View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20577_low_1 (Length: 626)
Name: NF20577_low_1
Description: NF20577
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20577_low_1 |
 | |
|
| [»] scaffold0041 (4 HSPs) |
| | |
|
| [»] scaffold0645 (2 HSPs) |
| | |
|
| [»] scaffold0007 (1 HSPs) |
| | |
|
| [»] scaffold0248 (2 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 437; Significance: 0; HSPs: 8)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 437; E-Value: 0
Query Start/End: Original strand, 1 - 604
Target Start/End: Complemental strand, 29533121 - 29532516
Alignment:
| Q |
1 |
tcatcaaattaattagttttaggttttttctaaattgctttgggaaagaggtgggtaaac---ccatcttgacgtggcatcactataacatggacaacag |
97 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
29533121 |
tcatcaaattaattagttttaggttttttctaaattaccttgggaaagaggtgggtaaactgcctatcttgacgtgacatcactataacatggacaacag |
29533022 |
T |
|
| Q |
98 |
taatccacaatataaaatggatgaggagatgggtttgatatattgacccggtatacttttgttgttagcagattgactcattaattaattttcnnnnnnn |
197 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |
|
|
| T |
29533021 |
taatccacaatataaaatggacgaggagatgggtttgatatattgacccggtatacttttgttattagcagattgacccattaattaatttttaaaaaga |
29532922 |
T |
|
| Q |
198 |
nngttccagattattttcttcttcttcg--taactgttttcttctccaatatcaaataactgctttcttcttctatgttttcttttagtttttcaatcca |
295 |
Q |
| |
|
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
29532921 |
aatttccagattattttcttcttctctgcataactgttttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaatcca |
29532822 |
T |
|
| Q |
296 |
accatttcttccttcaatccattcataatttgggaacaaaaattgattcatatctatcggacgaaactctctcattcaacttaatctgtgttttcatctt |
395 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
29532821 |
accatttcttccttcaatccattcataatttgggaacaaaaattgattc--atctatccgacgaaactctctcattcaacttaatttgtgttttcatctt |
29532724 |
T |
|
| Q |
396 |
tcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatccatcgtatttactctc |
495 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29532723 |
tcaatttttcaacccaaccattacttccttcaatccattcgtaatttg--ggaaaaaaaatgattcatcaacatcaaattcatccatcgtatttactctc |
29532626 |
T |
|
| Q |
496 |
cacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaagcccatccctaa-tttttttcgtttcactctct |
594 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
29532625 |
cacccataccgtttcttctctctcgtctttggggaaaatgccctaagaaactcatctctgtcacgaaacccatccctaagtttttttcgtttcactctct |
29532526 |
T |
|
| Q |
595 |
cacggttcta |
604 |
Q |
| |
|
|||||||||| |
|
|
| T |
29532525 |
cacggttcta |
29532516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 349; E-Value: 0
Query Start/End: Original strand, 22 - 562
Target Start/End: Complemental strand, 46044777 - 46044239
Alignment:
| Q |
22 |
ggttttttctaaattgctttgggaaagaggtgggtaaac---ccatcttgacgtggcatcactataacatggacaacagtaatccacaatataaaatgga |
118 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||| |||||||||||||||| |||||||| |||||||||| |||||||||||| |||||||| |
|
|
| T |
46044777 |
ggttttttctaacttgccttgggaaagaggtgggtaaactgcccatcttgacgtggcagcactataatatggacaacaataatccacaataaaaaatgga |
46044678 |
T |
|
| Q |
119 |
tgaggagatgggtttgatatattgacccggtatacttttgttgttagcagattgactcattaattaattttcnnnnnnnnngttccagattattttcttc |
218 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||| |
|
|
| T |
46044677 |
cgaggagatgagtttgatatattgacccggtatacttttgttattagcagattgacccattaattaattttcaaaaaaaaaaatccagattattttctta |
46044578 |
T |
|
| Q |
219 |
ttcttcgtaactgttttcttctccaatatcaaataactgctttcttcttctatgttttcttttagtttttcaatccaaccatttcttccttcaatccatt |
318 |
Q |
| |
|
|||| | |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
46044577 |
ttctgcataactgctttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatccatt |
46044478 |
T |
|
| Q |
319 |
cataatttgggaacaaaaattgattcatatctatcggacgaaactctctcattcaacttaatctgtgttttcatctttcaatttttcaacccaaccatta |
418 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| |
|
|
| T |
46044477 |
cataatttgggaacaaaaattgattc--atctatccgacaaaactctctcattcaacttattctgcattttcatctttcaatttttcaacccaatcatta |
46044380 |
T |
|
| Q |
419 |
cttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatccatcgtatttactctccacccataccgtttcttctctct |
518 |
Q |
| |
|
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
46044379 |
cttccttcaatccatttgtaatttgga---aaaaaattgattcatcaacatcaaattcatccatcgtatttactctccactcataccgtttcttctctct |
46044283 |
T |
|
| Q |
519 |
catctttggggaaaatgccctaagaaactcatctctgtcacgaa |
562 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
46044282 |
catctttggggaaaatgccctaagaaactcatctctgttacgaa |
46044239 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 22 - 335
Target Start/End: Complemental strand, 11560509 - 11560193
Alignment:
| Q |
22 |
ggttttttctaaattgctttgggaaagaggtgggtaaac---ccatcttgacgtggcatcactataacatggacaacagtaatccacaatataaaatgga |
118 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
11560509 |
ggttttttctaaattaccttgggaaagaggtgggtaaactgcccatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgga |
11560410 |
T |
|
| Q |
119 |
tgaggagatgggtttgatatattgacccggtatacttttgttgttagcagattgactcattaattaattttcnnnnnnnnngttccagattattttcttc |
218 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||| ||| |||| ||||||||| |
|
|
| T |
11560409 |
cgaggagatgggtttgatatattgaccaggtatacttttgttattagcagattgacccattaattaattttcaaaaaaaaaattctagataattttcttc |
