View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2057_high_3 (Length: 634)

Name: NF2057_high_3
Description: NF2057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2057_high_3
NF2057_high_3
[»] chr2 (75 HSPs)
chr2 (4-402)||(21998148-21998548)
chr2 (1-301)||(28468702-28469002)
chr2 (1-403)||(45428549-45428952)
chr2 (1-372)||(7185020-7185390)
chr2 (1-301)||(17420629-17420928)
chr2 (106-301)||(42505578-42505774)
chr2 (1-301)||(39947660-39947961)
chr2 (1-229)||(45137144-45137372)
chr2 (1-297)||(32956066-32956351)
chr2 (1-229)||(25964945-25965181)
chr2 (270-402)||(5355538-5355670)
chr2 (284-403)||(44100819-44100938)
chr2 (284-403)||(18000165-18000284)
chr2 (284-402)||(30493293-30493411)
chr2 (282-403)||(17420501-17420622)
chr2 (284-403)||(41564513-41564632)
chr2 (283-403)||(208943-209063)
chr2 (283-395)||(10619940-10620052)
chr2 (284-398)||(5351753-5351867)
chr2 (284-402)||(7267465-7267583)
chr2 (284-402)||(43536036-43536154)
chr2 (289-402)||(15835237-15835350)
chr2 (279-398)||(38950543-38950661)
chr2 (289-404)||(42499685-42499799)
chr2 (283-404)||(43619162-43619283)
chr2 (289-398)||(3935768-3935876)
chr2 (284-399)||(22003422-22003537)
chr2 (289-402)||(17426425-17426537)
chr2 (286-403)||(20937831-20937948)
chr2 (286-405)||(15831058-15831177)
chr2 (285-402)||(43312666-43312783)
chr2 (284-404)||(28468573-28468693)
chr2 (296-398)||(43984368-43984469)
chr2 (285-402)||(26543238-26543355)
chr2 (286-402)||(30496972-30497088)
chr2 (291-402)||(29074031-29074141)
chr2 (286-404)||(39793895-39794013)
chr2 (300-402)||(42505799-42505901)
chr2 (294-407)||(44100631-44100744)
chr2 (286-402)||(39800675-39800791)
chr2 (284-403)||(39947533-39947651)
chr2 (317-407)||(3940783-3940873)
chr2 (300-398)||(43978474-43978572)
chr2 (284-407)||(10424769-10424891)
chr2 (284-399)||(30803039-30803153)
chr2 (356-402)||(3085971-3086017)
chr2 (1-83)||(35464316-35464398)
chr2 (285-393)||(213474-213583)
chr2 (286-402)||(5351897-5352014)
chr2 (285-393)||(10624487-10624596)
chr2 (284-372)||(41273269-41273356)
chr2 (4-83)||(31367308-31367387)
chr2 (332-399)||(43539806-43539873)
chr2 (284-402)||(7189972-7190089)
chr2 (284-402)||(28477088-28477205)
chr2 (284-402)||(36510877-36510994)
chr2 (285-393)||(18003294-18003403)
chr2 (284-339)||(17426386-17426441)
chr2 (270-301)||(30493420-30493451)
chr2 (356-403)||(39033032-39033079)
chr2 (317-392)||(39489128-39489203)
chr2 (356-403)||(39951242-39951289)
chr2 (284-339)||(42499783-42499838)
chr2 (270-301)||(43536163-43536194)
chr2 (282-340)||(39798439-39798497)
chr2 (169-226)||(3937994-3938051)
chr2 (260-305)||(3940700-3940745)
chr2 (260-305)||(15831184-15831229)
chr2 (169-226)||(17424006-17424063)
chr2 (260-305)||(20937955-20938000)
chr2 (29-86)||(25515549-25515606)
chr2 (169-226)||(43982073-43982130)
chr2 (284-325)||(43984322-43984363)
chr2 (350-402)||(1149406-1149458)
chr2 (317-389)||(29947715-29947787)
[»] chr8 (81 HSPs)
chr8 (1-401)||(15036440-15036840)
chr8 (1-264)||(45064339-45064602)
chr8 (1-300)||(41249785-41250083)
chr8 (1-301)||(39601765-39602076)
chr8 (1-393)||(43211475-43211866)
chr8 (1-301)||(39938928-39939227)
chr8 (1-301)||(42485250-42485550)
chr8 (1-301)||(489341-489641)
chr8 (1-367)||(39252021-39252372)
chr8 (1-229)||(43188182-43188410)
chr8 (1-302)||(39846698-39847003)
chr8 (1-229)||(25864652-25864879)
chr8 (1-210)||(40076962-40077171)
chr8 (1-229)||(34822729-34822960)
chr8 (270-402)||(21720-21852)
chr8 (284-404)||(22014178-22014298)
chr8 (284-402)||(26663054-26663172)
chr8 (100-301)||(35026548-35026749)
chr8 (290-403)||(36677645-36677758)
chr8 (284-404)||(7344578-7344698)
chr8 (284-402)||(23018619-23018737)
chr8 (284-402)||(1056222-1056340)
chr8 (288-398)||(17924308-17924418)
chr8 (284-398)||(32375589-32375703)
chr8 (289-398)||(483721-483829)
chr8 (129-226)||(5304010-5304107)
chr8 (284-386)||(8419354-8419456)
chr8 (289-403)||(22519622-22519735)
chr8 (284-402)||(15030818-15030936)
chr8 (284-402)||(45066382-45066500)
chr8 (1-75)||(5303933-5304007)
chr8 (1-86)||(24249759-24249844)
chr8 (1-86)||(37327080-37327164)
chr8 (284-404)||(184573-184693)
chr8 (309-393)||(17924044-17924128)
chr8 (284-404)||(36677950-36678070)
chr8 (257-372)||(22014429-22014544)
chr8 (284-402)||(1052492-1052610)
chr8 (291-402)||(2878518-2878629)
chr8 (289-403)||(42481459-42481574)
chr8 (27-89)||(2984395-2984457)
chr8 (286-399)||(26659391-26659504)
chr8 (284-404)||(2335169-2335288)
chr8 (284-404)||(23022308-23022428)
chr8 (335-402)||(184309-184376)
chr8 (284-402)||(27501535-27501652)
chr8 (332-404)||(489695-489767)
chr8 (284-403)||(28617502-28617620)
chr8 (317-402)||(25588-25673)
chr8 (1-53)||(22495216-22495268)
chr8 (286-398)||(22510486-22510598)
chr8 (21-65)||(35026740-35026784)
chr8 (284-375)||(10749695-10749785)
chr8 (284-403)||(43363281-43363399)
chr8 (284-403)||(44933793-44933911)
chr8 (284-393)||(30305564-30305674)
chr8 (300-402)||(42485575-42485677)
chr8 (287-372)||(45409836-45409920)
chr8 (284-339)||(22519583-22519638)
chr8 (284-397)||(8423810-8423924)
chr8 (284-402)||(914655-914769)
chr8 (284-402)||(27502589-27502703)
chr8 (284-402)||(28618460-28618574)
chr8 (333-398)||(30301160-30301224)
chr8 (285-393)||(32378943-32379052)
chr8 (285-393)||(32432898-32433007)
chr8 (278-404)||(32585008-32585130)
chr8 (284-372)||(22550886-22550973)
chr8 (356-404)||(31185537-31185585)
chr8 (284-339)||(483813-483868)
chr8 (356-403)||(915727-915774)
chr8 (270-301)||(23018746-23018777)
chr8 (270-301)||(26663014-26663045)
chr8 (332-402)||(2416137-2416207)
chr8 (332-402)||(43362258-43362328)
chr8 (169-226)||(486192-486249)
chr8 (332-393)||(5532405-5532466)
chr8 (285-393)||(7340009-7340118)
chr8 (343-404)||(45064224-45064285)
chr8 (106-138)||(489078-489110)
chr8 (285-317)||(45064298-45064330)
[»] chr5 (46 HSPs)
chr5 (1-402)||(8580217-8580618)
chr5 (1-375)||(14401-14774)
chr5 (1-305)||(28876700-28877004)
chr5 (1-301)||(7757386-7757685)
chr5 (1-301)||(28241511-28241811)
chr5 (1-226)||(512484-512709)
chr5 (1-226)||(19228384-19228609)
chr5 (1-226)||(38968231-38968458)
chr5 (1-215)||(42942198-42942413)
chr5 (1-229)||(42537277-42537510)
chr5 (284-402)||(28238073-28238191)
chr5 (284-399)||(28876580-28876695)
chr5 (284-404)||(14280921-14281041)
chr5 (284-403)||(37814515-37814634)
chr5 (289-404)||(19035137-19035251)
chr5 (1-197)||(40624636-40624831)
chr5 (1-197)||(8701936-8702131)
chr5 (284-404)||(13837656-13837776)
chr5 (284-404)||(19041138-19041258)
chr5 (284-403)||(27659873-27659992)
chr5 (284-402)||(8574617-8574734)
chr5 (1-86)||(20422215-20422300)
chr5 (300-402)||(11027029-11027131)
chr5 (284-402)||(30711180-30711298)
chr5 (1-197)||(17658488-17658683)
chr5 (286-402)||(11033485-11033601)
chr5 (332-403)||(38860237-38860308)
chr5 (284-393)||(14279792-14279902)
chr5 (284-402)||(3892461-3892575)
chr5 (300-403)||(28241836-28241939)
chr5 (286-372)||(30705101-30705187)
chr5 (300-402)||(38853413-38853515)
chr5 (284-402)||(3891418-3891535)
chr5 (346-404)||(37820930-37820988)
chr5 (169-229)||(28880203-28880263)
chr5 (169-229)||(30708785-30708845)
chr5 (284-340)||(38855732-38855788)
chr5 (270-301)||(28238200-28238231)
chr5 (284-399)||(28886414-28886529)
chr5 (317-403)||(5710-5796)
chr5 (284-322)||(8574761-8574799)
chr5 (282-340)||(11029023-11029081)
chr5 (273-319)||(42942461-42942507)
chr5 (260-301)||(19041088-19041129)
chr5 (106-138)||(28241248-28241280)
chr5 (286-402)||(38408490-38408605)
[»] scaffold0634 (2 HSPs)
scaffold0634 (1-301)||(7479-7779)
scaffold0634 (284-402)||(7352-7470)
[»] chr1 (58 HSPs)
chr1 (1-301)||(29622136-29622436)
chr1 (1-301)||(30890122-30890422)
chr1 (27-301)||(22524187-22524461)
chr1 (118-305)||(19924812-19925001)
chr1 (1-229)||(52802265-52802492)
chr1 (1-229)||(47502448-47502676)
chr1 (1-301)||(31783440-31783727)
chr1 (4-226)||(35258588-35258809)
chr1 (1-226)||(23275816-23276045)
chr1 (1-225)||(51320851-51321075)
chr1 (1-226)||(45825023-45825237)
chr1 (284-403)||(8548690-8548809)
chr1 (1-226)||(11183314-11183542)
chr1 (1-155)||(19527255-19527409)
chr1 (284-402)||(3728669-3728787)
chr1 (284-403)||(15051369-15051488)
chr1 (284-404)||(26879316-26879436)
chr1 (284-398)||(38771567-38771681)
chr1 (284-404)||(3943906-3944026)
chr1 (284-388)||(29622445-29622549)
chr1 (284-398)||(20353956-20354070)
chr1 (284-403)||(3993864-3993983)
chr1 (289-403)||(19928871-19928985)
chr1 (1-89)||(11196153-11196241)
chr1 (131-229)||(2425528-2425626)
chr1 (300-398)||(20556836-20556934)
chr1 (260-402)||(3732350-3732492)
chr1 (27-139)||(2425113-2425224)
chr1 (300-404)||(13629336-13629440)
chr1 (300-403)||(19924688-19924791)
chr1 (285-403)||(2365168-2365286)
chr1 (318-408)||(8473711-8473801)
chr1 (260-402)||(26875627-26875769)
chr1 (286-403)||(22397753-22397870)
chr1 (300-407)||(30889990-30890097)
chr1 (289-402)||(38633179-38633292)
chr1 (284-404)||(19161825-19161944)
chr1 (286-402)||(44621140-44621256)
chr1 (284-403)||(19914400-19914518)
chr1 (284-402)||(586626-586743)
chr1 (332-402)||(30195452-30195522)
chr1 (285-393)||(3983029-3983138)
chr1 (1-86)||(19925018-19925103)
chr1 (285-393)||(31945883-31945992)
chr1 (333-402)||(43012714-43012783)
chr1 (169-224)||(13636271-13636326)
chr1 (285-393)||(38776148-38776257)
chr1 (356-404)||(43011760-43011808)
chr1 (270-301)||(3728796-3728827)
chr1 (270-301)||(8548650-8548681)
chr1 (356-402)||(4883168-4883214)
chr1 (332-402)||(22528666-22528736)
chr1 (4-53)||(17514421-17514470)
chr1 (1-86)||(49857655-49857740)
chr1 (260-304)||(2365293-2365337)
chr1 (106-138)||(30890653-30890685)
chr1 (356-404)||(47652660-47652708)
chr1 (356-404)||(49661825-49661873)
[»] chr4 (92 HSPs)
chr4 (1-301)||(21022600-21022900)
chr4 (1-301)||(40357992-40358292)
chr4 (1-303)||(50274793-50275095)
chr4 (1-301)||(1308826-1309126)
chr4 (1-301)||(1089296-1089596)
chr4 (1-301)||(30726453-30726753)
chr4 (1-229)||(55407499-55407731)
chr4 (1-229)||(67725-67952)
chr4 (1-223)||(50901620-50901841)
chr4 (1-226)||(51683337-51683563)
chr4 (1-226)||(48256283-48256509)
chr4 (270-402)||(30723055-30723187)
chr4 (99-301)||(8109452-8109656)
chr4 (285-402)||(49169119-49169236)
chr4 (284-404)||(37562997-37563117)
chr4 (284-403)||(31425339-31425458)
chr4 (284-402)||(54633746-54633864)
chr4 (284-402)||(1089605-1089723)
chr4 (284-391)||(40358301-40358408)
chr4 (289-404)||(49096378-49096492)
chr4 (283-404)||(1087792-1087913)
chr4 (1-89)||(37021795-37021883)
chr4 (284-398)||(49563778-49563892)
chr4 (403-484)||(51536090-51536171)
chr4 (1-205)||(21538174-21538377)
chr4 (160-305)||(37021933-37022077)
chr4 (284-404)||(26792265-26792385)
chr4 (284-402)||(41800958-41801076)
chr4 (283-404)||(31242148-31242269)
chr4 (289-402)||(41793265-41793377)
chr4 (1-197)||(46436410-46436605)
chr4 (284-404)||(54634036-54634156)
chr4 (289-403)||(55799589-55799700)
chr4 (284-403)||(52529146-52529265)
chr4 (284-402)||(30726762-30726880)
chr4 (260-402)||(49090381-49090522)
chr4 (1-197)||(11083728-11083923)
chr4 (289-398)||(6175785-6175890)
chr4 (286-402)||(13182121-13182237)
chr4 (286-402)||(31421640-31421756)
chr4 (284-402)||(3408261-3408379)
chr4 (284-402)||(37563301-37563419)
chr4 (309-403)||(40352299-40352393)
chr4 (300-401)||(1309151-1309252)
chr4 (286-403)||(6181814-6181931)
chr4 (260-404)||(49164995-49165137)
chr4 (286-402)||(13173168-13173284)
chr4 (284-403)||(21022909-21023027)
chr4 (286-403)||(9893287-9893404)
chr4 (1-165)||(10753149-10753312)
chr4 (1-165)||(10966918-10967081)
chr4 (1-197)||(14315540-14315735)
chr4 (1-84)||(4720080-4720163)
chr4 (284-404)||(14201551-14201667)
chr4 (284-375)||(16473701-16473791)
chr4 (284-402)||(26932518-26932636)
chr4 (284-393)||(49566470-49566580)
chr4 (1-86)||(14297401-14297486)
chr4 (279-372)||(44795024-44795116)
chr4 (284-402)||(46253421-46253535)
chr4 (284-402)||(55587293-55587407)
chr4 (284-402)||(55588308-55588422)
chr4 (284-405)||(23221691-23221808)
chr4 (284-368)||(28235582-28235665)
chr4 (284-372)||(39773368-39773456)
chr4 (284-404)||(51037489-51037608)
chr4 (352-402)||(39773630-39773680)
chr4 (284-405)||(23220610-23220730)
chr4 (357-403)||(7484664-7484710)
chr4 (356-402)||(29307554-29307600)
chr4 (284-402)||(40833631-40833748)
chr4 (284-402)||(38368166-38368280)
chr4 (356-405)||(40832578-40832627)
chr4 (284-404)||(38369203-38369322)
chr4 (545-589)||(46363884-46363927)
chr4 (270-301)||(31425299-31425330)
chr4 (29-195)||(41933363-41933527)
chr4 (270-301)||(49169078-49169109)
chr4 (332-402)||(7485729-7485799)
chr4 (356-402)||(26933358-26933404)
chr4 (169-229)||(40354706-40354768)
chr4 (284-326)||(41793374-41793416)
chr4 (169-226)||(6178252-6178309)
chr4 (260-305)||(6181762-6181807)
chr4 (350-403)||(37394181-37394234)
chr4 (169-226)||(41795498-41795555)
chr4 (260-301)||(41800908-41800949)
chr4 (169-226)||(49093958-49094015)
chr4 (106-138)||(1308563-1308595)
chr4 (356-404)||(21015672-21015720)
chr4 (350-402)||(56138181-56138233)
chr4 (284-372)||(56565722-56565809)
[»] chr3 (94 HSPs)
chr3 (1-301)||(3501604-3501907)
chr3 (1-301)||(50963019-50963315)
chr3 (1-402)||(3975666-3976067)
chr3 (1-303)||(596817-597119)
chr3 (1-303)||(50216590-50216894)
chr3 (1-301)||(4008035-4008335)
chr3 (1-301)||(42165224-42165523)
chr3 (1-267)||(47073919-47074187)
chr3 (1-229)||(49196159-49196387)
chr3 (1-226)||(42756289-42756514)
chr3 (1-229)||(20917729-20917956)
chr3 (1-229)||(20926691-20926918)
chr3 (1-229)||(51807102-51807330)
chr3 (1-226)||(30255714-30255939)
chr3 (1-196)||(44229881-44230074)
chr3 (1-226)||(48888872-48889104)
