View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20578_high_77 (Length: 228)

Name: NF20578_high_77
Description: NF20578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20578_high_77
NF20578_high_77
[»] chr2 (50 HSPs)
chr2 (32-212)||(31056174-31056354)
chr2 (33-211)||(21630074-21630253)
chr2 (33-212)||(14698798-14698975)
chr2 (33-212)||(33528413-33528593)
chr2 (32-212)||(8040192-8040375)
chr2 (33-212)||(34388980-34389159)
chr2 (32-211)||(34682119-34682300)
chr2 (33-211)||(33118267-33118443)
chr2 (33-212)||(36757551-36757730)
chr2 (37-212)||(39483061-39483237)
chr2 (33-211)||(17865334-17865513)
chr2 (33-211)||(20522351-20522530)
chr2 (33-211)||(23078260-23078437)
chr2 (32-193)||(2837815-2837977)
chr2 (33-212)||(8389938-8390117)
chr2 (33-212)||(13569458-13569637)
chr2 (33-212)||(28258966-28259145)
chr2 (33-212)||(10707041-10707219)
chr2 (33-212)||(40015055-40015232)
chr2 (32-212)||(2869480-2869660)
chr2 (33-157)||(10445256-10445379)
chr2 (33-166)||(40739011-40739142)
chr2 (32-192)||(35397661-35397818)
chr2 (33-212)||(15903679-15903858)
chr2 (33-166)||(3491929-3492062)
chr2 (32-135)||(1344332-1344435)
chr2 (32-107)||(42269605-42269680)
chr2 (51-132)||(25409842-25409923)
chr2 (85-192)||(18674239-18674347)
chr2 (141-212)||(42039564-42039636)
chr2 (33-166)||(9296184-9296318)
chr2 (35-176)||(3278166-3278307)
chr2 (43-124)||(41586349-41586429)
chr2 (35-114)||(11151788-11151864)
chr2 (35-114)||(11690396-11690472)
chr2 (86-176)||(28770613-28770705)
chr2 (35-114)||(33162647-33162723)
chr2 (35-114)||(39284780-39284856)
chr2 (35-114)||(42362247-42362323)
chr2 (33-120)||(11098709-11098796)
chr2 (35-114)||(723941-724017)
chr2 (35-114)||(34139968-34140044)
chr2 (175-212)||(10445374-10445411)
chr2 (85-114)||(14202604-14202633)
chr2 (85-114)||(14634023-14634052)
chr2 (85-114)||(24885603-24885632)
chr2 (85-114)||(29867811-29867840)
chr2 (85-114)||(36773504-36773533)
chr2 (86-114)||(11067248-11067276)
chr2 (32-107)||(17490346-17490419)
[»] chr1 (45 HSPs)
chr1 (32-212)||(19073058-19073239)
chr1 (32-212)||(19120948-19121129)
chr1 (32-212)||(40816602-40816781)
chr1 (32-212)||(47703721-47703903)
chr1 (33-212)||(29651941-29652121)
chr1 (33-211)||(13598529-13598708)
chr1 (33-212)||(47098614-47098792)
chr1 (35-212)||(32889569-32889744)
chr1 (33-212)||(3281837-3282015)
chr1 (33-191)||(47102628-47102784)
chr1 (33-212)||(13604411-13604590)
chr1 (33-212)||(9476391-9476570)
chr1 (33-211)||(21536359-21536536)
chr1 (33-192)||(22819580-22819739)
chr1 (85-212)||(16124353-16124483)
chr1 (33-212)||(37069896-37070075)
chr1 (33-212)||(26644687-26644865)
chr1 (33-174)||(27104191-27104330)
chr1 (33-166)||(19361218-19361350)
chr1 (33-166)||(19358629-19358761)
chr1 (33-166)||(19366093-19366226)
chr1 (53-176)||(9022715-9022835)
chr1 (33-166)||(24202554-24202687)
chr1 (93-166)||(19379917-19379990)
chr1 (35-114)||(41360807-41360886)
chr1 (72-176)||(11031302-11031405)
chr1 (32-85)||(17345349-17345402)
chr1 (35-114)||(834364-834440)
chr1 (36-114)||(4552834-4552909)
chr1 (35-112)||(3189226-3189300)
chr1 (35-112)||(3198043-3198117)
chr1 (35-112)||(3206882-3206956)
chr1 (35-114)||(197105-197181)
chr1 (35-114)||(10925118-10925194)
chr1 (35-114)||(13138171-13138247)
chr1 (35-114)||(23555462-23555538)
chr1 (102-176)||(918336-918410)
chr1 (141-212)||(17345415-17345487)
chr1 (35-114)||(3847318-3847394)
chr1 (35-114)||(15820202-15820278)
chr1 (35-114)||(44455055-44455131)
chr1 (85-192)||(25116539-25116649)
chr1 (85-114)||(30476645-30476674)
chr1 (85-114)||(50167372-50167401)
chr1 (86-114)||(28265751-28265779)
[»] chr6 (29 HSPs)
chr6 (32-211)||(21801130-21801310)
chr6 (35-212)||(31979643-31979818)
chr6 (33-212)||(5572032-5572208)
chr6 (33-212)||(31086263-31086440)
chr6 (78-212)||(4630084-4630218)
chr6 (88-212)||(18232975-18233101)
chr6 (35-212)||(31936706-31936881)
chr6 (33-211)||(22963829-22964007)
chr6 (33-211)||(23824386-23824564)
chr6 (33-212)||(24435761-24435938)
chr6 (32-212)||(14521802-14521985)
chr6 (33-166)||(5757267-5757398)
chr6 (33-166)||(22709187-22709318)
chr6 (33-154)||(5017285-5017405)
chr6 (105-212)||(10077027-10077132)
chr6 (60-212)||(21356166-21356318)
chr6 (32-175)||(31076724-31076866)
chr6 (33-166)||(5674552-5674686)
chr6 (33-103)||(21272778-21272846)
chr6 (86-192)||(33721398-33721505)
chr6 (115-189)||(30517998-30518071)
chr6 (54-172)||(5385765-5385881)
chr6 (33-80)||(10076980-10077027)
chr6 (33-83)||(18234341-18234391)
chr6 (176-212)||(5017411-5017447)
chr6 (35-114)||(9183228-9183304)
chr6 (35-114)||(28137605-28137681)
chr6 (85-114)||(33211382-33211411)
chr6 (72-111)||(3039103-3039140)
[»] chr3 (58 HSPs)
chr3 (32-212)||(25795911-25796091)
chr3 (32-212)||(47649699-47649881)
chr3 (32-211)||(3715777-3715958)
chr3 (33-212)||(40592560-40592739)
chr3 (33-212)||(21711352-21711530)
chr3 (33-212)||(24694944-24695121)
chr3 (33-212)||(36029223-36029401)
chr3 (33-212)||(48438344-48438523)
chr3 (33-212)||(1736082-1736262)
chr3 (33-211)||(8370267-8370443)
chr3 (33-212)||(47923682-47923862)
chr3 (33-212)||(6794493-6794670)
chr3 (33-212)||(35925609-35925788)
chr3 (33-212)||(16264479-16264657)
chr3 (33-191)||(3323469-3323625)
chr3 (36-212)||(26299118-26299293)
chr3 (33-212)||(40844781-40844963)
chr3 (33-211)||(8126761-8126938)
chr3 (33-212)||(27974730-27974909)
chr3 (33-212)||(27986234-27986413)
chr3 (88-212)||(18552716-18552840)
chr3 (33-212)||(1417269-1417448)
chr3 (33-175)||(39032333-39032472)
chr3 (33-212)||(33386453-33386633)
chr3 (36-212)||(3328138-3328314)
chr3 (33-193)||(25929174-25929333)
chr3 (85-212)||(30709617-30709747)
chr3 (32-176)||(21353728-21353876)
chr3 (33-191)||(37466447-37466603)
chr3 (33-166)||(27453137-27453266)
chr3 (33-166)||(26928377-26928508)
chr3 (33-166)||(32143500-32143631)
chr3 (33-147)||(37725871-37725983)
chr3 (36-166)||(1306127-1306257)
chr3 (32-126)||(4386754-4386846)
chr3 (33-124)||(27026925-27027014)
chr3 (33-124)||(27038270-27038359)
chr3 (51-114)||(23392106-23392167)
chr3 (35-111)||(23410529-23410603)
chr3 (98-192)||(5366164-5366260)
chr3 (33-166)||(2671368-2671503)
chr3 (33-166)||(40372578-40372713)
chr3 (51-166)||(8477544-8477661)
chr3 (35-114)||(32890998-32891074)
chr3 (35-114)||(39153558-39153634)
chr3 (33-120)||(9091083-9091170)
chr3 (88-177)||(21156594-21156685)
chr3 (37-114)||(5236653-5236727)
chr3 (35-112)||(40735278-40735352)
chr3 (34-166)||(7167424-7167559)
chr3 (52-120)||(8738864-8738932)
chr3 (35-114)||(29812958-29813034)
chr3 (35-114)||(40734393-40734469)
chr3 (85-114)||(9581225-9581254)
chr3 (85-114)||(19684086-19684115)
chr3 (85-114)||(29682301-29682330)
chr3 (85-114)||(29810810-29810839)
chr3 (85-114)||(44331487-44331516)
[»] chr5 (31 HSPs)
chr5 (32-212)||(10281881-10282063)
chr5 (32-212)||(3880429-3880611)
chr5 (33-212)||(28832386-28832565)
chr5 (33-212)||(11181621-11181799)
chr5 (33-212)||(11916761-11916939)
chr5 (35-212)||(19588876-19589051)
chr5 (35-191)||(31300386-31300540)
chr5 (33-212)||(14520359-14520538)
chr5 (33-212)||(24553316-24553495)
chr5 (33-212)||(17003748-17003927)
chr5 (33-212)||(9353121-9353300)
chr5 (33-212)||(12083966-12084143)
chr5 (33-166)||(15464711-15464842)
chr5 (35-211)||(36932139-36932316)
chr5 (33-185)||(7160693-7160843)
chr5 (33-166)||(38219577-38219710)
chr5 (33-144)||(42127159-42127268)
chr5 (102-191)||(42127266-42127355)
chr5 (33-166)||(35387841-35387974)
chr5 (32-211)||(33030727-33030907)
chr5 (33-166)||(24136027-24136161)
chr5 (114-176)||(2630397-2630460)
chr5 (35-110)||(3075859-3075931)
chr5 (88-177)||(5611307-5611398)
chr5 (34-166)||(31180393-31180527)
chr5 (45-192)||(6742003-6742148)
chr5 (35-114)||(533664-533740)
chr5 (35-114)||(5887613-5887689)
chr5 (35-85)||(5007446-5007494)
chr5 (45-114)||(19806289-19806355)
chr5 (101-165)||(30900043-30900108)
[»] chr8 (41 HSPs)
chr8 (32-212)||(6127351-6127534)
chr8 (32-212)||(26403014-26403197)
chr8 (33-212)||(4696397-4696574)
chr8 (33-212)||(5702269-5702450)
chr8 (33-212)||(23799365-23799544)
chr8 (33-211)||(4456158-4456336)
chr8 (33-212)||(7412470-7412648)
chr8 (35-212)||(19752185-19752361)
chr8 (33-197)||(19175543-19175707)
chr8 (36-211)||(3051250-3051425)
chr8 (33-192)||(28307713-28307870)
chr8 (51-192)||(7492980-7493119)
chr8 (32-114)||(9765639-9765720)
chr8 (33-166)||(1261739-1261872)
chr8 (54-166)||(31071035-31071147)
chr8 (32-192)||(5990351-5990507)
chr8 (33-166)||(26288069-26288202)
chr8 (33-166)||(26301326-26301459)
chr8 (33-166)||(26313320-26313453)
chr8 (32-144)||(9054208-9054318)
chr8 (35-114)||(19491895-19491974)
chr8 (35-166)||(4759858-4759992)
chr8 (97-191)||(13204634-13204728)
chr8 (51-166)||(36979557-36979673)
chr8 (35-114)||(4731553-4731629)
chr8 (35-114)||(43036318-43036394)
chr8 (33-166)||(33037590-33037725)
chr8 (51-151)||(6311493-6311595)
chr8 (34-120)||(10688923-10689009)
chr8 (34-166)||(18870344-18870478)
chr8 (34-166)||(30655826-30655960)
chr8 (35-112)||(42498089-42498163)
chr8 (35-111)||(3303870-3303943)
chr8 (35-114)||(5689166-5689242)
chr8 (35-114)||(15212681-15212757)
chr8 (35-114)||(33352045-33352121)
chr8 (35-114)||(3318745-3318823)
chr8 (85-114)||(4743400-4743429)
chr8 (85-114)||(18106275-18106304)
chr8 (85-114)||(41365044-41365073)
chr8 (40-111)||(4162400-4162468)
[»] chr4 (47 HSPs)
chr4 (32-212)||(24333940-24334122)
chr4 (33-212)||(16623082-16623260)
chr4 (35-214)||(16628663-16628841)
chr4 (33-212)||(6743204-6743383)
chr4 (33-212)||(5268989-5269169)
chr4 (33-212)||(10047509-10047689)
chr4 (33-212)||(3777678-3777857)
chr4 (33-212)||(38152227-38152406)
chr4 (33-212)||(25861822-25862000)
chr4 (33-212)||(42599364-42599540)
chr4 (33-212)||(36315019-36315197)
chr4 (33-212)||(36329228-36329406)
chr4 (36-175)||(3793870-3794010)
chr4 (33-176)||(5112403-5112545)
chr4 (33-212)||(5396460-5396639)
chr4 (33-212)||(8689285-8689463)
chr4 (33-212)||(5143389-5143568)
chr4 (33-212)||(5147807-5147986)
chr4 (33-212)||(39774094-39774272)
chr4 (33-166)||(31985422-31985553)
chr4 (33-212)||(54867313-54867487)
chr4 (33-192)||(1983089-1983247)
chr4 (55-212)||(18377489-18377645)
chr4 (33-166)||(28468323-28468456)
chr4 (32-114)||(48893839-48893921)
chr4 (32-114)||(6542378-6542458)
chr4 (32-114)||(51336955-51337035)
chr4 (35-211)||(37781992-37782170)
chr4 (32-114)||(4587848-4587929)
chr4 (33-175)||(29760811-29760956)
chr4 (33-166)||(24742120-24742255)
chr4 (35-112)||(9927656-9927730)
chr4 (35-114)||(48142937-48143013)
chr4 (35-114)||(52082854-52082930)
chr4 (35-112)||(6677362-6677438)
chr4 (85-167)||(873356-873440)
chr4 (35-114)||(5429574-5429650)
chr4 (35-114)||(26175833-26175909)
chr4 (35-114)||(52095559-52095635)
chr4 (181-212)||(3796455-3796486)
chr4 (98-176)||(34670517-34670596)
chr4 (72-114)||(36463586-36463626)
chr4 (85-114)||(5871762-5871791)
chr4 (85-114)||(13009628-13009657)
chr4 (85-114)||(45687380-45687409)
chr4 (35-114)||(52467551-52467628)
chr4 (35-114)||(29254389-29254465)
[»] chr7 (42 HSPs)
chr7 (32-212)||(29159933-29160116)
chr7 (33-212)||(2647486-2647663)
chr7 (36-191)||(20284241-20284394)
chr7 (33-191)||(23402802-23402958)
chr7 (33-211)||(46516094-46516276)
chr7 (33-209)||(4796458-4796631)
chr7 (35-212)||(9184965-9185142)
chr7 (35-191)||(2580542-2580695)
chr7 (35-212)||(9189797-9189975)
chr7 (33-212)||(3047384-3047562)
chr7 (33-212)||(33332239-33332417)
chr7 (32-192)||(5817058-5817216)
chr7 (33-208)||(21989041-21989216)
chr7 (85-212)||(49091791-49091921)
chr7 (33-212)||(2479465-2479644)
chr7 (97-212)||(56077-56195)
chr7 (36-212)||(47263795-47263971)
chr7 (84-208)||(21983419-21983545)
chr7 (60-212)||(9235398-9235550)
chr7 (85-212)||(35960946-35961075)
chr7 (33-166)||(21639987-21640120)
chr7 (36-136)||(44847917-44848015)
chr7 (33-158)||(18413825-18413950)
chr7 (33-166)||(21646185-21646318)
chr7 (33-158)||(18408949-18409074)
chr7 (33-166)||(1533226-1533360)
chr7 (33-114)||(49091918-49091997)
chr7 (35-114)||(43864139-43864215)
chr7 (35-114)||(38671419-38671495)
chr7 (33-120)||(2058196-2058283)
chr7 (129-212)||(44848567-44848652)
chr7 (34-166)||(20357330-20357464)
chr7 (35-110)||(6570489-6570561)
chr7 (35-114)||(24526094-24526170)
chr7 (35-114)||(47676333-47676409)
chr7 (35-114)||(48489326-48489402)
chr7 (35-121)||(19502073-19502156)
chr7 (33-75)||(79654-79696)
chr7 (85-115)||(41649206-41649236)
chr7 (85-114)||(4586103-4586132)
chr7 (85-114)||(31733166-31733195)
chr7 (35-67)||(40808485-40808517)
[»] scaffold0006 (3 HSPs)
scaffold0006 (33-211)||(5814-5993)
scaffold0006 (41-213)||(2621-2794)
scaffold0006 (33-212)||(133068-133247)
[»] scaffold0148 (1 HSPs)
scaffold0148 (32-212)||(10859-11042)
[»] scaffold0036 (1 HSPs)
scaffold0036 (33-212)||(85812-85991)
[»] scaffold0087 (2 HSPs)
scaffold0087 (33-209)||(36621-36797)
scaffold0087 (33-166)||(43750-43881)
[»] scaffold0140 (1 HSPs)
scaffold0140 (33-166)||(8206-8337)
[»] scaffold0098 (1 HSPs)
scaffold0098 (33-166)||(45375-45507)
[»] scaffold0176 (1 HSPs)
scaffold0176 (33-212)||(17393-17559)
[»] scaffold0188 (2 HSPs)
scaffold0188 (33-166)||(17737-17870)
scaffold0188 (33-166)||(23830-23963)
[»] scaffold0078 (1 HSPs)
scaffold0078 (33-212)||(23661-23840)
[»] scaffold0477 (1 HSPs)
scaffold0477 (32-82)||(5744-5794)
[»] scaffold0002 (1 HSPs)
scaffold0002 (85-192)||(14833-14941)


Alignment Details
Target: chr2 (Bit Score: 162; Significance: 1e-86; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 31056354 - 31056174
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31056354 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 31056255  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    | ||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31056254 gaaaggatcaaaaagcttccttttgtgttttctcttaggattca-ttgagagtgtgggtgacacaaaatgggtagaaattag 31056174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 21630253 - 21630074
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| || |||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  21630253 tacaaaggaggtaactttagtgttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 21630156  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    |||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  21630155 gaaggatcaaaaagcttccttttgtgttttctcttaggattcattattgagagtgtgggtgacacaaaatgggtagaaatta 21630074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 14698798 - 14698975
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||| |  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  14698798 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctctcg--ggttgggaaacattgtaaacaccttgggtagtgagatttcactattg 14698895  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14698896 gaaggatcaaaaagcttccttttgtgttttctcttaggattca-ttgagagtgtgggtgacacaaaatgggtagaaattag 14698975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 33528413 - 33528593
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  33528413 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacacattgggtagtgagatttcaccattg 33528510  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| |||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||    
T  33528511 gaaggatcaaaaagcttccttttgtgttttctcttaggattcattattgagagtttgggtgacacaaaatgggtagaaattag 33528593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 8040375 - 8040192
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    |||||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8040375 atacaaaggaggtaactttatggttgagtgtctttgtagtgaagttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 8040276  T
Q  132 ggaaggatc-aaaagcttccttttgtg-ttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||| |||||||||||||| || |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  8040275 ggaaggatcaaaaagcttccttttatgtttttctcttaggattcatattgtgagagtgggtgacacaaaatgggtagaaattag 8040192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 34389159 - 34388980
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||| ||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  34389159 tacaaaggaggtaactttagggttgtgtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 34389062  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  34389061 gaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgtgagagtgggtgacacaaaatgggtagaaattag 34388980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 32 - 211
Target Start/End: Original strand, 34682119 - 34682300
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |    
T  34682119 atacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagagttggaaaacattgtaaacaccttgggtagtgagatttcaccact 34682218  T
Q  132 ggaaggatcaaaa-gcttccttttgtgttttctcttaggattca-tttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
     |||||||||||| | ||||||||||||||||||||||||||||  ||| ||| ||||||||||||||||||||||||||||    
T  34682219 tgaaggatcaaaatgtttccttttgtgttttctcttaggattcaccttgtgagagtgggtgacacaaaatgggtagaaatta 34682300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 33118443 - 33118267
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  33118443 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttggggaacattgtaaacaccttgggtagtgagatttcgccattg 33118346  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    |||||||| ||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||    
T  33118345 gaaggatcaaaaagcttccttttgtgttttctcttaagattca-ttgagagtgagggtgacacaaaatgggtagaaatta 33118267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 36757551 - 36757730
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  36757551 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 36757648  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc-ttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||  ||||||| |||||| |||| |||||||||||||||||    
T  36757649 gaaggatcaaaagcttccttttgtgtcttctctttagggttcatcattgagagagtgggtaacac-aaatgggtagaaattag 36757730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 37 - 212
Target Start/End: Complemental strand, 39483237 - 39483061
Alignment:
Q  37 aaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaag 136  Q
    |||||| |||||| |||||||||||||||||| |||||| |||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||     
T  39483237 aaggagataactttagggttgagtgtctttgttgtgaggatctcttg--ggttgggaaatattgtaaacaccttgggtagtgagatttcaccattggaat 39483140  T
Q  137 gatc-aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||| |||| ||||||||||||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||    
T  39483139 gatcaaaaaacttccttttgtgttttctcttaggattcattattgagagtgtgggtgacataaaatgggtagaaattag 39483061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 17865513 - 17865334
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||| | |     
T  17865513 tacaaaggaggtaactttagggttgagtgtctttgtagtgaagatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcacaaata 17865416  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    |||||||| |||||||||||||||||||||||||||||||||||  |||||||||||| ||||| ||||| |||||||||||    
T  17865415 gaaggatcaaaaagcttccttttgtgttttctcttaggattcattattgagagtgtggatgacataaaataggtagaaatta 17865334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 20522530 - 20522351
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||  |||||||  ||||||||| ||||||||||| ||||||||||||||||||||||||     
T  20522530 tacaaaggaggtaactttagggttgagtgtctttgtagtgagtatctcttg--ggttgggaagcattgtaaacaacttgggtagtgagatttcaccattt 20522433  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    ||| |||| ||||||||||||||||||||| |||||||| ||||  ||||||||||||||||||||||||||||||||||||    
T  20522432 gaatgatcaaaaagcttccttttgtgttttttcttaggactcattattgagagtgtgggtgacacaaaatgggtagaaatta 20522351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 23078260 - 23078437
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||||||||||||||  |||||||||||||||||  ||||  |||||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  23078260 tacaaaggaggtaacttttgggttgagtgtctttgtgatgagaatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcatcattg 23078357  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    |||||||||||||||||||||||||| |||||||||| |||||  |||||||||||||| |||| ||||||||||||||||    
T  23078358 gaaggatcaaaagcttccttttgtgtcttctcttagggttcatcattgagagtgtgggtaacac-aaatgggtagaaatta 23078437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 32 - 193
Target Start/End: Original strand, 2837815 - 2837977
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgag-atttcaccat 130  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  2837815 atacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggatagtgagaatttcaccat 2837914  T
Q  131 tggaaggat-caaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca 193  Q
    |||||||||  ||||  ||||||| |||||||||||||||||||| ||||||  ||||||||||    
T  2837915 tggaaggataaaaaatattcctttagtgttttctcttaggattca-ttgagaaggtgggtgaca 2837977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 8389938 - 8390117
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||||||| |||||| ||||||||| ||||||||||||| | |||||||  |||| |||||||||||||||||||||| ||||||||||| |||||||    
T  8389938 tacaaaggagataactttagggttgagggtctttgtagtgatgatctcttg--ggttaggaaacattgtaaacaccttggatagtgagattttaccattg 8390035  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||| ||| ||||||||||| ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  8390036 gaagaatcaaaaagcttcctcttgtgttttctcttaggattcatattgtgagagtgggtgacacaaaatgggtagaaattag 8390117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 13569637 - 13569458
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||| ||| |||||| |||||| |||||||||||||||||| |||||||  |||||||||||||| |||||||||||| |||||||||||||||||||    
T  13569637 tacaaatgagataactttagggttaagtgtctttgtagtgaggatctcttg--ggttgggaaacattataaacaccttggatagtgagatttcaccattg 13569540  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||| ||| |||||||||| | || |||||||||||||    
T  13569539 gaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgtgagagtgggtgacaaacaaagggtagaaattag 13569458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 28258966 - 28259145
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||||||||||||| |||||||| |||||||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  28258966 tacaaaggaggtaactttagggttgagtgtctttatagtgaggatctcttg--ggttgggaaacattgtaaacatcttgggtagtgagatttcaccattg 28259063  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc-ttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||| ||||| |||||  ||||  ||||||| |||||  |||| |||||||||||||||||    