11560310 |
T |
|
| Q |
219 |
ttcttcgtaactgttttcttctccaatatcaaataactgctttcttcttctatgttttcttttagtttttcaatccaaccatttcttccttcaatccatt |
318 |
Q |
| |
|
|||| | |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
11560309 |
ttctgcataactgctttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatccatt |
11560210 |
T |
|
| Q |
319 |
cataatttgggaacaaa |
335 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
11560209 |
cataatttgggaacaaa |
11560193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 380 - 603
Target Start/End: Original strand, 11537017 - 11537238
Alignment:
| Q |
380 |
tctgtgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatc |
479 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
11537017 |
tctgcgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttgg---gaaaaaattgattcatcaacatcaaattcatc |
11537113 |
T |
|
| Q |
480 |
catcgtatttactctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaagcccatccctaa-tttt |
578 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||| |||| |
|
|
| T |
11537114 |
tatcgtatttactctccactcataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctttgtcacgaaactcatccctaagtttt |
11537213 |
T |
|
| Q |
579 |
tttcgtttcactctctcacggttct |
603 |
Q |
| |
|
|||||||||||| |||||||||||| |
|
|
| T |
11537214 |
tttcgtttcactttctcacggttct |
11537238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 380 - 559
Target Start/End: Original strand, 46042740 - 46042916
Alignment:
| Q |
380 |
tctgtgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatc |
479 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
46042740 |
tctgcgttttcatctttcaatttttcaacctaaccattacttccttcaatctattcgtaatttgg---gaaaaaattgattcatcaacatcaaattcatc |
46042836 |
T |
|
| Q |
480 |
catcgtatttactctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcac |
559 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46042837 |
catcgtatttactctccactcataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcac |
46042916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 11537037 - 11537097
Alignment:
| Q |
284 |
tttttcaatccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcat |
346 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
11537037 |
tttttcaacccaaccattacttccttcaatccattcgtaatttggga--aaaaattgattcat |
11537097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 444
Target Start/End: Complemental strand, 11560244 - 11560200
Alignment:
| Q |
400 |
tttttcaacccaaccattacttccttcaatccattcgtaatttgg |
444 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
11560244 |
tttttcaacccaaccatttcttccttcaatccattcataatttgg |
11560200 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 46042760 - 46042820
Alignment:
| Q |
284 |
tttttcaatccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcat |
346 |
Q |
| |
|
|||||||| | ||||||| |||||||||||| |||| |||||||||| |||||||||||||| |
|
|
| T |
46042760 |
tttttcaacctaaccattacttccttcaatctattcgtaatttggga--aaaaattgattcat |
46042820 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 395; Significance: 0; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 22 - 602
Target Start/End: Complemental strand, 8206129 - 8205550
Alignment:
| Q |
22 |
ggttttttctaaattgctttgggaaagaggtgggtaaac---ccatcttgacgtggcatcactataacatggacaacagtaatccacaatataaaatgga |
118 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| ||||| || |
|
|
| T |
8206129 |
ggttttttctaaattgccttgggaaagaggtgggtaaactgcccatcttgacgtggcatcgctataacatggacaacagtaatccacaataaaaaattga |
8206030 |
T |
|
| Q |
119 |
tgaggagatgggtttgatatattgacccggtatacttttgttgttagcagattgactcattaattaattttcnnnnnnnnngttccagattattttcttc |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | ||||||||||| |||||||| ||||| |||||||||||||||||| |
|
|
| T |
8206029 |
cgaggagatgggtttgatatattgacccggtatacttttgttatcagcagattgacccattaattgattttaaaaaaaaaaattccagattattttcttc |
8205930 |
T |
|
| Q |
219 |
ttcttcgtaactgttttcttctccaatatcaaataactgctttcttcttctatgttttcttttagtttttcaatccaaccatttcttccttcaatccatt |
318 |
Q |
| |
|
|||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| |
|
|
| T |
8205929 |
ttctgcataactgttttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaactatttcttccttcaatccatt |
8205830 |
T |
|
| Q |
319 |
cataatttgggaacaaaaattgattcatatctatcggacgaaactctctcattcaacttaatctgtgttttcatctttcaatttttcaacccaaccatta |
418 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
8205829 |
cataatttgggaacaaaaattgattc--atctatccgacgaaactctctcattcaacttattctgcgttttcatctttcaatttttcaacccaaccatta |
8205732 |
T |
|
| Q |
419 |
cttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatccatcgtatttactctccacccataccgtttcttctctct |
518 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
8205731 |
cttccttcaatccattcgtaatttgg---gaaaaaattgattcatcaacatcaaattcatccatcgtatttactcttcacttataccgtttcttctctct |
8205635 |
T |
|
| Q |
519 |
catctttggggaaaatgccctaagaaactcatctctgtcacgaagcccatccctaa-tttttttcgtttcactctctcacggttc |
602 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
8205634 |
catctttggggaaaatgccctaagaaactcatctctgtcacgaaacccatccctaagtttttttcgtttcactctctcacggttc |
8205550 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 22 - 604
Target Start/End: Original strand, 22972829 - 22973416
Alignment:
| Q |
22 |
ggttttttctaaattgctttgggaaagaggtgggtaaac---ccatcttgacgtggcatcactataacatggacaacagtaatccacaatataaaatgga |
