View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20573_high_71 (Length: 213)
Name: NF20573_high_71
Description: NF20573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20573_high_71 |
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Alignment Details
Target: chr6 (Bit Score: 149; Significance: 7e-79; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 19 - 181
Target Start/End: Original strand, 31423150 - 31423309
Alignment:
| Q |
19 |
atttcaatcttgatagattcttggcaaatttctatcccaaaaaattagtgaaaaattattcacgtgaatgtgttaatttcttctatcaagttccacacat |
118 |
Q |
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| T |
31423150 |
atttcaatcttgatagattcttggcaaatttctatcccaaaaaattagtgaaaaattattcacgtgaatgtgttaatttcttctat---gttccacacat |
31423246 |
T |
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| Q |
119 |
ggatcaactaggatgcccatgtcttgtaggacctacggccacaccaattttatcaacatgttc |
181 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31423247 |
ggatcaactaggatgcccatgtcttgtaggacctacggccacaccaattttatcaacatgttc |
31423309 |
T |
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