View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20578_low_43 (Length: 317)

Name: NF20578_low_43
Description: NF20578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20578_low_43
NF20578_low_43
[»] chr4 (12 HSPs)
chr4 (30-298)||(31150867-31151135)
chr4 (39-295)||(31162145-31162402)
chr4 (30-206)||(31529116-31529292)
chr4 (30-295)||(31488921-31489186)
chr4 (30-262)||(31159801-31160033)
chr4 (43-262)||(31030280-31030499)
chr4 (43-262)||(31020399-31020618)
chr4 (158-295)||(31496404-31496541)
chr4 (42-295)||(31501458-31501711)
chr4 (38-252)||(31482180-31482397)
chr4 (30-127)||(31476336-31476433)
chr4 (39-104)||(31496285-31496350)
[»] chr6 (9 HSPs)
chr6 (46-202)||(12781337-12781493)
chr6 (46-127)||(12785602-12785683)
chr6 (47-124)||(12782166-12782243)
chr6 (227-295)||(33306981-33307049)
chr6 (156-263)||(33060082-33060189)
chr6 (240-295)||(33642147-33642202)
chr6 (156-205)||(33361083-33361132)
chr6 (158-267)||(33390596-33390705)
chr6 (32-104)||(33307172-33307244)
[»] chr2 (1 HSPs)
chr2 (156-263)||(17438135-17438242)


Alignment Details
Target: chr4 (Bit Score: 269; Significance: 1e-150; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 30 - 298
Target Start/End: Complemental strand, 31151135 - 31150867
Alignment:
Q  30 gcacctgaactccttcgagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctcagtttggtgtttgcgagaattggagt 129  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31151135 gcacctgaactccttcgagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctcagtttggtgtttgcgagaattggagt 31151036  T
Q  130 gcatacttcaaagctttcaactatctggaaaacgtgttctgcctgtgttctatgatgttgatccatcagaggtgcgatatcaaaaaggatgttatgctga 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31151035 gcatacttcaaagctttcaactatctggaaaacgtgttctgcctgtgttctatgatgttgatccatcagaggtgcgatatcaaaaaggatgttatgctga 31150936  T
Q  230 agccttagctaaacatgaagaaagattccaacaaaactttgaaattgtgcaaagatggagggaagcact 298  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31150935 agccttagctaaacatgaagaaagattccaacaaaactttgaaattgtgcaaagatggagggaagcact 31150867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 39 - 295
Target Start/End: Complemental strand, 31162402 - 31162145
Alignment:
Q  39 ctccttcgagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctcagtt--tggtgtttgcgagaattggagtgcatact 136  Q
    |||||| ||||||| || ||||||| ||||||  ||||||| || |||||||||||||||||||||  |  ||||| |||| |||||| || | ||| ||    
T  31162402 ctccttggagcaatcga-gactctctgattttcattgtggtattttctaagaactatgcttcctcaactattggtgcttgcaagaattagaatccatcct 31162304  T
Q  137 tcaaagctttcaactatctggaaaacgtgttctgcctgtgttctatgatgttgatccatcagaggtgcgatatcaaaaaggatgttatgctgaagcctta 236  Q
    |||  || || || | || | ||  | |||||||||||| ||||||||||||||||| |  ||| || ||||||||||||||  ||||| |||||||||     
T  31162303 tcactgcattaaagtctccgaaaggcatgttctgcctgttttctatgatgttgatccttatgagatgagatatcaaaaaggaaattatgttgaagccttt 31162204  T
Q  237 gctaaacatgaagaaagattccaacaaaactttgaaattgtgcaaagatggagggaagc 295  Q
       ||||||||| |||||||||||||| ||| ||| || ||||||||||||||||||||    
T  31162203 ttcaaacatgaacaaagattccaacaagactctgagatggtgcaaagatggagggaagc 31162145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 30 - 206
Target Start/End: Complemental strand, 31529292 - 31529116
