View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20577_high_9 (Length: 239)
Name: NF20577_high_9
Description: NF20577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20577_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 5465115 - 5465341
Alignment:
| Q |
1 |
tcatcaaaacttctaacaaacttaaagtgtaaaatgatgacacacaatgcttcttgaaattagctattaggtaaacccaaaacaaagtaaaattgaagac |
100 |
Q |
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| T |
5465115 |
tcatcaaaacttctaacaaacttaaagtgtaaaatgatgacacacaatgcttcttgaaattagctattaggtaaacccaaaacaaagtaaaattgaagac |
5465214 |
T |
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| Q |
101 |
tccaagtactgacttaaaatgttgtaacaaggcttattgttgttatttttcaatccaaaaaccaaaagaaacttatgttgttattttcaatccacacttt |
200 |
Q |
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| T |
5465215 |
tcaaagtactgacttaaaatgttgtaacaaggcttattgttgttatttttcaatccaaaaaccaaaagaaacttatgttgttattttcaatccacacttt |
5465314 |
T |
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| Q |
201 |
catacattcagatcattggtggtgatg |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
5465315 |
catacattcagatcattggtggtgatg |
5465341 |
T |
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