chr3 (279-404)||(9426563-9426688)
chr3 (284-402)||(3501916-3502034)
chr3 (284-405)||(46697642-46697763)
chr3 (8-210)||(48563094-48563297)
chr3 (288-402)||(1835352-1835463)
chr3 (279-402)||(2857972-2858095)
chr3 (284-402)||(41844083-41844201)
chr3 (284-403)||(35743603-35743720)
chr3 (284-403)||(3953236-3953355)
chr3 (284-404)||(50477112-50477232)
chr3 (284-403)||(8156441-8156560)
chr3 (284-398)||(6745347-6745461)
chr3 (284-403)||(2967946-2968065)
chr3 (284-402)||(49144477-49144595)
chr3 (284-398)||(30943127-30943241)
chr3 (284-398)||(54392049-54392163)
chr3 (260-403)||(29008819-29008962)
chr3 (289-403)||(2950266-2950379)
chr3 (289-403)||(46406651-46406764)
chr3 (289-403)||(49138514-49138627)
chr3 (289-402)||(34051373-34051485)
chr3 (289-403)||(42900110-42900224)
chr3 (257-402)||(1835084-1835229)
chr3 (300-404)||(16444540-16444644)
chr3 (322-402)||(25191855-25191935)
chr3 (286-402)||(42904205-42904321)
chr3 (286-402)||(50481406-50481522)
chr3 (260-402)||(34045342-34045484)
chr3 (255-404)||(35743350-35743500)
chr3 (284-402)||(41844385-41844503)
chr3 (156-229)||(42807498-42807571)
chr3 (284-401)||(1293312-1293429)
chr3 (284-393)||(2645399-2645508)
chr3 (286-405)||(46702048-46702167)
chr3 (300-402)||(46388892-46388994)
chr3 (284-404)||(27739588-27739707)
chr3 (284-375)||(8475788-8475878)
chr3 (1-89)||(42805974-42806054)
chr3 (292-402)||(3493523-3493633)
chr3 (292-402)||(3497217-3497327)
chr3 (285-393)||(30947675-30947784)
chr3 (169-229)||(2647830-2647890)
chr3 (284-404)||(11249545-11249664)
chr3 (284-404)||(28817022-28817141)
chr3 (284-372)||(42165128-42165215)
chr3 (284-404)||(50998701-50998820)
chr3 (284-404)||(11095108-11095224)
chr3 (1-84)||(31045305-31045388)
chr3 (288-402)||(4008348-4008461)
chr3 (288-393)||(8160994-8161100)
chr3 (284-402)||(34543157-34543274)
chr3 (285-393)||(3948671-3948780)
chr3 (317-402)||(19988394-19988479)
chr3 (286-402)||(54386067-54386184)
chr3 (284-372)||(4015150-4015237)
chr3 (284-375)||(42166431-42166521)
chr3 (284-402)||(4002675-4002792)
chr3 (284-402)||(12897759-12897876)
chr3 (343-407)||(2266960-2267024)
chr3 (284-372)||(4331841-4331928)
chr3 (289-349)||(16611088-16611147)
chr3 (289-349)||(22048106-22048165)
chr3 (284-339)||(2950363-2950418)
chr3 (284-339)||(46406612-46406667)
chr3 (270-301)||(46697772-46697803)
chr3 (284-339)||(49138611-49138666)
chr3 (356-402)||(11248492-11248538)
chr3 (332-402)||(16851061-16851131)
chr3 (284-326)||(34051334-34051376)
chr3 (260-301)||(2967896-2967937)
chr3 (357-402)||(12898780-12898825)
chr3 (169-226)||(34048954-34049011)
chr3 (260-305)||(46389015-46389060)
chr3 (169-226)||(46402256-46402313)
chr3 (260-305)||(46701996-46702041)
chr3 (169-226)||(49140989-49141046)
chr3 (260-301)||(49144427-49144468)
chr3 (169-226)||(54389677-54389734)
[»] chr7 (75 HSPs)
chr7 (1-251)||(17835188-17835437)
chr7 (1-301)||(34738425-34738727)
chr7 (1-303)||(27453331-27453634)
chr7 (1-301)||(15073940-15074240)
chr7 (1-301)||(42507739-42508039)
chr7 (1-229)||(39460661-39460889)
chr7 (1-215)||(10517128-10517341)
chr7 (1-299)||(47776395-47776695)
chr7 (1-226)||(37340440-37340665)
chr7 (1-225)||(36977733-36977959)
chr7 (1-208)||(47672797-47673004)
chr7 (284-402)||(603713-603831)
chr7 (284-402)||(10097850-10097968)
chr7 (1-210)||(9494507-9494727)
chr7 (284-402)||(41884147-41884265)
chr7 (283-398)||(43619643-43619758)
chr7 (284-398)||(45767882-45767995)
chr7 (289-402)||(48407347-48407460)
chr7 (284-402)||(20564007-20564125)
chr7 (284-402)||(35606723-35606841)
chr7 (260-403)||(41880447-41880590)
chr7 (289-403)||(10098266-10098379)
chr7 (289-402)||(16636268-16636381)
chr7 (289-402)||(17459257-17459370)
chr7 (289-402)||(17593844-17593957)
chr7 (284-402)||(7975630-7975748)
chr7 (284-402)||(15074249-15074367)
chr7 (284-398)||(30791029-30791143)
chr7 (289-398)||(9365584-9365692)
chr7 (289-402)||(20566386-20566498)
chr7 (284-404)||(42508048-42508168)
chr7 (284-403)||(40141247-40141366)
chr7 (284-404)||(10098138-10098258)
chr7 (286-404)||(17465736-17465854)
chr7 (286-404)||(17587360-17587478)
chr7 (284-402)||(18105307-18105425)
chr7 (286-398)||(48403310-48403422)
chr7 (1-223)||(17741170-17741391)
chr7 (284-402)||(7004-7121)
chr7 (318-408)||(35610470-35610560)
chr7 (284-402)||(18109795-18109913)
chr7 (284-402)||(46907474-46907588)
chr7 (284-372)||(17834452-17834539)
chr7 (284-404)||(27656971-27657090)
chr7 (279-391)||(40928943-40929055)
chr7 (284-403)||(8068-8186)
chr7 (291-402)||(13921292-13921402)
chr7 (284-402)||(10524378-10524495)
chr7 (284-402)||(12210611-12210728)
chr7 (169-229)||(15070608-15070668)
chr7 (286-404)||(9371410-9371529)
chr7 (334-404)||(28564605-28564675)
chr7 (284-399)||(49140594-49140705)
chr7 (286-403)||(10168281-10168398)
chr7 (286-403)||(10175806-10175923)
chr7 (284-402)||(49141642-49141756)
chr7 (1-85)||(14689770-14689854)
chr7 (278-402)||(46908488-46908611)
chr7 (332-403)||(42583128-42583199)
chr7 (285-403)||(45763312-45763431)
chr7 (284-407)||(42582045-42582164)
chr7 (285-393)||(43624167-43624276)
chr7 (286-402)||(19804512-19804627)
chr7 (294-393)||(30786489-30786589)
chr7 (284-339)||(9365676-9365731)
chr7 (284-339)||(10098363-10098418)
chr7 (270-301)||(35606850-35606881)
chr7 (270-301)||(41884107-41884138)
chr7 (356-403)||(42795172-42795219)
chr7 (350-404)||(43686935-43686989)
chr7 (332-402)||(45258072-45258142)
chr7 (169-226)||(9367858-9367915)
chr7 (260-305)||(17465684-17465729)
chr7 (260-305)||(17587485-17587530)
chr7 (285-326)||(43032984-43033025)
[»] scaffold0293 (2 HSPs)
scaffold0293 (1-301)||(440-734)
scaffold0293 (284-399)||(743-858)
[»] scaffold0101 (4 HSPs)
scaffold0101 (1-261)||(40747-41007)
scaffold0101 (287-404)||(41080-41197)
scaffold0101 (284-339)||(41043-41098)
scaffold0101 (169-229)||(36678-36738)
[»] scaffold0180 (2 HSPs)
scaffold0180 (1-229)||(15335-15562)
scaffold0180 (284-403)||(15643-15761)
[»] scaffold0184 (1 HSPs)
scaffold0184 (105-301)||(18111-18305)
[»] scaffold0078 (1 HSPs)
scaffold0078 (105-301)||(54539-54733)
[»] chr6 (39 HSPs)
chr6 (1-201)||(31768861-31769066)
chr6 (1-227)||(24088494-24088722)
chr6 (270-403)||(30825983-30826116)
chr6 (284-400)||(26712244-26712360)
chr6 (283-398)||(1608256-1608371)
chr6 (284-403)||(27616648-27616767)
chr6 (1-89)||(6320275-6320363)
chr6 (284-402)||(18351664-18351782)
chr6 (132-226)||(6320371-6320465)
chr6 (289-402)||(27641778-27641890)
chr6 (289-403)||(11694087-11694200)
chr6 (289-402)||(6207120-6207232)
chr6 (289-402)||(32691085-32691198)
chr6 (284-402)||(13382563-13382681)
chr6 (284-402)||(17597545-17597663)
chr6 (318-398)||(30829706-30829786)
chr6 (284-403)||(2109451-2109569)
chr6 (284-402)||(28249819-28249937)
chr6 (1-53)||(30424146-30424198)
chr6 (284-404)||(13164281-13164397)
chr6 (284-403)||(26711982-26712100)
chr6 (332-402)||(11688048-11688118)
chr6 (284-375)||(26349937-26350026)
chr6 (343-402)||(6760951-6761010)
chr6 (169-224)||(22304977-22305032)
chr6 (1-82)||(29821740-29821821)
chr6 (284-404)||(25554638-25554757)
chr6 (284-372)||(26351117-26351204)
chr6 (284-339)||(6207081-6207136)
chr6 (284-339)||(32691182-32691237)
chr6 (4-197)||(3380939-3381131)
chr6 (343-401)||(8707917-8707975)
chr6 (284-402)||(15888821-15888937)
chr6 (147-205)||(21600751-21600809)
chr6 (169-226)||(6204701-6204758)
chr6 (260-305)||(11688171-11688216)
chr6 (169-226)||(11691668-11691725)
chr6 (260-301)||(27616776-27616817)
chr6 (260-305)||(30829622-30829667)
[»] scaffold0155 (1 HSPs)
scaffold0155 (1-205)||(8361-8564)
[»] scaffold0744 (1 HSPs)
scaffold0744 (284-404)||(444-563)
[»] scaffold0014 (2 HSPs)
scaffold0014 (289-404)||(84479-84593)
scaffold0014 (284-339)||(84577-84632)
[»] scaffold1606 (1 HSPs)
scaffold1606 (311-402)||(9-100)
[»] scaffold0494 (2 HSPs)
scaffold0494 (286-404)||(11476-11594)
scaffold0494 (284-340)||(5327-5383)
[»] scaffold0199 (1 HSPs)
scaffold0199 (287-402)||(10587-10701)
[»] scaffold0038 (1 HSPs)
scaffold0038 (284-402)||(49981-50099)
[»] scaffold0011 (1 HSPs)
scaffold0011 (284-372)||(236281-236368)
[»] scaffold0016 (2 HSPs)
scaffold0016 (317-402)||(69274-69359)
scaffold0016 (356-404)||(68347-68395)
[»] scaffold0007 (1 HSPs)
scaffold0007 (1-53)||(251187-251239)
[»] scaffold0094 (1 HSPs)
scaffold0094 (343-402)||(237-296)
[»] scaffold0504 (1 HSPs)
scaffold0504 (284-374)||(12345-12434)


Alignment Details
Target: chr2 (Bit Score: 275; Significance: 1e-153; HSPs: 75)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 4 - 402
Target Start/End: Complemental strand, 21998548 - 21998148
Alignment:
Q  4 attcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaaaaa 103  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||         |||||    
T  21998548 attcaattatcaattactaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaatttttttaaaaaaa 21998449  T
Q  104 tcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggt 203  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  21998448 tcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtacaattgatttgcttgcaattcgtgaaaatggatttggt 21998349  T
Q  204 gaagatttgagagaaattgagaatttagaaag--ttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||| |||||||||||||||||||||| |  ||||||||||||||||||||||||||||||| |||| ||| |||||| ||||||||||||||||||    
T  21998348 gaagattggagagaaattgagaatttagaaggttttttttggaaatgggaggttctggttctgcgttctggttatgttcagttttcctcggcagttaact 21998249  T
Q  302 gccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattct 401  Q
    |||||| |||||||||||||||||| |||||||| ||||| |||||||  ||| |||||||||||||||||||||||| | |||||||||||||||||||    
T  21998248 gccgccggtttcctaaaaacttcggcagcaaactaccgaagggcatttgagtaatttactcgtgtggcacaaccaaactatatgtgggaacatcaattct 21998149  T
Q  402 c 402  Q
    |    
T  21998148 c 21998148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 28469002 - 28468702
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||         ||    
T  28469002 tacattcaattatcaatttctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaatttttttaaaa 28468903  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28468902 aaatcaacctaaacaaattaacattaacattcaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 28468803  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    |||||||||| |||||||||||||||||| | | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28468802 ggtgaagattggagagaaattgagaattttggaggttttttggaaatgggaggttctggttctgccatctgtttaagttcagatttcctcggcagttaac 28468703  T
Q  301 t 301  Q
    |    
T  28468702 t 28468702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 1 - 403
Target Start/End: Complemental strand, 45428952 - 45428549
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnn-a 99  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||          |    
T  45428952 tacattcaattatcaatttctaaactacacatgcaatcatcaaattgtcattttttaaatcaaccctaaccacatacaaactactctaatttttttttta 45428853  T
Q  100 aaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatt 199  Q
    ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45428852 aaaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatt 45428753  T
Q  200 tggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaa 299  Q
    ||| |||||||||||||||||||  || || ||||   ||||||||||| || |||||||||||||| |||| ||| || ||| |||| |||||||||||    
T  45428752 tggagaagatttgagagaaattgttaaatttgaaaaggttttggaaatgagaagttctggttctgcgttctggttatgtccagttttcttcggcagttaa 45428653  T
Q  300 ctgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaatt 399  Q
    |||||||| |||||||||||||||| | ||   ||| ||||| || |||| ||||||||||||||||| |||| ||| |  | ||||||||||| |||||    
T  45428652 ctgccgccggtttcctaaaaacttcagcagtttactaccgaagggtatttccgtattttactcgtgtgacacagccatattatatgtgggaacaacaatt 45428553  T
Q  400 ctca 403  Q
    ||||    
T  45428552 ctca 45428549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 206; E-Value: 1e-112
Query Start/End: Original strand, 1 - 372
Target Start/End: Complemental strand, 7185390 - 7185020
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnn-a 99  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||           |    
T  7185390 tacattcatttatcaattcctaaacaacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctattttttttttta 7185291  T
Q  100 aaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatt 199  Q
    ||||||||| ||||||||| |||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  7185290 aaaatcaacctaaacaaatcaacattaacattaaaattattgacacaacttacttgtgataatgcgcacttgatttgcttgcaattcgtgaaaatggatt 7185191  T
Q  200 tggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaa 299  Q
    ||||||||||| |||||||||||||||||| |||| | |||||||||||||| |||||||||||||||  || |||||| |||||||||||||||||| |    
T  7185190 tggtgaagattggagagaaattgagaattttgaaattgttttggaaatgggaagttctggttctgcga-atgattaagtccagatttcctcggcagttta 7185092  T
Q  300 ctgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcaca 372  Q
    ||| |||| |||| ||||||| ||||| ||  |||||||||| ||||||||| ||   ||||||| |||||||    
T  7185091 ctgtcgccggtttactaaaaa-ttcggcagttaactgccgaagggcattttcataaagtactcgtttggcaca 7185020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 177; E-Value: 4e-95
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 17420928 - 17420629
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||| | ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||         ||    
T  17420928 tacattcaatgatcaatttctaaactacacatgcaatcatcaaattctcaattttgaaatcaaccctaaccacatgcaaactactctaatttttctaaaa 17420829  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgc-aattcgtgaaaatggatt 199  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||   | |||  ||||||||||| ||||||    
