View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20578_low_77 (Length: 234)
Name: NF20578_low_77
Description: NF20578
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20578_low_77 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 7 - 234
Target Start/End: Complemental strand, 5970517 - 5970290
Alignment:
| Q |
7 |
ggccattgagctaaacaacaatgtttaagttaattactaattagtgtaacctaaataaaaagccattgttatcctagatatttgggctttccatggtttc |
106 |
Q |
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| T |
5970517 |
ggccattgagctaaacaacaatgtttaagttaattactaattagtgtaacctaaataaaaagccattgttatcctagatatttgggctttccatggtttc |
5970418 |
T |
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| Q |
107 |
ttgaccatgttataagaacccataatttgggagagacacaatgaagcttcctaatatgtactatattttcaaattaaagttctatatcaacttaattaag |
206 |
Q |
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| T |
5970417 |
ttgaccatgttataagaacccataatttgggagagacacaatgaagcttcctaatatgtactatattttcaaattaaagttctatatcaacttaattaag |
5970318 |
T |
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| Q |
207 |
taaatcaacatttcgatcttcaaggatt |
234 |
Q |
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|||||||||| ||||||||||||||||| |
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| T |
5970317 |
taaatcaacaattcgatcttcaaggatt |
5970290 |
T |
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