118 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
22972829 |
ggttttttctaaattgccttgggaaagaggtgggtaaactgcccatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgga |
22972928 |
T |
|
| Q |
119 |
tgaggagatgggtttgatatattgacccggtatacttttgttgttagcagattgactcattaattaattttcnnnnnnnnng------ttccagattatt |
212 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||| |||||| ||||| ||||||||||||||| |||||||||||| |
|
|
| T |
22972929 |
cgaggagatgggtttgatatattgatccggtatacttttgttattagcatattgatccattaattaattttcaaaaaaaaaaaaaaaattccagattatt |
22973028 |
T |
|
| Q |
213 |
ttcttcttcttcgtaactgttttcttctccaatatcaaataactgctttcttcttctatgttttcttttagtttttcaatccaaccatttcttccttcaa |
312 |
Q |
| |
|
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
22973029 |
ttcttcttctgcataactgttttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaa |
22973128 |
T |
|
| Q |
313 |
tccattcataatttgggaacaaaaattgattcatatctatcggacgaaactctctcattcaacttaatctgtgttttcatctttcaatttttcaacccaa |
412 |
Q |
| |
|
| |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||| ||||||||||| |||||||||||||||| |
|
|
| T |
22973129 |
ttcattcataatttgggaacaaaaattgattc--atctatccgacgaaactctctcattcaacttattctgcgttttcatcttccaatttttcaacccaa |
22973226 |
T |
|
| Q |
413 |
ccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatccatcgtatttactctccacccataccgtttctt |
512 |
Q |
| |
|
||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
22973227 |
cca-tacttccttcaatccattcgtaatttgg---gaaaaaattgattcatcaacatcaaattcatccatcgtatttactctccactcataccgtttctt |
22973322 |
T |
|
| Q |
513 |
ctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaagcccatccctaa--tttttttcgtttcactctctcacggttcta |
604 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
22973323 |
ctctctcatctttggggaaaatatcctaagaaactcatctctgtcacgaaacccatccctaagttttttttcgtttcactctctcacagttcta |
22973416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 21 - 346
Target Start/End: Original strand, 38082674 - 38083003
Alignment:
| Q |
21 |
aggttttttctaaattgctttgggaaagaggtgggtaaac---ccatcttgacgtggcatcactataacatggacaacagtaatccacaatataaaatgg |
117 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||| |
|
|
| T |
38082674 |
aggttttttctaaattgccttgggaaagaggtgggtaaactgcccatcttgacgtggcatcactataacatggataacagtaatccacaataaaaaatgg |
38082773 |
T |
|
| Q |
118 |
atgaggagatgggtttgatatattgacccggtatac-ttttgttgttagcagattgactcattaattaattttcnnnnnnnnngttccagattattttct |
216 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
38082774 |
acgaggagatgggtttgatatattgacccggtatactttttgttattagcagattgacccattaattaatttttaaaaaaaaatttccagattattttct |
38082873 |
T |
|
| Q |
217 |
tcttcttcgtaactgttttcttctccaatatcaaataactgctttcttcttctatgttttcttttagtttttcaatccaaccatttcttccttcaatcca |
316 |
Q |
| |
|
|||||| | |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
38082874 |
tcttctgcataactgctttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatcca |
38082973 |
T |
|
| Q |
317 |
ttcataatttgggaacaaaaattgattcat |
346 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
38082974 |
ttcataatttgggaacaaaaattgattcat |
38083003 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 380 - 604
Target Start/End: Complemental strand, 22974394 - 22974172
Alignment:
| Q |
380 |
tctgtgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatc |
479 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
22974394 |
tctgcgttttcatctttcaatttttcaacccaactatttcttccttcaatccattcgtaatttgga---aaaaaattgattcatcaacatcaaattcatc |
22974298 |
T |
|
| Q |
480 |
catcgtatttactctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaagcccatccct-aatttt |
578 |
Q |
| |
|
||| ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
22974297 |
catggtatttactctccactcatatcgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaaacccatccctaaatttt |
22974198 |
T |
|
| Q |
579 |
tttcgtttcactctctcacggttcta |
604 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
22974197 |
tttcgtttcactctctcacggttcta |
22974172 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 380 - 604
Target Start/End: Original strand, 8203936 - 8204152
Alignment:
| Q |
380 |
tctgtgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatc |
479 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
8203936 |
tctgcgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttgg---gaaaaaattgattcatc------aaattcatc |
8204026 |
T |
|
| Q |
480 |
catcgtatttactctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaagcccatccctaa-tttt |
578 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
8204027 |
catcgtatttactctccactcataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaaacccatccctaagtttt |
8204126 |
T |
|
| Q |
579 |
tttcgtttcactctctcacggttcta |
604 |
Q |
| |
|
|||||||||||||||| ||||||||| |
|
|
| T |
8204127 |
tttcgtttcactctctaacggttcta |
8204152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 380 - 562
Target Start/End: Complemental strand, 38083968 - 38083789
Alignment:
| Q |
380 |
tctgtgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatc |
479 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
38083968 |
tctgcgttttcatctttcaatttttcaacctaaccgttacttccttcaatccattcgtaatttgga---aaaaaattgattcatcaacatcaaattcatc |
38083872 |
T |
|
| Q |
480 |
catcgtatttactctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
562 |
Q |
| |
|