T  28259064 gaaggatcaaaagcttccttttgtgtcttctctttaggggtcattattgagagagtgggaaacac-aaatgggtagaaattag 28259145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 10707041 - 10707219
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||| | | |||||||||||||| |||||||  ||||| |||||||||||||||||||||||||| |||||||||||||     
T  10707041 tacaaaggaggtaactttagggtttattatctttgtagtgaggatctcttg--ggttgagaaacattgtaaacaccttgggtagttagatttcaccatta 10707138  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| | |||||||||||||||    
T  10707139 gaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgtgagagtgggtgacac-agatgggtagaaattag 10707219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 40015232 - 40015055
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||||||||| |||||| |||||||||||||  |||||||||||||||||||||| |||| |||||||||||||||||||    
T  40015232 tacaaaggaggtaactttagggttgagtgt-tttgtattgaggttctcttg--ggttgggaaacattgtaaacacattggatagtgagatttcaccattg 40015136  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca-caaaatgggtagaaattag 212  Q
    |||||||| ||||||||||||||||| ||| |||||||||| | ||||||||||||||||||  |||||| |||||||||||    
T  40015135 gaaggatcaaaaagcttccttttgtgatttttcttaggattta-ttgagagtgtgggtgacatgaaaatgagtagaaattag 40015055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 2869480 - 2869660
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||||||| |||||| | ||||||||||||||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||||||||| |||||    
T  2869480 atacaaaggagataactttacggttgagtgtctttgtagtgaggttctcttga--gttggaaaacattgtaaacacattgggtagtgagatttcgccatt 2869577  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgac--acaaaatgggtagaaattag 212  Q
    ||||| ||| |||||||||| || |||||||||||||||||||| |||||||||||||||||    ||||||||||||||||||    
T  2869578 ggaagaatcaaaaagcttccgttagtgttttctcttaggattca-ttgagagtgtgggtgacttgaaaaatgggtagaaattag 2869660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 157
Target Start/End: Original strand, 10445256 - 10445379
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||||| |||||||||||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  10445256 tacaaaggaggtaactttagggttgaatgtctttgtagtgaggttctctcg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 10445353  T
Q  133 gaaggatc-aaaagcttccttttgtg 157  Q
    |||||||| |||||||||||||||||    
T  10445354 gaaggatcaaaaagcttccttttgtg 10445379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 40739142 - 40739011
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||| ||||  ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  40739142 tacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtaatgagatttcaccattg 40739045  T
Q  133 gaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||||||||| || |||||| |||||||    
T  40739044 gaaggatcaaaagcttactattgtgtcttctctt 40739011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 32 - 192
Target Start/End: Complemental strand, 35397818 - 35397661
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||||||||| |||| |||||||| ||||||||||||||||||||  ||  |||||| |||||||||||  ||||||||||||||||||||||||||    
T  35397818 atacaaaggaggtcactttagggttgattgtctttgtagtgaggttcttctg--ggttggaaaacattgtaattaccttgggtagtgagatttcaccatt 35397721  T
Q  132 ggaaggatcaaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgac 192  Q
    ||||||||||| | ||||   |||| ||||||||||||||||| |||||| ||||||||||    
T  35397720 ggaaggatcaataacttcaaattgtattttctcttaggattca-ttgagattgtgggtgac 35397661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 15903679 - 15903858
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||| |||||||| |  ||||||| ||||||||||||||||||||||||  |||| ||||||||||||||||| |||| || ||||||||||||||||    
T  15903679 tacaaatgaggtaacctttgggttgaatgtctttgtagtgaggttctcttg--ggttaggaaacattgtaaacacattggataatgagatttcaccattg 15903776  T
Q  133 gaaggat-caaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgac--acaaaatgggtagaaattag 212  Q
    ||| |||  ||||| || ||||||||||||||| ||||||||| |||||||||||||||||    ||||||||||||||||||    
T  15903777 gaatgataaaaaagatttcttttgtgttttctcataggattca-ttgagagtgtgggtgacttgaaaaatgggtagaaattag 15903858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 3492062 - 3491929
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccat 130  Q
    ||||||||||| || |  ||||||||||||||||||||||||| |||||||  |||||| |||  |||||||||||||||||||||||||||| ||||||    
T  3492062 tacaaaggagggaaatctagggttgagtgtctttgtagtgaggatctcttg--ggttggaaaaaacattgtaaacaccttgggtagtgagattccaccat 3491965  T
Q  131 tggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||||  ||||||||| |||||| |||||||    
T  3491964 tggaaggatcttaagcttcctcttgtgtcttctctt 3491929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 1344332 - 1344435
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgag-atttcaccat 130  Q
    ||||||| ||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  1344332 atacaaatgaggtaattttagggttgagtgtctttgtagtgaggttctcttga-ggttgggaaacattgtaaacatcttcggtagtgagaatttcaccat 1344430  T
Q  131 tggaa 135  Q
    |||||    
T  1344431 tggaa 1344435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 42269680 - 42269605
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacac 107  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42269680 atacaaaggaggtaactttaaggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacac 42269605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 132
Target Start/End: Complemental strand, 25409923 - 25409842
Alignment:
Q  51 agggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||||||||||||||||| |||| |||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||    
T  25409923 agggttgagtgtctttgtagagaggatctcttg--ggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattg 25409842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 18674239 - 18674347
Alignment:
Q  85 gggttgggaaacatt-gtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgttttctcttaggattcatttgagag 182  Q
    ||||||||||||||| |||||||||||| | ||||||||||||  |||| ||||||||||| |||||||||  |||||||||||| |||||||||  |||    
T  18674239 gggttgggaaacattcgtaaacaccttgagcagtgagatttcattattg-aaggatcaaaaagcttcctttaatgttttctcttatgattcatttatgag 18674337  T
Q  183 tgtgggtgac 192  Q
    ||||||||||    
T  18674338 tgtgggtgac 18674347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 42039564 - 42039636
Alignment:
Q  141 aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||| ||||||||| |||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  42039564 aaaaacttccttttatgttttctcttaggattcatattgtgagagtgggtgacacaaaatgggtagaaattag 42039636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 9296184 - 9296318
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca 129  Q
    ||||||||||| |||   ||||||||||||||||||||  ||  ||| |||  ||||||||||  |||||||| |||||||||||||||| | |||||||    
T  9296184 tacaaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctattg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcacca 9296281  T
Q  130 ttggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||||| |||||||||| | |||| |||||||    
T  9296282 ttggaaggatctaaagcttcctctagtgtcttctctt 9296318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 176
Target Start/End: Complemental strand, 3278307 - 3278166
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacatt-gtaaacaccttgggtagtgagatttcaccattgg 133  Q
    |||| |||||||||| |||||||||| || |||  | ||| ||||||||  |||||| ||||||| ||||||||||||| |||||||||||||  || ||    
T  3278307 caaatgaggtaactttagggttgagtatcgttgatgagagattctcttg--ggttggaaaacatttgtaaacaccttggatagtgagatttcattatagg 3278210  T
Q  134 aaggatc-aaaagcttccttttgtgttttctcttaggattcatt 176  Q
    | ||||| |||| |||||||| | ||||||||||||| ||||||    
T  3278209 acggatcaaaaaacttcctttagcgttttctcttagggttcatt 3278166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 43 - 124
Target Start/End: Original strand, 41586349 - 41586429
Alignment:
Q  43 gtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaaca-ttgtaaacaccttgggtagtgagattt 124  Q
    ||||||| |||||||||||||||||  | ||| ||||||||  |||||| ||||| |||||||||||||||||||||||||||    
T  41586349 gtaactttagggttgagtgtctttggtgagagcttctcttg--ggttggaaaacagttgtaaacaccttgggtagtgagattt 41586429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 11151864 - 11151788
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  11151864 caaaggaggtaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 11151788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 11690396 - 11690472
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| ||||||| | |   |||||||||  |||||||||||||||||||||||||||||    
T  11690396 caaaggaggtaactttagggttgagggtctttg-attatagttctcttg--ggttgggaaacattgtaaacaccttgggt 11690472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 28770613 - 28770705
Alignment:
Q  86 ggttgggaaacatt-gtaaacaccttgggtagtgagatttcaccattggaaggat-caaaagcttccttttgtgttttctcttaggattcatt 176  Q
    |||||| ||||||| ||||||||||||||||||||||| |||  |   |||||||  ||||| ||||||| ||||||||||||||||||||||    
T  28770613 ggttggaaaacatttgtaaacaccttgggtagtgagatctcattagctgaaggataaaaaagtttcctttagtgttttctcttaggattcatt 28770705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 33162723 - 33162647
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    |||||||||||| || ||||||||| ||||||| | |  ||||||||||||  |||||||||||||||||||||||||||    
T  33162723 caaaggaggtaattttagggttgagggtctttg-attagggttctcttgag--ttgggaaacattgtaaacaccttgggt 33162647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 39284780 - 39284856
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  39284780 caaaggaggtaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 39284856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 42362247 - 42362323
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  42362247 caaaggaggtaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 42362323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 11098709 - 11098796
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 120  Q
    ||||||||||| |||   |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  11098709 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 11098796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 724017 - 723941
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| |||||||    ||| |||| |||  |||||||||||||||||||||||||||||    
T  724017 caaaggaggtaactttagggttgagggtctttgattagag-ttcttttg--ggttgggaaacattgtaaacaccttgggt 723941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 34140044 - 34139968
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||  |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  34140044 caaaggaggtaactttagggttgaaagtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 34139968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 175 - 212
Target Start/End: Original strand, 10445374 - 10445411
Alignment:
Q  175 tttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||| ||| |||||||||||||||||||||||||||||    
T  10445374 tttgtgagagtgggtgacacaaaatgggtagaaattag 10445411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 14202633 - 14202604
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  14202633 gggttgggaaacattgtaaacaccttgggt 14202604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 14634052 - 14634023
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  14634052 gggttgggaaacattgtaaacaccttgggt 14634023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 24885603 - 24885632
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  24885603 gggttgggaaacattgtaaacaccttgggt 24885632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 29867811 - 29867840
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  29867811 gggttgggaaacattgtaaacaccttgggt 29867840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 36773504 - 36773533
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  36773504 gggttgggaaacattgtaaacaccttgggt 36773533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 114
Target Start/End: Original strand, 11067248 - 11067276
Alignment:
Q  86 ggttgggaaacattgtaaacaccttgggt 114  Q
    |||||||||||||||||||||||||||||    
T  11067248 ggttgggaaacattgtaaacaccttgggt 11067276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 107
Target Start/End: Complemental strand, 17490419 - 17490346
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacac 107  Q
    |||||||||| ||||||| | |||||| ||| ||| |||| ||||||||||||  ||||| |||||||| ||||||    
T  17490419 atacaaaggaagtaactttaaggttgattgtatttatagtaaggttctcttga--gttggaaaacattgcaaacac 17490346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 162; Significance: 1e-86; HSPs: 45)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 19073239 - 19073058
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19073239 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggatagtgagatttcaccatt 19073140  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  19073139 ggaaggatcaaaaagcttccttttgtgttttctcttagggttcatttgagagtgtgagtgacacaaaatgggtagaaattag 19073058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 19121129 - 19120948
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  19121129 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttggatagtgagatttcaccatt 19121030  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  19121029 ggaaggatcaaaaagcttccttttgtgttttctcttagggttcatttgagagtgtgagtgacacaaaatgggtagaaattag 19120948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 40816602 - 40816781
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40816602 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 40816701  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||    
T  40816702 ggaaggatcaaaaagcttccttttgtgttttctcttaggattca-ttgagagtgtgggtgacac-aaatgagtagaaattag 40816781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 47703721 - 47703903
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47703721 atacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 47703820  T
Q  132 ggaaggat-caaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||| |||  |||| |||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  47703821 ggaatgataaaaaaacttccttttgtgttttctcttaggattcatattgtgagagtgggtgacacaaaatgggtagaaattag 47703903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 29652121 - 29651941
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  29652121 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatcttttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 29652024  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| ||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  29652023 gaaggatcaaaaagtttccttttgtgttttctcttaggattcattattgagagtgtgggtgacacaaaatgggtagaaattag 29651941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 13598708 - 13598529
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| | ||||||||||||||||||||||| |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  13598708 tacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttg--ggttggcaaacattgtaaacaccttgggtagtgagatttcaccattg 13598611  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    |||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  13598610 gaaggatcaaaaagcttccttttgtgttttctcttaggattcatcattgagagtgtgggtgacacaaaatgagtagaaatta 13598529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 47098614 - 47098792
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  47098614 tacaaaggaggtaactttagggttgagtgtctttgtagcgaggttctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 47098711  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtga-cacaaaatgggtagaaattag 212  Q
    |||||||| ||||||||||||||||||||| ||||||| |||| ||||||||||||||||    ||||||||||||||||||    
T  47098712 gaaggatcaaaaagcttccttttgtgttttttcttaggtttca-ttgagagtgtgggtgatgtgaaaatgggtagaaattag 47098792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 32889744 - 32889569
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 134  Q
    ||||||||||||||| ||||||||||||||||||||||||||| | |||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  32889744 caaaggaggtaactttagggttgagtgtctttgtagtgaggtttttttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 32889647  T
Q  135 aggatcaaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca--caaaatgggtagaaattag 212  Q
    ||| |||||||||| ||||||||||||||||||||||||| |||||||||||||||| |   ||||||||||||||||||    
T  32889646 aggttcaaaagctt-cttttgtgttttctcttaggattca-ttgagagtgtgggtgatatgaaaaatgggtagaaattag 32889569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 3282015 - 3281837
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||| |||||||||| | ||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  3282015 tacaaatgaggtaactttatggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 3281918  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||| |||||||||| |||||  ||||||| |||||  |||| |||||||||||||||||    
T  3281917 gaaggatcaaaagcttccttttgtgtcttctcttagggttcatcattgagagagtgggaaacac-aaatgggtagaaattag 3281837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 33 - 191
Target Start/End: Original strand, 47102628 - 47102784
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  47102628 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcatcattg 47102725  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtga 191  Q
    |||||||| |||||||| |||||||||||| |||||||||||| ||||||||||| ||||    
T  47102726 gaaggatcaaaaagctttcttttgtgttttttcttaggattca-ttgagagtgtgagtga 47102784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 13604411 - 13604590
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||| ||||| |||||||||| |||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  13604411 tacaaaggagggaactttagggttgagtatctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 13604508  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc-ttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||  ||||||| |||||  |||| |||||||||||||||||    
T  13604509 gaaggatcaaaagcttccttttgtgtcttctctttagggttcattattgagagagtgggaaacac-aaatgggtagaaattag 13604590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 9476570 - 9476391
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||||||||||||||  ||||||| |||||||||||||||||||||||   ||||||||||||||||||||| ||||||||||||||||||||||||     
T  9476570 tacaaaggaggtaacttttgggttgaatgtctttgtagtgaggttctcttt--ggttgggaaacattgtaaacatcttgggtagtgagatttcaccattt 9476473  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattca-tttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| ||||||||||||||||||||||||||| ||||||  ||| ||| ||| |||||||||||||| ||||||||||    
T  9476472 gaaggatcaaaaagcttccttttgtgttttctcttaagattcacattgtgagagtgagtgacacaaaatggatagaaattag 9476391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 21536359 - 21536536
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||   |||||| ||||||||||||||||||||||||| ||||||||||||||    
T  21536359 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctctta--ggttggaaaacattgtaaacaccttgggtagtaagatttcaccattg 21536456  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    |||||||| ||||||||||||||||| |||||||||| |||||  ||||||| |||||| |||| ||| ||||||||||||    
T  21536457 gaaggatcgaaagcttccttttgtgtcttctcttagggttcatcattgagagagtgggtaacac-aaacgggtagaaatta 21536536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 33 - 192
Target Start/End: Complemental strand, 22819739 - 22819580
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||| || ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||||||||||||    
T  22819739 tacaaaggaggtaactttaggatttagtgtctttgtagtgaggttctcttg--ggttgggaaacattgtaaacaccttgggtagttacatttcaccattg 22819642  T
Q  133 gaaggatc-aaaagcttccttttgtg--ttttctcttaggattcatttgagagtgtgggtgac 192  Q
    |||||||| |||||||||||||||||  ||||||||||||||||| |||||||||||||||||    
T  22819641 gaaggatcaaaaagcttccttttgtgttttttctcttaggattca-ttgagagtgtgggtgac 22819580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 85 - 212
Target Start/End: Original strand, 16124353 - 16124483
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgaga 181  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||| |    
T  16124353 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattattgaaa 16124452  T
Q  182 gtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| ||||||||||||||||||||||    
T  16124453 gtgtgggtaacacaaaatgggtagaaattag 16124483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 37070075 - 37069896
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| | ||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||| || ||||||||||||||||    
T  37070075 tacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggataatgagatttcaccattg 37069978  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc-ttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||| ||||| ||| | |||||  ||||| | |||||| |||| |||||||||||||||||    
T  37069977 gaaggatcaaaagcttccttttgtgtcttctctttatggttcattattgagtgagtgggtaacac-aaatgggtagaaattag 37069896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 26644687 - 26644865
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||||||| ||| || ||||||||||||||||||||||| | ||| |||  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  26644687 tacaaaggagataattttagggttgagtgtctttgtagtgaagatcttttg--ggttgggaaacattgtaaacaccttgagtagtgagatttcaccattg 26644784  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||| |||||||||| |||||  ||||||| ||| |  |||| |||||||||||||||||    
T  26644785 gaaggatcaaaagcttccttttgtgtcttctcttagggttcatcattgagagagtgagaaacac-aaatgggtagaaattag 26644865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 33 - 174
Target Start/End: Original strand, 27104191 - 27104330
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| | |||||||||||||||||||||||| ||||||  |||||||||||||| ||| ||||||||||||||||||||||||||||    
T  27104191 tacaaaggaggtaactttaaggttgagtgtctttgtagtgaggt-ctcttg--ggttgggaaacattataagcaccttgggtagtgagatttcaccattg 27104287  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattca 174  Q
    |||| ||| ||||||||||||||||||||||||||| ||||||    
T  27104288 gaagaatcaaaaagcttccttttgtgttttctcttaagattca 27104330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 19361218 - 19361350
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa-cattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||||||| ||||  ||||||||||||||||||||||||| |||||||  |||||||||| ||||||||||||||||||||||||||||||||||||    
