 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 144
Target Start/End: Complemental strand, 17522394 - 17522353
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaa |
144 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
17522394 |
caaaaattcatcatttcaacttcaacaaaaa-cacataatcaa |
17522353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 5433227 - 5433183
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaac |
146 |
Q |
| |
|
|||||||||||||||||||||| | ||||||| |||||||||||| |
|
|
| T |
5433227 |
caaaaattcatcatttcaacttaatcaaaaacaacataatcaaac |
5433183 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 146
Target Start/End: Complemental strand, 23757775 - 23757732
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaac |
146 |
Q |
| |
|
||||||||||||||||||||| | ||||||| |||||||||||| |
|
|
| T |
23757775 |
aaaaattcatcatttcaacttaatcaaaaacaacataatcaaac |
23757732 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 141
Target Start/End: Original strand, 48481202 - 48481241
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataat |
141 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
48481202 |
caaaaattcattatttcaacttcaacaaaaaccacgtaat |
48481241 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 55953105 - 55953148
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaa |
145 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||| ||||||||| |
|
|
| T |
55953105 |
caaaaattcatcatttcaacttaatcaaaaaccatataatcaaa |
55953148 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 44128133 - 44128083
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaa |
153 |
Q |
| |
|
|||||||||||||||||| |||| ||||||| | ||||||||| ||||||| |
|
|
| T |
44128133 |
aaaaattcatcatttcaatttcatcaaaaactatataatcaaattcttaaa |
44128083 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 49922792 - 49922836
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaac |
146 |
Q |
| |
|
|||||||||||||||| || |||||||||||| ||| |||||||| |
|
|
| T |
49922792 |
caaaaattcatcattttaatttcaacaaaaactacaaaatcaaac |
49922836 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0171 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0171
Description:
Target: scaffold0171; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 29084 - 29000
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccacaacaatcttccaaaat |
186 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||| ||||||||||| ||| |||||||| |
|
|
| T |
29084 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaatctacaattaacaccacaaccatcatccaaaat |
29000 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2117 (Bit Score: 49; Significance: 3e-19; HSPs: 1)
Name: scaffold2117
Description:
Target: scaffold2117; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 354 - 270
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccacaacaatcttccaaaat |
186 |
Q |
| |
|
|||||||||||||||| ||||| |||||||| || |||||||||| |||||| ||||||| ||||||||||| ||| |||||||| |
|
|
| T |
354 |
caaaaattcatcatttaaactttaacaaaaaacaaataatcaaacccttaaatctataattaacaccacaaccatcatccaaaat |
270 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 49; Significance: 3e-19; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 11080862 - 11080794
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccac |
170 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
11080862 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaatttataattaacaccac |
11080794 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 42307762 - 42307805
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaac |
146 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42307762 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaac |
42307805 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 12819929 - 12819878
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaa |
153 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||| || |||| |||||| |
|
|
| T |
12819929 |
caaaaattcatcttttcaacttcaacaaaaaccacattattaaacccttaaa |
12819878 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 43276066 - 43276109
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaa |
145 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||| ||||||||| |
|
|
| T |
43276066 |
caaaaattcatcatttcaacttaatcaaaaaccatataatcaaa |
43276109 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 145
Target Start/End: Complemental strand, 27750424 - 27750382
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaa |
145 |
Q |
| |
|
||||||| ||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
27750424 |
aaaaattgatcatttcaacttcatcaaaaaccatataatcaaa |
27750382 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 41637213 - 41637261
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactctta |
151 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| ||||| |||| |||| |
|
|
| T |
41637213 |
caaaaatt-atcatttcaacttcaacaaaaaccatataattaaacactta |