T  17420828 aaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgaa--ggttgagaattcgtgaaa-tggatt 17420732  T
Q  200 tggt-gaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagtta 298  Q
    |||| | | ||  |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17420731 tggtaggaaatgggagagaaattgagaattttgaaggttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagtta 17420632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 145; E-Value: 5e-76
Query Start/End: Original strand, 106 - 301
Target Start/End: Original strand, 42505578 - 42505774
Alignment:
Q  106 aacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtga 205  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42505578 aacataaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtga 42505677  T
Q  206 agatttgagagaaattgagaatttagaaag-ttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaact 301  Q
    ||||| ||||||| |||| ||||| ||| | ||||||| ||||||||||||||||||||||| |||| ||| || ||||||||||||||||||||||    
T  42505678 agattggagagaatttgaaaattttgaatgtttttttgtaaatgggaggttctggttctgcgttctggttatgtccagatttcctcggcagttaact 42505774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 39947961 - 39947660
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa-nnnnnnnnna 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||          |    
T  39947961 tacattcatttatcaattcctaaactacacatgcaatcatcgaattgtcaattttaaaatcaaccctaaccacatacaaactactctaatttttttaaaa 39947862  T
Q  100 aaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatt 199  Q
    ||||||||| |||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||   ||||    
T  39947861 aaaatcaacctaaacatattaacattatgattaaaatgattgacacaacttacttgtgataatgtgccgttgatttgcttgcaattcgtgaaagaagatt 39947762  T
Q  200 tggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaa 299  Q
    ||||||||||| |||| || ||  |||||| |  |  |||| | ||||||||   |||||||||||| |||  || ||||||||||||||| ||||||||    
T  39947761 tggtgaagattggagaaaatttatgaattttgtgaagttttggaaaatgggaaagtctggttctgcgttctagtttagttcagatttcctctgcagttaa 39947662  T
Q  300 ct 301  Q
    ||    
T  39947661 ct 39947660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 45137144 - 45137372
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||         ||    
T  45137144 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccttaaccacatgcaaactactctaatttttttttaa 45137243  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| ||||| ||  |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||    
T  45137244 aaataaacctaaacaaactaacactatcattaaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaatttgtgaaaatggcttt 45137343  T
Q  201 ggtgaagatttgagagaaattgagaattt 229  Q
    |||||||||| ||||||||||| ||||||    
T  45137344 ggtgaagattggagagaaattgtgaattt 45137372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 297
Target Start/End: Original strand, 32956066 - 32956351
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa-nnnnnnnnna 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||          |    
T  32956066 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaacccaaaccacatacaaactactctaattttttttaaa 32956165  T
Q  100 aaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatt 199  Q
    ||||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||| |||||||||        
T  32956166 aaaatcaacctaaacaaattaacattaacattaaaatgattggcacaacttacttgtgataatgtgcagttgatttgcttgctatttgtgaaaatg---- 32956261  T
Q  200 tggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagtt 297  Q
           ||||  |||||||||  |||||| ||||   |||||||||||||| |||||||||||||||  || |||||| ||||||||||||||||||    
T  32956262 -------gattctagagaaattctgaattttgaaaaagttttggaaatgggaagttctggttctgcga-atgattaagtccagatttcctcggcagtt 32956351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 25965181 - 25964945
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactcta--------annn 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||        |       
T  25965181 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctattttttttattt 25965082  T
Q  93 nnnnnnaaaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaa 192  Q
           ||||| ||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  25965081 tttttttaaaataaacctaaacaaactaacattatgattaaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaa 25964982  T
Q  193 atggatttggtgaagatttgagagaaattgagaattt 229  Q
    |||| ||||||||||||| ||||||||||||||||||    
T  25964981 atggctttggtgaagattggagagaaattgagaattt 25964945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 270 - 402
Target Start/End: Original strand, 5355538 - 5355670
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggc 369  Q
    ||||||||||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  5355538 tgtttaagttcagatttactcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggc 5355637  T
Q  370 acaaccaaacaaaatgtgggaacatcaattctc 402  Q
    ||| |||||||| ||||||||||| ||||||||    
T  5355638 acagccaaacaacatgtgggaacagcaattctc 5355670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 44100819 - 44100938
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||||||| |||||||| |    
T  44100819 tttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggtattttcatattttactcgtgtggcacagccaaacaaca 44100918  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||||||||    
T  44100919 tgtgggaacaacaattctca 44100938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 18000284 - 18000165
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||| |||||||||||||||||||||||||||||| |    
T  18000284 tttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacaaccaaacaaca 18000185  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||| ||||    
T  18000184 tgtgggaacagcaatactca 18000165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 30493411 - 30493293
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||| |||||  || ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |    
T  30493411 tttcctcggcagttaactaccgccgattgcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaaga 30493312  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  30493311 tgtgggaacagcaattctc 30493293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 86; E-Value: 9e-41
Query Start/End: Original strand, 282 - 403
Target Start/End: Complemental strand, 17420622 - 17420501
Alignment:
Q  282 gatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaa 381  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||| || |    
T  17420622 gattttctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacagccatacta 17420523  T
Q  382 aatgtgggaacatcaattctca 403  Q
     ||||||||||| |||||||||    
T  17420522 tatgtgggaacagcaattctca 17420501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 41564513 - 41564632
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||| |    
T  41564513 tttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaaca 41564612  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||| ||||    
T  41564613 tgtgggaacaacaatactca 41564632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 283 - 403
Target Start/End: Complemental strand, 209063 - 208943
Alignment:
Q  283 atttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaa 382  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||     
T  209063 atttcctcggcagttaactaccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaac 208964  T
Q  383 atgtgggaacatcaattctca 403  Q
    ||||||||||| |||| ||||    
T  208963 atgtgggaacagcaatcctca 208943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 283 - 395
Target Start/End: Complemental strand, 10620052 - 10619940
Alignment:
Q  283 atttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaa 382  Q
    |||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| ||||||||     
T  10620052 atttcctcggcagttaactgccgccgatttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaac 10619953  T
Q  383 atgtgggaacatc 395  Q
    |||||||||||||    
T  10619952 atgtgggaacatc 10619940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 284 - 398
Target Start/End: Original strand, 5351753 - 5351867
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||| ||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||| |    
T  5351753 tttcctcggcagttaactaccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaaca 5351852  T
Q  384 tgtgggaacatcaat 398  Q
    |||||||||| ||||    
T  5351853 tgtgggaacagcaat 5351867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 7267465 - 7267583
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||| |||||||| |    
T  7267465 tttccttggcagttaactgccgccggttccctaaaaacttcggtagcaaactgccgatgagcattttcgtattttactcgtgtggcacagccaaacaaca 7267564  T
Q  384 tgtgggaacatcaattctc 402  Q
    ||||| |||| ||||||||    
T  7267565 tgtggaaacagcaattctc 7267583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 43536154 - 43536036
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||||||||||||| || | ||| |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||| |    
T  43536154 tttcctcggcagttaactgtcgtcggttgcctaaaaacttcggtagcaaactgtcgaacggcatttttgtattttactcgtgtggcacagccaaacaaga 43536055  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  43536054 tgtgggaacagcaattctc 43536036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 15835237 - 15835350
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||   |||||||  |||||||||||||||||||| |||||||| ||||||    
T  15835237 tcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaggagcattttgatattttactcgtgtggcacagccaaacaacatgtgg 15835336  T
Q  389 gaacatcaattctc 402  Q
    ||||| ||||||||    
T  15835337 gaacaacaattctc 15835350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 279 - 398
Target Start/End: Original strand, 38950543 - 38950661
Alignment:
Q  279 tcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaa 378  Q
    |||||||||||||||||||||||| |||| ||||||||||| || |||||||||||||||||| ||||||||||||||||||||||| | |||| |||||    
T  38950543 tcagatttcctcggcagttaactgtcgccggtttcctaaaacct-cggtagcaaactgccgaagggcattttcgtattttactcgtgcgacacagccaaa 38950641  T
Q  379 caaaatgtgggaacatcaat 398  Q
    ||| ||||||||||| ||||    
T  38950642 caacatgtgggaacaacaat 38950661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 42499799 - 42499685
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| ||| ||||||||| |||||||||||||||| || |||||||| ||||||||||||||||||||| |||||| | ||||||    
T  42499799 tcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccaaagggcattttggtattttactcgtgtggcacagccaaactatatgtgg 42499701  T
Q  389 gaacatcaattctcaa 404  Q
    ||||| ||||||||||    
T  42499700 gaacagcaattctcaa 42499685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 283 - 404
Target Start/End: Original strand, 43619162 - 43619283
Alignment:
Q  283 atttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaa 382  Q
    ||||||||||||||||||||||||| |||| ||||||||||||| ||  |||||||||| |||||||   || ||||||||||||||||| |||||| ||    
T  43619162 atttcctcggcagttaactgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttgattaatttactcgtgtggcacagccaaaccaa 43619261  T
Q  383 atgtgggaacatcaattctcaa 404  Q
    ||||||||||| ||||||||||    
T  43619262 atgtgggaacagcaattctcaa 43619283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 398
Target Start/End: Complemental strand, 3935876 - 3935768
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| | |||||| ||||||||||||||||||||| |||||| | ||||||    
T  3935876 tcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaaggacattttggtattttactcgtgtggcacagccaaactatatgtgg 3935778  T
Q  389 gaacatcaat 398  Q
    ||||| ||||    
T  3935777 gaacagcaat 3935768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 22003422 - 22003537
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||   ||| ||||| |||||||  ||| ||||||||||||||||| |||||| |||    
T  22003422 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaa 22003521  T
Q  384 tgtgggaacatcaatt 399  Q
    |||||||||| |||||    
T  22003522 tgtgggaacagcaatt 22003537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 17426425 - 17426537
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| ||| ||||||||| || |||||||||||||||  | |||||| ||||||||||||||||||||| |||||| | ||||||    
T  17426425 tcggcagttaactgccgccggtt-cctaaaaacctcagtagcaaactgccgagggacatttttgtattttactcgtgtggcacagccaaactatatgtgg 17426523  T
Q  389 gaacatcaattctc 402  Q
    ||||| ||||||||    
T  17426524 gaacaacaattctc 17426537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 286 - 403
Target Start/End: Complemental strand, 20937948 - 20937831
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||| | |||||||| |||| ||||||||||||| ||  |||||||||| |||||||  ||| ||||||||||||||||| |||||| |||||    
T  20937948 tcctcggtagtaagctgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttaggtaatttactcgtgtggcacagccaaaccaaatg 20937849  T
Q  386 tgggaacatcaattctca 403  Q
    |||||||| |||||||||    
T  20937848 tgggaacaacaattctca 20937831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 286 - 405
Target Start/End: Complemental strand, 15831177 - 15831058
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||| | |||||||| |||  ||| ||||||||||||  |||||||||| || ||||||||||||||||||||||||||| ||| || | |||    
T  15831177 tcctcggtagtaagctgccgccggttcactacaaacttcggtagttaactgccgaagggaattttcgtattttactcgtgtggcacagccatactatatg 15831078  T
Q  386 tgggaacatcaattctcaac 405  Q