||||||||||||||||||| |||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
38083871 |
catcgtatttactctccactcatatcatttcttctctctcatctttggagaaaatgccctaagaaactcatctctgtcacgaa |
38083789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 400 - 562
Target Start/End: Original strand, 38082941 - 38083102
Alignment:
| Q |
400 |
tttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatccatcgtatttactctccacc |
499 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38082941 |
tttttcaacccaaccatttcttccttcaatccattcataatttgg-gaacaaaaattgattcatcaacatcaaattcatccatcgtatttactctccact |
38083039 |
T |
|
| Q |
500 |
cataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
562 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38083040 |
cataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
38083102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 8203956 - 8204016
Alignment:
| Q |
284 |
tttttcaatccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcat |
346 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
8203956 |
tttttcaacccaaccattacttccttcaatccattcgtaatttggga--aaaaattgattcat |
8204016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 22974374 - 22974314
Alignment:
| Q |
284 |
tttttcaatccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcat |
346 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||| |||||||| | |||||||||||||| |
|
|
| T |
22974374 |
tttttcaacccaactatttcttccttcaatccattcgtaatttgg--aaaaaaattgattcat |
22974314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 391; Significance: 0; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 22 - 604
Target Start/End: Original strand, 13432403 - 13432985
Alignment:
| Q |
22 |
ggttttttctaaattgctttgggaaagaggtgggtaaacc---catcttgacgtggcatcactataacatggacaacagtaatccacaatataaaatgga |
118 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
13432403 |
ggttttttctaaattgtcttgggaaagaggtgggtaaactgctcatcttaacgtggcatcactataacatggacaacagtaattcacaataaaaaatgga |
13432502 |
T |
|
| Q |
119 |
tgaggagatgggtttgatatattgacccggtatacttttgttgttagcagattgactcattaattaattttcnnnnnnnnngttccagattattttcttc |
218 |
Q |
| |
|
||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||| ||||| |||||||||||| |
|
|
| T |
13432503 |
cgaggagatgagtttgatatattgacccagtatacttttgttattagcagattgacccattaattaatttttaaaaaaaaaattccaaattattttcttc |
13432602 |
T |
|
| Q |
219 |
ttcttcgtaactgttttcttctccaatatcaaataactgctttcttcttctatgttttcttttagtttttcaatccaaccatttcttccttcaatccatt |
318 |
Q |
| |
|
|||| | ||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
13432603 |
ttctgcataactgttttcttcttcaatatcaaataactgctttcttcttctacgttttcttttagtttttcaatccaaccatttcttccttcaatccatt |
13432702 |
T |
|
| Q |
319 |
cataatttgggaacaaaaattgattcatatctatcggacgaaactctctcattcaacttaatctgtgttttcatctttcaatttttcaacccaaccatta |
418 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
13432703 |
cataatttgggaacaaaaattgattc--atctatccgacgaaactctctcattcaactaattctgcgttttcatctttcaatttttcaacccaaccatta |
13432800 |
T |
|
| Q |
419 |
cttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatccatcgtatttactctccacccataccgtttcttctctct |
518 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
13432801 |
cttccttcaatccattcgtaatttgg---taaaaaattgattcatcaacatcaaattcatccatcgtatttactctccactcataccgtttcttctctct |
13432897 |
T |
|
| Q |
519 |
catctttggggaaaatgccctaagaaactcatctctgtcacgaagcccatccctaa--tttttttcgtttcactctctcacggttcta |
604 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
13432898 |
catctttggggaaaatgccctaagaaactcatctctgtcacgaaacccatccctaagttttttttcgtttcactctctcacggttcta |
13432985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 380 - 595
Target Start/End: Complemental strand, 13434660 - 13434447
Alignment:
| Q |
380 |
tctgtgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatc |
479 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
13434660 |
tctgcgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttgg---gaaaaaattgattcatcaacatcaaattcatc |
13434564 |
T |
|
| Q |
480 |
catcgtatttactctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaagcccatccctaa-tttt |
578 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||| |
|
|
| T |
13434563 |
catcgtatttactctccactcataccgtttattctctttcatctttggggaaaatgccctaagaaactcatctctgtcacgaaactcatccctaagtttt |
13434464 |
T |
|
| Q |
579 |
tttcgtttcactctctc |
595 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
13434463 |
tttcgtttcactctctc |
13434447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 13434640 - 13434580
Alignment:
| Q |
284 |
tttttcaatccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcat |
346 |
Q |
| |
|
|||||||| ||||||||| ||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
13434640 |
tttttcaacccaaccattacttccttcaatccattcgtaatttggga--aaaaattgattcat |
13434580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 326; Significance: 0; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 21 - 562
Target Start/End: Complemental strand, 19880425 - 19879880
Alignment:
| Q |
21 |
aggttttttctaaattgctttgggaaagaggtgggtaaaccc---atcttgacgtggcatcactataacatggacaacagtaatccacaatataaaatgg |
117 |
Q |
| |
|
||||||||||||| |||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||| ||||||| |
|
|
| T |
19880425 |
aggttttttctaacttgccttgggaatgaggtgggtaaaccgccaatcttgacgtggcatcactataacatggacaacagcaatctacaataaaaaatgg |