T  19361218 tacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaaacattgtaaacaccttgggtagtgagatttcaccatt 19361315  T
Q  132 ggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||| |||||||||| |||||| |||||||    
T  19361316 ggaaggatctaaagcttcctcttgtgtcttctctt 19361350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 19358629 - 19358761
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa-cattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||||||| ||||  ||||||||||||||||||||||||| ||| |||  |||||||||| ||||||||||||||||||||||||||||||||||||    
T  19358629 tacaaaggagggaactctagggttgagtgtctttgtagtgaggatcttttg--ggttgggaaaacattgtaaacaccttgggtagtgagatttcaccatt 19358726  T
Q  132 ggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||| |||||||||| |||||| |||||||    
T  19358727 ggaaggatctaaagcttcctcttgtgtcttctctt 19358761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 19366093 - 19366226
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacat--tgtaaacaccttgggtagtgagatttcaccat 130  Q
    ||||||||||| ||||  ||||||||||||||||||||||||| |||||||  |||||||||| ||  ||||||||||||||||||||||||||||||||    
T  19366093 tacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaaaatattgtaaacaccttgggtagtgagatttcaccat 19366190  T
Q  131 tggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||| |||||||||| |||||| |||||||    
T  19366191 tggaaggatctaaagcttcctcttgtgtcttctctt 19366226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 53 - 176
Target Start/End: Original strand, 9022715 - 9022835
Alignment:
Q  53 ggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggat-caaaagcttcct 151  Q
    |||||| ||||||||||||||||||||||||  ||||| |||||||||||||||||||  |||||||||||||||||||||||||||  ||||||||||     
T  9022715 ggttgaatgtctttgtagtgaggttctcttg--ggttgagaaacattgtaaacacctttcgtagtgagatttcaccattggaaggataaaaaagcttcc- 9022811  T
Q  152 tttgtgttttctcttaggattcatt 176  Q
     ||| ||||||||||||||||||||    
T  9022812 -ttgagttttctcttaggattcatt 9022835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 24202554 - 24202687
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccat 130  Q
    ||||||||||| ||||| |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| |||||||||||||||||| |||||||    
T  24202554 tacaaaggagggaactttagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgagatctcaccat 24202651  T
Q  131 tggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||| |||||||||| | |||| |||||||    
T  24202652 tggaaggatctaaagcttcctctagtgtcttctctt 24202687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 19379917 - 19379990
Alignment:
Q  93 aaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||    
T  19379917 aaacattgtaaacaccttgggtagtgagatttcaccattggaaggatctaaagcttcctcttgtgtcttctctt 19379990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 41360807 - 41360886
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| |||||||||||  | ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  41360807 caaaggaggtaactttagggttgagtgcatgtgtagtgaggttctcttgagggttgggaaacatcgtaaacatcttgggt 41360886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 72 - 176
Target Start/End: Original strand, 11031302 - 11031405
Alignment:
Q  72 gaggttctcttgagggttgggaaacatt-gtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtg-ttttctcttag 168  Q
    ||||||||||||  |||||||||||||| ||||||||| |||||||||||  ||||  |||||||||||| ||||||||||||| ||| |||||||||||    
T  11031302 gaggttctcttg--ggttgggaaacatttgtaaacaccgtgggtagtgag--ttcattattggaaggatcaaaaagcttcctttagtgtttttctcttag 11031397  T
Q  169 gattcatt 176  Q
    ||| ||||    
T  11031398 gatacatt 11031405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 32 - 85
Target Start/End: Original strand, 17345349 - 17345402
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgag 85  Q
    ||||||||||||||  || |||||||||||||||||||||||||||||||||||    
T  17345349 atacaaaggaggtacatttagggttgagtgtctttgtagtgaggttctcttgag 17345402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 834440 - 834364
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| ||||||| | | | |||||||||  |||||||||||||||||||||||||||||    
T  834440 caaaggaggtaactttagggttgagggtctttg-attaaagttctcttg--ggttgggaaacattgtaaacaccttgggt 834364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 114
Target Start/End: Complemental strand, 4552909 - 4552834
Alignment:
Q  36 aaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    |||||||||||||| ||||||||| ||||||  | |||||||||||||  ||||| |||||||||||||||||||||||    
T  4552909 aaaggaggtaactttagggttgagggtcttta-attgaggttctcttg--ggttgagaaacattgtaaacaccttgggt 4552834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 3189226 - 3189300
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 112  Q
    ||||||||||||||| ||||||||| ||||||| | | | |||||||||  |||||||||||||||||||||||||||    
T  3189226 caaaggaggtaactttagggttgagggtctttg-attaaagttctcttg--ggttgggaaacattgtaaacaccttgg 3189300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 3198043 - 3198117
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 112  Q
    ||||||||||||||| ||||||||| ||||||| | | | |||||||||  |||||||||||||||||||||||||||    
T  3198043 caaaggaggtaactttagggttgagggtctttg-attaaagttctcttg--ggttgggaaacattgtaaacaccttgg 3198117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 3206882 - 3206956
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 112  Q
    ||||||||||||||| ||||||||| ||||||| | | | |||||||||  |||||||||||||||||||||||||||    
T  3206882 caaaggaggtaactttagggttgagggtctttg-attaaagttctcttg--ggttgggaaacattgtaaacaccttgg 3206956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 197181 - 197105
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  197181 caaaggaggtaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 197105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 10925118 - 10925194
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| ||||||| | |   |||||||||  |||||||||||||||||||||||||||||    
T  10925118 caaaggaggtaactttagggttgagggtctttg-attatagttctcttg--ggttgggaaacattgtaaacaccttgggt 10925194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 13138247 - 13138171
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| ||||||| | |  |||||||||| ||  ||||||||||||||||||||||||||    
T  13138247 caaaggaggtaactttagggttgagggtctttg-attagggttctcttgggg--tgggaaacattgtaaacaccttgggt 13138171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 23555538 - 23555462
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| |||||||||  |||||| | | | |||||||||  |||||||||||||||||||||||||||||    
T  23555538 caaaggaggtaacttcagggttgaggatctttg-attaaagttctcttg--ggttgggaaacattgtaaacaccttgggt 23555462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 918336 - 918410
Alignment:
Q  102 aaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttctcttaggattcatt 176  Q
    ||||| ||||||||||||||| |||  |  ||||| ||||||||||||| ||  |||||||||||||||||||||    
T  918336 aaacatcttgggtagtgagatctcattagaggaagcatcaaaagcttccattattgttttctcttaggattcatt 918410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 141 - 212
Target Start/End: Original strand, 17345415 - 17345487
Alignment:
Q  141 aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgac--acaaaatgggtagaaattag 212  Q
    ||||| || |||||||||||||||||| |||||| || ||||||||||||||  | ||||||||||||||||||    
T  17345415 aaaagttttcttttgtgttttctcttaagattca-ttaagagtgtgggtgacttaaaaaatgggtagaaattag 17345487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 3847394 - 3847318
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||| ||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  3847394 caaaggaggtaactttagggtcgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 3847318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 15820202 - 15820278
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    |||| |||||||||| ||||||||| |||||||    ||| ||||||||||  |||||||||||||||||||||||||||    
T  15820202 caaaagaggtaactttagggttgagggtctttgattagag-ttctcttgag--ttgggaaacattgtaaacaccttgggt 15820278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 44455055 - 44455131
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| |||||||    ||| || |||||  |||||||||||||||||||||||||||||    
T  44455055 caaaggaggtaactttagggttgagggtctttgattagagttt-tcttg--ggttgggaaacattgtaaacaccttgggt 44455131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 192
Target Start/End: Original strand, 25116539 - 25116649
Alignment:
Q  85 gggttgggaaacatt-gtaaacacctt-gggtagtgagatttcaccattggaaggatcaaaagc-ttccttttgtgttttctcttaggattcatttgaga 181  Q
    ||||||||||||||| |||||||| || ||||||||||||||||  ||| ||||||| ||||   || |||| ||||||||||||| |||| ||||  ||    
T  25116539 gggttgggaaacatttgtaaacacattagggtagtgagatttcattatttgaaggattaaaaaaatttctttagtgttttctcttaagatttatttatga 25116638  T
Q  182 gtgtgggtgac 192  Q
    |||||| ||||    
T  25116639 gtgtggatgac 25116649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 30476674 - 30476645
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  30476674 gggttgggaaacattgtaaacaccttgggt 30476645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 50167401 - 50167372
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  50167401 gggttgggaaacattgtaaacaccttgggt 50167372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 114
Target Start/End: Complemental strand, 28265779 - 28265751
Alignment:
Q  86 ggttgggaaacattgtaaacaccttgggt 114  Q
    |||||||||||||||||||||||||||||    
T  28265779 ggttgggaaacattgtaaacaccttgggt 28265751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 161; Significance: 5e-86; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 32 - 211
Target Start/End: Original strand, 21801130 - 21801310
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  21801130 atacaaagcaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaacatt 21801229  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21801230 ggaaggatcaaaaagcttccttttgtgttttctcttagggttcatttgagagtgtgggtgacacaaaatgggtagaaatta 21801310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 31979818 - 31979643
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 134  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||  ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31979818 caaaggaggtaactttagggttgagtgtctttgtagtgaggttcttttg--ggttgagaaacattgtaaacaccttgggtagtgagatttcaccattgga 31979721  T
Q  135 aggatcaaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacac-aaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  31979720 aggatcaaaagcttccttttgtgttttctcttaggattca-ttgagagtgtgggtgacacaaaaatgggtagaaattag 31979643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 5572032 - 5572208
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||| ||||||||||| ||||||| |||||||||||||| || |||||||  |||||||||||||||||||||||||||||||||||||||||| ||||    
T  5572032 tacaatggaggtaactttagggttgggtgtctttgtagtggggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcactattg 5572129  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  5572130 gaatgatcaaaagcttccttttgtgttttctcttaggattca-ttgagagtgtgggtgacacaaaatgcgtagaaattag 5572208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 31086263 - 31086440
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||||| |||||||| ||||||||||||||||||||||||| ||||||   ||||| ||||||||||||||||||||||| |||||||||||||||||    
T  31086263 tacaaagggggtaactttagggttgagtgtctttgtagtgaggatctctta--ggttgagaaacattgtaaacaccttgggttgtgagatttcaccattg 31086360  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||||||||||| |||| |||||||||||||||||||||   |||||||||||||||||||||||||||||||||    
T  31086361 gaaggatcaaaagcttctttttatgttttctcttaggattcattattgagtgtgggtgacacaaaatgggtagaaattag 31086440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 78 - 212
Target Start/End: Complemental strand, 4630218 - 4630084
Alignment:
Q  78 ctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttctcttaggattcattt 177  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4630218 ctcttgagggttgggaaacattttaaacacattgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttctcttaggattcattt 4630119  T
Q  178 gagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||| ||||||||||||||| ||||||||||||    
T  4630118 gagagtttgggtgacacaaaataggtagaaattag 4630084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 88 - 212
Target Start/End: Complemental strand, 18233101 - 18232975
Alignment:
Q  88 ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgt 185  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  18233101 ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttctcttaggattcattattgagagtgt 18233002  T
Q  186 gggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||||    
T  18233001 gggtgacacaaaatgggtagaaattag 18232975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 31936881 - 31936706
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 134  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31936881 caaaggaggtaactttagggttgagtgtctttgtagtgaggatctattg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 31936784  T
Q  135 aggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca--caaaatgggtagaaattag 212  Q
    |||||| |||||||||  ||||||||||||||||||||||| |||||||||||||||| |   ||||||||||||||||||    
T  31936783 aggatcaaaaagcttc--tttgtgttttctcttaggattca-ttgagagtgtgggtgatatgaaaaatgggtagaaattag 31936706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 22964007 - 22963829
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||| ||| |||||| ||||||||||||||||||||||| | |||||||  | |||||||||||||||||||||||||||||||||||||||||||||    
T  22964007 tacaaaagagctaactttagggttgagtgtctttgtagtgaagatctcttg--gattgggaaacattgtaaacaccttgggtagtgagatttcaccattg 22963910  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    ||||||||||||  |||| |||||||||||| |||||||||||  ||||||||||| |||||| |||||||||||||||||    
T  22963909 gaaggatcaaaaatttccctttgtgttttcttttaggattcattattgagagtgtgagtgacaaaaaatgggtagaaatta 22963829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 23824386 - 23824564
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||| ||| |||||| ||||||||||||||||||||||| | |||||||  | |||||||||||||||||||||||||||||||||||||||||||||    
T  23824386 tacaaaagagctaactttagggttgagtgtctttgtagtgaagatctcttg--gattgggaaacattgtaaacaccttgggtagtgagatttcaccattg 23824483  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    ||||||||||||  |||| |||||||||||| |||||||||||  ||||||||||| |||||| |||||||||||||||||    
T  23824484 gaaggatcaaaaatttccctttgtgttttcttttaggattcattattgagagtgtgagtgacaaaaaatgggtagaaatta 23824564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 24435761 - 24435938
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||||||| |||||| |||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  24435761 tacaaaggagataactttagggttgagtgtctttgt-gtgaggttctcttgag--ttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 24435857  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca-caaaatgggtagaaattag 212  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||  || ||||||||| |  ||||||||||||||||||    
T  24435858 gaaggatcaaaaagcttccttttgtgttttctcttaggattca-ttatgaatgtgggtgatataaaaatgggtagaaattag 24435938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 14521985 - 14521802
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgag-atttcaccat 130  Q
    ||||||| |||||||||| |||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14521985 atacaaatgaggtaactttagggtttaatgtctttgtagttaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagaatttcaccat 14521886  T
Q  131 tggaaggat-caaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca--caaaatgggtagaaattag 212  Q
    |||||||||  |||| ||||||||  ||||||||||||||||| | ||||||||||||||||||   |||||| |||||||||||    
T  14521885 tggaaggataaaaaatcttcctttaatgttttctcttaggattta-ttgagagtgtgggtgacatgaaaaatgtgtagaaattag 14521802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 5757267 - 5757398
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||| | ||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  5757267 tacaaaggaggtaactttagggttgagtgtctttgtatttaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 5757364  T
Q  133 gaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||||||||||||||  |||| |||||||    
T  5757365 gaaggatcaaaagcttccttccgtgtcttctctt 5757398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 22709318 - 22709187
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||| ||||  ||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  22709318 tacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggatagtgagatttcaccattg 22709221  T
Q  133 gaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||||| |||||| |||||| |||||||    
T  22709220 gaaggatcaaaaacttcctcttgtgtcttctctt 22709187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 33 - 154
Target Start/End: Original strand, 5017285 - 5017405
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||| ||| |||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  5017285 tacaaacgagataactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtaatgagatttcaccattg 5017382  T
Q  133 gaaggatc-aaaagcttcctttt 154  Q
    |||||||| ||||||||||||||    
T  5017383 gaaggatcgaaaagcttcctttt 5017405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 105 - 212
Target Start/End: Original strand, 10077027 - 10077132
Alignment:
Q  105 caccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggt 203  Q
    |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||||||||||   ||||||||||||||||||||||||    
T  10077027 caccttgggtagtgagatttgaccattggaaggatcaaaaagcttccttttgtgttttatcttaggattcatt---gagtgtgggtgacacaaaatgggt 10077123  T
Q  204 agaaattag 212  Q
    |||||||||    
T  10077124 agaaattag 10077132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 60 - 212
Target Start/End: Complemental strand, 21356318 - 21356166
Alignment:
Q  60 tgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgtt 159  Q
    |||||||||||||||| |||||||  |||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||     
T  21356318 tgtctttgtagtgaggatctcttg--ggttaggaaacattgtaaacaccttgggtagtgagatttcatcattggaagaatcaaaagcttccttttgtgtc 21356221  T
Q  160 ttctc-ttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    || || ||||| |||||  ||||||| ||| |  |||| |||||||||||||||||    
T  21356220 ttttctttagggttcattattgagagagtgagaaacac-aaatgggtagaaattag 21356166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 175
Target Start/End: Original strand, 31076724 - 31076866
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||||||| |||||  ||||||||||||||||||||||| |||  ||||  ||||| ||||| ||||||||||||| |||| |||||||||||||||    
T  31076724 atacaaaggagataactatagggttgagtgtctttgtagtgacgttgccttg--ggttgagaaactttgtaaacaccttaggtattgagatttcaccatt 31076821  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcat 175  Q
    |||| |||| ||||  || |||| |||||||||||||||||||||    
T  31076822 ggaatgatcaaaaaaatttctttagtgttttctcttaggattcat 31076866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 5674552 - 5674686
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca 129  Q
    ||||||||||| |||   |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| |||||||||||||||| | |||||||    
T  5674552 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcacca 5674649  T
Q  130 ttggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||||| |||||||||| | |||| |||||||    
T  5674650 ttggaaggatctaaagcttcctctagtgtcttctctt 5674686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 33 - 103
Target Start/End: Original strand, 21272778 - 21272846
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaa 103  Q
    |||||||| |||||||| ||||||||||||||||||||||||||||||||  |||||| ||||||||||||    
T  21272778 tacaaagggggtaactttagggttgagtgtctttgtagtgaggttctctt--gggttgcgaaacattgtaa 21272846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 86 - 192
Target Start/End: Original strand, 33721398 - 33721505
Alignment:
Q  86 ggttgggaaacatt-gtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgttttctcttaggattcatttgagagt 183  Q
    |||||||||||||| ||||||||||| | |||||||||||||  ||||||| ||| |||| ||| ||||| |||||||||||||||||||||||  ||||    
T  33721398 ggttgggaaacatttgtaaacacctttg-tagtgagatttcattattggaatgatgaaaaagctccctttagtgttttctcttaggattcatttaggagt 33721496  T
Q  184 gtgggtgac 192  Q
    ||| |||||    
T  33721497 gtgtgtgac 33721505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 115 - 189
Target Start/End: Original strand, 30517998 - 30518071
Alignment:
Q  115 agtgagatttcaccattggaaggatcaaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggt 189  Q
    ||||||||||||  |||||||||||||||| |||||||| |||||||||| || |||||||||| ||||||||||    
T  30517998 agtgagatttcattattggaaggatcaaaaacttcctttagtgttttctc-taagattcatttgtgagtgtgggt 30518071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 54 - 172
Target Start/End: Complemental strand, 5385881 - 5385765
Alignment:
Q  54 gttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggat-caaaagcttcctt 152  Q
    |||||||||||||||||||||||||  |   |||||  ||||||||| || ||||||  ||||||||||||||||||| |||||||  |||||||| |||    
T  5385881 gttgagtgtctttgtagtgaggttcatt---gggttaagaaacattgcaatcaccttaagtagtgagatttcaccattagaaggataaaaaagctttctt 5385785  T
Q  153 ttgtgttttctcttaggatt 172  Q
    | |||||| ||||| |||||    
T  5385784 tagtgtttcctcttgggatt 5385765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 10076980 - 10077027
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctc 80  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  10076980 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctc 10077027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 83
Target Start/End: Complemental strand, 18234391 - 18234341
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttg 83  Q
    ||||||||||||| ||| ||||||||||||||||||||||||| |||||||    
T  18234391 tacaaaggaggtagctttagggttgagtgtctttgtagtgaggatctcttg 18234341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 212
Target Start/End: Original strand, 5017411 - 5017447
Alignment:
Q  176 ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||||||||||||||    
T  5017411 ttgagagtgtgggtgacacaaaatgggtagaaattag 5017447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 9183304 - 9183228
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| |||||||    ||| ||||| ||  |||||||||||||||||||||||||||||    