    |||||||| |||||||||||    
T  15831077 tgggaacaacaattctcaac 15831058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 285 - 402
Target Start/End: Complemental strand, 43312783 - 43312666
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaat 384  Q
    ||||||||||||||||||||||  |||| ||||||||||||| ||   ||||||||| ||||||||||||   || |||||||| ||| |||||| ||||    
T  43312783 ttcctcggcagttaactgccgctggtttactaaaaacttcggcagtttactgccgaagggcattttcgtaaaatattcgtgtggtacagccaaaccaaat 43312684  T
Q  385 gtgggaacatcaattctc 402  Q
    ||||||||| ||||||||    
T  43312683 gtgggaacaacaattctc 43312666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 284 - 404
Target Start/End: Complemental strand, 28468693 - 28468573
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||||| | ||||||||| ||   |||  |||| || |||| |||||||||||||||||||||| |||||| | |    
T  28468693 tttcctcggcagttaactgccgccggtttccaacaaacttcggcagtttactatcgaagggtatttgcgtattttactcgtgtggcacagccaaactata 28468594  T
Q  384 tgtgggaacatcaattctcaa 404  Q
     ||||||||| ||||||||||    
T  28468593 cgtgggaacaacaattctcaa 28468573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 296 - 398
Target Start/End: Original strand, 43984368 - 43984469
Alignment:
Q  296 ttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatc 395  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||  | |||||| ||||||||||| ||||||||| |||||| | ||||||||||| |    
T  43984368 ttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgagggacattttggtattttactcatgtggcacagccaaactatatgtgggaacagc 43984466  T
Q  396 aat 398  Q
    |||    
T  43984467 aat 43984469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 285 - 402
Target Start/End: Complemental strand, 26543355 - 26543238
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaat 384  Q
    ||||| ||||||||||||||||| |||| ||||||||||||  ||   | ||||||| | ||||||||||   ||||||||||||||| |||||| ||||    
T  26543355 ttccttggcagttaactgccgccggtttactaaaaacttcgacagtttagtgccgaaggacattttcgtaaagtactcgtgtggcacagccaaaccaaat 26543256  T
Q  385 gtgggaacatcaattctc 402  Q
    ||||||||| ||||||||    
T  26543255 gtgggaacaacaattctc 26543238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 286 - 402
Target Start/End: Original strand, 30496972 - 30497088
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||  |||||||| |||  || |||||||||| ||  |||||||||| |||||||| ||||||||||||||||||||| ||| || | |||    
T  30496972 tcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatg 30497071  T
Q  386 tgggaacatcaattctc 402  Q
    |||||||| ||||||||    
T  30497072 tgggaacaacaattctc 30497088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 29074031 - 29074141
Alignment:
Q  291 ggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtggga 390  Q
    ||||||||||||||||  | || |||||| |||||| ||  |||||||||  |||||||  ||| |||||||||||||||||||||||| ||||||||||    
T  29074031 ggcagttaactgccgctggatttctaaaa-cttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacaaccaaaccaaatgtggga 29074129  T
Q  391 acatcaattctc 402  Q
    ||| ||||||||    
T  29074130 acaacaattctc 29074141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 286 - 404
Target Start/End: Complemental strand, 39794013 - 39793895
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||  |||||||| ||||  | |||||||||| ||  |||||||||| ||||||||  |||||||||||||||||||| ||| || | |||    
T  39794013 tcctcggtagtttgctgccgccggtttaatcaaaacttcggcagttaactgccgaagggcattttgatattttactcgtgtggcacagccatactatatg 39793914  T
Q  386 tgggaacatcaattctcaa 404  Q
    |||||||| ||||||||||    
T  39793913 tgggaacagcaattctcaa 39793895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 402
Target Start/End: Original strand, 42505799 - 42505901
Alignment:
Q  300 ctgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaatt 399  Q
    |||||||| |||| || |||||||||| ||  |||||||||| || ||||| ||||||||||||||||||||| ||| || | ||||||||||| |||||    
T  42505799 ctgccgccggtttactcaaaacttcggcagttaactgccgaagggtattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaatt 42505898  T
Q  400 ctc 402  Q
    |||    
T  42505899 ctc 42505901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 294 - 407
Target Start/End: Complemental strand, 44100744 - 44100631
Alignment:
Q  294 agttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaaca 393  Q
    |||||||||||||| |||||||||||||||||| ||   ||| ||||| ||||||| ||||  |||||| ||||||||| ||| || | ||||| |||||    
T  44100744 agttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcatgtggcacagccataccatatgtgagaaca 44100645  T
Q  394 tcaattctcaacaa 407  Q
     |||||||||||||    
T  44100644 gcaattctcaacaa 44100631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 286 - 402
Target Start/End: Original strand, 39800675 - 39800791
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||  |||||||| ||||  | |||||||||| ||  |||||||||| ||||||||  |||||||||||||||||||| ||| || | |||    
T  39800675 tcctcggtagtttgctgccgccggtttaatcaaaacttcggcagttaactgccgaagggcattttgatattttactcgtgtggcacagccatactatatg 39800774  T
Q  386 tgggaacatcaattctc 402  Q
    |||||||| ||||||||    
T  39800775 tgggaacagcaattctc 39800791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 39947651 - 39947533
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||| |||||| |||||  ||   ||| ||||| || |||||||||   ||||||||||||||| | |||| |||    
T  39947651 tttcctcggcagttaactgccgccggtttactaaaa-cttcgacagtttactaccgaagggtattttcgtaaagtactcgtgtggcacagcaaaaccaaa 39947553  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||||||||    
T  39947552 tgtgggaacaacaattctca 39947533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 317 - 407
Target Start/End: Original strand, 3940783 - 3940873
Alignment:
Q  317 aaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaacaa 407  Q
    |||||||||| ||  |||||||||| |||||||| ||||||||||||||||||||| ||| || | ||||||||||| |||| ||| ||||    
T  3940783 aaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaatactcgacaa 3940873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 300 - 398
Target Start/End: Complemental strand, 43978572 - 43978474
Alignment:
Q  300 ctgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaat 398  Q
    |||||||| |||  || |||||||||| ||  |||||||||| |||||||| ||||||||||||||||||||| ||| || | ||||||||||| ||||    
T  43978572 ctgccgccggttcactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaat 43978474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 407
Target Start/End: Complemental strand, 10424891 - 10424769
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||  |||   || |||||| |||||| ||  |||||| ||  |||||||  ||| ||||||||||||||||| |||||| |||    
T  10424891 tttcctcggcagttaactgtagccgtatttctaaaa-cttcggcagttaactgctgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaa 10424793  T
Q  384 tgtgggaacatcaattctcaacaa 407  Q
    |||||||||| |||||||| ||||    
T  10424792 tgtgggaacagcaattctcgacaa 10424769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 30803039 - 30803153
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||| ||  |||||||||  | |||||  ||| ||||||||||||||||| |||||| |||    
T  30803039 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcacagccaaaccaaa 30803137  T
Q  384 tgtgggaacatcaatt 399  Q
    |||||||||| |||||    
T  30803138 tgtgggaacaacaatt 30803153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 356 - 402
Target Start/End: Complemental strand, 3086017 - 3085971
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||    
T  3086017 tttactcgtgtggcacaaccaaactaaatgtgggaacaacaattctc 3085971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 35464316 - 35464398
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaacta 83  Q
    ||||||||||||| ||||| |||||||||||||||||||||| | ||||||||   | || || ||||||||||| |||||||    
T  35464316 tacattcatttataaattcataaactacacatgcaatcatcagaatgtcaattcatacataaatcctaaccacatgcaaacta 35464398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 285 - 393
Target Start/End: Original strand, 213474 - 213583
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||| |||||||||||||| ||||||||||||| |||| ||  ||||||||| | || |||| ||||  ||||| |||||||||| ||| || | |    
T  213474 ttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactata 213573  T
Q  384 tgtgggaaca 393  Q
    ||||||||||    
T  213574 tgtgggaaca 213583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 286 - 402
Target Start/End: Complemental strand, 5352014 - 5351897
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaac-caaacaaaat 384  Q
    ||||||| ||||  |||||||| |||  || |||||||||| ||  |||||| ||| |||||||| ||||||||||||||||||||| | || || | ||    
T  5352014 tcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgcagaagggcattttggtattttactcgtgtggcacagcgcatactatat 5351915  T
Q  385 gtgggaacatcaattctc 402  Q
    ||||||||| ||||||||    
T  5351914 gtgggaacaacaattctc 5351897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 285 - 393
Target Start/End: Original strand, 10624487 - 10624596
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||| |||||||||||||| ||||||||||||| |||| ||  ||||||||| | || |||| ||||  ||||| |||||||||| ||| || | |    
T  10624487 ttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactata 10624586  T
Q  384 tgtgggaaca 393  Q
    ||||||||||    
T  10624587 tgtgggaaca 10624596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 372
Target Start/End: Original strand, 41273269 - 41273356
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcaca 372  Q
    ||||||||||||||||||||||||  ||| || |||||||||| ||  |||||||||| ||||||||| ||   |||||||||||||||    
T  41273269 tttcctcggcagttaactgccgccgatttact-aaaacttcggcagttaactgccgaagggcattttcataaagtactcgtgtggcaca 41273356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 4 - 83
Target Start/End: Complemental strand, 31367387 - 31367308
Alignment:
Q  4 attcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaacta 83  Q
    |||||||||| ||||| ||||||| | |||||||||||||| | ||||||   | ||||||||||||||||| |||||||    
T  31367387 attcatttataaattcataaactatatatgcaatcatcaaaatatcaattcctacatcaaccctaaccacatgcaaacta 31367308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 332 - 399
Target Start/End: Original strand, 43539806 - 43539873
Alignment:
Q  332 aactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaatt 399  Q
    |||||||||| | |||||||| |||||||| |||||||||||||| || | ||||||||||| |||||    
T  43539806 aactgccgaaggacattttcgcattttactggtgtggcacaaccatactatatgtgggaacaacaatt 43539873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 7189972 - 7190089
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| | || |||||| |||||| ||  |||||||||  ||||    |||| ||||||||||||||||||||  |   ||    
T  7189972 tttcctcggcagttaactgcagccggatttctaaaa-cttcggcagttaactgccgaggggcaaaaacgtaatttactcgtgtggcacaaccttatgtaa 7190070  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||||||||||||    
T  7190071 tgtgggaacatcaattctc 7190089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 28477088 - 28477205
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||| ||  ||||| |||  ||||||   ||| ||| |||||||||||||||||||| | |    
T  28477088 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgtcgaggggcattagagtaatttgctcgtgtggcacaaccaaactata 28477186  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  28477187 tgtgggaacaacaattctc 28477205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 36510877 - 36510994
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||| ||  |||||||||  || ||||  ||| |||||||||||| |||| |||||| |||    
T  36510877 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaggggtatttgagtaatttactcgtgtgacacagccaaaccaaa 36510975  T
Q  384 tgtgggaacatcaattctc 402  Q
     ||||||||| ||||||||    
T  36510976 agtgggaacaacaattctc 36510994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 285 - 393
Target Start/End: Original strand, 18003294 - 18003403
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||| |||||||||||||| ||||||||||||| |||| ||  ||||||||| | || |||| ||||  ||||| || ||||||| ||| || | |    
T  18003294 ttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtttggcacagccatactata 18003393  T
Q  384 tgtgggaaca 393  Q
    ||||||||||    
T  18003394 tgtgggaaca 18003403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 17426386 - 17426441
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccg 339  Q
    ||||||||||| |||||||||||| || ||||||||||||||| ||  ||||||||    
T  17426386 tttcctcggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccg 17426441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 301
Target Start/End: Complemental strand, 30493451 - 30493420
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||||||||||||||||||||||||||||    
T  30493451 tgtttaagttcagatttcctcggcagttaact 30493420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 403
Target Start/End: Complemental strand, 39033079 - 39033032
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctca 403  Q
    ||||||||||||| ||| |||||| ||||||||||||| |||||||||    
T  39033079 tttactcgtgtggtacagccaaaccaaatgtgggaacaacaattctca 39033032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 392
Target Start/End: Complemental strand, 39489203 - 39489128
Alignment:
Q  317 aaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaac 392  Q
    |||||||||| ||  |||||||||| || ||||  ||| ||||||||||||||||| |||||| ||| ||||||||    
T  39489203 aaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaac 39489128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 39951242 - 39951289