Alignment:
Q  30 gcacctgaactccttcgagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctcagtttggtgtttgcgagaattggagt 129  Q
    ||||||||||||||||| || || |||| ||||| || |||  |||| || ||||| || |||||||||||||||  |||||| ||||| |||||| | |    
T  31529292 gcacctgaactccttcgtgctatcgaagcctctcggactttcattgttgtcttctcaaacaactatgcttcctcaacttggtgcttgcgggaattgcaat 31529193  T
Q  130 gcatacttcaaagctttcaactatctggaaaacgtgttctgcctgtgttctatgatgttgatccatcagaggtgcga 206  Q
     ||| |||||  || | ||||| ||||||||||||||||| ||||| ||||||||||||||||| || |||||||||    
T  31529192 acatccttcattgcgtacaactttctggaaaacgtgttctccctgttttctatgatgttgatccttccgaggtgcga 31529116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 30 - 295
Target Start/End: Original strand, 31488921 - 31489186
Alignment:
Q  30 gcacctgaactccttcgagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctcagtttggtgtttgcgagaattggagt 129  Q
    ||||| || ||| |||| ||||||||||  |||||| ||||  ||| |||  |||| || |||||||||||||||  |||||| |||||||||||||| |    
T  31488921 gcacccgagctcattcgtgcaattgaagggtctcaggttttcattgcggtcctctccaaaaactatgcttcctcaacttggtgcttgcgagaattggaat 31489020  T
Q  130 gcatacttcaaagctttcaactatctggaaaacgtgttctgcctgtgttctatgatgttgatccatcagaggtgcgatatcaaaaaggatgttatgctga 229  Q
     ||| |||||   |  |||| | | ||||| ||||||||| ||||| || |||||||||||||| || |||||| || |||||||||||  ||| | |||    
T  31489021 acatccttcactacagtcaagtttttggaagacgtgttcttcctgttttttatgatgttgatccttctgaggtgagacatcaaaaaggaatttacggtga 31489120  T
Q  230 agccttagctaaacatgaagaaagattccaacaaaactttgaaattgtgcaaagatggagggaagc 295  Q
    ||||||  | ||||||||| ||| |||||||||  ||| | |  | || |||||||||||||||||    
T  31489121 agccttttccaaacatgaacaaacattccaacatgactctcatgtggtacaaagatggagggaagc 31489186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 30 - 262
Target Start/End: Complemental strand, 31160033 - 31159801
Alignment:
Q  30 gcacctgaactccttcgagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctcagtttggtgtttgcgagaattggagt 129  Q
    ||||| || |||||||  |||||||||| |||  || ||||| ||||  | ||||| || |||||||||||||||   ||||| |||||||| ||||| |    
T  31160033 gcacccgagctccttcatgcaattgaagcctcaaaggtttttattgtactcttctcaaaaaactatgcttcctcaacatggtgcttgcgagagttggaat 31159934  T
Q  130 gcatacttcaaagctttcaactatctggaaaacgtgttctgcctgtgttctatgatgttgatccatcagaggtgcgatatcaaaaaggatgttatgctga 229  Q
     ||| |||||  ||  |||| | |||||||  |||||||| ||| | ||||||||||||||||| || |||||| || ||||||| ||| ||||||  ||    
T  31159933 acatccttcactgcagtcaagtttctggaactcgtgttctccctattttctatgatgttgatccttctgaggtgagacatcaaaatggaagttatggaga 31159834  T
Q  230 agccttagctaaacatgaagaaagattccaaca 262  Q
    |||| | || ||||| |||||||||||||||||    
T  31159833 agcccttgccaaacacgaagaaagattccaaca 31159801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 262
Target Start/End: Complemental strand, 31030499 - 31030280
Alignment:
Q  43 ttcgagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctcagtttggtgtttgcgagaattggagtgcatacttcaaag 142  Q
    |||| ||||||||||  |||||| ||||  ||| |||  |||| || |||||||||||||||  |||||| |||||||||||||    ||| ||| |  |    
T  31030499 ttcgtgcaattgaagggtctcaggttttcattgcggtcctctccaaaaactatgcttcctcaacttggtgcttgcgagaattggtacacatccttgactg 31030400  T