19880326 |
T |
|
| Q |
118 |
atgaggagatgggtttgatatattgacccggtatacttttgttgttagcagattgactcattaattaattttcnnnnnnnnngttccagattattttctt |
217 |
Q |
| |
|
| ||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||| |||| ||||||||||||||||| |
|
|
| T |
19880325 |
acgaggagatgggtttgatatattgacccagtatacttttgttattagcagattgacccattaattaaatttcaaaaaaaaaattccagattattttctt |
19880226 |
T |
|
| Q |
218 |
cttcttcgtaactgt------tttcttctccaatatcaaataactgctttcttcttctatgttttcttttagtttttcaatccaaccatttcttccttca |
311 |
Q |
| |
|
||||| | ||||| | |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
19880225 |
cttctgcataactataactgctttcttctccaatatcaaataattgctttcttcttctaccttttcttttagtttttcaacccaaccatttcttccttca |
19880126 |
T |
|
| Q |
312 |
atccattcataatttgggaacaaaaattgattcatatctatcggacgaaactctctcattcaacttaatctgtgttttcatctttcaatttttcaaccca |
411 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
19880125 |
atccattcataatttgggaacaaaaattgattc--atctatccgacaaaactctctcattcaacttattctacgttttcatctttcaatttttcaaccca |
19880028 |
T |
|
| Q |
412 |
accattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatccatcgtatttactctccacccataccgtttct |
511 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
19880027 |
accattgcttccttcaatccattcgtaatttgg---gaaaaaattgattcatcaacatcaaattcatccatcgtatttactctccactcataccgtttct |
19879931 |
T |
|
| Q |
512 |
tctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
562 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
19879930 |
tctctctcatctttggggaaaatgccgtaagaaactcatctctgtcacgaa |
19879880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 380 - 562
Target Start/End: Original strand, 19878080 - 19878259
Alignment:
| Q |
380 |
tctgtgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatc |
479 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
19878080 |
tctgcgttttcatctttcaatttttcaacctaaccattacttccttcaatccattcgtaatttgg---gaaaaaattgattcatcaacatcaaattcatc |
19878176 |
T |
|
| Q |
480 |
catcgtatttactctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
562 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
19878177 |
catcgtatttactctccactcataccgtttcttctctctcatctttggggaaaatgccgtaagaaactcatctctgtcacgaa |
19878259 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 19878100 - 19878160
Alignment:
| Q |
284 |
tttttcaatccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcat |
346 |
Q |
| |
|
|||||||| | ||||||| ||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
19878100 |
tttttcaacctaaccattacttccttcaatccattcgtaatttggga--aaaaattgattcat |
19878160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 304; Significance: 1e-171; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 111 - 562
Target Start/End: Complemental strand, 32257971 - 32257526
Alignment:
| Q |
111 |
aaaatggatgaggagatgggtttgatatattgacccggtatacttttgttgttagcagattgactcattaattaattttcnnnnnnnnngttccagatta |
210 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
32257971 |
aaaatggacgaggagatgggtttgatatattgacccggtaaacttttgttattagcagattgacccattaattaatttaaaaaaaaaaaattccagatta |
32257872 |
T |
|
| Q |
211 |
ttttcttcttcttcgtaactgttttcttctccaatatcaaataactgctttcttcttctatgttttcttttagtttttcaatccaaccatttcttccttc |
310 |
Q |
| |
|
|||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
32257871 |
ttttcttcttctacataactgctttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttc |
32257772 |
T |
|
| Q |
311 |
aatccattcataatttgggaacaaaaattgattcatatctatcggacgaaactctctcattcaacttaatctgtgttttcatctttcaatttttcaaccc |
410 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||| |||||||||||||||||||||||||| |
|
|
| T |
32257771 |
aatccattcataatttgggaacaaaaattgattc--atctatccgacaaaactctctcattcaacttattctgcgttttcatctttcaatttttcaaccc |
32257674 |
T |
|
| Q |
411 |
aaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatccatcgtatttactctccacccataccgtttc |
510 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
32257673 |
aaccattacttccttcaatccattcgtaatttgg----gaaaaattgattcatcaacatcaaattcatccatcgtatttactctccactcatactgtttc |
32257578 |
T |
|
| Q |
511 |
ttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
562 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
32257577 |
ttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
32257526 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 21 - 346
Target Start/End: Complemental strand, 40908027 - 40907699
Alignment:
| Q |
21 |
aggttttttctaaattgctttgggaaagaggtgggtaaac---ccatcttgacgtggcatcactataacatggacaacagtaatccacaatataaaatgg |
117 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
40908027 |
aggttttttctaaattgccttgggaaagaggtgggtaaactgcccatcttgacgtggcatcactataacatggacagcagtaatccacaataaaaaatgg |
40907928 |
T |
|
| Q |
118 |
atgaggagatgggtttgatatattgacccggtatacttttgttgttagcagattgactcattaattaattttcnnnnnnnnngttccagattattttctt |
217 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||| || |||||||||||||| |
|
|
| T |
40907927 |
acgaggagatgggtttgatatattgacccggtatacttttgttattagcagattaatccattaattaattttcaaaaaaaaattttcagattattttctt |
40907828 |
T |
|
| Q |
218 |
cttcttcgtaactgttttcttctccaatatcaaataactgctttcttcttctatgttttcttttagtttttcaatccaaccatttcttccttcaatccat |
317 |
Q |
| |
|
||||| | |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
40907827 |
cttctgcataactgctttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttattccttcaatccat |
40907728 |
T |
|
| Q |
318 |
tcataatttgggaacaaaaattgattcat |
346 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
40907727 |
tcataatttgggaacaaaaattgattcat |
40907699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 380 - 562
Target Start/End: Original strand, 40906710 - 40906889
Alignment:
| Q |
380 |
tctgtgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatc |
479 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
40906710 |
tctgcgttttcatctttcaatttttcaacctaaccattacttccttcaatccattcgtaatttgg---gaaaaaattgattcatcaacatcaaattcatc |
40906806 |
T |
|
| Q |
480 |
catcgtatttactctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
562 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40906807 |
catcgtatttactctccactcatactgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
40906889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 380 - 562
Target Start/End: Original strand, 32256560 - 32256739
Alignment:
| Q |
380 |
tctgtgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatc |
479 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |
|
|
| T |
32256560 |
tctgcgttttcatctttcaatttttcaacctaaccattacttccttcaatctattcgtaatttg---cgaaaaaattgattcatcaacatcaaattcatc |
32256656 |
T |
|
| Q |
480 |
catcgtatttactctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
562 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
32256657 |
catcgtatttactctccactcataccgtttcttctctctcatctttgggaaaaatgccctaaaaaactcatctctgtcacgaa |
32256739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 400 - 562
Target Start/End: Complemental strand, 40907761 - 40907600
Alignment:
| Q |
400 |
tttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatccatcgtatttactctccacc |
499 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40907761 |
tttttcaacccaaccatttattccttcaatccattcataatttgg-gaacaaaaattgattcatcaacatcaaattcatccatcgtatttactctccact |
40907663 |
T |
|
| Q |
500 |
cataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
562 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
40907662 |
cataccatttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
40907600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 346
Target Start/End: Original strand, 40906730 - 40906790
Alignment:
| Q |
284 |
tttttcaatccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcat |
346 |
Q |
| |
|
|||||||| | ||||||| ||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
40906730 |
tttttcaacctaaccattacttccttcaatccattcgtaatttggga--aaaaattgattcat |
40906790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041 (Bit Score: 224; Significance: 1e-123; HSPs: 4)
Name: scaffold0041
Description:
Target: scaffold0041; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 21 - 346
Target Start/End: Original strand, 65067 - 65395
Alignment:
| Q |
21 |
aggttttttctaaattgctttgggaaagaggtgggtaaac---ccatcttgacgtggcatcactataacatggacaacagtaatccacaatataaaatgg |
117 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||| |
|
|
| T |
65067 |
aggttttttctaaattgccttgggaaagaggtgggtaaactgcccatcttgacgtggcatcactataacatggacagcagtaatccacaataaaaaatgg |
65166 |
T |
|
| Q |
118 |
atgaggagatgggtttgatatattgacccggtatacttttgttgttagcagattgactcattaattaattttcnnnnnnnnngttccagattattttctt |
217 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||| || |||||||||||||| |
|
|
| T |
65167 |
acgaggagatgggtttgatatattgacccggtatacttttgttattagcagattaatccattaattaattttcaaaaaaaaattttcagattattttctt |
65266 |
T |
|
| Q |
218 |
cttcttcgtaactgttttcttctccaatatcaaataactgctttcttcttctatgttttcttttagtttttcaatccaaccatttcttccttcaatccat |
317 |
Q |
| |
|
||||| | |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
65267 |
cttctgcataactgctttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttattccttcaatccat |
65366 |
T |
|
| Q |
318 |
tcataatttgggaacaaaaattgattcat |
346 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
65367 |
tcataatttgggaacaaaaattgattcat |
65395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 380 - 562
Target Start/End: Complemental strand, 43308 - 43129
Alignment:
| Q |
380 |
tctgtgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatc |
479 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
43308 |
tctgcgttttcatctttcaatttttcaacctaaccattacttccttcaatccattcgtaatttgg---gaaaaaattgattcatcaacatcaaattcatc |
43212 |
T |
|
| Q |
480 |
catcgtatttactctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
562 |
Q |
| |
|
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
43211 |
catcgtatttactctccactcatactgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
43129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041; HSP #3
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 400 - 562
Target Start/End: Original strand, 65333 - 65494
Alignment:
| Q |
400 |
tttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatccatcgtatttactctccacc |
499 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
65333 |
tttttcaacccaaccatttattccttcaatccattcataatttgg-gaacaaaaattgattcatcaacatcaaattcatccatcgtatttactctccact |
65431 |
T |
|
| Q |
500 |
cataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
562 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
65432 |
cataccatttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
65494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0041; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 43288 - 43228