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctca 403  Q
    |||||||||||| |||| |||||| ||||||||||||| |||||||||    
T  39951242 tttactcgtgtgacacagccaaaccaaatgtgggaacagcaattctca 39951289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 42499838 - 42499783
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccg 339  Q
    ||||||||||| |||||||||||| || ||||||||||||||| ||  ||||||||    
T  42499838 tttcctcggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccg 42499783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 301
Target Start/End: Complemental strand, 43536194 - 43536163
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||||||||||||||||||||||||||||    
T  43536194 tgtttaagttcagatttcctcggcagttaact 43536163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 340
Target Start/End: Complemental strand, 39798497 - 39798439
Alignment:
Q  282 gatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga 340  Q
    |||||||||||||||||||||||||| ||| |||  ||||||||| ||  |||||||||    
T  39798497 gatttcctcggcagttaactgccgccggttgccttcaaacttcggcagttaactgccga 39798439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 3938051 - 3937994
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| |||||||||||||   || |||| ||||||||||||||| |||||||    
T  3938051 ttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaa 3937994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 3940700 - 3940745
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccg 305  Q
    ||||||| |||| ||| |||||| ||||||||||||||||||||||    
T  3940700 ttctgcgttctggttatgttcagttttcctcggcagttaactgccg 3940745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 15831229 - 15831184
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccg 305  Q
    ||||||| |||| ||| |||||| ||||||||||||||||||||||    
T  15831229 ttctgcgttctggttatgttcagttttcctcggcagttaactgccg 15831184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 17424006 - 17424063
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| |||||||||||||   || |||| ||||||||||||||| |||||||    
T  17424006 ttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaa 17424063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 20938000 - 20937955
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccg 305  Q
    ||||||| |||| ||| |||||| ||||||||||||||||||||||    
T  20938000 ttctgcgttctggttatgttcagttttcctcggcagttaactgccg 20937955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 86
Target Start/End: Original strand, 25515549 - 25515606
Alignment:
Q  29 acatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactc 86  Q
    |||||||||||||||| | ||||||   | ||||||||||||||||| ||||||||||    
T  25515549 acatgcaatcatcaaaatttcaattcctacatcaaccctaaccacatgcaaactactc 25515606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 43982073 - 43982130
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| |||||||||||||   || |||| ||||||||||||||| |||||||    
T  43982073 ttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaa 43982130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 43984322 - 43984363
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcg 325  Q
    ||||||||||| |||||||||||| || ||||||||||||||    
T  43984322 tttcctcggcacttaactgccgccggtgtcctaaaaacttcg 43984363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 402
Target Start/End: Complemental strand, 1149458 - 1149406
Alignment:
Q  350 tcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||||| |||||||||||||  |  ||||||||||||| ||||||||    
T  1149458 tcgtattttactagtgtggcacaaccttatcaaatgtgggaacaacaattctc 1149406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 317 - 389
Target Start/End: Complemental strand, 29947787 - 29947715
Alignment:
Q  317 aaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtggg 389  Q
    |||||||||| ||  |||||||||  |||||||  ||| ||||||||||| |||||||||||| ||| |||||    
T  29947787 aaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtagcacaaccaaaccaaacgtggg 29947715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 274; Significance: 1e-153; HSPs: 81)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 401
Target Start/End: Original strand, 15036440 - 15036840
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||         ||    
T  15036440 tacattcatttatcaattcctgaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaaccactctaatttttttaaaa 15036539  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15036540 aaataaacctaaacaaattaacattaacattaaaatgattgacacaacttatttgtgataatgtgcacttgatttgcttgcaattcgcgaaaatggattt 15036639  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15036640 ggtgaagattggagagaaattgagaatttagaaagttttttgaaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 15036739  T
Q  301 tgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattc 400  Q
    ||||||| ||||||||||||||| || |    ||| ||||| ||||||| |||| ||||||||||||||||| |||||| |  |||||||||| ||||||    
T  15036740 tgccgccggtttcctaaaaactttggcaatttactaccgaagggcatttgcgtaatttactcgtgtggcacagccaaactatgtgtgggaacaacaattc 15036839  T
Q  401 t 401  Q
    |    
T  15036840 t 15036840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 264
Target Start/End: Complemental strand, 45064602 - 45064339
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||    
T  45064602 tacattcaattatcaatttctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaatttttttaaaa 45064503  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45064502 aaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 45064403  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctg 264  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  45064402 ggtgaagattggagagaaattgagaatttagaaggttttttggaaatgaaaggttctggttctg 45064339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 1 - 300
Target Start/End: Original strand, 41249785 - 41250083
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||         ||    
T  41249785 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatctaccctaaccacatgcaaactactctaatttttaaaaaa 41249884  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41249885 aaatcaacctaaacaaattaacattatcattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 41249984  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    |||||||||| ||||||||||| |||||| |||    |||||||||||||| ||||||||||||| |  || |||||| |||||||||||||||||||||    
T  41249985 ggtgaagattggagagaaattgtgaattttgaacaagttttggaaatgggaagttctggttctgc-aaatgattaagtccagatttcctcggcagttaac 41250083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 39602076 - 39601765
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||         ||    
T  39602076 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaatttaaaaaaaa 39601977  T
Q  101 aaa------------tcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgt 188  Q
    |||            ||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  39601976 aaaaaaaaaaaaaaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcagttgatttgcttgcaattcgt 39601877  T
Q  189 gaaaatggatttggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcc 288  Q
    ||||||| |||||| ||||||| |||||||||||||||||| |||| | |||||||||||||| |||||||||||||||  || |||||| |||||||||    
T  39601876 gaaaatgaatttggcgaagattggagagaaattgagaattttgaaattgttttggaaatgggaagttctggttctgcga-atgattaagtccagatttcc 39601778  T
Q  289 tcggcagttaact 301  Q
    |||||||||||||    
T  39601777 tcggcagttaact 39601765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 181; E-Value: 2e-97
Query Start/End: Original strand, 1 - 393
Target Start/End: Complemental strand, 43211866 - 43211475
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||         ||    
T  43211866 tacattcatttatcaattcctaaactacacatgcaatcatcgaattgtcaattttaaaatcaaccctaagcacatacaaactactctaattttttaa-aa 43211768  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    ||||||||  ||||||||||||||||  ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||   |||||    
T  43211767 aaatcaaccaaaacaaattaacattatgattaaaatgattgacacaacttacttgtggtaatgtgcagttgatttgcttgcaattcgtgaaagaagattt 43211668  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    |||||||||| |||| || ||| |||||| |  |  ||||   |||||||    ||||||||| || |||| || |||||||||||||||||||||||||    
T  43211667 ggtgaagattggagaaaatttgtgaattttgtgaagttttgaaaaatggggaagtctggttctacgttctggtttagttcagatttcctcggcagttaac 43211568  T
Q  301 tgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaaca 393  Q
    ||||| | |||| ||||||| ||||| || ||||||||||| ||||||||||||   ||||||||||||||| || ||| |||||||||||||    
T  43211567 tgccgtcggtttactaaaaatttcggcagtaaactgccgaagggcattttcgtaaagtactcgtgtggcacagccgaaccaaatgtgggaaca 43211475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 39938928 - 39939227
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||||||||||| ||||| |||||||||||| |||||||| |||||||||||||||||||  ||||||||||||         ||    
T  39938928 tacattcatttatcaattcctaaactatacatgtaatcatcaaattatcaattttaaaatcaaccctaaccacatgtaaactactctaattttttttaaa 39939027  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||    
T  39939028 aaatcaacctaaacaaattaacattatcattaaaatgattgacacaacttacttgtgataatgtgcaattgatttgctttcaattcgtgaaaatggactt 39939127  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    |||||||||| |||||||||||||||||| |||| | |||||||||||||| |||||||||||||||  || |||||| ||||||| || ||||||||||    
T  39939128 ggtgaagattggagagaaattgagaattttgaaattgttttggaaatgggaagttctggttctgcga-atgattaagtccagattttctaggcagttaac 39939226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 42485250 - 42485550
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||| |||||||||| ||         ||    
T  42485250 tacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc-aatttttttaaaa 42485348  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    || | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42485349 aacttaacataaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 42485448  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaag-ttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaa 299  Q
    |||||||||| ||||||| |||||||||| ||| | ||||||| ||||||||||||||||||||||| |||| ||| || ||||||||||||| ||||||    
T  42485449 ggtgaagattggagagaatttgagaattttgaatgtttttttgtaaatgggaggttctggttctgcgttctggttatgtccagatttcctcggtagttaa 42485548  T
Q  300 ct 301  Q
    ||    
T  42485549 ct 42485550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 489341 - 489641
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||| | ||||||||||||||||| || ||||||||||||      | || ||||||||||| |||||||||| ||         ||    
T  489341 tacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttgtaaaacctaaccacatgcaaactactc-aattttttttaaa 489439  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    || | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  489440 aatttaacataaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 489539  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaag-ttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaa 299  Q
    |||||||||  ||||||| |||| ||||| ||| | ||||||| ||||||||||||||||||||||| |||| ||| || ||||||||||||||||||||    
T  489540 ggtgaagatcggagagaatttgaaaattttgaatgtttttttgtaaatgggaggttctggttctgcgttctggttatgtccagatttcctcggcagttaa 489639  T
Q  300 ct 301  Q
    ||    
T  489640 ct 489641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 367
Target Start/End: Complemental strand, 39252372 - 39252021
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnn-- 98  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||               
T  39252372 tacattcatttattaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaacc-taaccacatacaaactactctaattttttttttt 39252274  T
Q  99 -aaaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatgga 197  Q
     |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |    
T  39252273 taaaaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataacgcgcacttgatttgcttgcaattcgtgaaaatgaa 39252174  T
Q  198 tttggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagtt 297  Q
    ||||||||||||| |||||||||||               |||||||||||||| | |||||||||||||  || |||||| || |||||||||||||||    
T  39252173 tttggtgaagattggagagaaattg---------------ttttggaaatgggaaggtctggttctgcga-atgattaagtccaaatttcctcggcagtt 39252090  T
Q  298 aactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtg 367  Q
    |||||||||| |||| || || ||||| | ||   ||||||||| ||||||||||||   ||||||||||    
T  39252089 aactgccgccggtttact-aatacttcagcagttgactgccgaagggcattttcgtaaagtactcgtgtg 39252021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 43188410 - 43188182
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||         ||    
T  43188410 tacattcatttattaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccataaccacatgcaaactactctaatttttttttaa 43188311  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| ||||||||  |||||||||||||| ||||||||||||||| ||| |||| |||||||||||||||||| ||||||||  |||    
T  43188310 aaataaacctaaacaaactaacattatcattaaaatgattgatacaacttacttgtgacaatatgcagttgatttgcttgcaattcttgaaaatgacttt 43188211  T
Q  201 ggtgaagatttgagagaaattgagaattt 229  Q
    |||||||||| ||||||||||||||||||    
T  43188210 ggtgaagattggagagaaattgagaattt 43188182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 302
Target Start/End: Original strand, 39846698 - 39847003
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnna- 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||          |     