Q  143 ctttcaactatctggaaaacgtgttctgcctgtgttctatgatgttgatccatcagaggtgcgatatcaaaaaggatgttatgctgaagccttagctaaa 242  Q
    |  |||| | ||||||| ||||||||| ||||| || |||||||||||||| || |||||| || |||||||||||  ||| | |||||||||  | |||    
T  31030399 cagtcaagtttctggaagacgtgttcttcctgttttttatgatgttgatccttctgaggtgagacatcaaaaaggaatttacggtgaagccttttccaaa 31030300  T
Q  243 catgaagaaagattccaaca 262  Q
    |||||| ||| |||||||||    
T  31030299 catgaacaaacattccaaca 31030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 262
Target Start/End: Complemental strand, 31020618 - 31020399
Alignment:
Q  43 ttcgagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctcagtttggtgtttgcgagaattggagtgcatacttcaaag 142  Q
    |||| ||||||||||  |||||| ||||  ||| |||  |||| || |||||| ||||||||  |||||| |||||||||||||    ||| ||| |  |    
T  31020618 ttcgtgcaattgaagggtctcaggttttcattgcggtcctctccaaaaactattcttcctcaacttggtgcttgcgagaattggtacacatccttgactg 31020519  T
Q  143 ctttcaactatctggaaaacgtgttctgcctgtgttctatgatgttgatccatcagaggtgcgatatcaaaaaggatgttatgctgaagccttagctaaa 242  Q
    |  |||| | ||||||| ||||||||| ||||| || |||||||||||||| || |||||| || |||||||||||  ||| | |||||||||  | |||    
T  31020518 cagtcaagtttctggaagacgtgttcttcctgttttttatgatgttgatccttctgaggtgagacatcaaaaaggaatttacggtgaagccttttccaaa 31020419  T
Q  243 catgaagaaagattccaaca 262  Q
    |||||| ||| |||||||||    
T  31020418 catgaacaaacattccaaca 31020399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 158 - 295
Target Start/End: Original strand, 31496404 - 31496541
Alignment:
Q  158 aaaacgtgttctgcctgtgttctatgatgttgatccatcagaggtgcgatatcaaaaaggatgttatgctgaagccttagctaaacatgaagaaagattc 257  Q
    ||||| |||||||||||| |||||||||||||| || ||   ||||||| | ||||  |||  ||||| |||||| || |  ||||||||| ||||||||    
T  31496404 aaaacatgttctgcctgttttctatgatgttgacccttctatggtgcgaaagcaaagtggaatttatggtgaagcatttgtcaaacatgaacaaagattc 31496503  T
Q  258 caacaaaactttgaaattgtgcaaagatggagggaagc 295  Q
    |||||| ||| | | || ||||||||||||||||||||    
T  31496504 caacaagactctcagatggtgcaaagatggagggaagc 31496541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 42 - 295
Target Start/End: Original strand, 31501458 - 31501711
Alignment:
Q  42 cttcgagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctcagtttggtgtttgcgagaattggagtgcatacttcaaa 141  Q
    ||||| ||||||||||| ||| | |||||||||| |||  |||| | |||||||||||||||| ||||||| |||| |||||| ||    || ||| ||     
T  31501458 cttcgtgcaattgaagattcttatatttttgttgcggtcctctcaaggaactatgcttcctcaatttggtgcttgcaagaattagaaaagatccttgaat 31501557  T
Q  142 gctttcaactatctggaaaacgtgttctgcctgtgttctatgatgttgatccatcagaggtgcgatatcaaaaaggatgttatgctgaagccttagctaa 241  Q
    || | ||  |||||  ||||| |||||||||||| |||||||||||||||||  | | ||||||| | ||||  ||   ||||  |||||| || |  ||    
T  31501558 gcgtccacgtatctaaaaaacatgttctgcctgttttctatgatgttgatcctcccgtggtgcgaaagcaaagtgggatttattgtgaagcatttgtcaa 31501657  T
Q  242 acatgaagaaagattccaacaaaactttgaaattgtgcaaagatggagggaagc 295  Q
    ||||||| ||| |||||||||| ||| | | || |||| |||||||||||||||    
T  31501658 acatgaacaaatattccaacaagactctcagatggtgctaagatggagggaagc 31501711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 38 - 252
Target Start/End: Original strand, 31482180 - 31482397
Alignment:
Q  38 actccttcgagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctcagtttggtgtttgcgagaattggagtgca---ta 134  Q
