View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF2057_high_1 (Length: 809)
Name: NF2057_high_1
Description: NF2057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2057_high_1 |
 | |
|
| [»] scaffold0568 (4 HSPs) |
| | |
|
| [»] scaffold0576 (1 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0568 (Bit Score: 591; Significance: 0; HSPs: 4)
Name: scaffold0568
Description:
Target: scaffold0568; HSP #1
Raw Score: 591; E-Value: 0
Query Start/End: Original strand, 116 - 794
Target Start/End: Complemental strand, 2631 - 1940
Alignment:
| Q |
116 |
gtgactgatgcaaaggtatacaaagacccaaaaactatccggaaaggcagctggacaagaacaatgaccccctatgcataacaccacaccaaaccaagcc |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
2631 |
gtgactgatgcaaaggtatacaaagacccaaaaactatccggaaaggcagccggacaagaacaatgaccccctatgcataacaccgcaccaaacccagcc |
2532 |
T |
|
| Q |
216 |
cccaaccacaccaacacgtgctgaaccgcaccacagaagctgctggcagcagcaaacaccagctgacagcag-------------cagccgcccctaaca |
302 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
2531 |
cccaagcacaccaacacgtgctgaaccgcaccacagaagctgctggcagcagcaaacaccagctgacagcaggtgcacacagcagcagccgcccctaaca |
2432 |
T |
|
| Q |
303 |
gaaggcagcacccaccaaaacagcaaacagaacatgcgaacacnnnnnnntcagaacctgtcaaaattttgcaattataaccacatttttgggagatata |
402 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
2431 |
gaaggcagcacccaccaaaacagcaaacagaacctgcgaacacaaaaaaaccagaacctgtcaaaattttgcaattataaccacatttttgggagttata |
2332 |
T |
|
| Q |
403 |
tttgggtcaaataatggcaacaggtaggcttccagtgcattaccatgctcttcaagaaacaataagttactaagaagtacaaagtaatgtcagtgtaaac |
502 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2331 |
tttgggtcaaataatggcaacaggtaggcttccagtgcattaccatgctcttcaagaaacaataagttactaagaagtacaaagtaatgtcagtgtaaac |
2232 |
T |
|
| Q |
503 |
acttaaatacttaaatccttgaatattttttgactctgaattctctcaacaattccaaccacaatcagcaaagacgtcttcatcccctatatatcaagcc |
602 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2231 |
acttaaatacttaaatccttgaatattttttgactctgaattctctcaacaattccaaccacaatcagcaaagacgtcttcatcccctatatatcaagcc |
2132 |
T |
|
| Q |
603 |
cataaacaataaataaattaggagaaaaaagttaacaaaatgcaatagtaaccagcccatattttttcgaagcaatgaactctttctacacttgatgctc |
702 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2131 |
cataaacaataaataaattaggagaaaaaagttaacaaaatgcaatagtaaccagcccatattttttcgaagcaatgaactctttctacacttgatgctc |
2032 |
T |
|
| Q |
703 |
aaaccttactagagattaaaccatattgaaaagtaaagaacatgctcaagttaaaaatctgctcaaatgttaaccttctctaataataaagt |
794 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
2031 |
aaaccttactagagattaaaccatattgaaaagtaaagaacatgctcaagttaaaaatctgctcaaatgttaactttctttaataataaagt |
1940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0568; HSP #2
Raw Score: 591; E-Value: 0
Query Start/End: Original strand, 116 - 794
Target Start/End: Complemental strand, 9233 - 8542
Alignment:
| Q |
116 |
gtgactgatgcaaaggtatacaaagacccaaaaactatccggaaaggcagctggacaagaacaatgaccccctatgcataacaccacaccaaaccaagcc |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
9233 |
gtgactgatgcaaaggtatacaaagacccaaaaactatccggaaaggcagccggacaagaacaatgaccccctatgcataacaccgcaccaaacccagcc |
9134 |
T |
|
| Q |
216 |
cccaaccacaccaacacgtgctgaaccgcaccacagaagctgctggcagcagcaaacaccagctgacagcag-------------cagccgcccctaaca |
302 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
9133 |
cccaagcacaccaacacgtgctgaaccgcaccacagaagctgctggcagcagcaaacaccagctgacagcaggtgcacacagcagcagccgcccctaaca |
9034 |
T |
|
| Q |
303 |
gaaggcagcacccaccaaaacagcaaacagaacatgcgaacacnnnnnnntcagaacctgtcaaaattttgcaattataaccacatttttgggagatata |
402 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
9033 |