T  39846698 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctattttttttttat 39846797  T
Q  100 --aaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatgga 197  Q
      ||||| ||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||     
T  39846798 aaaaaataaacctaaacaaactaacattatcattaaaatgattgatacaacttacttgtgataatgtgcaattggtttgcttgcaatttgtgaaaatggc 39846897  T
Q  198 tttggtgaagatttgagagaaattgagaatttagaaagttttttggaaatggga--ggttctggttctgcgatctgtttaagttcagatttcctcggcag 295  Q
    ||||||||||||| ||||||||||| |||||| | |    ||||| |||||| |  | || || || |||| | || |||||||||||||||||||||||    
T  39846898 tttggtgaagattggagagaaattgtgaattttggagaagttttgaaaatggtaatgtttttgtttttgcg-tatgattaagttcagatttcctcggcag 39846996  T
Q  296 ttaactg 302  Q
    |||||||    
T  39846997 ttaactg 39847003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 25864652 - 25864879
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||         ||    
T  25864652 tacattcatttatcaattcataa-ctacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaatatttttttaa 25864750  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| ||||||||  |||||||||||| | |||||||||||||||||||||| | |||||||| ||||||||||||||||||  |||    
T  25864751 aaataaacctaaacaaactaacattatcattaaaatgattaatacaacttacttgtgataatgtgtagttgatttgattgcaattcgtgaaaatgacttt 25864850  T
Q  201 ggtgaagatttgagagaaattgagaattt 229  Q
    |||||||||| ||||||||||||||||||    
T  25864851 ggtgaagattagagagaaattgagaattt 25864879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 40076962 - 40077171
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| ||||||||||||  ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||         ||    
T  40076962 tacattcatttatcaattcataaactacacatataatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaattttttttaaa 40077061  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| ||||||||  |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  40077062 aaataaacctaaacaaactaacattatcattaaaatgattgatacaacttacttctgataatgtgcacttgatttgcttgcaattcgtgaaaatggcttt 40077161  T
Q  201 ggtgaagatt 210  Q
    | ||||||||    
T  40077162 gttgaagatt 40077171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 34822729 - 34822960
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa-nnnnnnnnna 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||          |    
T  34822729 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaatttttttttaa 34822828  T
Q  100 aaaatcaacataaacaaattaacattaatattaaaatgattgacacaact--tacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatgga 197  Q
    ||||| ||| |||||||| ||||||||  |||||||||||||| ||||||  |||||||||||||||||| || ||||||||||||||||||||||  |     
T  34822829 aaaataaacctaaacaaactaacattatcattaaaatgattgatacaacttatacttgtgataatgtgcagttaatttgcttgcaattcgtgaaaaaagt 34822928  T
Q  198 tttggtgaagatttgagagaaattgagaattt 229  Q
    ||||||||||||| ||||||||||||||||||    
T  34822929 tttggtgaagattggagagaaattgagaattt 34822960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 270 - 402
Target Start/End: Complemental strand, 21852 - 21720
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggc 369  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21852 tgtttaagttcagatttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaatggcattttcgtattttactcgtgtggc 21753  T
Q  370 acaaccaaacaaaatgtgggaacatcaattctc 402  Q
    ||| |||||||| ||||||||||| ||||||||    
T  21752 acagccaaacaagatgtgggaacaacaattctc 21720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 284 - 404
Target Start/End: Complemental strand, 22014298 - 22014178
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |    
T  22014298 tttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaaca 22014199  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  22014198 tgtgggaacagcaattctcaa 22014178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 26663054 - 26663172
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| ||||||||||    
T  26663054 tttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgctgaaagacattttcgtattttactcgtgtggcacagccaaacaaaa 26663153  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||| | ||||||||    
T  26663154 tgtgggaatagcaattctc 26663172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 100 - 301
Target Start/End: Complemental strand, 35026749 - 35026548
Alignment:
Q  100 aaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatt 199  Q
    ||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||| |||    
T  35026749 aaaatcaacctaaacaaattaacattatcattaaaatgattgacacaacttacttgtgataatgtgtagttaatttgcttgcaattcgtgaaaatgaatt 35026650  T
Q  200 tggtgaagatttgagagaaattgagaatttagaaagttttttggaaat-gggaggttctggttctgcgatctgtttaagttcagatttcctcggcagtta 298  Q
    |||||||||||  |||||||||  |||||| |||  | ||||| |||| |  |||||||||| |||| || || ||| ||||||||||| ||||| ||||    
T  35026649 tggtgaagattgtagagaaatttcgaattttgaagatgttttgaaaatagaaaggttctggtgctgc-atatgattatgttcagatttcatcggcggtta 35026551  T
Q  299 act 301  Q
    |||    
T  35026550 act 35026548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 290 - 403
Target Start/End: Complemental strand, 36677758 - 36677645
Alignment:
Q  290 cggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtggg 389  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||    
T  36677758 cggcagttaactgccgccggtttcctaaaaactttggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtggg 36677659  T
Q  390 aacatcaattctca 403  Q
    |||| |||||||||    
T  36677658 aacaacaattctca 36677645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 7344578 - 7344698
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||| |    
T  7344578 tttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaaca 7344677  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| |||| |||||    
T  7344678 tgtgggaacagcaatactcaa 7344698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 23018737 - 23018619
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |    
T  23018737 tttccttggcagttaactaccgccggttgcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaaga 23018638  T
Q  384 tgtgggaacatcaattctc 402  Q
    ||||| |||| ||||||||    
T  23018637 tgtggaaacagcaattctc 23018619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 1056222 - 1056340
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||  ||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||  ||||||| |    
T  1056222 tttcctcggcagttaactgccgctggttgcctaaaaacttcagtagcaaactgccgaagggcattttcgtattttactcgtgtgacacagtcaaacaaga 1056321  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  1056322 tgtgggaacaacaattctc 1056340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 288 - 398
Target Start/End: Original strand, 17924308 - 17924418
Alignment:
Q  288 ctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtg 387  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||| |||||    
T  17924308 ctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtg 17924407  T
Q  388 ggaacatcaat 398  Q
    |||||| ||||    
T  17924408 ggaacaacaat 17924418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 284 - 398
Target Start/End: Complemental strand, 32375703 - 32375589
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||| ||| || |||||  |||||||||||||||||||| |||||||| |    
T  32375703 tttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgctgaagggtattttgatattttactcgtgtggcacagccaaacaaca 32375604  T
Q  384 tgtgggaacatcaat 398  Q
    |||||||||| ||||    
T  32375603 tgtgggaacagcaat 32375589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 289 - 398
Target Start/End: Complemental strand, 483829 - 483721
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| | ||||||    
T  483829 tcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacaaccaaactatatgtgg 483731  T
Q  389 gaacatcaat 398  Q
    ||||| ||||    
T  483730 gaacaacaat 483721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 129 - 226
Target Start/End: Original strand, 5304010 - 5304107
Alignment:
Q  129 attaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| || |||| |||||||    
T  5304010 attaaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatggctttggtgaagattggaaagaatttgagaa 5304107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 284 - 386
Target Start/End: Complemental strand, 8419456 - 8419354
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |  ||||| ||||||||||||||||||||| |||||||| |    
T  8419456 tttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaaggatattttggtattttactcgtgtggcacagccaaacaaca 8419357  T
Q  384 tgt 386  Q
    |||    
T  8419356 tgt 8419354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 22519622 - 22519735
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    |||| |||||||||||||| ||| ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| | ||||||    
T  22519622 tcggtagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacaaccaaactatatgtgg 22519720  T
Q  389 gaacatcaattctca 403  Q
    |||||  ||||||||    
T  22519721 gaacagtaattctca 22519735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 15030936 - 15030818
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||   ||| ||||| |||||||  ||| ||||||||||||||||| |||||| |||    
T  15030936 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaa 15030837  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  15030836 tgtgggaacaacaattctc 15030818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 45066382 - 45066500
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||   ||| ||||| |||||||  ||| ||||||||||||||||| |||||| |||    
T  45066382 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaa 45066481  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  45066482 tgtgggaacaacaattctc 45066500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 5303933 - 5304007
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacat 75  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||||    
T  5303933 tacattcatttatcaattcataaactacacatgcaatcatgaaattgtcaattttaaaatcaaccctaaccacat 5304007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 24249844 - 24249759
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactc 86  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||   | ||||||||||||||||| ||||||||||    
T  24249844 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattcctatatcaaccctaaccacatgcaaactactc 24249759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 37327164 - 37327080
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactc 86  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||| ||||| ||||||||||    
T  37327164 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaattaaccctaa-cacatgcaaactactc 37327080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 184573 - 184693
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||   ||| ||||| ||||||| ||||  |||||||||||||||| ||| || | |    
T  184573 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccata 184672  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  184673 tgtgggaacagcaattctcaa 184693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 309 - 393
Target Start/End: Complemental strand, 17924128 - 17924044
Alignment:
Q  309 gtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaaca 393  Q
    ||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  17924128 gtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgggaaca 17924044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 36677950 - 36678070
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||   ||| ||||| ||||||| ||||  |||||||||||||||| ||| || | |    
T  36677950 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccata 36678049  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  36678050 tgtgggaacagcaattctcaa 36678070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 257 - 372
Target Start/End: Original strand, 22014429 - 22014544
Alignment:
Q  257 tggttctgcgatctgtttaagttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtatt 356  Q
    |||||||||| |||| ||| ||| || |||||||||||||||||||||||| |||||||||||||||||| ||   ||| ||||| ||||||| |||| |    
T  22014429 tggttctgcgttctggttatgttgagttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaat 22014528  T
Q  357 ttactcgtgtggcaca 372  Q
    ||||||||||||||||    
T  22014529 ttactcgtgtggcaca 22014544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 1052610 - 1052492
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||||||||| |||||||| |||  ||||||||||||| ||  |||| ||||| ||||||||||||||||||| |||||||||| ||| || | |    
T  1052610 tttcctcggcagttagctgccgccggttcactaaaaacttcggcagttaactaccgaagggcattttcgtattttactggtgtggcacatccatactata 1052511  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  1052510 tgtgggaacagcaattctc 1052492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 291 - 402
Target Start/End: Complemental strand, 2878629 - 2878518
Alignment:
Q  291 ggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtggga 390  Q
    |||||||||||| || | |||| |||||||||||||| ||||||||||||| |||||||| |||||||||||||||| |||| |||||||| | |  |||    
T  2878629 ggcagttaactgtcgtcggtttactaaaaacttcggtggcaaactgccgaagggcattttggtattttactcgtgtgacacagccaaacaacacgcagga 2878530  T
Q  391 acatcaattctc 402  Q
    ||| ||||||||    
T  2878529 acaacaattctc 2878518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 42481574 - 42481459
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtg 387  Q
