View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20575_low_11 (Length: 254)
Name: NF20575_low_11
Description: NF20575
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20575_low_11 |
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Alignment Details
Target: chr6 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 2 - 236
Target Start/End: Original strand, 586466 - 586700
Alignment:
| Q |
2 |
gggatgcaaccattgaatgcttgtttctagcaattaaggtttagctatgaagcacgacactgacaccaaacacagacaatgtcaatatcgatagtaatcc |
101 |
Q |
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| T |
586466 |
gggatgcaaccattgaatgcttgtttctagcaattaaggtttagctatgaagcacgacactgacaccaaacacagacaatgtcaatatcgatagtaatcc |
586565 |
T |
|
| Q |
102 |
gagaatatggaattattgagtgtaactgcatgtgtctgtgttggactcatacacatgtcgaatatcggctacatggacaatatgaagtttttgctgacaa |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
586566 |
gagaatatggaattattgagtgtaactgcatgtgtctgtgttggactcatacacatgtcgaatatcggctacatggacaatatgaagtttttgctgacaa |
586665 |
T |
|
| Q |
202 |
cggtgaacgtctgggaacttatcgaggccataatg |
236 |
Q |
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|||||||||||||||||||||| |||||||||||| |
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| T |
586666 |
cggtgaacgtctgggaacttattgaggccataatg |
586700 |
T |
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