T  9183304 caaaggaggtaactttagggttgagggtctttgattagag-ttctcctg--ggttgggaaacattgtaaacaccttgggt 9183228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 28137681 - 28137605
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    |||||||| |||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  28137681 caaaggagttaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 28137605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 33211411 - 33211382
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  33211411 gggttgggaaacattgtaaacaccttgggt 33211382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 72 - 111
Target Start/End: Complemental strand, 3039140 - 3039103
Alignment:
Q  72 gaggttctcttgagggttgggaaacattgtaaacaccttg 111  Q
    ||||||||||||  ||||||||||||||||||||||||||    
T  3039140 gaggttctcttg--ggttgggaaacattgtaaacaccttg 3039103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 154; Significance: 8e-82; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 25796091 - 25795911
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25796091 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggctctcttgagggttgggaaacaatgtaaacaccttgggtagtgagatttcaccatt 25795992  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25795991 ggaaggatcaaaaagcttccttttatgttttctcttaggattca-ttgagagtgtgggtgacacaaaatgggtagaaattag 25795911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 47649881 - 47649699
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  47649881 atacaaaggagataactttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagttagatttcaccatt 47649782  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
     |||||||| ||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  47649781 tgaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgcgagagtgggtgacacaaaatgggtagaaattag 47649699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 32 - 211
Target Start/End: Original strand, 3715777 - 3715958
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3715777 atacaaaggaggtaactttagggttgaatgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 3715876  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| ||| ||  ||||||||||||||||||||||||||||    
T  3715877 ggaaggatcaaaaagctttcttttgtgttttctcttaggattcatattgtgaaagtgggtgacacaaaatgggtagaaatta 3715958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 40592560 - 40592739
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  40592560 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 40592657  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  40592658 gaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgtgagagtgggtgacacaaaatgggtagaaattag 40592739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 21711530 - 21711352
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  21711530 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgagtagtgagatttcaccattg 21711433  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||| |||||||||||||||||    
T  21711432 gaaggatcaaaagcttccttttgtgttttctcttaggattcattattgagagtgtgggtaacac-aaatgggtagaaattag 21711352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 24694944 - 24695121
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||| |||||||||||||||||    
T  24694944 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtggtgagatttcaccattg 24695041  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||| |||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  24695042 gaatgatcaaaaagcttccttttgtgttttcttttaggattca-ttgagagtgtgggtgacacaaaatgggtagaaattag 24695121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 36029401 - 36029223
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||||||||||| || ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  36029401 tacaaaggaggtaaatttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 36029304  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||  ||| ||| |||||||||||||||||||||||||    
T  36029303 gaaggatcaaaagcttccttttgtgttttctcttaggattcatattttgagagtgagtgacacaaaatgggtagaaattag 36029223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 48438523 - 48438344
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||| ||| |||||||   ||||||||||||||||||||||||||||||||||||||||||||||    
T  48438523 tacaaaggaggtaactttagggttgagtgtctttgtagtaaggatctcttg---gttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 48438427  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||| |||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  48438426 gaatgatcaaaaagcttccttttgtgttttctcttaggattcattattgagagtgtgggtgacacaaaatgggtagaaattag 48438344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 1736082 - 1736262
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  1736082 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctattg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 1736179  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| ||||||||| |||||||||||||||||||||||||  |||||||||| ||||||||||||||||||||||||||    
T  1736180 gaaggatcaaaaagcttctttttgtgttttctcttaggattcattattgagagtgttggtgacacaaaatgggtagaaattag 1736262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 8370267 - 8370443
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  8370267 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacatcttgggtagtgagatttcaccattg 8370364  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||| ||||||||||||||||    
T  8370365 gaaggatcaaaagtttccttttgtgttttctcttaggattcatattgtgagagtgggtgacac-aaatgggtagaaatta 8370443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 47923682 - 47923862
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||| ||||||||||||||||||||  |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  47923682 tacaaaggaggtaactttaggattgagtgtctttgtagtgagaatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 47923779  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| |||||||||||||||||||||||| ||||||||||  |||||||||||| |||||||||||||||| |||||||    
T  47923780 gaaggatcaaaaagcttccttttgtgttttctcgtaggattcattattgagagtgtggatgacacaaaatgggtataaattag 47923862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 6794493 - 6794670
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  6794493 tacaaaggaggtaactttagggttgagtgtcattgtagtgaggttctcttgag--ttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 6794590  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||| || ||||||||||||||||| |||||||||||| ||||| ||| ||| ||||||||||| |||||||||||||||||    
T  6794591 gaatgaacaaaagcttccttttgtattttctcttagggttcatattgtgagagtgggtgacac-aaatgggtagaaattag 6794670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 35925788 - 35925609
Alignment:
Q  33 tacaaaggag--gtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccat 130  Q
    ||||||||||  ||||||| |||||||| |||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||||||||||||    
T  35925788 tacaaaggagatgtaactttagggttgaatgtctttgtagtgaggatcttttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccat 35925691  T
Q  131 tggaaggatcaaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| |||||||||||||||||    
T  35925690 tggaaggatcaaaagcttccttttgtgttttctcttaggattcatattgtgagagtgggtgacac-aaatgggtagaaattag 35925609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 16264657 - 16264479
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  16264657 tacaaaggaggtaactttagggttgagtgtctttgtaatgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 16264560  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||| |||||||||| |||||  ||||||| |||||| |||| ||||| |||||||||||    
T  16264559 gaaggatcaaaagcttccttttgtgtcttctcttagggttcatcattgagagagtgggtaacac-aaatgtgtagaaattag 16264479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 33 - 191
Target Start/End: Original strand, 3323469 - 3323625
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  3323469 tacaaaggaggtaactttagggttgagtgtctttatagtgaggttctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 3323566  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtga 191  Q
    ||| |||| |||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  3323567 gaatgatcaaaaagcttccttttgtgttttctcttagaattca-ttgagagtgtgggtga 3323625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 36 - 212
Target Start/End: Complemental strand, 26299293 - 26299118
Alignment:
Q  36 aaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaa 135  Q
    |||||||||||||| |||||||| |||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26299293 aaaggaggtaactttagggttgaatgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaa 26299196  T
Q  136 ggatc-aaaagcttcc-ttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
      ||| |||||||||| |||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||    
T  26299195 ttatcaaaaagcttcctttttgtgttttctcttaggatt-aattgagattgtgggtgacacaaaatgggtagaaattag 26299118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 40844963 - 40844781
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatt-----tcac 127  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||| ||  |||||| |||||||||||||||||||| ||| |||||||     | ||    
T  40844963 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctatt--gggttgagaaacattgtaaacaccttgagtaatgagatttgacctgac 40844866  T
Q  128 cattggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40844865 cattggaaggatcaaaaagcttccttttgtgttttctcttaggattca-ttgagagtgtgggtgacacaaaatgggtagaaattag 40844781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 8126938 - 8126761
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||| | ||||||| |  |||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||||| |||||    
T  8126938 tacaaagaaagtaactttacagttgagtgtctttgtagtgaggttttcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcatcattg 8126841  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacac-aaaatgggtagaaatta 211  Q
    |||||||| ||||||||| ||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||    
T  8126840 gaaggatcaaaaagcttctttttgtgttttctcttaagattca-ttgagagtgtgggtgacacaaaaatgggtagaaatta 8126761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 27974730 - 27974909
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  27974730 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggtcgggaaacattgtaaacaccttgggtagtgagatttcaccattg 27974827  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc-ttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||  |||||||  ||||  |||| |||||||||||||||||    
T  27974828 gaaggatcaaaagcttccttttgtgtcttctctttagggttcattattgagagaatgggaaacac-aaatgggtagaaattag 27974909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 27986234 - 27986413
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  27986234 tacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 27986331  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc--ttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||| |||||  ||||| || || ||||||| |||||  |||| |||||||||||||||||    
T  27986332 gaaggatcaaaagcttccttttgtgtcttctcttttagggttgatattgagagagtgggaaacac-aaatgggtagaaattag 27986413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 18552716 - 18552840
Alignment:
Q  88 ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtg 186  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||    
T  18552716 ttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaaacttccttttgtgttttctcttaggattca-ttgagagtgtg 18552814  T
Q  187 ggtgacacaaaatgggtagaaattag 212  Q
    ||||||||||||||||||||||||||    
T  18552815 ggtgacacaaaatgggtagaaattag 18552840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 1417269 - 1417448
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||  |||||||||||||||||||||| || |||||||||||||||||||||    
T  1417269 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggttatcttg--ggttgggaaacattgtaaacactttaggtagtgagatttcaccattg 1417366  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca--caaaatgggtagaaattag 212  Q
     ||||||| ||||| || ||||||||||||||||||||||||| ||| |||||||||||| |   ||||||||||||||||||    
T  1417367 aaaggatcaaaaagttttcttttgtgttttctcttaggattca-ttgggagtgtgggtgatatgaaaaatgggtagaaattag 1417448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 33 - 175
Target Start/End: Original strand, 39032333 - 39032472
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||||||||||||||||||||| | ||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  39032333 tacaaaggaggtaactttagggttgagtgtctttgtagtgagat-ctcttg--ggttggtaaacattgtaaacaccttgggtagtgagatttcaccattg 39032429  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat 175  Q
    |||||||||||||||||||||||||| |||||||||| |||||    
T  39032430 gaaggatcaaaagcttccttttgtgtcttctcttagggttcat 39032472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 33386453 - 33386633
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||  ||||| ||||||||||||||||||||||||| |||||||  ||||| |||||||||||||||||||||||||||||||||||||||||    
T  33386453 tacaaaggagagaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgagaaacattgtaaacaccttgggtagtgagatttcaccattg 33386550  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc--ttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||| |||||  ||||| |||||  ||||||| |||||  |||| |||||||||||||||||    
T  33386551 gaaggatcaaaagcttccttttgtgtcttctcttttagggttcattattgagagagtgggaaacac-aaatgggtagaaattag 33386633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 36 - 212
Target Start/End: Original strand, 3328138 - 3328314
Alignment:
Q  36 aaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaa 135  Q
    ||||||| |||||| |||||||| ||||||||||||||| ||||||||  |||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  3328138 aaaggagataactttagggttgaatgtctttgtagtgagcttctcttg--ggttggaaaacattgtaaacaccttgggtagtgagatttcagcattggaa 3328235  T
Q  136 ggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca--caaaatgggtagaaattag 212  Q
    ||||| |||| |||||||||||||||||||||||||| || |||||||||||||||| |   ||||||||||||||||||    
T  3328236 ggatcaaaaaacttccttttgtgttttctcttaggataca-ttgagagtgtgggtgatatgaaaaatgggtagaaattag 3328314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 33 - 193
Target Start/End: Original strand, 25929174 - 25929333
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||| |||||||||||||| ||||||||||||||||||||||| |    
T  25929174 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttga--gttggaaaacattgtaaaca-cttgggtagtgagatttcaccatcg 25929270  T
Q  133 gaaggatc-aaaagcttc--cttttgtgttttctcttaggattcatttgagagtgtgggtgaca 193  Q
    |||||||| |||||||||   |||||||||||||||||||||||| ||| ||||||||||||||    
T  25929271 gaaggatcaaaaagcttctttttttgtgttttctcttaggattca-ttgtgagtgtgggtgaca 25929333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 85 - 212
Target Start/End: Original strand, 30709617 - 30709747
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaa-agcttccttttgtgttttctcttaggattcat--ttgaga 181  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||| ||||||| ||||||||||||||||||||||||||||||||  ||||||    
T  30709617 gggttgggaaacattgtaaacaccttggggagtgagatttcatcattggaatgatcaaatagcttccttttgtgttttctcttaggattcattattgaga 30709716  T
Q  182 gtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||||||||| |||||||||||||||    
T  30709717 gtgtgggtgacacaagatgggtagaaattag 30709747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 32 - 176
Target Start/End: Complemental strand, 21353876 - 21353728
Alignment:
Q  32 atacaaaggaggtaacttgagggtt--gagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgag-atttcacc 128  Q
    |||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| || |||||    
T  21353876 atacaaaggaggtaactttagggttttgagtgtctttgtagtgaggttctcttgagggttgggaaacatcgtaaacactttgggtagtgagaatgtcacc 21353777  T
Q  129 attggaaggat-caaaagcttccttttgtgttttctcttaggattcatt 176  Q
    ||||||||||| |||||| ||||||| ||||||||||||| ||||||||    
T  21353776 attggaaggatccaaaagtttcctttagtgttttctcttaagattcatt 21353728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 33 - 191
Target Start/End: Complemental strand, 37466603 - 37466447
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| || | |||||||||||||||||||||||||||   |||||||||||||||||||||| |||||| |||||||||||||||||    
T  37466603 tacaaaggaggtaactttagagctgagtgtctttgtagtgaggttctctta--ggttgggaaacattgtaaacactttgggttgtgagatttcaccattg 37466506  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtga 191  Q
    ||| |||| ||||||||||||||||||||| | |||||||||| ||||||||| ||||||    
T  37466505 gaaagatcgaaaagcttccttttgtgttttattttaggattca-ttgagagtgcgggtga 37466447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 27453266 - 27453137
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||| ||||| ||||||||||||||  ||||||||| |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  27453266 tacaaaggagggaactttagggttgagtgtct--gtagtgaggatctcttg--ggttggcaaacattgtaaacaccttgggtagtgagatttcaccattg 27453171  T
Q  133 gaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||||||||||||||||||| |||||||    
T  27453170 gaaggatcaaaagcttccttttgtgtcttctctt 27453137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 26928377 - 26928508
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||| |||| ||||  ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  26928377 tacaaacgagggaactctagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtaatgagatttcaccattg 26928474  T
Q  133 gaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||||||||||||| |||||| |||||||    
T  26928475 gaaggatcaaaagcttcctcttgtgtcttctctt 26928508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 32143631 - 32143500
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||| ||||  ||||||||||||||||||||||| | |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  32143631 tacaaaggagggaactctagggttgagtgtctttgtagtgatgatctcttg--ggttggaaaacattgtaaacaccttgggtagtgagatttcaccattg 32143534  T
Q  133 gaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||||||||||||| |||||| |||||||    
T  32143533 gaaggatcaaaagcttcctcttgtgtcttctctt 32143500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 147
Target Start/End: Complemental strand, 37725983 - 37725871
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| |||||||  ||| |||||||||| |||||||||||| |||||||||||||||||||    
T  37725983 tacaaaggaggaaactttagggttgagtgtctttgtagtgaggatctcttg--ggtggggaaacattataaacaccttggatagtgagatttcaccattg 37725886  T
Q  133 gaaggatcaaaagct 147  Q
     ||||||||||||||    
T  37725885 aaaggatcaaaagct 37725871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 1306257 - 1306127
Alignment:
Q  36 aaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccattgg 133  Q
    |||||||| ||||  || |||||||||||||||||||||| |||||||  ||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  1306257 aaaggagggaactctagagttgagtgtctttgtagtgaggatctcttg--ggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattgg 1306160  T
Q  134 aaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||  ||||||||| |||||| |||||||    
T  1306159 aaggatcttaagcttcctcttgtgtcttctctt 1306127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 126
Target Start/End: Original strand, 4386754 - 4386846
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttca 126  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||| ||||||||||||||    
T  4386754 atacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctctt--gggttgggaaacattgtaatcaccttgagtagtgagatttca 4386846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 27027014 - 27026925
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagattt 124  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| ||||||  || | |||||||||||||||||||||||||||||||||||    
T  27027014 tacaaaggaggtaactttagggttgagtgtctttgtactgaggatctctt--ggatagggaaacattgtaaacaccttgggtagtgagattt 27026925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 33 - 124
Target Start/End: Complemental strand, 27038359 - 27038270
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagattt 124  Q
    |||||||||| |||||| ||||||||||| ||||||||||||| ||||||  |||| ||||||||||||||||||||||||| |||||||||    
T  27038359 tacaaaggagataactttagggttgagtgcctttgtagtgaggatctctt--gggtagggaaacattgtaaacaccttgggtggtgagattt 27038270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 51 - 114
Target Start/End: Complemental strand, 23392167 - 23392106
Alignment:
Q  51 agggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  23392167 agggttgagtgtctttgtagtgaggttctctt--gggttgggaaacattgtaaacaccttgggt 23392106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 23410603 - 23410529
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttg 111  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  23410603 caaaggagagaactttagggttgagtgtctttgtagtgaggttctctt--gggttggaaaacattgtaaacaccttg 23410529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 98 - 192
Target Start/End: Original strand, 5366164 - 5366260
Alignment:
Q  98 ttgtaaacaccttgggtagtgagatttcacca-ttggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgac 192  Q
    |||||||||||||||||||| ||||||||  | ||||||||||| ||||| ||||||| |||||||| ||||||||||||||   ||||||||||||    
T  5366164 ttgtaaacaccttgggtagtaagatttcaataattggaaggatcgaaaagtttcctttagtgttttcgcttaggattcatttattagtgtgggtgac 5366260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 2671368 - 2671503
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtga-gatttcacca 129  Q
    ||||||||||| |||   |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||| || ||||  |    
T  2671368 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcatta 2671465  T
Q  130 -ttggaaggatcaaaagcttccttttgtgttttctctt 166  Q
     ||||||||||| |||||||||| | |||| |||||||    
T  2671466 gttggaaggatctaaagcttcctctagtgtcttctctt 2671503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 40372578 - 40372713
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtga-gatttcacca 129  Q
    ||||||||||| |||   |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||| || ||||  |    
T  40372578 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcatta 40372675  T
Q  130 -ttggaaggatcaaaagcttccttttgtgttttctctt 166  Q
     ||||||||||| |||||||||| | |||| |||||||    
T  40372676 gttggaaggatctaaagcttcctctagtgtcttctctt 40372713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 8477661 - 8477544
Alignment:
Q  51 agggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtga-gatttcacca-ttggaaggatcaaaagc 146  Q