    |||||| |||||||||||| ||||||||||||||||| ||||||||||| ||   ||||||||  |||||||||||||||||||| |||||||| | |||    
T  42481574 tcggcaattaactgccgccggtttcctaaaaacttcgatagcaaactgctgagggggcattttgatattttactcgtgtggcacagccaaacaacacgtg 42481475  T
Q  388 ggaacatcaattctca 403  Q
     ||||| |||||||||    
T  42481474 agaacagcaattctca 42481459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 2984457 - 2984395
Alignment:
Q  27 acacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa 89  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  2984457 acacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 2984395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 286 - 399
Target Start/End: Complemental strand, 26659504 - 26659391
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||| |||||||| |||  ||||||||||||| ||  |||||||||| ||||||||||||||||||| |||||||||| ||| || | |||    
T  26659504 tcctcggtagttagctgccgccggttcactaaaaacttcggcagttaactgccgaagggcattttcgtattttactggtgtggcacagccatactatatg 26659405  T
Q  386 tgggaacatcaatt 399  Q
    |||||||| |||||    
T  26659404 tgggaacagcaatt 26659391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 2335169 - 2335288
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||||||  |||||||||  |||||||  ||| ||||||||||||||||| |||||||| |    
T  2335169 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggtagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaacaaca 2335267  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  2335268 tgtgggaacaacaattctcaa 2335288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 23022308 - 23022428
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||| ||||| |||||||| |||  ||||||||||||  ||  |||||||||| |||||||||||||||||||  ||||||||| ||| || | |    
T  23022308 tttcctcggtagttagctgccgccggttcactaaaaacttcgacagttaactgccgaagggcattttcgtattttactgatgtggcacagccatactata 23022407  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  23022408 tgtgggaacaacaattctcaa 23022428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 335 - 402
Target Start/End: Complemental strand, 184376 - 184309
Alignment:
Q  335 tgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  184376 tgccgaagggcattttcgtattttactcgtgtggcacagccaaacaacatgtgggaacaacaattctc 184309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 27501652 - 27501535
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||||||  ||||||||| ||| ||||  ||| ||||||||||||||||| |||||| |||    
T  27501652 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggtagttaactgccgagaggtatttgagtaatttactcgtgtggcacagccaaaccaaa 27501554  T
Q  384 tgtgggaacatcaattctc 402  Q
     ||||||||| ||||||||    
T  27501553 agtgggaacagcaattctc 27501535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 332 - 404
Target Start/End: Original strand, 489695 - 489767
Alignment:
Q  332 aactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaa 404  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||| || | ||||||||||| ||||||||||    
T  489695 aactgccgaagggcattttagtattttactcgtgtggcacagccatactatatgtgggaacagcaattctcaa 489767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 28617620 - 28617502
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||| ||  |||||||||| || ||||  ||| ||||||||||||||||| |||||| |||    
T  28617620 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaa 28617522  T
Q  384 tgtgggaacatcaattctca 403  Q
     ||||||||| |||||||||    
T  28617521 agtgggaacagcaattctca 28617502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 317 - 402
Target Start/End: Original strand, 25588 - 25673
Alignment:
Q  317 aaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||| ||  |||||||||| ||||||||  |||||||||||||||||||| ||| || | ||||||||||| ||||||||    
T  25588 aaaacttcggcagttaactgccgaagggcattttgatattttactcgtgtggcacagccatactatatgtgggaacaacaattctc 25673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22495268 - 22495216
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaatt 53  Q
    ||||||||||||||||||| |||||||||||||||| ||||||| ||||||||    
T  22495268 tacattcatttatcaattcgtaaactacacatgcaaccatcaaaatgtcaatt 22495216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 286 - 398
Target Start/End: Complemental strand, 22510598 - 22510486
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||  |||||||| |||  || |||||||||| ||  |||||||||| |||||||| ||||||||||||||||||||| ||| || | |||    
T  22510598 tcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatg 22510499  T
Q  386 tgggaacatcaat 398  Q
    || ||||| ||||    
T  22510498 tgagaacagcaat 22510486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 21 - 65
Target Start/End: Complemental strand, 35026784 - 35026740
Alignment:
Q  21 taaactacacatgcaatcatcaaattgtcaattttgaaatcaacc 65  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  35026784 taaactacacatgcaatcatcaaattgtcaattttaaaatcaacc 35026740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 375
Target Start/End: Original strand, 10749695 - 10749785
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaacc 375  Q
    |||||||||||||||||||||||  |||| |||||| |||||| ||  |||||||||| ||||||||||||   | ||||||||||||||||    
T  10749695 tttcctcggcagttaactgccgctggtttactaaaa-cttcggcagttaactgccgaagggcattttcgtaaagttctcgtgtggcacaacc 10749785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 43363281 - 43363399
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||| |||||||||| |||   || |||||| |||||| ||  || |||||| ||| ||||  ||| ||||||||||||||||| |||||| |||    
T  43363281 tttcctcggtagttaactgcagccgtatttctaaaa-cttcggcagttaagtgccgagaggtatttgagtaatttactcgtgtggcacagccaaaccaaa 43363379  T
Q  384 tgtgggaacatcaattctca 403  Q
     |||||||||||||||||||    
T  43363380 agtgggaacatcaattctca 43363399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 44933911 - 44933793
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||| ||  |||||||||  |||||||  ||| |||||||||||||||   |||||| |||    
T  44933911 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcagtgccaaaccaaa 44933813  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||||||||    
T  44933812 tgtgggaacaccaattctca 44933793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 284 - 393
Target Start/End: Original strand, 30305564 - 30305674
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaa 382  Q
    ||||||||| |||||||||||||| ||||||||||||| |||| ||  ||||||||| | || |||| ||||  ||||| |||||||||| ||| || |     
T  30305564 tttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactat 30305663  T
Q  383 atgtgggaaca 393  Q
    |||||||||||    
T  30305664 atgtgggaaca 30305674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 402
Target Start/End: Original strand, 42485575 - 42485677
Alignment:
Q  300 ctgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaatt 399  Q
    |||||||| |||| || |||||||||  ||  |||||||||| | ||||||  |||||||||||||||||||| ||| || | ||||||||||| |||||    
T  42485575 ctgccgccggtttactcaaaacttcgacagttaactgccgaaggacattttgatattttactcgtgtggcacagccatactatatgtgggaacagcaatt 42485674  T
Q  400 ctc 402  Q
    |||    
T  42485675 ctc 42485677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 287 - 372
Target Start/End: Complemental strand, 45409920 - 45409836
Alignment:
Q  287 cctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcaca 372  Q
    |||||||||||||||||||||  ||| |||||| |||||| ||  |||||||||| ||||||||||||   |||||||||||||||    
T  45409920 cctcggcagttaactgccgccgatttactaaaa-cttcggcagttaactgccgaagggcattttcgtaaagtactcgtgtggcaca 45409836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 22519583 - 22519638
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccg 339  Q
    ||||||||||| |||||||||||| || ||||||||||||||||||  ||||||||    
T  22519583 tttcctcggcacttaactgccgccggtgtcctaaaaacttcggtagttaactgccg 22519638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 397
Target Start/End: Original strand, 8423810 - 8423924
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaa 382  Q
    ||||||||| ||||||||||||||  |||||||||||| |||| ||  ||||||||| | || |||| ||||  ||| | |||||||||| ||| || |     
T  8423810 tttcctcggtagttaactgccgccgatttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattaatggtgtggcacagccatactat 8423909  T
Q  383 atgtgggaacatcaa 397  Q
    |||||||||||||||    
T  8423910 atgtgggaacatcaa 8423924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 914769 - 914655
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| ||||| |||    || || ||  |||||||||| |||||||  |||  |||||||| ||||| | |||||| |||    
T  914769 tttcctcggcagttaactgcagccggtttcataa----tttggcagttaactgccgaagggcatttgggtaaattactcgtctggcatagccaaaccaaa 914674  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  914673 tgtgggaacaacaattctc 914655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 27502589 - 27502703
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| ||||| |||    ||||  ||  |||||||||  |||||||  ||| ||||||||||||||| | |||||| |||    
T  27502589 tttcctcggcagttaactgcagccggtttcataa----ttcgacagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaa 27502684  T
Q  384 tgtgggaacatcaattctc 402  Q
    ||| |||||| ||||||||    
T  27502685 tgtaggaacaacaattctc 27502703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 28618460 - 28618574
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||||| |||||||| ||| ||||| |||    ||||| ||  |||||||||| |||||||  |||  ||||| |||||||| | |||||| |||    
T  28618460 tttcctcggcatttaactgcagccggtttcataa----ttcggcagttaactgccgaagggcatttgggtaaattacttgtgtggcatagccaaaccaaa 28618555  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  28618556 tgtgggaacagcaattctc 28618574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 333 - 398
Target Start/End: Complemental strand, 30301224 - 30301160
Alignment:
Q  333 actgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaat 398  Q
    ||||||||| || ||||| |||||||||||||||||||| | ||||||| ||||||||||| ||||    
T  30301224 actgccgaagggtattttggtattttactcgtgtggcac-agcaaacaacatgtgggaacagcaat 30301160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 285 - 393
Target Start/End: Original strand, 32378943 - 32379052
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||| |||||||||||||  ||||||||||||| |||| ||  ||||||||| | || |||| ||||  ||||| |||||||||| ||| || | |    
T  32378943 ttcctcggtagttaactgccgctggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactata 32379042  T
Q  384 tgtgggaaca 393  Q
    ||||||||||    
T  32379043 tgtgggaaca 32379052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 285 - 393
Target Start/End: Original strand, 32432898 - 32433007
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||| |||||||||||||  ||||||||||||| |||| ||  ||||||||| | || |||| ||||  ||||| |||||||||| ||| || | |    
T  32432898 ttcctcggtagttaactgccgctggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactata 32432997  T
Q  384 tgtgggaaca 393  Q
    ||||||||||    
T  32432998 tgtgggaaca 32433007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 278 - 404
Target Start/End: Original strand, 32585008 - 32585130
Alignment:
Q  278 ttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaa 377  Q
    ||||| |||||||||||||||||||| ||| ||||| |||    ||||| ||  |||| ||||  | |||||  ||| ||||||||||||||| | ||||    
T  32585008 ttcagttttcctcggcagttaactgcagccggtttcataa----ttcggcagttaactaccgagggacatttgagtaatttactcgtgtggcatagccaa 32585103  T
Q  378 acaaaatgtgggaacatcaattctcaa 404  Q
    || ||||||||||| | ||||||||||    
T  32585104 accaaatgtgggaatagcaattctcaa 32585130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 372
Target Start/End: Original strand, 22550886 - 22550973
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcaca 372  Q
    |||||||||||||||||||| ||| | || |||||| |||||| ||  |||||||||| |||||||  |||  ||||||||||||||||    
T  22550886 tttcctcggcagttaactgcagccggatttctaaaa-cttcggcagttaactgccgaagggcatttaggtaaattactcgtgtggcaca 22550973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 356 - 404
Target Start/End: Original strand, 31185537 - 31185585
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaa 404  Q
    ||||||||||||||||| |||||| ||| ||||||||| ||||||||||    
T  31185537 tttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctcaa 31185585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 483868 - 483813
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccg 339  Q
    ||||||||||| |||||||||||| || ||||||||||||||| ||  ||||||||    
T  483868 tttcctcggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccg 483813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 915727 - 915774
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctca 403  Q
    ||||||||||||||||| |||||| ||| ||||||||| |||||||||    
T  915727 tttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctca 915774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 301
Target Start/End: Complemental strand, 23018777 - 23018746
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||||||||||||||||||||||||||||    
T  23018777 tgtttaagttcagatttcctcggcagttaact 23018746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 301
Target Start/End: Original strand, 26663014 - 26663045
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||||||||||||||||||||||||||||    
T  26663014 tgtttaagttcagatttcctcggcagttaact 26663045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 2416207 - 2416137
Alignment:
Q  332 aactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    ||||| |||| | |||||| |||||||||| |||||||||| ||| || | ||||||||||| ||||||||    