gaaggcagcacccaccaaaacagcaaacagaacctgcgaacacaaaaaaaccagaacctgtcaaaattttgcaattataaccacatttttgggagttata |
8934 |
T |
|
| Q |
403 |
tttgggtcaaataatggcaacaggtaggcttccagtgcattaccatgctcttcaagaaacaataagttactaagaagtacaaagtaatgtcagtgtaaac |
502 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8933 |
tttgggtcaaataatggcaacaggtaggcttccagtgcattaccatgctcttcaagaaacaataagttactaagaagtacaaagtaatgtcagtgtaaac |
8834 |
T |
|
| Q |
503 |
acttaaatacttaaatccttgaatattttttgactctgaattctctcaacaattccaaccacaatcagcaaagacgtcttcatcccctatatatcaagcc |
602 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8833 |
acttaaatacttaaatccttgaatattttttgactctgaattctctcaacaattccaaccacaatcagcaaagacgtcttcatcccctatatatcaagcc |
8734 |
T |
|
| Q |
603 |
cataaacaataaataaattaggagaaaaaagttaacaaaatgcaatagtaaccagcccatattttttcgaagcaatgaactctttctacacttgatgctc |
702 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8733 |
cataaacaataaataaattaggagaaaaaagttaacaaaatgcaatagtaaccagcccatattttttcgaagcaatgaactctttctacacttgatgctc |
8634 |
T |
|
| Q |
703 |
aaaccttactagagattaaaccatattgaaaagtaaagaacatgctcaagttaaaaatctgctcaaatgttaaccttctctaataataaagt |
794 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |
|
|
| T |
8633 |
aaaccttactagagattaaaccatattgaaaagtaaagaacatgctcaagttaaaaatctgctcaaatgttaactttctttaataataaagt |
8542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0568; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 2736 - 2699
Alignment:
| Q |
11 |
cacagacaagggtgtcgtatataggcggaacacctgac |
48 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
2736 |
cacaaacaaggttgtcgtatataggcggaacacctgac |
2699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0568; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 9338 - 9301
Alignment:
| Q |
11 |
cacagacaagggtgtcgtatataggcggaacacctgac |
48 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
9338 |
cacaaacaaggttgtcgtatataggcggaacacctgac |
9301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 356; Significance: 0; HSPs: 4)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 356; E-Value: 0
Query Start/End: Original strand, 116 - 574
Target Start/End: Complemental strand, 17060655 - 17060184
Alignment:
| Q |
116 |
gtgactgatgcaaaggtatacaaagacccaaaaactatccggaaaggcagctggacaagaacaatgaccccctatgcataacaccacaccaaaccaagcc |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
17060655 |
gtgactgatgcaaaggtatacaaagacccaaaa-ctatccggaaaggcagccagacaagaacaatgaccccctatgcataacaccgcaccaaaccaagcc |
17060557 |
T |
|
| Q |
216 |
cccaaccacaccaacacgtgctgaaccgcaccacagaagctgctggcagcagcaaacaccagctgacagcag-------------cagccgcccc-taac |
301 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
17060556 |
cccaaccacaccaacacgtgctgaaccgcaccacagaagctgctggcagcagcaaacaccagctgacagcaggtgcacacagcagcagccgccccctaac |
17060457 |
T |
|
| Q |
302 |
agaaggcagcacccaccaaaacagcaaacagaacatgcgaacacnnnnnnntcagaacctgtcaaaattttgcaattataaccacatttttgggagatat |
401 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||| || |||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17060456 |
agaaggcagcacccaccaaaacagcaaacagaacctgcgaacacaaaaaaaccataaccggtcaaaattttgcaattataaccacatttttgggagatat |
17060357 |
T |
|
| Q |
402 |
atttgggtcaaataatggcaacaggtaggcttccagtgcattaccatgctcttcaagaaacaataagttactaagaagtacaaagtaatgtcagtgtaaa |
501 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17060356 |
atttgggtcaaataatggcaacaggtaggcttccagtgcattgccatgctcttcaagaaacaataagttactaagaagtacaaagtaatgtcagtgtaaa |
17060257 |
T |
|
| Q |
502 |
cacttaaatacttaaatccttgaatattttttgactctgaattctctcaacaattccaaccacaatcagcaaa |
574 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