    |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||| || ||||  | ||||||||||| |||||    
T  8477661 agggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagc 8477564  T
Q  147 ttccttttgtgttttctctt 166  Q
    ||||| | |||| |||||||    
T  8477563 ttcctctagtgtcttctctt 8477544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 32890998 - 32891074
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| ||||||| | |  |||||||||| ||  ||||||||||||||||||||||||||    
T  32890998 caaaggaggtaactttagggttgagggtctttg-attagggttctcttgggg--tgggaaacattgtaaacaccttgggt 32891074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 39153634 - 39153558
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  39153634 caaaggaggtaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 39153558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 9091083 - 9091170
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 120  Q
    ||||||||||| |||   |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  9091083 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtatctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 9091170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 21156685 - 21156594
Alignment:
Q  88 ttgggaaacattg-taaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgttttctcttaggattcattt 177  Q
    ||||||||||||| |||||||||| | || ||||||||||  |||| || |||||||| |||| |||| |||||||||||||||| ||||||    
T  21156685 ttgggaaacattggtaaacaccttagttaatgagatttcattattgaaaagatcaaaaagcttgctttagtgttttctcttaggaatcattt 21156594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 37 - 114
Target Start/End: Complemental strand, 5236727 - 5236653
Alignment:
Q  37 aaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  5236727 aaggaggtaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 5236653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 40735278 - 40735352
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 112  Q
    ||||||||||||||| ||||||||| ||||||| | | | ||||||||  ||||| ||||||||||||||||||||||    
T  40735278 caaaggaggtaactttagggttgagggtctttg-attaaagttctctt--gggttaggaaacattgtaaacaccttgg 40735352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 166
Target Start/End: Complemental strand, 7167559 - 7167424
Alignment:
Q  34 acaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa---cattgtaaacaccttgggtagtga-gatttcacca 129  Q
    |||||||||| |||   |||||||||||||||||| | |||  |||||||  ||||||||||   |||||||| ||||||||||||||| || ||||  |    
T  7167559 acaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaaacattgtaatcaccttgggtagtgaggagttcatta 7167462  T
Q  130 -ttggaaggatcaaaagcttccttttgtgttttctctt 166  Q
     ||||||||||| |||||||||| | |||| |||||||    
T  7167461 gttggaaggatctaaagcttcctctagtgtcttctctt 7167424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 120
Target Start/End: Original strand, 8738864 - 8738932
Alignment:
Q  52 gggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 120  Q
    ||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  8738864 gggttgagtgtctttgtagagagtatctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 8738932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 29812958 - 29813034
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| ||||||| | | | ||||||||  |||||||||| |||||||||||| ||||||    
T  29812958 caaaggaggtaactttagggttgagggtctttg-attaaagttctctt--gggttgggaagcattgtaaacacattgggt 29813034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 40734393 - 40734469
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    |||||||| |||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  40734393 caaaggagataactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 40734469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 9581225 - 9581254
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  9581225 gggttgggaaacattgtaaacaccttgggt 9581254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 19684115 - 19684086
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  19684115 gggttgggaaacattgtaaacaccttgggt 19684086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 29682301 - 29682330
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  29682301 gggttgggaaacattgtaaacaccttgggt 29682330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 29810810 - 29810839
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  29810810 gggttgggaaacattgtaaacaccttgggt 29810839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 44331487 - 44331516
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  44331487 gggttgggaaacattgtaaacaccttgggt 44331516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 151; Significance: 5e-80; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 10282063 - 10281881
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10282063 atacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttgagggttgtgaaacattgtaaacaccttgggtagtgagatttcaccatt 10281964  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||| |||||||| |||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||    
T  10281963 ggaaggatcaaaaagctttcttttgtgttttctcttaggattcatattgtgagtgtgggtgacacaaaatgggtagaaattag 10281881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 3880611 - 3880429
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  3880611 atacaaaggaggtaacttgagagttgagtgtccttgtagtgaggttctcttgagggttgagaaacattgtaaacacattgggttgtgagatttcaccatt 3880512  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||| |||||||||||||||| ||||||| |||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  3880511 ggaaggatcaaaaagcttccttttgttttttctcctaggattcatattgtgagagtgggtgacacaaaatgggtagaaattag 3880429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 129; E-Value: 6e-67
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 28832565 - 28832386
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  28832565 tacaaaggaggtaactttagagttgagtgtctttgtagtgaggttctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 28832468  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca--caaaatgggtagaaattag 212  Q
    |||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |   ||||||||||||||||||    
T  28832467 gaaggatcaaaaagcttccttttgtgttttctcttaggattca-ttgagagtgtgggtgatatgaaaaatgggtagaaattag 28832386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 11181621 - 11181799
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||    
T  11181621 tacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttg--ggttgggaaacattgtaaacaccttgggtagtgaaatttcaccattg 11181718  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca-caaaatgggtagaaattag 212  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||    
T  11181719 gaaggatcaaaaagcttccttttgtgttttctcttaggattca-ttgtgagtgtgggtgacatgaaaatgggtagaaattag 11181799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 11916761 - 11916939
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||||||| |||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  11916761 tacaaaggaggtaactttagggttgagtttctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 11916858  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattca---tttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||| |||||||||||||||||||||||| ||||   |||||||  |||||||||||||||||||||||||||||    
T  11916859 gaaggatcaaaaacttccttttgtgttttctcttagggttcatcgtttgaga--gtgggtgacacaaaatgggtagaaattag 11916939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 35 - 212
Target Start/End: Complemental strand, 19589051 - 19588876
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 134  Q
    |||||||||||| || ||||||||||||||||||||||||| |||||||  ||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  19589051 caaaggaggtaattttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacatcttgggcagtgagatttcaccattgga 19588954  T
Q  135 aggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||| |||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||| |||||||||||||    
T  19588953 aggatcaaaaatcttccttttgtgttttctcttaggattca-ttgagattgtgggtgacacaaaaagggtagaaattag 19588876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 35 - 191
Target Start/End: Original strand, 31300386 - 31300540
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 134  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31300386 caaaggaggtaactttaaggttgagtgtctttgtagtgaggttctcttg--ggttgagaaacattgtaaacaccttgggtagtgagatttcaccattgga 31300483  T
Q  135 aggatcaaaa-gcttccttttgtgttttctcttaggattcatttgagagtgtgggtga 191  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||    
T  31300484 aggatcaaaaggcttccttttgtgttttctcttaggattca-ttgagagtgtgggtga 31300540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 14520538 - 14520359
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  14520538 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggatagtgagatttcaccattg 14520441  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc-ttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||  ||||||| |||||| |||| |||||||||||||||||    
T  14520440 gaaggatcaaaagcttccttttgtgtcttctctttagggttcataattgagagagtgggtaacac-aaatgggtagaaattag 14520359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 24553316 - 24553495
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||     
T  24553316 tacaaaggaggtaacttaagggttgagtgtctttgtagtgaggttctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccatta 24553413  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggt--gacacaaaatgggtagaaattag 212  Q
    |||||||| |||||||||||||||||||||||||||| ||||| || |||||||||||   | | ||||||||||||||||||    
T  24553414 gaaggatcaaaaagcttccttttgtgttttctcttagaattca-ttaagagtgtgggtcatataaaaaatgggtagaaattag 24553495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 17003748 - 17003927
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||||||| |||||| |||||||| ||||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||||||||    
T  17003748 tacaaaggagataactttagggttgaatgtctttgtagtgaggttctcttg--ggtttggaaacattgtaaacaccttgggtagtgagatttcaccattg 17003845  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||| |||| |  |||||||||||||||||    
T  17003846 gaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgtgagagtgagtgaaattaaatgggtagaaattag 17003927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 9353121 - 9353300
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||| |||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  9353121 tacaaaggaggtaactttagggttaagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 9353218  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc-ttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||| ||||| ||| | |||||  ||||||| |||||  |||| |||||||||||||||||    
T  9353219 gaaggatcaaaagcttccttttgtgtcttctctttaaggttcattattgagagagtgggaaacac-aaatgggtagaaattag 9353300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 12083966 - 12084143
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcacca-tt 131  Q
    ||||||||||||||||| |||||||||||||||| |||||||| ||||||  ||||||| ||||||| ||||||||||||||||||||| ||||||| ||    
T  12083966 tacaaaggaggtaactttagggttgagtgtctttatagtgaggatctctt--gggttggtaaacattttaaacaccttgggtagtgagaattcaccattt 12084063  T
Q  132 ggaaggatcaaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| ||||||||||||||||||||| ||||||||||||| ||| ||| ||||||||||| |||||||||||||||||    
T  12084064 ggaaggat-aaaagcttccttttgtgttttttcttaggattcatattgtgagagtgggtgacac-aaatgggtagaaattag 12084143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 15464842 - 15464711
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||| ||| ||||| ||||||||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||||||||    
T  15464842 tacaaagaaggaaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacatcgtaaacaccttgggtagtgagatttcaccattg 15464745  T
Q  133 gaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||||||||||||||||||| |||||||    
T  15464744 gaaggatcaaaagcttccttttgtgtcttctctt 15464711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 35 - 211
Target Start/End: Original strand, 36932139 - 36932316
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 134  Q
    ||||||||| ||||| |||||||||||||||| |||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36932139 caaaggagggaactttagggttgagtgtctttatagtgatgatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 36932236  T
Q  135 aggatcaaaagcttccttttgtgttttc--tcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    ||||||||||||||||| |||||| |||  | ||||| |||||  ||||||| |||||  |||| ||||||||||||||||    
T  36932237 aggatcaaaagcttcctcttgtgtcttctgttttagggttcattattgagagagtgggaaacac-aaatgggtagaaatta 36932316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 185
Target Start/End: Original strand, 7160693 - 7160843
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||  || |||||||||||||||| ||||||||  |||||||||||| |||||    
T  7160693 tacaaatgaggtaactttagggttgagtgtctttgtagtgaggttctctt--ggattgggaaacattgtaatcaccttggacagtgagatttcatcattg 7160790  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgt 185  Q
    |||||||| ||||||||| |||| ||||||||||||||||||| ||||||||||    
T  7160791 gaaggatcaaaaagcttcattttatgttttctcttaggattca-ttgagagtgt 7160843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 38219710 - 38219577
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccat 130  Q
    ||||||||||| ||||  ||||||||||||||||||||||||| |||||||  ||||||||||  |||||||||||||||||||||||||||||||||||    
T  38219710 tacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccat 38219613  T
Q  131 tggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||| |||||||||| |||||| |||||||    
T  38219612 tggaaggatctaaagcttcctcttgtgtcttctctt 38219577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 33 - 144
Target Start/End: Original strand, 42127159 - 42127268
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||||||  ||||| ||||||||||| |||||||||||||||||||||||||||||    
T  42127159 tacaaaggaggtaactttaaggttgagtatctttgtagtgaggttctcttg--ggttgagaaacattgtatacaccttgggtagtgagatttcaccattg 42127256  T
Q  133 gaaggatcaaaa 144  Q
    ||||||||||||    
T  42127257 gaaggatcaaaa 42127268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 191
Target Start/End: Original strand, 42127266 - 42127355
Alignment:
Q  102 aaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtga 191  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||||||||||||||    
T  42127266 aaacaccttgggtagtgagatttcaccattggaaggatcaaaaagctttcttttgtgttttctcttaggattca-ttgagagtgtgggtga 42127355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 35387974 - 35387841
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccat 130  Q
    ||||||||||| ||||  |||||||||||||||||||| |||| |||||||  |||||| |||  |||||||| ||||||||||||||||||||||||||    
T  35387974 tacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttg--ggttggaaaaaacattgtaatcaccttgggtagtgagatttcaccat 35387877  T
Q  131 tggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||| ||| |||||| | |||| |||||||    
T  35387876 tggaaggatctaaaacttcctctagtgtcttctctt 35387841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 32 - 211
Target Start/End: Original strand, 33030727 - 33030907
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||| |||||||||| |||||||||| | ||||||  ||||||||||||  ||||| |||| ||||||| || ||||||||||||||||||||||||    
T  33030727 atacaaaagaggtaactttagggttgagtat-tttgtaacgaggttctcttg--ggttgagaaatattgtaatcatcttgggtagtgagatttcaccatt 33030823  T
Q  132 ggaaggatcaaaagcttccttttgtgt-----tttctcttaggattcatttgagagtgtgggtgac--acaaaatgggtagaaatta 211  Q
    |  || |  ||||||||||||| ||||     |||||||||||||||| ||||||||||| |||||    |||||||||||||||||    
T  33030824 g--agaacaaaaagcttcctttagtgttttaatttctcttaggattca-ttgagagtgtgagtgacttgaaaaatgggtagaaatta 33030907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 24136161 - 24136027
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca 129  Q
    ||||||||||| |||   ||||||||||||||||||||  ||  |||||||  ||||||||||  |||||||| |||||||||||||||| | |||||||    
T  24136161 tacaaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcacca 24136064  T
Q  130 ttggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||||| |||||||||| | |||| |||||||    
T  24136063 ttggaaggatctaaagcttcctctagtgtcttctctt 24136027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 2630460 - 2630397
Alignment:
Q  114 tagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgttttctcttaggattcatt 176  Q
    |||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||||||||||||    
T  2630460 tagtgaaatttcaccattgaaaggatcaaaaagcttcctttagtgttttctcttaggattcatt 2630397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 110
Target Start/End: Complemental strand, 3075931 - 3075859
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacacctt 110  Q
    ||||||||||||||| ||||||||| ||||||| | | | |||||||||  |||||||||||||||||||||||||    
T  3075931 caaaggaggtaactttagggttgagggtctttg-attaaagttctcttg--ggttgggaaacattgtaaacacctt 3075859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 177
Target Start/End: Complemental strand, 5611398 - 5611307
Alignment:
Q  88 ttgggaaacattg-taaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgttttctcttaggattcattt 177  Q
    ||||||||||||| |||||||||| | || ||||||||||  |||| || |||||||| |||| |||| |||||||||||||||| ||||||    
T  5611398 ttgggaaacattggtaaacaccttagttaatgagatttcattattgaaaagatcaaaaagcttgctttagtgttttctcttaggaatcattt 5611307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 166
Target Start/End: Complemental strand, 31180527 - 31180393
Alignment:
Q  34 acaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtga-gatttcacca- 129  Q
    |||||||||| |||   |||||||||||||||||| | |||  |||||||  ||||||||||  |||||||| ||||||||||||||| || ||||  |     
T  31180527 acaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattag 31180430  T
Q  130 ttggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||||| |||||||||| | |||| |||||||    
T  31180429 ttggaaggatctaaagcttcctctagtgtcttctctt 31180393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 45 - 192
Target Start/End: Complemental strand, 6742148 - 6742003
Alignment:
Q  45 aacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtag--tgagatttcaccattggaaggatcaa 142  Q
    ||||| |||||||||||||||| || ||| |||||||||||  ||| |||||||| ||  ||  |||| ||   |||||||||||||||| ||| |||||    
T  6742148 aactttagggttgagtgtctttatactgaagttctcttgag--ttgagaaacattatattcattttggatataatgagatttcaccattgaaagaatcaa 6742051  T
Q  143 aa-gcttccttttgtgttttctcttaggattcatttgagagtgtgggtgac 192  Q
    || | |||  | |||||||| |||||||||||| |||||||||||||||||    
T  6742050 aaagattc--tctgtgttttttcttaggattca-ttgagagtgtgggtgac 6742003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 533664 - 533740
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||| | |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  533664 caaaggaggtaactttagggttgggggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 533740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 5887689 - 5887613
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| || ||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  5887689 caaaggaggtaactttagggttgagggtatttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 5887613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 5007446 - 5007494
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgag 85  Q
    ||||||||||||||| |||||||||| ||||||  ||||||||||||||||    
T  5007446 caaaggaggtaactttagggttgagtatctttg--gtgaggttctcttgag 5007494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 19806289 - 19806355
Alignment:
Q  45 aacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  19806289 aacttgagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 19806355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 101 - 165
Target Start/End: Complemental strand, 30900108 - 30900043
Alignment:
Q  101 taaacaccttgggtagtgagatttcaccattggaaggat-caaaagcttccttttgtgttttctct 165  Q
    ||||||||||||||||||||||||||  |  ||||||||  |||||||| |||| |||||||||||    
T  30900108 taaacaccttgggtagtgagatttcattagaggaaggataaaaaagctttctttagtgttttctct 30900043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 145; Significance: 2e-76; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 6127534 - 6127351
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  6127534 atacaaaagagataacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacattttgggtagtgagatttcaccatt 6127435  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||| |||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  6127434 ggaaggatcaaaaagctttcttttgtgttttctcttaggattcattattgagagtgtgggtgacacaaaatgggtagaaattag 6127351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 32 - 212
Target Start/End: Original strand, 26403014 - 26403197
Alignment:
Q  32 atacaaaggaggtaacttg-agggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccat 130  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26403014 atacaaaggaggtaacttttagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccat 26403113  T
Q  131 tggaaggatc-aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||| ||| ||| ||| |||||||||||||||||||||||||    
T  26403114 tggaaggatcaaaaagcttccttttgtgttttctcttatgattcatattgtgagagtgagtgacacaaaatgggtagaaattag 26403197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 4696397 - 4696574
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  4696397 tacaaaggagataactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 4696494  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||| |||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  4696495 gaaagatcaaaaagcttccttttgtgttttctcttaggattca-atgagagtgtgggtgacacaaaatgggtagaaattag 4696574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 5702269 - 5702450
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||| ||||||||||||||||||||||||||||||||||||    
T  5702269 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaatattgtaaacaccttgggtagtgagatttcaccattg 5702366  T
Q  133 gaaggatc-aaaagcttccttttgtg-ttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||| |||| ||||||||||||||||| ||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||    
T  5702367 gaatgatcaaaaagcttccttttgtgtttttctcttaggattcattattgagagtgtgggtgactcaaaatgggtagaaattag 5702450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 23799365 - 23799544