41637261 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 49; Significance: 3e-19; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 102 - 186
Target Start/End: Original strand, 36627196 - 36627279
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccacaacaatcttccaaaat |
186 |
Q |
| |
|
|||||||| |||||||||||||||||||||| |||||||||||||| ||||| ||| ||| ||||||||||| ||| |||||||| |
|
|
| T |
36627196 |
caaaaatttatcatttcaacttcaacaaaaatcacataatcaaact-ttaaatctacaattaacaccacaaccatcatccaaaat |
36627279 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 54353318 - 54353366
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactctta |
151 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
54353318 |
caaaaatt-atcatttcaacttcaacaaaaaccacataattaaacactta |
54353366 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 158
Target Start/End: Original strand, 42633010 - 42633065
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactat |
158 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |||||||| |||||| |||| |
|
|
| T |
42633010 |
aaaaattcatcatttcaacttcatcaaaaaccatgtaatcaaatccttaaacctat |
42633065 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 145
Target Start/End: Complemental strand, 41387231 - 41387189
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaa |
145 |
Q |
| |
|
||||||||||||||||||||||| |||||| || ||||||||| |
|
|
| T |
41387231 |
aaaaattcatcatttcaacttcatcaaaaatcatataatcaaa |
41387189 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 14206613 - 14206572
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaa |
144 |
Q |
| |
|
||||||| |||||||||||||||| ||||| ||||||||||| |
|
|
| T |
14206613 |
aaaaatttatcatttcaacttcaataaaaatcacataatcaa |
14206572 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 14214361 - 14214320
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaa |
144 |
Q |
| |
|
||||||| |||||||||||||||| ||||| ||||||||||| |
|
|
| T |
14214361 |
aaaaatttatcatttcaacttcaataaaaatcacataatcaa |
14214320 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 111 - 152
Target Start/End: Original strand, 47916438 - 47916479
Alignment:
| Q |
111 |
atcatttcaacttcaacaaaaaccacataatcaaactcttaa |
152 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||| ||||| |
|
|
| T |
47916438 |
atcatttcaacttcaacaaatacaacataatcaaacccttaa |
47916479 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 48; Significance: 1e-18; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 682542 - 682609
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccac |
170 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||||| |
|
|
| T |
682542 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaacctttaaatttataattaacaccac |
682609 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 18498260 - 18498303
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaac |
146 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
18498260 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaac |
18498303 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 102 - 153
Target Start/End: Complemental strand, 18499730 - 18499679
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaa |
153 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||||||||| |||||| |
|
|
| T |
18499730 |
caaaaatccatcatttcaaattcaacaaaaaccacataatcaaacccttaaa |
18499679 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 21455422 - 21455489
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccac |
170 |
Q |
| |
|
||||| |||||||| |||||||||||| ||| ||||||||||||||||||| ||| ||| |||||||| |
|
|
| T |
21455422 |
aaaaactcatcattccaacttcaacaataactacataatcaaactcttaaatctagaattaacaccac |
21455489 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 1756541 - 1756605
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaaca |
166 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||||||||| |||| |||||| || |||||||| |
|
|
| T |
1756541 |
caaaaatttatcatttcaactttaacaaaaaccacataattaaacccttaaatttagaatcaaca |
1756605 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 9)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 98 - 167
Target Start/End: Complemental strand, 40779480 - 40779411
Alignment:
| Q |
98 |
cttccaaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacac |
167 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||| ||||| |
|
|
| T |
40779480 |
cttccaaaaattcatcatttcaacttcaacaaaaaccacaaaatcaaacatttaaatttataattaacac |
40779411 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 102 - 193
Target Start/End: Complemental strand, 49619655 - 49619564
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccacaacaatcttccaaaatcatatca |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||| ||||| || ||| |||||||| || ||| | |||||||| |||| |
|
|
| T |
49619655 |
caaaaattcatcatttcaacttcaacaaaaaccacaaaatcaaacatttaaatttagaattaacaccaccaccatcattcaaaatcagatca |
49619564 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 49618712 - 49618748
Alignment:
| Q |
98 |
cttccaaaaattcatcatttcaacttcaacaaaaacc |
134 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49618712 |