    |||| |||| |||||||||| ||||||||||||  | ||||| || |||||||  ||||||||||||  |||||| ||||| |||||||  | ||   |     
T  31482180 actctttcgtgcaattgaagtctctcagattttcatcgtggtcttgtctaagagttatgcttcctcaacttggtgcttgcgtgaattggtatacatcctt 31482279  T
Q  135 cttcaaagctttcaactatctggaaaacgtgttctgcctgtgttctatgatgttgatccatcagaggtgcgatatcaaaaaggatgttatgctgaagcct 234  Q
    |||||  ||  ||||| ||| | ||||||||||| | |||| |||||||||||  ||||||| ||||| ||| | ||||  ||  |||||||| ||||||    
T  31482280 cttcactgcagtcaaccatcagaaaaacgtgttcggactgttttctatgatgtcaatccatctgaggtacgaaagcaaagtgggagttatgctaaagcct 31482379  T
Q  235 tagctaaacatgaagaaa 252  Q
    | || |||||||||||||    
T  31482380 ttgccaaacatgaagaaa 31482397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 127
Target Start/End: Original strand, 31476336 - 31476433
Alignment:
Q  30 gcacctgaactccttcgagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctcagtttggtgtttgcgagaattgga 127  Q
    |||||||||||| |||  ||||||||||  |||||| |||| |||||||| || || |||||||| |||| ||||  |||||| |||  |||||||||    
T  31476336 gcacctgaactctttcatgcaattgaagggtctcaggttttcgttgtggtcttgtcaaagaactacgctttctcaacttggtgcttgaaagaattgga 31476433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 31496285 - 31496350
Alignment:
Q  39 ctccttcgagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctca 104  Q
    |||||| | ||||||||| |||||||| ||||||||||||| || || | ||||||||||| ||||    
T  31496285 ctcctttgtgcaattgaaaactctcaggtttttgttgtggtcttatcaaggaactatgctttctca 31496350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 46 - 202
Target Start/End: Complemental strand, 12781493 - 12781337
Alignment:
Q  46 gagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctcagtttggtgtttgcgagaattggagtgcatacttcaaagctt 145  Q
    |||||||||||| ||||||| |||   |||| || ||||||||||||||||||||||||  ||||||||||||||||||||| | ||| |||||  ||      
T  12781493 gagcaattgaagcctctcaggtttacattgttgtattctctaagaactatgcttcctcaacttggtgtttgcgagaattggaatacatccttcattgcag 12781394  T
Q  146 tcaactatctggaaaacgtgttctgcctgtgttctatgatgttgatccatcagaggt 202  Q
    | ||  |  ||||||||  ||||| ||||| ||||||||||||||||| || |||||    
T  12781393 taaaaaacatggaaaacacgttcttcctgttttctatgatgttgatccttctgaggt 12781337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 46 - 127
Target Start/End: Complemental strand, 12785683 - 12785602
Alignment:
Q  46 gagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctcagtttggtgtttgcgagaattgga 127  Q
    |||||||||||| ||||||| |||   |||| || |||||||||||||||||||| |||  |||||||||||||||||||||    
T  12785683 gagcaattgaagcctctcagctttacattgttgtattctctaagaactatgcttcttcaacttggtgtttgcgagaattgga 12785602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 124
Target Start/End: Complemental strand, 12782243 - 12782166
Alignment:
Q  47 agcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctcagtttggtgtttgcgagaatt 124  Q
    ||||||||||| ||||||| ||||  |||| || |||||||| ||||||||||| |||  ||||||||||||||||||    
T  12782243 agcaattgaaggctctcaggttttcattgttgtattctctaaaaactatgcttcttcaacttggtgtttgcgagaatt 12782166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 295
Target Start/End: Complemental strand, 33307049 - 33306981
Alignment:
Q  227 tgaagccttagctaaacatgaagaaagattccaacaaaactttgaaattgtgcaaagatggagggaagc 295  Q
    ||||||||| |  ||||||||| |||||||||||||| ||||||| || |||  |||||||||||||||    
T  33307049 tgaagcctttgtcaaacatgaacaaagattccaacaagactttgagatggtgtcaagatggagggaagc 33306981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 263
Target Start/End: Complemental strand, 33060189 - 33060082
Alignment:
Q  156 ggaaaacgtgttctgcctgtgttctatgatgttgatccatcagaggtgcgatatcaaaaaggatgttatgctgaagccttagctaaacatgaagaaagat 255  Q
    ||||||| |||||| ||||| ||||||||||||||||| || ||||||||  | ||||  |||  ||||  |||||| || |  ||||||||| ||||||    
T  33060189 ggaaaacatgttcttcctgttttctatgatgttgatccttctgaggtgcggaagcaaagtggaatttatagtgaagcttttgtcaaacatgaacaaagat 33060090  T
Q  256 tccaacaa 263  Q
    ||||||||    
T  33060089 tccaacaa 33060082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 240 - 295
Target Start/End: Original strand, 33642147 - 33642202
Alignment:
Q  240 aaacatgaagaaagattccaacaaaactttgaaattgtgcaaagatggagggaagc 295  Q
    ||||||||| |||||||||||||| ||||| |||| |||  |||||||||||||||    
T  33642147 aaacatgaacaaagattccaacaagactttcaaatggtgtcaagatggagggaagc 33642202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 205
Target Start/End: Complemental strand, 33361132 - 33361083
Alignment:
Q  156 ggaaaacgtgttctgcctgtgttctatgatgttgatccatcagaggtgcg 205  Q
    ||||||| |||||| ||||| ||||||||||||||||| || ||||||||    
T  33361132 ggaaaacatgttcttcctgttttctatgatgttgatccttctgaggtgcg 33361083  T

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Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 267
Target Start/End: Complemental strand, 33390705 - 33390596
Alignment:
Q  158 aaaacgtgttctgcctgtgttctatgatgttgatccatcagaggtgcgatatcaaaaaggatgttatgctgaagccttagctaaacatgaagaaagattc 257  Q
    ||||| |||||| ||||| || |||||||||||||| || ||||| ||| | ||||  |||  ||||| | |||| || |  ||||||||| ||||||||    
T  33390705 aaaacttgttcttcctgttttttatgatgttgatccttctgaggttcgaaagcaaagtggaatttatgataaagcttttgtcaaacatgaacaaagattc 33390606  T
Q  258 caacaaaact 267  Q
    ||||||||||    
T  33390605 caacaaaact 33390596  T

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Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 104
Target Start/End: Complemental strand, 33307244 - 33307172
Alignment:
Q  32 acctgaactccttcgagcaattgaagactctcagatttttgttgtggttttctctaagaactatgcttcctca 104  Q
    |||||| |||||||||||||| ||||  |||| | |||||||||  || ||||| | ||||||||||||||||    
T  33307244 acctgagctccttcgagcaatcgaaggatctcgggtttttgttgcagtcttctcaaggaactatgcttcctca 33307172  T

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Target: chr2 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 156 - 263
Target Start/End: Original strand, 17438135 - 17438242
Alignment:
Q  156 ggaaaacgtgttctgcctgtgttctatgatgttgatccatcagaggtgcgatatcaaaaaggatgttatgctgaagccttagctaaacatgaagaaagat 255  Q
    ||||||| |||||| ||||| ||||||||||||||||| || ||||||||| | ||||  ||   ||||  |||||| || |  ||||||||| ||||||    
T  17438135 ggaaaacatgttcttcctgttttctatgatgttgatccttctgaggtgcgaaagcaaagtgggatttatcatgaagcttttgtcaaacatgaacaaagat 17438234  T
Q  256 tccaacaa 263  Q
    ||||||||    
T  17438235 tccaacaa 17438242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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