View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20573_high_74 (Length: 201)
Name: NF20573_high_74
Description: NF20573
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20573_high_74 |
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Alignment Details
Target: chr3 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 24 - 182
Target Start/End: Original strand, 10797318 - 10797476
Alignment:
| Q |
24 |
tccctggaaagccgcctccatttccagctgagaaagaagtggaaaccggtgaatgaatcaaatgatttggcatgaaaatgggtgaagaggcagatgaatg |
123 |
Q |
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| T |
10797318 |
tccctggaaagccgcctccatttccagctgagaaagaagtggaaaccggagaatgaatcaaatgatttggcatgaaaatgggtgcagaggcagaggaatg |
10797417 |
T |
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| Q |
124 |
attgagcttggaagagaagagtgtgaaaacttcatggcgggctgtgatgatgtagcttg |
182 |
Q |
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| T |
10797418 |
attgagcttggaagagaagagtgtgaaaacttcatggcgggctgtgatgatgtagcttg |
10797476 |
T |
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