cttccaaaaattcatcatttcaacttcaacaaaaacc |
49618748 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 158
Target Start/End: Complemental strand, 25786963 - 25786908
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactat |
158 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| ||||||||| |||||| |||| |
|
|
| T |
25786963 |
aaaaattcatcatttcaacttcatcaaaaaccatgtaatcaaacccttaaacctat |
25786908 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 146
Target Start/End: Original strand, 40778658 - 40778701
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaac |
146 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
40778658 |
aaaaattcatcatttcaacttcagcaaaaaccacaaaatcaaac |
40778701 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 145
Target Start/End: Original strand, 51693412 - 51693454
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaa |
145 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
51693412 |
caaaaattcatcatttcaacttcaacaaaaa-cacataatcaaa |
51693454 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 40187897 - 40187945
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactctta |
151 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
40187897 |
caaaaatt-atcatttcaacttcaacaaaaaccacataattaaacactta |
40187945 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 151
Target Start/End: Original strand, 50483889 - 50483929
Alignment:
| Q |
111 |
atcatttcaacttcaacaaaaaccacataatcaaactctta |
151 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||| |
|
|
| T |
50483889 |
atcatttcaacttcaacaaaaaccacataattaaacactta |
50483929 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 103 - 144
Target Start/End: Complemental strand, 52439115 - 52439074
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaa |
144 |
Q |
| |
|
||||||| |||||||||||||||| ||||| ||||||||||| |
|
|
| T |
52439115 |
aaaaatttatcatttcaacttcaataaaaatcacataatcaa |
52439074 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041 (Bit Score: 44; Significance: 3e-16; HSPs: 3)
Name: scaffold0041
Description:
Target: scaffold0041; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 103 - 166
Target Start/End: Original strand, 54933 - 54996
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaaca |
166 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| |||| |
|
|
| T |
54933 |
aaaaattcatgatttcaacttcaacaaaaaccacataatcaaacctttaaatctataattaaca |
54996 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 145
Target Start/End: Complemental strand, 955 - 913
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaa |
145 |
Q |
| |
|
||||||| |||||||||||||||||||||| |||||||||||| |
|
|
| T |
955 |
aaaaattaatcatttcaacttcaacaaaaatcacataatcaaa |
913 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 153
Target Start/End: Original strand, 841 - 891
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaa |
153 |
Q |
| |
|
||||||| ||| |||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
841 |
aaaaattaatcttttcaacttcaacaaaaataacataatcaaacccttaaa |
891 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0034 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0034
Description:
Target: scaffold0034; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 102 - 187
Target Start/End: Original strand, 98325 - 98410
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccacaacaatcttccaaaatc |
187 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||| |||| ||||| |||||| |||||||| || ||| | ||||||| |
|
|
| T |
98325 |
caaaaattcatcatttcaacttcaacaaaaaccacaaaattaaacatttaaatttataattaacaccaccaccatcattcaaaatc |
98410 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0065 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0065
Description:
Target: scaffold0065; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 144
Target Start/End: Original strand, 35638 - 35680
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaa |
144 |
Q |
| |
|
||||||| ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
35638 |
caaaaatccatcatttcaacttcaacaaaaatcacataatcaa |
35680 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 187
Target Start/End: Complemental strand, 12365865 - 12365780
Alignment:
| Q |
102 |
caaaaattcatcatttcaacttcaacaaaaaccacataatcaaactcttaaaactataatcaacaccacaacaatcttccaaaatc |
187 |
Q |
| |
|
|||||||| |||||| ||||||||||||||||| |||||||||| ||||| |||||| |||||||| || ||| | ||||||| |
|
|
| T |
12365865 |
caaaaattgatcattaaaacttcaacaaaaaccatataatcaaacctttaaatttataattaacaccaccaccatcattcaaaatc |
12365780 |
T |
 |
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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 135
Target Start/End: Complemental strand, 145686 - 145654
Alignment:
| Q |
103 |
aaaaattcatcatttcaacttcaacaaaaacca |
135 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |
|
|
| T |
145686 |
aaaaattcatcatttcaacttcatcaaaaacca |
145654 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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