Alignment:
| Q |
284 |
tttttcaatccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcat |
346 |
Q |
| |
|
|||||||| | ||||||| ||||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
43288 |
tttttcaacctaaccattacttccttcaatccattcgtaatttggga--aaaaattgattcat |
43228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0645 (Bit Score: 216; Significance: 1e-118; HSPs: 2)
Name: scaffold0645
Description:
Target: scaffold0645; HSP #1
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 22 - 335
Target Start/End: Original strand, 2186 - 2502
Alignment:
| Q |
22 |
ggttttttctaaattgctttgggaaagaggtgggtaaac---ccatcttgacgtggcatcactataacatggacaacagtaatccacaatataaaatgga |
118 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
2186 |
ggttttttctaaattaccttgggaaagaggtgggtaaactgcccatcttgacgtggcatcactataacatggacaacagtaatccacaataaaaaatgga |
2285 |
T |
|
| Q |
119 |
tgaggagatgggtttgatatattgacccggtatacttttgttgttagcagattgactcattaattaattttcnnnnnnnnngttccagattattttcttc |
218 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||||||| ||| |||| ||||||||| |
|
|
| T |
2286 |
cgaggagatgggtttgatatattgaccaggtatacttttgttattagcagattgacccattaattaattttcaaaaaaaaaattctagataattttcttc |
2385 |
T |
|
| Q |
219 |
ttcttcgtaactgttttcttctccaatatcaaataactgctttcttcttctatgttttcttttagtttttcaatccaaccatttcttccttcaatccatt |
318 |
Q |
| |
|
|||| | |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
2386 |
ttctgcataactgctttcttctccaatatcaaataactgctttcttcttctacgttttcttttagtttttcaacccaaccatttcttccttcaatccatt |
2485 |
T |
|
| Q |
319 |
cataatttgggaacaaa |
335 |
Q |
| |
|
||||||||||||||||| |
|
|
| T |
2486 |
cataatttgggaacaaa |
2502 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0645; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 400 - 444
Target Start/End: Original strand, 2451 - 2495
Alignment:
| Q |
400 |
tttttcaacccaaccattacttccttcaatccattcgtaatttgg |
444 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| |||||||| |
|
|
| T |
2451 |
tttttcaacccaaccatttcttccttcaatccattcataatttgg |
2495 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 128; Significance: 7e-66; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 380 - 562
Target Start/End: Original strand, 278312 - 278491
Alignment:
| Q |
380 |
tctgtgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatc |
479 |
Q |
| |
|
|||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
278312 |
tctgcgttttcatctttcaatttttcaacctaactattacttccttcaatccattcgtaatttgga---aaaaaattgattcatcaacatcaaattcatc |
278408 |
T |
|
| Q |
480 |
catcgtatttactctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
562 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
278409 |
catcgtatttactctccactcataccgtttcttctctctcatctttggggaaaatgccgtaagaaactcatctctgtcacgaa |
278491 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0248 (Bit Score: 125; Significance: 5e-64; HSPs: 2)
Name: scaffold0248
Description:
Target: scaffold0248; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 380 - 562
Target Start/End: Complemental strand, 15660 - 15481
Alignment:
| Q |
380 |
tctgtgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatc |
479 |
Q |
| |
|
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| |
|
|
| T |
15660 |
tctgcgttttcatctttcaatttttcaacctaaccattacttccttcaatccatttgtaatttgg---gaaaaaattgattcatcaacatcaaattcatc |
15564 |
T |
|
| Q |
480 |
catcgtatttactctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
562 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15563 |
catcgtatttactctccagtcataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtcacgaa |
15481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0248; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 346
Target Start/End: Complemental strand, 15640 - 15580
Alignment:
| Q |
284 |
tttttcaatccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcat |
346 |
Q |
| |
|
|||||||| | ||||||| |||||||||||||||| |||||||||| |||||||||||||| |
|
|
| T |
15640 |
tttttcaacctaaccattacttccttcaatccatttgtaatttggga--aaaaattgattcat |
15580 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 124; Significance: 2e-63; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 21 - 269
Target Start/End: Original strand, 42808938 - 42809192
Alignment:
| Q |
21 |
aggttttttctaaattgctttgggaaagaggtgggtaaa---cccatcttgacgtggcatcactataacatggacaacagtaatccacaatataaaatgg |
117 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
42808938 |
aggttttttctaacttgctttgggaaagaggtgggtaaattacccatcttgaggtggcatcactataacatggacaactgtaatccacaataaaaaatgg |
42809037 |
T |
|
| Q |
118 |
atgaggagatgggtttgatatattgacccggtatacttttgttgttagcagattgactcattaattaatt---ttcnnnnnnnnngttccagattatttt |
214 |
Q |
| |
|
| ||||||||| ||||||||||||||| |||||||||||||| ||||||||||||| |||||||||| | |||||||||||||| |
|
|
| T |
42809038 |
actaggagatggatttgatatattgacctggtatacttttgttattagcagattgacccattaattaactaaaaaaaaataaaaaattccagattatttt |
42809137 |
T |
|
| Q |
215 |
cttcttcttcgtaactgttttcttctccaatatcaaataactgctttcttcttct |
269 |
Q |
| |
|
|||||||| | |||||| ||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
42809138 |
cttcttctgcataactgctttcttctccaatatcaaataaccgctttcttcttct |
42809192 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 120; Significance: 4e-61; HSPs: 8)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 380 - 558