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||||||||||||||||| |||| |||||||  ||||||| |||||||||||||||||| |||| |||||||||||||||    
T  23799365 tacaaaggaggtaactttagggttgagtgtctttgtagagaggatctcttg--ggttggggaacattgtaaacaccttgagtagggagatttcaccattg 23799462  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| |||||||||||||||||||||| |||||||||||| ||| ||  |||||||||||||||||||||||||||||    
T  23799463 gaaggatcaaaaagcttccttttgtgttttcccttaggattcatattgtgacagtgggtgacacaaaatgggtagaaattag 23799544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 4456336 - 4456158
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||||||||||| |||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||||||||||     
T  4456336 tacaaaggaggtaactttagggttgagtgtctctgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccatta 4456239  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc-ttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||  ||||||| |||||| |||| ||||||||||||||||    
T  4456238 gaaggatcaaaagcttccttttgtgtcttctctttagggttcatcattgagagagtgggtaacac-aaatgggtagaaatta 4456158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 7412648 - 7412470
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||||||||||||||||| |||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  7412648 tacaaaggaggtaactttagggttgagtgtctttgtagagaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 7412551  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
     ||||||||||||||||||||| ||| |||||||||| |||||  ||||||| |||||  |||| |||||||||||||||||    
T  7412550 aaaggatcaaaagcttccttttatgtcttctcttagggttcattattgagagagtgggaaacac-aaatgggtagaaattag 7412470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 19752185 - 19752361
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 134  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||  ||||| |||| |||||||||||||||||||||||||||||| |||||||    
T  19752185 caaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttg--ggttgtgaaatattgtaaacaccttgggtagtgagatttcatcattgga 19752282  T
Q  135 aggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca--caaaatgggtagaaattag 212  Q
    |||||| |||||||||| ||||||||||||||||||||||| |||||||||||||||| |   ||||||||||||||||||    
T  19752283 aggatcaaaaagcttcc-tttgtgttttctcttaggattca-ttgagagtgtgggtgatatgaaaaatgggtagaaattag 19752361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 33 - 197
Target Start/End: Original strand, 19175543 - 19175707
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  | |||||||||||||||||||||||||||||||||||||||| ||||    
T  19175543 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--gattgggaaacattgtaaacaccttgggtagtgagatttcactattg 19175640  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaa 197  Q
    ||||||||||||| |||||||||||| |||||||||| |||||  ||||||| |||||  |||||||    
T  19175641 gaaggatcaaaagtttccttttgtgtcttctcttagggttcatcattgagagagtgggaaacacaaa 19175707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 36 - 211
Target Start/End: Complemental strand, 3051425 - 3051250
Alignment:
Q  36 aaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaa 135  Q
    |||||||  ||||| |||||||||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3051425 aaaggagagaactttagggttgagtgtctttgtagtggggttctcttgag--ttgggaaacattgtaaacatcttgggtagtgagatttcaccattggaa 3051328  T
Q  136 ggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca--caaaatgggtagaaatta 211  Q
     |||| ||||||||||||||||| |||||||||||||||| ||||||||||  ||||||   |||||||||||||||||    
T  3051327 agatcaaaaagcttccttttgtgctttctcttaggattca-ttgagagtgtaagtgacatgaaaaatgggtagaaatta 3051250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 33 - 192
Target Start/End: Complemental strand, 28307870 - 28307713
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| || |||||||||||||||||   |||||||||   |||||||||||||||| ||||||||||||||||||||||||| ||||    
T  28307870 tacaaaggaggtaactttagagttgagtgtctttgtagcacggttctctta--ggttgggaaacattgttaacaccttgggtagtgagatttcacaattg 28307773  T
Q  133 gaaggat-caaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgac 192  Q
    |||||||  |||||||| |||||||||||||| ||||||||||  ||||||||||||||||    
T  28307772 gaaggataaaaaagctttcttttgtgttttcttttaggattca-gtgagagtgtgggtgac 28307713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 51 - 192
Target Start/End: Original strand, 7492980 - 7493119
Alignment:
Q  51 agggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttc 149  Q
    ||||||||| |  ||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||    
T  7492980 agggttgagagcatttgtagtgaggttctcttg--gattgggaaacattgtaaacaccttgggtagtgagatttcacaattagaaggatcaaaaagcttc 7493077  T
Q  150 cttttgtgttttctcttaggattcatttgagagtgtgggtgac 192  Q
    |||| ||||||| |||||||||| | |||||||||||||||||    
T  7493078 ctttagtgttttttcttaggattta-ttgagagtgtgggtgac 7493119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 9765639 - 9765720
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  9765639 atacaaaggaggtaacttgagggttgagtgtctttg-agtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 9765720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 1261739 - 1261872
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccat 130  Q
    ||||||||||| ||||  |||||||||||||||||||| |||| |||||||  ||||||||||  |||||||| ||||||||||||||||||||||||||    
T  1261739 tacaaaggagggaactctagggttgagtgtctttgtagagagggtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgagatttcaccat 1261836  T
Q  131 tggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||| |||||||||| | |||| |||||||    
T  1261837 tggaaggatctaaagcttcctctagtgtcttctctt 1261872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 166
Target Start/End: Original strand, 31071035 - 31071147
Alignment:
Q  54 gttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttcct 151  Q
    |||||||||||||||||||||| |||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  31071035 gttgagtgtctttgtagtgaggatctcttg--ggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcttaagcttcct 31071132  T
Q  152 tttgtgttttctctt 166  Q
     |||||| |||||||    
T  31071133 cttgtgtcttctctt 31071147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 5990351 - 5990507
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||||  |||||||| ||||||||||||||||  |||||||||||||||  |||||||||||||||||| || ||||| | ||||||||||||||||    
T  5990351 atacaaagacggtaactttagggttgagtgtcttt--agtgaggttctcttg--ggttgggaaacattgtaatcatcttggtttgtgagatttcaccatt 5990446  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgac 192  Q
     ||| | || |||||||| |||| |||||||||||||||||||| |||| ||||||||||||    
T  5990447 cgaaaggtcaaaaagctttctttagtgttttctcttaggattca-ttgaaagtgtgggtgac 5990507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 26288202 - 26288069
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccat 130  Q
    |||||||| || ||||  |||||||| ||||||||||| |||  |||||||||  ||||||||  |||||||||||||||||||||||||||||||||||    
T  26288202 tacaaaggggggaactctagggttgaatgtctttgtagagagaatctcttgag--ttgggaaaaacattgtaaacaccttgggtagtgagatttcaccat 26288105  T
Q  131 tggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||| |||||||||| |||||| |||||||    
T  26288104 tggaaggatctaaagcttcctcttgtgtcttctctt 26288069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 26301459 - 26301326
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccat 130  Q
    |||||||| || ||||  |||||||| ||||||||||| |||  |||||||||  ||||||||  |||||||||||||||||||||||||||||||||||    
T  26301459 tacaaaggggggaactctagggttgaatgtctttgtagagagaatctcttgag--ttgggaaaaacattgtaaacaccttgggtagtgagatttcaccat 26301362  T
Q  131 tggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||| |||||||||| |||||| |||||||    
T  26301361 tggaaggatctaaagcttcctcttgtgtcttctctt 26301326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 26313453 - 26313320
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccat 130  Q
    |||||||| || ||||  |||||||| ||||||||||| |||  |||||||||  ||||||||  |||||||||||||||||||||||||||||||||||    
T  26313453 tacaaaggggggaactctagggttgaatgtctttgtagagagaatctcttgag--ttgggaaaaacattgtaaacaccttgggtagtgagatttcaccat 26313356  T
Q  131 tggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||| |||||||||| |||||| |||||||    
T  26313355 tggaaggatctaaagcttcctcttgtgtcttctctt 26313320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 32 - 144
Target Start/End: Original strand, 9054208 - 9054318
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    |||||||  ||||||||| ||| |||||||| ||||||||||| ||||||||  |||||| ||||||| ||| |||||||||||||||||||||||||||    
T  9054208 atacaaataaggtaactttaggattgagtgtttttgtagtgagattctcttg--ggttggaaaacattataatcaccttgggtagtgagatttcaccatt 9054305  T
Q  132 ggaaggatcaaaa 144  Q
    |||||||||||||    
T  9054306 ggaaggatcaaaa 9054318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 19491974 - 19491895
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| |||||||||||  | ||||||||||||||||||||||||||||||||| ||||||| |||||||    
T  19491974 caaaggaggtaactttagggttgagtgcatgtgtagtgaggttctcttgagggttgggaaacatcgtaaacatcttgggt 19491895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 166
Target Start/End: Original strand, 4759858 - 4759992
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttggg---aaacattgtaaacaccttgggtagtga-gatttcacca- 129  Q
    |||||||||||||   |||||||||||||||||||| |||  ||||||  ||||||||   ||||||||||| ||||||||||||||| || ||||  |     
T  4759858 caaaggaggtaaccaaagggttgagtgtctttgtagagagagtctctt--gggttgggaaaaaacattgtaatcaccttgggtagtgaggagttcattag 4759955  T
Q  130 ttggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||||| |||||||||| | |||| |||||||    
T  4759956 ttggaaggatctaaagcttcctctagtgtcttctctt 4759992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 97 - 191
Target Start/End: Original strand, 13204634 - 13204728
Alignment:
Q  97 attgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtga 191  Q
    |||||||||||||||||||||||||||||||| |||| || ||| ||||||||  |||  | ||||||| ||||||||| |||||||||| |||||    
T  13204634 attgtaaacaccttgggtagtgagatttcaccgttgggagaatcaaaaagctttatttaatattttctcataggattca-ttgagagtgtaggtga 13204728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 51 - 166
Target Start/End: Complemental strand, 36979673 - 36979557
Alignment:
Q  51 agggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtga-gatttcacca-ttggaaggatcaaaagctt 148  Q
    |||||||||||||||||||| |||  |||||| ||| | || ||||||||||| ||||||||||||||| || ||||  | ||||||||||| |||||||    
T  36979673 agggttgagtgtctttgtagagagtgtctctt-aggttgggaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatctaaagctt 36979575  T
Q  149 ccttttgtgttttctctt 166  Q
    ||| | |||| |||||||    
T  36979574 cctctagtgtcttctctt 36979557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 4731553 - 4731629
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  4731553 caaaggaggtaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 4731629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 43036318 - 43036394
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  43036318 caaaggaggtaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 43036394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 33037590 - 33037725
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtga-gatttcacca 129  Q
    ||||||||||| |||   ||||||||||||||| |||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||| || ||||  |    
T  33037590 tacaaaggagggaaccaaagggttgagtgtcttcgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcatta 33037687  T
Q  130 -ttggaaggatcaaaagcttccttttgtgttttctctt 166  Q
     ||||||||||| |||||||||| | |||| |||||||    
T  33037688 gttggaaggatctaaagcttcctctagtgtcttctctt 33037725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 51 - 151
Target Start/End: Complemental strand, 6311595 - 6311493
Alignment:
Q  51 agggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtga-gatttcacca-ttggaaggatcaaaagc 146  Q
    |||||||||||||||||| | |||  |||||||  ||||||||||  |||||||| ||||||||||||||| || ||||  | |||||||||||||||||    
T  6311595 agggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattagttggaaggatcaaaagc 6311498  T
Q  147 ttcct 151  Q
    |||||    
T  6311497 ttcct 6311493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 120
Target Start/End: Original strand, 10688923 - 10689009
Alignment:
Q  34 acaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 120  Q
    |||||||||| |||   |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  10688923 acaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 10689009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 166
Target Start/End: Original strand, 18870344 - 18870478
Alignment:
Q  34 acaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtga-gatttcacca- 129  Q
    |||||||||| |||   |||||||||||||||||| | |||  |||||||  ||||||||||  |||||||| ||||||||||||||| || ||||  |     
T  18870344 acaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattag 18870441  T
Q  130 ttggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||||| |||||||||| | |||| |||||||    
T  18870442 ttggaaggatctaaagcttcctctagtgtcttctctt 18870478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 166
Target Start/End: Complemental strand, 30655960 - 30655826
Alignment:
Q  34 acaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtga-gatttcacca- 129  Q
    |||||||||| |||   |||||||||||||||||| | |||  |||||||  ||||||||||  |||||||| ||||||||||||||| || ||||  |     
T  30655960 acaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattag 30655863  T
Q  130 ttggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||||| |||||||||| | |||| |||||||    
T  30655862 ttggaaggatctaaagcttcctctagtgtcttctctt 30655826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 42498089 - 42498163
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 112  Q
    ||||||||||||||| ||||||||| ||||||| | | | ||||||||  |||||||||||| |||||||||||||||    
T  42498089 caaaggaggtaactttagggttgagggtctttg-attaaagttctctt--gggttgggaaacgttgtaaacaccttgg 42498163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 111
Target Start/End: Complemental strand, 3303943 - 3303870
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttg 111  Q
    ||||||||||||||| | ||||||| ||||||| | |  ||||||||||  ||||||||||||||||||||||||||    
T  3303943 caaaggaggtaactttacggttgagggtctttg-attagggttctcttg--ggttgggaaacattgtaaacaccttg 3303870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 5689166 - 5689242
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    |||||||| |||||| ||||||||| ||||||| | |  ||||||||||||  || ||||||||||||||||||||||||    
T  5689166 caaaggagataactttagggttgagggtctttg-attagggttctcttgag--tttggaaacattgtaaacaccttgggt 5689242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 15212681 - 15212757
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    |||| |||||||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  15212681 caaatgaggtaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 15212757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 33352045 - 33352121
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||| ||||||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  33352045 caaagaaggtaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 33352121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 3318823 - 3318745
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaaca-ttgtaaacaccttgggt 114  Q
    |||| |||||||||| ||||||||| |||||||  | |||||||||||  ||||| ||||||| ||| |||||||||||||    
T  3318823 caaatgaggtaactttagggttgagggtctttggtgggaggttctctt--gggttaggaaacatttgaaaacaccttgggt 3318745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 4743429 - 4743400
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  4743429 gggttgggaaacattgtaaacaccttgggt 4743400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 18106304 - 18106275
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  18106304 gggttgggaaacattgtaaacaccttgggt 18106275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 41365073 - 41365044
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  41365073 gggttgggaaacattgtaaacaccttgggt 41365044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 40 - 111
Target Start/End: Original strand, 4162400 - 4162468
Alignment:
Q  40 gaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttg 111  Q
    |||||||||| ||||||||| ||||||| | |  ||||||||||  |||||| |||||||||||||||||||    
T  4162400 gaggtaactttagggttgagggtctttg-attagggttctcttg--ggttggaaaacattgtaaacaccttg 4162468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 143; Significance: 3e-75; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 24334122 - 24333940
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    |||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24334122 atacaaagaaggtaactttagggttgagagtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 24334023  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| |||| ||||||||||||||||||||||||    
T  24334022 ggaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgtgagagtggctgacacaaaatgggtagaaattag 24333940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 16623082 - 16623260
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  16623082 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 16623179  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  16623180 gaaggatcaaaagcttccttttgtgttttcttttaggattcatattgtgagagtgggtgacacaaaatgggtagaaattag 16623260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 35 - 214
Target Start/End: Original strand, 16628663 - 16628841
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 134  Q
    ||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16628663 caaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 16628760  T
Q  135 aggatcaaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattagtg 214  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||| ||| |||||||||||||||||||||||||||||||    
T  16628761 aggatcaaaagcttccttttgtgttttcttttaggattcatattgtgagagtgggtgacacaaaatgggtagaaattagtg 16628841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 6743204 - 6743383
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||||||| |||||||||||||||| |||| |||||||  |||||||||||||||||||||||||||||| ||||||||||||||||    
T  6743204 tacaaaggaggtaacttgaggtttgagtgtctttgtagcgaggatctcttg--ggttgggaaacattgtaaacaccttgggtaatgagatttcaccattg 6743301  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||| ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  6743302 gaaggatcaaaaacttccttttgtgttttctcttaggattcattattgagagtgtgggtgacacaaaatgggtagaaattag 6743383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 5268989 - 5269169
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||| |||||||||||||||||||    
T  5268989 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggatagtgagatttcaccattg 5269086  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||||||||||||    
T  5269087 gaaggatcaaaaagcttccttttgtgttttctcttaggattcattattgagagtgtgggtgacacacaatgggtagaaattag 5269169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 10047689 - 10047509
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||| ||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  10047689 tacaaaggaggtaactttagggttgagtgtctttgtaatgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 10047592  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| |||| |||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  10047591 gaaggatcaaaaaacttccttttgtgttttgtcttaggattcattattgagagtgtgggtgacacaaaatgggtagaaattag 10047509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 3777857 - 3777678
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  3777857 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 3777760  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||| |||| |||||||||||||||| |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  3777759 gaatgatcaaaaagcttccttttgtattttctcttaggattcatattgtgagagtgggtgacacaaaatgggtagaaattag 3777678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 38152227 - 38152406
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||| |||||||||| ||||||||||||||||||||||||| |||||||  || ||||||| ||||||||||||||||||||||| | ||||||||||    
T  38152227 tacaaatgaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggatgggaaatattgtaaacaccttgggtagtgacaattcaccattg 38152324  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||    
T  38152325 gaaggatcaaaagcttccatttgtgttttctcttaggattcattattgagagtgtgggtgacacaaaattggtagaaattag 38152406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 25861822 - 25862000
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||| ||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||| ||||||||||||||||||||    
T  25861822 tacaaagaaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgagtagtgagatttcaccattg 25861919  T
Q  133 gaaggatc-aaaagcttccttttgtg-ttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| |||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  25861920 gaaggatcaaaaaacttccttttgtgtttttctcttaggattca-ttgagagtgtgggtgacacaaaatgggtaggaattag 25862000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 42599364 - 42599540
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||   |||||||||||||| ||||||||||||||||||||||||||||||||    
T  42599364 tacaaaggaggtaactttagg-ttgagtgtctttgtagtgaggttctcttc--ggttgggaaacattctaaacaccttgggtagtgagatttcaccattg 42599460  T
Q  133 gaaggat-caaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||  |||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  42599461 gaaggataaaaaaacttccttttgtgttttctcttaggattca-ttgagagtgcgggtgacacaaaatgggtagaaattag 42599540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 36315019 - 36315197
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||| ||||||||||||| |||| |||||||  |||||||||||||||||||||| |||||||||||||||| |||||||    
T  36315019 tacaaaggaggtaactttagggtttagtgtctttgtagagaggatctcttg--ggttgggaaacattgtaaacacattgggtagtgagatttaaccattg 36315116  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||||||||||||||||||||||| || ||||||||||  |||||||||||||| |||| |||||||||||||||||    
T  36315117 gaaggatcaaaagcttccttttgtgttttttcgtaggattcattattgagagtgtgggtaacac-aaatgggtagaaattag 36315197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 36329228 - 36329406