17060256 |
cacttaaatacttaaatccttgaatattttttgactttgaattctctcaacaattccaaccacaatcagcaaa |
17060184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 168; E-Value: 1e-89
Query Start/End: Original strand, 627 - 794
Target Start/End: Complemental strand, 17060186 - 17060019
Alignment:
| Q |
627 |
aaaaaagttaacaaaatgcaatagtaaccagcccatattttttcgaagcaatgaactctttctacacttgatgctcaaaccttactagagattaaaccat |
726 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17060186 |
aaaaaagttaacaaaatgcaatagtaaccagcccatattttttcgaagcaatgaactctttctacacttgatgctcaaaccttactagagattaaaccat |
17060087 |
T |
|
| Q |
727 |
attgaaaagtaaagaacatgctcaagttaaaaatctgctcaaatgttaaccttctctaataataaagt |
794 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17060086 |
attgaaaagtaaagaacatgctcaagttaaaaatctgctcaaatgttaaccttctctaataataaagt |
17060019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 463 - 517
Target Start/End: Complemental strand, 18198994 - 18198940
Alignment:
| Q |
463 |
aataagttactaagaagtacaaagtaatgtcagtgtaaacacttaaatacttaaa |
517 |
Q |
| |
|
|||||| | |||||||||||||| |||||||||||||||| ||||||| |||||| |
|
|
| T |
18198994 |
aataagcttctaagaagtacaaaataatgtcagtgtaaacgcttaaatccttaaa |
18198940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 17060760 - 17060723
Alignment:
| Q |
11 |
cacagacaagggtgtcgtatataggcggaacacctgac |
48 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
17060760 |
cacaaacaagggtgtcgtatataggcggaacacctgac |
17060723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 133; Significance: 1e-68; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 116 - 344
Target Start/End: Complemental strand, 48224123 - 48223874
Alignment:
| Q |
116 |
gtgactgatgcaaaggtatacaaagacccaaaaactatccggaaaggcagctggacaagaacaatgaccccctatgcataacaccacaccaaaccaagcc |
215 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||| || ||||||||| |||| |
|
|
| T |
48224123 |
gtgactgatgcaaaggtatacaaagacccaaaaactatccggaaaggcagccggacaagaacaatgaccccctacgcataacgccgcaccaaacccagcc |
48224024 |
T |
|
| Q |
216 |
cccaaccacaccaacacgtgctgaaccgcaccacagaagctgctggcagcagc--------aaacaccagctgac-------------agcagcagccgc |
294 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||| || || | |||||||||||||| |||||||||||| |
|
|
| T |
48224023 |
cccaagcacaccaacacgtgctgaaccgcaccacagaagctgctgacaacaacaacaaaaaaaacaccagctgacagcaggtgcacatagcagcagccgc |
48223924 |
T |
|
| Q |
295 |
ccctaacagaaggcagcacccaccaaaacagcaaacagaacatgcgaaca |
344 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
48223923 |
ccttaacagaaggcagcacccaccaaaacagcaaacagaacctgcgaaca |
48223874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 463 - 510
Target Start/End: Complemental strand, 20264855 - 20264808
Alignment:
| Q |
463 |
aataagttactaagaagtacaaagtaatgtcagtgtaaacacttaaat |
510 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
20264855 |
aataagctactaagaagtacaaaataatgtcagtgtaaccacttaaat |
20264808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 48
Target Start/End: Complemental strand, 48224216 - 48224179
Alignment:
| Q |
11 |
cacagacaagggtgtcgtatataggcggaacacctgac |
48 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||| |
|
|
| T |
48224216 |
cacaaacaaggatgtcgtatataggcggaacacctgac |
48224179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 70; Significance: 4e-31; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 373 - 466
Target Start/End: Complemental strand, 29158190 - 29158097
Alignment:
| Q |
373 |
gcaattataaccacatttttgggagatatatttgggtcaaataatggcaacaggtaggcttccagtgcattaccatgctcttcaagaaacaata |
466 |
Q |
| |
|
||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||| ||||||||||| |