Target Start/End: Complemental strand, 17772057 - 17771882
Alignment:
| Q |
380 |
tctgtgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatc |
479 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||| |||||||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
17772057 |
tctgtgttttcatctttcaatttttcaacctaatcattactttcttcaatccatttgtaatttgga---aaaaaattgattcatcaacatcaaattcatc |
17771961 |
T |
|
| Q |
480 |
catcgtatttactctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtca |
558 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17771960 |
catcctatttactctccactcataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtca |
17771882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 392 - 558
Target Start/End: Original strand, 1533809 - 1533972
Alignment:
| Q |
392 |
tctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatccatcgtatttac |
491 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |
|
|
| T |
1533809 |
tctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttag---gaaaaaattgattcatcaacatcaaattcatccatcgtatttac |
1533905 |
T |
|
| Q |
492 |
tctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtca |
558 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1533906 |
tctccactcataccgtttgttctctctcatctttggggaaaatgccctaagaaactcatctctgtca |
1533972 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 392 - 558
Target Start/End: Original strand, 17752019 - 17752182
Alignment:
| Q |
392 |
tctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatccatcgtatttac |
491 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| |
|
|
| T |
17752019 |
tctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttag---gaaaaaattgattcatcaacatcaaattcatccatcgtatttac |
17752115 |
T |
|
| Q |
492 |
tctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtca |
558 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17752116 |
tctccactcataccgtttgttctctctcatctttggggaaaatgccctaagaaactcatctctgtca |
17752182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 380 - 558
Target Start/End: Complemental strand, 1542009 - 1541834
Alignment:
| Q |
380 |
tctgtgttttcatctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttggagnnnnnnnnntgattcatcaacatcaaattcatc |
479 |
Q |
| |
|
|||||||||||||||||||||||||||||| || |||||||| |||||||||||| |||| |||| |||||||||||||||||||||||| |
|
|
| T |
1542009 |
tctgtgttttcatctttcaatttttcaacctaatcattactttcttcaatccatttgtaaattgg---gaaaaaattgattcatcaacatcaaattcatc |
1541913 |
T |
|
| Q |
480 |
catcgtatttactctccacccataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtca |
558 |
Q |
| |
|
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1541912 |
catcctatttactctccactcataccgtttcttctctctcatctttggggaaaatgccctaagaaactcatctctgtca |
1541834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 22 - 185
Target Start/End: Original strand, 17751797 - 17751963
Alignment:
| Q |
22 |
ggttttttctaaattgctttgggaaagaggtgggtaaac---ccatcttgacgtggcatcactataacatggacaacagtaatccacaatataaaatgga |
118 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||| | |||||||| |
|
|
| T |
17751797 |
ggttttttctaacttgccttgggaaagaggtgggtaaactacccatcttgacgtggcatcactataacatggacaactgtaatctacaccaaaaaatgga |
17751896 |
T |
|
| Q |
119 |
tgaggagatgggtttgatatattgacccggtatacttttgttgttagcagattgactcattaattaa |
185 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
17751897 |
ttaggagatgggtttgatatattgacccggtatacttttgttattagcagattgacccattaattaa |
17751963 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 22 - 185
Target Start/End: Original strand, 1533587 - 1533752
Alignment:
| Q |
22 |
ggttttttctaaattgctttgggaaagaggtgggtaaac---ccatcttgacgtggcatcactataacatggacaacagtaatccacaatataaaatgga |
118 |
Q |
| |
|
|||||||||||| |||| ||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||| ||| | |||||||| |
|
|
| T |
1533587 |
ggttttttctaacttgccttgggaaagaggtgggtaaactacccatcttgacgtggcatcac-ataacatggacaactgtaatctacaccaaaaaatgga |
1533685 |
T |
|
| Q |
119 |
tgaggagatgggtttgatatattgacccggtatacttttgttgttagcagattgactcattaattaa |
185 |
Q |
| |
|
| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||| |||||||||| |
|
|
| T |
1533686 |
ttaggagatggatttgatatattgacccggtatacttttgttattagcagattgacccattaattaa |
1533752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 256 - 346
Target Start/End: Original strand, 17751999 - 17752087
Alignment:
| Q |
256 |
tgctttcttcttctatgttttcttttagtttttcaatccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcat |
346 |
Q |
| |
|
||||||||||||||| |||||||| | |||||||| ||||||||| ||||||||||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
17751999 |
tgctttcttcttctaccttttctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttagga--aaaaattgattcat |
17752087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 257 - 346
Target Start/End: Original strand, 1533790 - 1533877
Alignment:
| Q |
257 |
gctttcttcttctatgttttcttttagtttttcaatccaaccatttcttccttcaatccattcataatttgggaacaaaaattgattcat |
346 |
Q |
| |
|
|||||||||||||| |||||||| | |||||||| ||||||||| ||||||||||||||||| |||||| ||| |||||||||||||| |
|
|
| T |
1533790 |
gctttcttcttctaccttttctttcaatttttcaacccaaccattacttccttcaatccattcgtaatttagga--aaaaattgattcat |
1533877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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