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||| ||||||||||||| |||| |||||||  |||||||||||||||||||||| |||||||||||||||| |||||||    
T  36329228 tacaaaggaggtaactttagggtttagtgtctttgtagagaggatctcttg--ggttgggaaacattgtaaacacattgggtagtgagatttaaccattg 36329325  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||||||||||||||||||||||| || ||||||||||  |||||||||||||| |||| |||||||||||||||||    
T  36329326 gaaggatcaaaagcttccttttgtgttttttcgtaggattcattattgagagtgtgggtaacac-aaatgggtagaaattag 36329406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 36 - 175
Target Start/End: Original strand, 3793870 - 3794010
Alignment:
Q  36 aaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaa 135  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||    
T  3793870 aaaggaggtaactttagggttgagtgtctttatagtgaggttctcttgagggttggaaaacattgtaaacaccttgggtagtgagatttcaccatagaaa 3793969  T
Q  136 ggatc-aaaagcttccttttgtgttttctcttaggattcat 175  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  3793970 ggatcaaaaagcttccttttgtgtttgctcttaggattcat 3794010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 33 - 176
Target Start/End: Complemental strand, 5112545 - 5112403
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||||||||||| || ||| |||||||||||||| ||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  5112545 tacaaaggaggtaattttaggtttgagtgtctttgttgtgaggttctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 5112448  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatt 176  Q
    |||||||| |||||||||||||| |||||||||||||||||||||    
T  5112447 gaaggatcaaaaagcttccttttatgttttctcttaggattcatt 5112403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 5396460 - 5396639
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||||||||| |||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  5396460 tacaaaggaggttactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 5396557  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc-ttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||| ||||||||||| ||||||||| ||||| ||||| |||||  ||||||| ||| || |||| |||||||||||||||||    
T  5396558 gaagaatcaaaagctttcttttgtgtcttctctttagggttcatcattgagagagtgagtaacac-aaatgggtagaaattag 5396639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 8689285 - 8689463
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||| |||||||||||||||||| |||||||  |||||||||||||| |||||||||||| |||||||||||||||||||    
T  8689285 tacaaaggaggtaactttagggtttagtgtctttgtagtgaggatctcttg--ggttgggaaacattttaaacaccttggatagtgagatttcaccattg 8689382  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||||||| |||||||||||| |||||||||| |||||  ||||||| |||||  |||| |||| ||||||||||||    
T  8689383 gaaggatcaaaagtttccttttgtgtcttctcttagggttcatcattgagagagtgggaaacac-aaattggtagaaattag 8689463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 5143568 - 5143389
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||| |||||||||||| ||||||||||||||||||||||||| |||||||  | ||||||||| ||||||||||||| |||||||||||||||||||||    
T  5143568 tacagaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--gattgggaaactttgtaaacaccttaggtagtgagatttcaccattg 5143471  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc-ttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| ||  ||| |||| |||||||||||| |||||||||||    
T  5143470 gaaggatcataagcttccttttgtgttttctctttagggttcatattctgagagtggctgacacaaaatgagtagaaattag 5143389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 5147986 - 5147807
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||| |||||||||||| |||||| |||||||||||||| ||| |||||||||  |||||||||||||||||||| |||| || ||||||||||||||||    
T  5147986 tacacaggaggtaactttagggtttagtgtctttgtagtaaggatctcttgag--ttgggaaacattgtaaacacattggataatgagatttcaccattg 5147889  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc-ttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||| |||||||||||||||||||||| ||||| ||||| ||| |||  ||||||||||||||||||||||||||||    
T  5147888 gaaggatcataagcttccttttgtgttttctctttagggttcatattgtgagaatgggtgacacaaaatgggtagaaattag 5147807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 39774094 - 39774272
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||||||  | ||||||  ||||||||||||||  ||||||||||||||||||||||||||||||||| |||||||||||    
T  39774094 tacaaaggaggtaactttagggttgagattatttgtaacgaggttctcttgag--ttgggaaacattgtaaacaccttgggtagtgagttttcaccattg 39774191  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca-caaaatgggtagaaattag 212  Q
    ||| |||| |||||||||||||||| ||||||||| ||||||| ||||||||||| ||||||  ||||| ||||||||||||    
T  39774192 gaatgatcaaaaagcttccttttgtattttctcttgggattca-ttgagagtgtgagtgacatgaaaattggtagaaattag 39774272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 31985422 - 31985553
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||| ||||| |||||||||||| |||||| ||||| |||||||  |||||||||||||||||||||||||||||||||| |||||||||| |    
T  31985422 tacaaaggagggaactttagggttgagtgtttttgtattgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgaaatttcaccatgg 31985519  T
Q  133 gaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||||||||||||||||||| |||||||    
T  31985520 gaaggatcaaaagcttccttttgtgtcttctctt 31985553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 54867487 - 54867313
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||  |||||||  |||||| |    ||||||||||  |||||||||||||||||||||||    
T  54867487 tacaaaggaggtaactttagggttgagtgtctttgtagtgagaatctcttg--ggttggaag---ttgtaaacactatgggtagtgagatttcaccattg 54867393  T
Q  133 gaaggatc-aaaagcttcc--ttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| |||||||| |  ||||||||||||||||||||||||||   |||||||| ||||||||||||||||||||||||    
T  54867392 gaaggatcaaaaagctttcttttttgtgttttctcttaggattcatt---gagtgtggatgacacaaaatgggtagaaattag 54867313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 33 - 192
Target Start/End: Original strand, 1983089 - 1983247
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgaga-tttcaccatt 131  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||| ||||  |||||| | ||||||||||||||| ||| |||| ||| ||||||||||    
T  1983089 tacaaagaaggtaactttagggttgagtgtctttgtagtgaggttatctt--gggttgtgtaacattgtaaacaccctggttagtaagattttcaccatt 1983186  T
Q  132 ggaaggat-caaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgac 192  Q
    ||||||||  ||||||||||||||| |||||||||||||||||| |||||||||| ||||||    
T  1983187 ggaaggataaaaaagcttccttttgggttttctcttaggattca-ttgagagtgtaggtgac 1983247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 55 - 212
Target Start/End: Complemental strand, 18377645 - 18377489
Alignment:
Q  55 ttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttt 153  Q
    |||||||| ||||||||||||||||||||  || ||| ||||||||||||| ||||||||| |||||||| ||||||||||||||| ||||||||| |||    
T  18377645 ttgagtgtatttgtagtgaggttctcttg--ggatggaaaacattgtaaaccccttgggtaatgagattttaccattggaaggatcaaaaagcttcattt 18377548  T
Q  154 tgtgttttctcttaggattcatttgagagtgtgggtgaca-caaaatgggtagaaattag 212  Q
    |||||||| |||||||||||| |||  |||||||||||||  ||||||||||||||||||    
T  18377547 tgtgttttttcttaggattca-ttgtaagtgtgggtgacatgaaaatgggtagaaattag 18377489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 28468323 - 28468456
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacat--tgtaaacaccttgggtagtgagatttcaccat 130  Q
    ||||||||||| ||||  |||||| |||||||||||||||||| |||||||  |||||||||| ||  ||||||||||||||||||||||||||||||||    
T  28468323 tacaaaggagggaactctagggttaagtgtctttgtagtgaggatctcttg--ggttgggaaaaatattgtaaacaccttgggtagtgagatttcaccat 28468420  T
Q  131 tggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||| |||||||||| |||||| |||||||    
T  28468421 tggaaggatctaaagcttcctcttgtgtcttctctt 28468456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 48893921 - 48893839
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  48893921 atacaaaggaggtaatttgagggttgagtgtctttgtagtgaggttctctttagggtttggaaacattgtaaacaccttgggt 48893839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 6542458 - 6542378
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||    
T  6542458 atacaaaggaggtaactttagggttgagtgtctttgtaatgaggttctctt--gggttgggaaacattgtaaacaccttgggt 6542378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 51336955 - 51337035
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    |||||||||| ||||||| |||||||| |||||||||||||||||||||||  ||||||| ||||||||||||||||||||||    
T  51336955 atacaaaggaagtaactttagggttgaatgtctttgtagtgaggttctctt--gggttggaaaacattgtaaacaccttgggt 51337035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 35 - 211
Target Start/End: Complemental strand, 37782170 - 37781992
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacatt-gtaaacaccttgggtagtgagatttcaccattgg 133  Q
    |||| |||||||||| || ||||| | ||||||  | |||| |||||||  |||||| ||||||| |||||||||||||||||||||||||||  |||||    
T  37782170 caaatgaggtaactttagagttgaatatctttggtgagaggctctcttg--ggttggaaaacatttgtaaacaccttgggtagtgagatttcattattgg 37782073  T
Q  134 aaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgac--acaaaatgggtagaaatta 211  Q
    ||| ||| |||||  || ||| ||||||||||||| |||||||||  |||||| ||||||    |||||||||||||||||    
T  37782072 aagaatcaaaaagtctcttttagtgttttctcttaagattcatttacgagtgtaggtgacttgaaaaatgggtagaaatta 37781992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 4587848 - 4587929
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtcttt-gtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||| ||| |||||| |||||| ||||||||| |||||||||||||| ||  |||||||||||||||||||||||||||||    
T  4587848 atacaaatgagataactttagggttaagtgtcttttgtagtgaggttctcatg--ggttgggaaacattgtaaacaccttgggt 4587929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 33 - 175
Target Start/End: Complemental strand, 29760956 - 29760811
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa---cattgtaaacaccttgggtagtga-gatttcacc 128  Q
    ||||||||||| |||   |||||||||||||||||||| |||  |||||||  ||||||||||   |||||||| ||||||||||||||| || ||||      
T  29760956 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaaacattgtaatcaccttgggtagtgaggagttcatt 29760859  T
Q  129 a-ttggaaggatcaaaagcttccttttgtgttttctcttaggattcat 175  Q
    | ||||||||||| |||||||||| | |||| |||||||||| |||||    
T  29760858 agttggaaggatctaaagcttcctctagtgtcttctcttagggttcat 29760811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 24742255 - 24742120
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtga-gatttcacca 129  Q
    ||||||||||| |||   |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||| || ||||  |    
T  24742255 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcatta 24742158  T
Q  130 -ttggaaggatcaaaagcttccttttgtgttttctctt 166  Q
     ||||||||||| |||||||||| | |||| |||||||    
T  24742157 gttggaaggatctaaagcttcctctagtgtcttctctt 24742120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 35 - 112
Target Start/End: Complemental strand, 9927730 - 9927656
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgg 112  Q
    ||||||||||||||| ||||||||| ||||||| | | | |||||||||  |||||||||||||||||||||||||||    
T  9927730 caaaggaggtaactttagggttgagggtctttg-attaaagttctcttg--ggttgggaaacattgtaaacaccttgg 9927656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 48142937 - 48143013
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  48142937 caaaggaggtaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 48143013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 52082930 - 52082854
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  52082930 caaaggaggtaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 52082854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 112
Target Start/End: Original strand, 6677362 - 6677438
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaaca-ttgtaaacaccttgg 112  Q
    ||||||||||||||| ||||||||||||||||||   | |||||||||  ||||||||||||| |||||||||| ||||    
T  6677362 caaaggaggtaactttagggttgagtgtctttgttcaggggttctctt--gggttgggaaacatttgtaaacacattgg 6677438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 873356 - 873440
Alignment:
Q  85 gggttgggaaacatt-gtaaacaccttgggtagtgagatttcaccattggaaggatcaaaa-gcttccttttgtgttttctctta 167  Q
    |||||||| |||||| |||||||||||| |||||||||| |||  |  || |||||||||| ||||| |||||||||||||||||    
T  873356 gggttggggaacatttgtaaacaccttgagtagtgagatctcattagagggaggatcaaaaagcttcattttgtgttttctctta 873440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 5429574 - 5429650
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||| ||||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  5429574 caaaggaagtaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 5429650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 26175909 - 26175833
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| || |||||| ||||||| | | | ||||| |||  |||||||||||||||||||||||||||||    
T  26175909 caaaggaggtaactttagagttgagggtctttg-attaaagttctgttg--ggttgggaaacattgtaaacaccttgggt 26175833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 52095635 - 52095559
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| | |||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  52095635 caaaggaggtaactttagggttgagggactttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 52095559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 212
Target Start/End: Original strand, 3796455 - 3796486
Alignment:
Q  181 agtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||||||||||||||||||||||||||    
T  3796455 agtgtgggtgacacaaaatgggtagaaattag 3796486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 98 - 176
Target Start/End: Original strand, 34670517 - 34670596
Alignment:
Q  98 ttgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcatt 176  Q
    |||||| || ||||||||||||||| |||  |  ||||||||| ||||| || |||| ||||||||||||||||||||||    
T  34670517 ttgtaagcatcttgggtagtgagatctcattagaggaaggatctaaaagttttctttagtgttttctcttaggattcatt 34670596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 72 - 114
Target Start/End: Complemental strand, 36463626 - 36463586
Alignment:
Q  72 gaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||  |||||||||||||||||||||||||||    
T  36463626 gaggttctcttgag--ttgggaaacattgtaaacaccttgggt 36463586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 5871762 - 5871791
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  5871762 gggttgggaaacattgtaaacaccttgggt 5871791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 13009657 - 13009628
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  13009657 gggttgggaaacattgtaaacaccttgggt 13009628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 45687409 - 45687380
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  45687409 gggttgggaaacattgtaaacaccttgggt 45687380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 52467628 - 52467551
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaaca-ttgtaaacaccttgggt 114  Q
    |||||||||||| || ||||||||| ||||||| | |  |||||||||  ||||||||||||| |||||||||||||||||    
T  52467628 caaaggaggtaattttagggttgagggtctttg-attagggttctctt--gggttgggaaacatttgtaaacaccttgggt 52467551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 29254389 - 29254465
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    |||||||| |||||| ||||||||  ||||||| |||   |||||||||  |||||||||||||||||||||| ||||||    
T  29254389 caaaggagataactttagggttgaaggtctttg-agtagagttctcttg--ggttgggaaacattgtaaacacattgggt 29254465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 136; Significance: 4e-71; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 136; E-Value: 4e-71
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 29160116 - 29159933
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29160116 atacaaaggaggtaacttttgggttgagtgtctttatagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaacatt 29160017  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcat-ttgagagtgtgggtgacac-aaaatgggtagaaattag 212  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| ||||||||||||||||||    
T  29160016 ggaaggatcaaaaagcttccttttgtgttttctcttaggattcatattgtgagagtgggtgacacaaaaatgggtagaaattag 29159933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 2647486 - 2647663
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||||||||| |||||| ||||||||||||||||||||||||| |||||||  ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  2647486 tacaaaggagataactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacatggtaagcaccttgggtagtgagatttcaccattg 2647583  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||| |||| |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2647584 gaaggatcaaaaaacttcattttgtgttttctcttaggattca-ttgagagtgtgggtgacacaaaatgggtagaaattag 2647663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 36 - 191
Target Start/End: Complemental strand, 20284394 - 20284241
Alignment:
Q  36 aaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaa 135  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20284394 aaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaa 20284297  T
Q  136 ggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtga 191  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20284296 ggatcaaaaagcttccttttgtgttttctcttaggattca-ttgagagtgtgggtga 20284241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 33 - 191
Target Start/End: Original strand, 23402802 - 23402958
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  23402802 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 23402899  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtga 191  Q
    ||| |||| |||||||||||||||||||||||||||||||||| ||||||||||| ||||    
T  23402900 gaatgatcaaaaagcttccttttgtgttttctcttaggattca-ttgagagtgtgagtga 23402958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 33 - 211
Target Start/End: Original strand, 46516094 - 46516276
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  46516094 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttgag--ttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 46516191  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatt-----tgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    |||||||| ||||||||| ||||||||||||||||| ||||||||      | | ||||||||||||||||||||||||||||||    
T  46516192 gaaggatcaaaaagcttcattttgtgttttctcttaagattcattggtggagtgtgtgtgggtgacacaaaatgggtagaaatta 46516276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 33 - 209
Target Start/End: Original strand, 4796458 - 4796631
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||| ||||||||||||||||||||| |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  4796458 tacaaaggaggtaactttagg-ttgagtgtctttgtagtgaggatctcttg--ggttggaaaacattgtaaacaccttgggtagtgagatttcaccattg 4796554  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaat 209  Q
    |||||||| ||||||||| |||||||||||||||||||||||| |||||| ||| |||||||||||||||||| ||||    
T  4796555 gaaggatcaaaaagcttctttttgtgttttctcttaggattca-ttgagaatgtaggtgacacaaaatgggtataaat 4796631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 9184965 - 9185142
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 134  Q
    ||||||||||||||| |||||||||| |||||||||| |||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  9184965 caaaggaggtaactttagggttgagtatctttgtagtaaggttctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 9185062  T
Q  135 aggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca--caaaatgggtagaaattag 212  Q
    |||||| |||||||||||| ||||||||||||||||||||| || ||||||||||||| |   ||||||||||||||||||    
T  9185063 aggatcaaaaagcttccttgtgtgttttctcttaggattca-ttaagagtgtgggtgatatgaaaaatgggtagaaattag 9185142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 35 - 191
Target Start/End: Complemental strand, 2580695 - 2580542
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgga 134  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||||  |||||| |||||||||||||||||||||||||||||||||||||||| |    
T  2580695 caaaggaggtaactttagggttgagtgtctttgt-gtgaggttctcttg--ggttggaaaacattgtaaacaccttgggtagtgagatttcaccattgaa 2580599  T
Q  135 aggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtga 191  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  2580598 aggatcaaaaagcttccttttgtgttttctcttaggattca-ttgagagtgtgggtga 2580542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 35 - 212
Target Start/End: Original strand, 9189797 - 9189975
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgt-ctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgg 133  Q
    |||||||| |||||| |||||||||||| ||||||||| |||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9189797 caaaggagataactttagggttgagtgttctttgtagtaaggttctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattgg 9189894  T
Q  134 aaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca--caaaatgggtagaaattag 212  Q
    ||||||| |||||||||||| ||||||||||||||||||||| || ||||||||||||| |   ||||||||||||||||||    
T  9189895 aaggatcaaaaagcttccttgtgtgttttctcttaggattca-ttaagagtgtgggtgatatgaaaaatgggtagaaattag 9189975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 3047562 - 3047384
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||  ||||||||||||| | ||| || ||||||||||||||||||| |||||    
T  3047562 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggttctctt--gggttgggaaacactataatcatcttgggtagtgagatttcatcattg 3047465  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgac-acaaaatgggtagaaattag 212  Q
    |||||||| ||||||||||||||||||||| ||||| |||||| |||||||||||||||||   ||||||||||||||||||    
T  3047464 gaaggatcaaaaagcttccttttgtgttttatcttaagattca-ttgagagtgtgggtgacttaaaaatgggtagaaattag 3047384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 33332239 - 33332417
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| |||||||||||| |||||||| |||||||||||  ||||| ||||||||||||||| |||||||||||||||||||||||||    
T  33332239 tacaaaggaggtaactttagggttgagtgtttttgtagtaaggttctcttg--ggttgagaaacattgtaaacatcttgggtagtgagatttcaccattg 33332336  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacac-aaaatgggtagaaattag 212  Q
    |||||||| |||||||||| ||||||||||||||||||| ||| ||||||||||| |||| || |||||| |||||||||||    
T  33332337 gaaggatcaaaaagcttccctttgtgttttctcttaggaatca-ttgagagtgtgcgtgatacaaaaatgagtagaaattag 33332417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 32 - 192
Target Start/End: Original strand, 5817058 - 5817216
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||| ||   ||||||||||||||||||| |||||||| |||||||||||||||||    