|
|
| T |
29158190 |
gcaattatagccacatttctgggagatatatttgggtcaaatattggcaacaggtaggcttccaatgcattaccttgctcttgaagaaacaata |
29158097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 546 - 653
Target Start/End: Original strand, 21990432 - 21990540
Alignment:
| Q |
546 |
tctcaacaattccaaccacaatcagcaaagacgtcttcatcccctatatatcaag-cccataaacaataaataaattaggagaaaaaagttaacaaaatg |
644 |
Q |
| |
|
||||| |||||||||||||||||||||| || |||||||||||||||||| | | ||||||||||||||| | |||||||||||| ||||||||||||| |
|
|
| T |
21990432 |
tctcatcaattccaaccacaatcagcaactacatcttcatcccctatatataagggcccataaacaataaacagattaggagaaaagagttaacaaaatg |
21990531 |
T |
|
| Q |
645 |
caatagtaa |
653 |
Q |
| |
|
||||||||| |
|
|
| T |
21990532 |
caatagtaa |
21990540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 463 - 510
Target Start/End: Complemental strand, 28658687 - 28658640
Alignment:
| Q |
463 |
aataagttactaagaagtacaaagtaatgtcagtgtaaacacttaaat |
510 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
28658687 |
aataagctactaagaagtacaaaataatgtcagtgtaaccacttaaat |
28658640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0576 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0576
Description:
Target: scaffold0576; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 463 - 517
Target Start/End: Complemental strand, 4591 - 4537
Alignment:
| Q |
463 |
aataagttactaagaagtacaaagtaatgtcagtgtaaacacttaaatacttaaa |
517 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
4591 |
aataagctactaagaagtacaaaataatgtcagtgtaaccacttaaatacttaaa |
4537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 463 - 517
Target Start/End: Complemental strand, 3734140 - 3734086
Alignment:
| Q |
463 |
aataagttactaagaagtacaaagtaatgtcagtgtaaacacttaaatacttaaa |
517 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
3734140 |
aataagctactaagaagtacaaaataatgtcagtgtaaccacttaaatacttaaa |
3734086 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 463 - 517
Target Start/End: Original strand, 2751955 - 2752009
Alignment:
| Q |
463 |
aataagttactaagaagtacaaagtaatgtcagtgtaaacacttaaatacttaaa |
517 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
2751955 |
aataagctactaagaagtacaaaataatgtcagtgtaaccacttaaatacttaaa |
2752009 |
T |
|
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Target: chr6 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 463 - 517
Target Start/End: Complemental strand, 15359607 - 15359553
Alignment:
| Q |
463 |
aataagttactaagaagtacaaagtaatgtcagtgtaaacacttaaatacttaaa |
517 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
15359607 |
aataagctactaagaagtacaaaataatgtcagtgtaaccacttaaatacttaaa |
15359553 |
T |
|
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Target: chr5 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 680 - 745
Target Start/End: Complemental strand, 5523996 - 5523931
Alignment:
| Q |
680 |
aactctttctacacttgatgctcaaaccttactagagattaaaccatattgaaaagtaaagaacat |
745 |
Q |
| |
|
||||||||||| ||||||||||||||||||| | |||||||||||||||||| |||||| ||||| |
|
|
| T |
5523996 |
aactctttctatacttgatgctcaaaccttattgaagattaaaccatattgaagagtaaaaaacat |
5523931 |
T |
|
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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 463 - 517
Target Start/End: Original strand, 288803 - 288857
Alignment:
| Q |
463 |
aataagttactaagaagtacaaagtaatgtcagtgtaaacacttaaatacttaaa |
517 |
Q |
| |
|
|||||| | |||||||||||||| |||||||||||||||| ||||||| |||||| |
|
|
| T |
288803 |
aataagcttctaagaagtacaaaataatgtcagtgtaaacgcttaaatccttaaa |
288857 |
T |
|
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