T  5817058 atacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctattt--ggttgggaaacattgtaaataccttggggagtgagatttcaccatt 5817155  T
Q  132 ggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgac 192  Q
    ||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||| |||||    
T  5817156 ggaaggatcaaaaagcttccttttgtgttttttcttaggattca-ttgagagtgtgagtgac 5817216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 33 - 208
Target Start/End: Complemental strand, 21989216 - 21989041
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||| ||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||    
T  21989216 tacaaaggaggtaactttaggtttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagattttaccattg 21989119  T
Q  133 gaaggatcaaaagcttccttttgtgttttctctt-aggattcat-ttgagagtgtgggtgacacaaaatgggtagaaa 208  Q
    ||||||||| |||||||||||  ||||||||||| ||| ||||| ||   || |||||||||||||||||||||||||    
T  21989118 gaaggatcataagcttcctttattgttttctctttagggttcatatttttagagtgggtgacacaaaatgggtagaaa 21989041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 85 - 212
Target Start/End: Complemental strand, 49091921 - 49091791
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgaga 181  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||  | ||||    
T  49091921 gggttgggaaacattgaaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttccttttgtgttttctcttaggattcattatggaga 49091822  T
Q  182 gtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||| ||||||||||||||||    
T  49091821 gtgtgggtgacacagaatgggtagaaattag 49091791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 2479644 - 2479465
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||| ||||| |||||||||||||||| |||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  2479644 tacaaaggagggaactttagggttgagtgtctttatagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 2479547  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc-ttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||| | | ||||| ||||| |||||  ||||||| |||||  |||| | |||||||||||||||    
T  2479546 gaaggatcaaaagcttccttttatatcttctctttagggttcattattgagagagtgggaaacac-acatgggtagaaattag 2479465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 97 - 212
Target Start/End: Complemental strand, 56195 - 56077
Alignment:
Q  97 attgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgaca 193  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||  ||||||||||||||||||    
T  56195 attgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaaagcttctttttgtgttttctcttaggattcattattgagagtgtgggtgaca 56096  T
Q  194 caaaatgggtagaaattag 212  Q
    |||||||||||||||||||    
T  56095 caaaatgggtagaaattag 56077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 36 - 212
Target Start/End: Complemental strand, 47263971 - 47263795
Alignment:
Q  36 aaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaa 135  Q
    |||||||||||||| ||||||||||||||||||||||||  ||||||   ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  47263971 aaaggaggtaactttagggttgagtgtctttgtagtgagaatctcttc--ggttgggaaacattgtaaataccttgggtagtgagatttcaccattggaa 47263874  T
Q  136 ggatcaaaagcttccttttgtgttttct-cttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||||||||||||||||| ||||  ||||| |||||  ||||||| |||||  |||| |||||| ||||||||||    
T  47263873 ggatcaaaagcttccttttgtgtcttctatttagggttcattattgagagagtgggaaacac-aaatggatagaaattag 47263795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 84 - 208
Target Start/End: Complemental strand, 21983545 - 21983419
Alignment:
Q  84 agggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttctc-ttaggattcat-ttgaga 181  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||  ||    
T  21983545 agggtggggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatcataagcttccttttgtgttttctctttagggttcatattttga 21983446  T
Q  182 gtgtgggtgacacaaaatgggtagaaa 208  Q
    | |||||||||||||||||||||||||    
T  21983445 gagtgggtgacacaaaatgggtagaaa 21983419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 60 - 212
Target Start/End: Original strand, 9235398 - 9235550
Alignment:
Q  60 tgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgt 158  Q
    |||||| |||||||| ||||||||  ||||||||||||||||||||||||||| |||||| |||||||||||| ||||||| ||||||||||||||||||    
T  9235398 tgtcttcgtagtgagattctcttg--ggttgggaaacattgtaaacaccttggatagtgatatttcaccattgcaaggatcaaaaagcttccttttgtgt 9235495  T
Q  159 tttctcttaggattcatttgagagtgtgggtgaca--caaaatgggtagaaattag 212  Q
    |||||||||||||||  ||||||||| |||||| |   ||||||||||||||||||    
T  9235496 tttctcttaggattc-gttgagagtgcgggtgatatgaaaaatgggtagaaattag 9235550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 85 - 212
Target Start/End: Complemental strand, 35961075 - 35960946
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc-aaaagcttccttttgtgttttctcttaggattcatttgagagt 183  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||||| |  ||||    
T  35961075 gggttgggaaacattgtaaacaccttaggtagtgagatttcaccattggaaggatcaaaaagcttccttttgcgttttctcttaagattcatctttgagt 35960976  T
Q  184 gtgggtgaca-caaaatgggtagaaattag 212  Q
    |||||||| |  ||||||||||||||||||    
T  35960975 gtgggtgatatgaaaatgggtagaaattag 35960946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 21640120 - 21639987
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccat 130  Q
    ||||||||||| ||||  |||||||||||||||||||| |||| |||||||  ||||||||||  |||||||||||||||||||||||||||||||||||    
T  21640120 tacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttg--ggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccat 21640023  T
Q  131 tggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||| |||||||||| | |||| |||||||    
T  21640022 tggaaggatctaaagcttcctctagtgtcttctctt 21639987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 36 - 136
Target Start/End: Original strand, 44847917 - 44848015
Alignment:
Q  36 aaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaa 135  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  44847917 aaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttggatagtgagatttcaccattggaa 44848014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 18413950 - 18413825
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccat 130  Q
    ||||||||||| ||||  ||||||||||||||||||||||||| |||||||  ||||||||||  || ||||||||||||||||||||||||||||||||    
T  18413950 tacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaaaacaatgtaaacaccttgggtagtgagatttcaccat 18413853  T
Q  131 tggaaggatcaaaagcttccttttgtgt 158  Q
    ||||||||||  ||||||||| ||||||    
T  18413852 tggaaggatcttaagcttcctcttgtgt 18413825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 21646318 - 21646185
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccat 130  Q
    ||||||||||| ||||  |||||||||||||||||||| |||| |||||||  ||||||||||  |||||||||||||||||||||||||||||||||||    
T  21646318 tacaaaggaggaaactctagggttgagtgtctttgtagagaggatctcttg--ggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccat 21646221  T
Q  131 tggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||| ||| |||||| | |||| |||||||    
T  21646220 tggaaggatctaaatcttcctctagtgtcttctctt 21646185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 33 - 158
Target Start/End: Complemental strand, 18409074 - 18408949
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccat 130  Q
    ||||||||||| ||||  ||||||||||||||||||||||||| |||||||  ||||||||||  |||||||||||||||||||||||||||||||||||    
T  18409074 tacaaaggagggaactctagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaaaacattgtaaacaccttgggtagtgagatttcaccat 18408977  T
Q  131 tggaaggatcaaaagcttccttttgtgt 158  Q
    |  |||||||  ||||||||| ||||||    
T  18408976 taaaaggatcttaagcttcctcttgtgt 18408949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 1533226 - 1533360
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag-atttcacca 129  Q
    ||||||||||| |||   |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| |||||||||||||||| | |||||||    
T  1533226 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcacca 1533323  T
Q  130 ttggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||||| |||||||||| | |||| |||||||    
T  1533324 ttggaaggatctaaagcttcctctagtgtcttctctt 1533360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 33 - 114
Target Start/End: Complemental strand, 49091997 - 49091918
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||| | ||||||||||||||||| ||||| | ||||  |||||||||||||||| |||||||||||||    
T  49091997 tacaaaggaggtaactttaaggttgagtgtctttgtactgaggatatctt--gggttgggaaacattgaaaacaccttgggt 49091918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 43864139 - 43864215
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| ||||||| | | | |||||||||  |||||||||||||||||||||||||||||    
T  43864139 caaaggaggtaactttagggttgagggtctttg-attaaagttctcttg--ggttgggaaacattgtaaacaccttgggt 43864215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 38671495 - 38671419
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  38671495 caaaggaggtaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 38671419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 2058283 - 2058196
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgag 120  Q
    ||||||||||| |||   |||||||||||||||||||| |||  |||||||  ||||||||||  |||||||| ||||||||||||||||    
T  2058283 tacaaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgag 2058196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 44848567 - 44848652
Alignment:
Q  129 attggaaggatcaaaagcttccttttgtgttttctc-ttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||||||| ||||| ||||  |||||  ||||||| |||||  |||| |||||||||||||||||    
T  44848567 attggaaggatcaaaagcttccttttgtgtcttctctttagagttcattattgagagagtgggaaacac-aaatgggtagaaattag 44848652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 34 - 166
Target Start/End: Original strand, 20357330 - 20357464
Alignment:
Q  34 acaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtga-gatttcacca- 129  Q
    |||||||||| |||   |||||||||||||||||| | |||  |||||||  ||||||||||  |||||||| ||||||||||||||| || ||||  |     
T  20357330 acaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgaggagttcattag 20357427  T
Q  130 ttggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||||| |||||||||| | |||| |||||||    
T  20357428 ttggaaggatctaaagcttcctctagtgtcttctctt 20357464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 110
Target Start/End: Original strand, 6570489 - 6570561
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacacctt 110  Q
    ||||||||||||||| ||| ||||||||||||| | |  |||||||||  ||| ||||||||||||||||||||||    
T  6570489 caaaggaggtaactttaggattgagtgtctttg-actagggttctctt--ggggtgggaaacattgtaaacacctt 6570561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 24526170 - 24526094
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    |||||||| |||||| ||||||||| ||||||| | |  |||||||||   |||||||||||||||||||||||||||||    
T  24526170 caaaggagataactttagggttgagggtctttg-attatggttctctta--ggttgggaaacattgtaaacaccttgggt 24526094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 47676409 - 47676333
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    |||||||| |||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  47676409 caaaggagataactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 47676333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 48489326 - 48489402
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||| ||||||||  |||||||    ||| ||||||||  |||||||||||||||||||||||||||||    
T  48489326 caaaggaggtaactttagggttgatggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttgggt 48489402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 19502073 - 19502156
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgaga 121  Q
    |||| |||||||||| ||||||||| |||||||    ||| ||||||||  |||||||||||||||||||||||||||  |||||||    
T  19502073 caaatgaggtaactttagggttgagggtctttgattagag-ttctcttg--ggttgggaaacattgtaaacaccttggtgagtgaga 19502156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Complemental strand, 79696 - 79654
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgagg 75  Q
    ||||||||||||||||| | | |||||||||||||||||||||    
T  79696 tacaaaggaggtaactttaagattgagtgtctttgtagtgagg 79654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 115
Target Start/End: Complemental strand, 41649236 - 41649206
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggta 115  Q
    |||||||||||||||||||||||||||||||    
T  41649236 gggttgggaaacattgtaaacaccttgggta 41649206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Original strand, 4586103 - 4586132
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  4586103 gggttgggaaacattgtaaacaccttgggt 4586132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 114
Target Start/End: Complemental strand, 31733195 - 31733166
Alignment:
Q  85 gggttgggaaacattgtaaacaccttgggt 114  Q
    ||||||||||||||||||||||||||||||    
T  31733195 gggttgggaaacattgtaaacaccttgggt 31733166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 67
Target Start/End: Original strand, 40808485 - 40808517
Alignment:
Q  35 caaaggaggtaacttgagggttgagtgtctttg 67  Q
    ||||||||||||||| |||||||||||||||||    
T  40808485 caaaggaggtaactttagggttgagtgtctttg 40808517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 132; Significance: 1e-68; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 5993 - 5814
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| | ||||||||||||||||||||||| |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  5993 tacaaaggaggtaactttatggttgagtgtctttgtagtgaggatctcttg--ggttggcaaacattgtaaacaccttgggtagtgagatttcaccattg 5896  T
Q  133 gaaggatc-aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaatta 211  Q
    |||||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||    
T  5895 gaaggatcaaaaagcttccttttgtgttttctcttaggattcatcattgagagtgtgggtgacacaaaatgagtagaaatta 5814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 41 - 213
Target Start/End: Complemental strand, 2794 - 2621
Alignment:
Q  41 aggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattggaaggatc 140  Q
    ||||||||| |||||| ||| |||||||||||||| |||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  2794 aggtaactttagggttaagtttctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgcgtagtgagatttcaccattggaaggatc 2697  T
Q  141 -aaaagcttccttttgtgttttctcttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattagt 213  Q
     ||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  2696 aaaaagcttccttttgtgttttatcttaggattcatcattgagagtgtgggtgacacaaaatgggtagaaattagt 2621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 33 - 212
Target Start/End: Original strand, 133068 - 133247
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||| ||||| |||||||||| |||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  133068 tacaaaggagggaactttagggttgagtttctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 133165  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc-ttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||  ||||||| |||||  |||| |||||||||||||||||    
T  133166 gaaggatcaaaagcttccttttgtgtcttctctttagggttcattattgagagagtgggaaacac-aaatgggtagaaattag 133247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 32 - 212
Target Start/End: Complemental strand, 11042 - 10859
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11042 atacaaaggaggtaactttatggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 10943  T
Q  132 ggaaggatc-aaaagcttc-cttttgtgttttctcttaggattcatttga-gagtgtgggtgacacaaaatgggtagaaattag 212  Q
    ||||||||| |||||||||  |||| |||||||||||||||||||| | | ||| |||||||||||||||| | ||||||||||    
T  10942 ggaaggatcaaaaagcttcttttttctgttttctcttaggattcatatcatgagagtgggtgacacaaaatagatagaaattag 10859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 85991 - 85812
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||| ||||||||||||||||||||||||    
T  85991 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacactttgggtagtgagatttcaccattg 85894  T
Q  133 gaaggatcaaaagcttccttttgtg-ttttctcttaggattcat-ttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
    |||||||||||| |||||||||||| ||||||||||| |||||| ||| | | ||||| |||||||||||||||||||||||    
T  85893 gaaggatcaaaaacttccttttgtgtttttctcttagaattcatattgtgggagtgggagacacaaaatgggtagaaattag 85812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 33 - 209
Target Start/End: Original strand, 36621 - 36797
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| |||||||  |||||| ||||||||||||||||||||||||||||||||||||||||    
T  36621 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatctcttg--ggttggaaaacattgtaaacaccttgggtagtgagatttcaccattg 36718  T
Q  133 gaaggatcaaaagcttccttttgtgttttctc-ttaggattcat--ttgagagtgtgggtgacacaaaatgggtagaaat 209  Q
    |||||||||||||||||||||||||| ||||| ||||| |||||  ||||||| |||||  |||| ||||||||||||||    
T  36719 gaaggatcaaaagcttccttttgtgtcttctctttagggttcattattgagagagtgggaaacac-aaatgggtagaaat 36797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 43750 - 43881
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||| |||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  43750 tacaaaggaggtaactttagggttgagtgtctttgtagtgaggatcttttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 43847  T
Q  133 gaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||||||||||||||||||| |||||||    
T  43848 gaaggatcaaaagcttccttttgtgtcttctctt 43881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 8206 - 8337
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  8206 tacaaaggagggaactttagggttgagtgtctttgtagtgaggatctcttg--ggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 8303  T
Q  133 gaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||| |||||||||||||||||| |||||||    
T  8304 gaaggattaaaagcttccttttgtgtcttctctt 8337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 96; Significance: 3e-47; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 33 - 166
Target Start/End: Complemental strand, 45507 - 45375
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtcttt-gtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccatt 131  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||| |||||||  ||||| ||||||||||||||||||||||||||||||||||||||||    
T  45507 tacaaaggaggtaactttagggttgaatgtcttttgtagtgaggatctcttg--ggttgtgaaacattgtaaacaccttgggtagtgagatttcaccatt 45410  T
Q  132 ggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    ||||||||||||||||||||||||||| |||||||    
T  45409 ggaaggatcaaaagcttccttttgtgtcttctctt 45375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 17559 - 17393
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    |||| |||||||||||| | ||||||||||||||||||||  | |||||||  | |||||||||||||||||||||||||||||||||||||||||        
T  17559 tacataggaggtaactttacggttgagtgtctttgtagtggagatctcttg--gattgggaaacattgtaaacaccttgggtagtgagatttcacc---- 17466  T
Q  133 gaaggatcaaaagcttccttttgtgttttctcttaggattcatttgagagtgtgggtgacacaaaatgggtagaaattag 212  Q
          |||||| ||||||||||||||||||||||||||||| || |||||||| |||||||||||| ||||||||||||    
T  17465 ------tcaaaaacttccttttgtgttttctcttaggattca-ttaagagtgtgagtgacacaaaataggtagaaattag 17393  T

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Target: scaffold0188 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 17737 - 17870
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccat 130  Q
    ||||||||||| ||||  |||||||||||||||||||| |||| |||||||  ||||||||||  |||||||| ||||||||||||||||||||||||||    
T  17737 tacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgagatttcaccat 17834  T
Q  131 tggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||| |||||||||| |||||| |||||||    
T  17835 tggaaggatctaaagcttcctcttgtgtcttctctt 17870  T

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Target: scaffold0188; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 33 - 166
Target Start/End: Original strand, 23830 - 23963
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaa--cattgtaaacaccttgggtagtgagatttcaccat 130  Q
    ||||||||||| ||||  |||||||||||||||||||| |||| |||||||  ||||||||||  |||||||| ||||||||||||||||||||||||||    
T  23830 tacaaaggagggaactctagggttgagtgtctttgtagagaggatctcttg--ggttgggaaaaacattgtaatcaccttgggtagtgagatttcaccat 23927  T
Q  131 tggaaggatcaaaagcttccttttgtgttttctctt 166  Q
    |||||||||| |||||||||| |||||| |||||||    
T  23928 tggaaggatctaaagcttcctcttgtgtcttctctt 23963  T

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Target: scaffold0078 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 33 - 212
Target Start/End: Complemental strand, 23840 - 23661
Alignment:
Q  33 tacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctcttgagggttgggaaacattgtaaacaccttgggtagtgagatttcaccattg 132  Q
    ||||| ||||||||||| | ||||||| |||||| |||||||||||| |||  |||||| ||| ||||||| |||||||||||||||||| ||||||||     
T  23840 tacaatggaggtaactttaaggttgagcgtctttatagtgaggttctattg--ggttggaaaaaattgtaatcaccttgggtagtgagatgtcaccatta 23743  T
Q  133 gaaggatcaaaa--gcttccttttgtgttttctcttaggattcatttgagagtgtgggtgaca-caaaatgggtagaaattag 212  Q
    ||||||| ||||  || || |||||||||||||||||||||||| ||| |||||||  |||||  ||||||||||||||||||    
T  23742 gaaggataaaaaaggcatcattttgtgttttctcttaggattca-ttgtgagtgtgtctgacatgaaaatgggtagaaattag 23661  T

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Target: scaffold0477 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 32 - 82
Target Start/End: Original strand, 5744 - 5794
Alignment:
Q  32 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctctt 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5744 atacaaaggaggtaacttgagggttgagtgtctttgtagtgaggttctctt 5794  T

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Target: scaffold0002 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 192
Target Start/End: Complemental strand, 14941 - 14833
Alignment:
Q  85 gggttgggaaacatt-gtaaacaccttgggtagtgagatttcaccattggaaggatcaaaagcttccttttgtgttttctcttaggattca-tttgagag 182  Q
    ||||||||||||||| ||||| ||||| ||| ||||||||| |  |||||||| ||||||| || ||||| |||||||||||||||||||| |||| |||    
T  14941 gggttgggaaacatttgtaaatacctttggtggtgagattttattattggaagcatcaaaaact-cctttagtgttttctcttaggattcactttgtgag 14843  T
Q  183 tgtgggtgac 192  Q
    ||||||||||    
T  14842 tgtgggtgac 14833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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