T  2416207 aactgtcgaaggacattttggtattttacttgtgtggcacagccatactatatgtgggaacaacaattctc 2416137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 43362328 - 43362258
Alignment:
Q  332 aactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    ||||||||| ||||||||  ||| |||||||||||| || |  ||||| ||||||||||||| ||||||||    
T  43362328 aactgccgagaggcatttgagtaatttactcgtgtgacatagtcaaaccaaatgtgggaacaacaattctc 43362258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 486249 - 486192
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| |||||||||||||   || |||| ||||||||||||||| |||||||    
T  486249 ttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaa 486192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 332 - 393
Target Start/End: Complemental strand, 5532466 - 5532405
Alignment:
Q  332 aactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaaca 393  Q
    |||||||||| |||||||  |||  |||||||||||||| | |||||| |||||||||||||    
T  5532466 aactgccgaagggcatttgggtaaattactcgtgtggcatagccaaaccaaatgtgggaaca 5532405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 393
Target Start/End: Complemental strand, 7340118 - 7340009
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||| |||||||||||||| ||||| ||||||| |||| ||  ||||||||| | || |||| ||||  ||||| |||||||||| ||| || | |    
T  7340118 ttcctcggtagttaactgccgccggtttcttaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactata 7340019  T
Q  384 tgtgggaaca 393  Q
    ||||| ||||    
T  7340018 tgtggaaaca 7340009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 404
Target Start/End: Complemental strand, 45064285 - 45064224
Alignment:
Q  343 ggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaa 404  Q
    |||||||  ||| |||||||||||||||||||||| | |||  |||||||| ||||||||||    
T  45064285 ggcatttgagtaatttactcgtgtggcacaaccaatctaaacctgggaacagcaattctcaa 45064224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 489078 - 489110
Alignment:
Q  106 aacataaacaaattaacattaatattaaaatga 138  Q
    |||||||||||||||||||||| ||||||||||    
T  489078 aacataaacaaattaacattaacattaaaatga 489110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 285 - 317
Target Start/End: Complemental strand, 45064330 - 45064298
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaa 317  Q
    ||||||||||||||||||||||| |||||||||    
T  45064330 ttcctcggcagttaactgccgccggtttcctaa 45064298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 263; Significance: 1e-146; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 402
Target Start/End: Original strand, 8580217 - 8580618
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||    
T  8580217 tacattcaattatcaatttctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaattttttttaaa 8580316  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8580317 aaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttggtttgcttgcaattcgtgaaaatggattt 8580416  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||| ||| | |||| ||| |||||  |||||||||||||||||    
T  8580417 ggtgaagattggagagaaattgagaatttagaaggttttttggaaatgggaggttctggtactgtgttctggttatgttcaattttcctcggcagttaac 8580516  T
Q  301 tgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattc 400  Q
    |||||||  ||||||||||||||||| |||||||| ||||| |||||||  ||| ||||||||||||||||| | |||| | ||||||||| | ||||||    
T  8580517 tgccgccgatttcctaaaaacttcggcagcaaactaccgaagggcatttgagtaatttactcgtgtggcacagctaaactatatgtgggaatagcaattc 8580616  T
Q  401 tc 402  Q
    ||    
T  8580617 tc 8580618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 228; E-Value: 1e-125
Query Start/End: Original strand, 1 - 375
Target Start/End: Original strand, 14401 - 14774
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||         ||    
T  14401 tacatttatttatcaattcctaaactacgcatgcaatcatcaaattttcaattttgaaatcaaccctaaccacatacaaactactctaattttttttaaa 14500  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14501 aaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 14600  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    | |||||||| |||||||||||||||||| |||| | |||||||||||||| |||||||||||||| |||| || |||||||||||||||||||||||||    
T  14601 gttgaagattggagagaaattgagaattttgaaattgttttggaaatgggaagttctggttctgcgttctggtttagttcagatttcctcggcagttaac 14700  T
Q  301 tgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaacc 375  Q
    | | |||   || || |||||||||| ||  |||||||||| | |||||  ||| ||||||||||||||||||||    
T  14701 tacagccgtatttct-aaaacttcggcagttaactgccgaaggacatttgagtaatttactcgtgtggcacaacc 14774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 28877004 - 28876700
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||| | ||||||||| ||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||         ||    
T  28877004 tacatttaattatcaatttctaaactacacatgcaatcatcaaattctcaattttgaattcaaccctaaccacatacaaactactctaatttttttaaaa 28876905  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  28876904 aaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatggccacttgatttgcttgcaattcgtgaaaatggattt 28876805  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    || ||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  28876804 ggggaagattggagagaaattgagaattttgaaggttttttggaaatgggaggttctggttctgcgttctggttatgttcagatttcctcggcagttaac 28876705  T
Q  301 tgccg 305  Q
    |||||    
T  28876704 tgccg 28876700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 7757685 - 7757386
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||         ||    
T  7757685 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaattttttttaaa 7757586  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  7757585 aaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatagattt 7757486  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    |||||||||| |||||||||||||||||| |||| | |||||||||||| | |||||||||||||||  || |||||| |||||||||||||||||||||    
T  7757485 ggtgaagattggagagaaattgagaattttgaaattgttttggaaatggaaagttctggttctgcga-gtgattaagtccagatttcctcggcagttaac 7757387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 28241511 - 28241811
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||| |||||||||| ||         ||    
T  28241511 tacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc-aattttttttaaa 28241609  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    || | |||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28241610 aacttaacataaacaaattaacattaacattaaaatgattggtacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 28241709  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaag-ttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaa 299  Q
    |||||||||| ||||||| |||||||||| ||| | ||||||| ||||||||||||||||||||||| |||| ||| || ||||||||||||||||||||    
T  28241710 ggtgaagattggagagaatttgagaattttgaatgtttttttgtaaatgggaggttctggttctgcgttctggttatgtccagatttcctcggcagttaa 28241809  T
Q  300 ct 301  Q
    ||    
T  28241810 ct 28241811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 512484 - 512709
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||          ||    
T  512484 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctattttttttttaa 512583  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| ||||||||  |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||| ||||||||| |||    
T  512584 aaataaacctaaacaaactaacattatcattaaaatgattgatacaacttacttgtgataatgtacagttgatttgcttgcaattcatgaaaatggcttt 512683  T
Q  201 ggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| || |||| |||||||    
T  512684 ggtgaagattggaaagaatttgagaa 512709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 19228384 - 19228609
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||          ||    
T  19228384 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactatatttttttaaaaa 19228483  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  19228484 aaataaacctaaacaaactaacattatcattaaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgatttt 19228583  T
Q  201 ggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| || |||| |||||||    
T  19228584 ggtgaagattggaaagaatttgagaa 19228609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 38968458 - 38968231
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnn-- 98  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||               
T  38968458 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaataaaccctaaccacatgcaaactactctaattttttttttt 38968359  T
Q  99 aaaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggat 198  Q
    |||||  ||| | |||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |    
T  38968358 aaaaagaaaccttaacaaactaacattatcattaaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgact 38968259  T
Q  199 ttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||||| || |||| |||||||    
T  38968258 ttggtgaagattggaaagaatttgagaa 38968231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 42942198 - 42942413
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa-nnnnnnnnna 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||          |    
T  42942198 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaatttttttttaa 42942297  T
Q  100 aaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatt 199  Q
    ||||| ||| |||||||| ||||||||  ||||||||||||||  ||||||||||||||||||||||  |||||||||||||||||   | |||||||||    
T  42942298 aaaataaacctaaacaaactaacattatcattaaaatgattgatgcaacttacttgtgataatgtgcggttgatttgcttgcaattaacggaaatggatt 42942397  T
Q  200 tggtgaagatttgaga 215  Q
    ||||||  ||||||||    
T  42942398 tggtgagaatttgaga 42942413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 42537510 - 42537277
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactcta------annnnn 94  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||| |||| ||||||||||||      |         
T  42537510 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaattaaccctaacaacatgcaaactactctaatttttattttt 42537411  T
Q  95 nnnnaaaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaat 194  Q
         ||||| ||| ||||||||  |||||||  |||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||| | |||    
T  42537410 tttttaaaataaacctaaacaaaccaacattatcattaaaatgattgatacaacttgcttgtgataatgtgcagttgatttgcttgcaattcgt-agaat 42537312  T
Q  195 ggatttggtgaagatttgagagaaattgagaattt 229  Q
    || ||||||| ||||| || |||||||||||||||    
T  42537311 ggctttggtgcagattggaaagaaattgagaattt 42537277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 28238191 - 28238073
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |    
T  28238191 tttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaaca 28238092  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||| | ||||||||    
T  28238091 tgtgggaagagcaattctc 28238073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 284 - 399
Target Start/End: Complemental strand, 28876695 - 28876580
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||| |||||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |    
T  28876695 tttcctcgggagttaactgccgccggtttccaaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaaca 28876596  T
Q  384 tgtgggaacatcaatt 399  Q
    |||||||||| |||||    
T  28876595 tgtgggaacaacaatt 28876580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 14280921 - 14281041
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||| |||||||||||||||| |||| |||||||| |    
T  14280921 tttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtgacacagccaaacaaca 14281020  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| |||| |||||    
T  14281021 tgtgggaacagcaatactcaa 14281041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 37814634 - 37814515
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||| ||||| | |||||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||| |    
T  37814634 tttcctcggcagttaactgccgccggtttactaaatatttcggtagcaaactgccgaagggtatttttgtattttactcgtgtggcacagccaaacaaca 37814535  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||||||||    
T  37814534 tgtgggaacagcaattctca 37814515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 19035251 - 19035137
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||  |||||||| |||||||||||||||||||||  ||||| | ||||||    
T  19035251 tcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagtcaaactatatgtgg 19035153  T
Q  389 gaacatcaattctcaa 404  Q
    ||||| ||||||||||    
T  19035152 gaacagcaattctcaa 19035137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 40624636 - 40624831
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||| |||||||| ||||| |||||||||| ||         ||    
T  40624636 tacattcatttatcaattcataaaatacacatgcaatcatcaaattgtcaattttaaaattaaccctaa-cacatgcaaactactcaaaaaaaaattaaa 40624734  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatgga 197  Q
    || | ||| |||||||| ||||||||| |||  ||||||  |    |||||||||||||||||||    ||||| ||||||||||||||||||||||    
T  40624735 aacttaacctaaacaaactaacattaacattgcaatgatcaatggtacttacttgtgataatgtggggatgattggcttgcaattcgtgaaaatgga 40624831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 8701936 - 8702131
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||     || || ||||||||||| |||||||||| ||         ||    
T  8701936 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattcatttataaaacctaaccacatgcaaactactc-aaatttttttaaa 8702034  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatgga 197  Q
    || | ||| |||||||||||||||||| |||  ||||||| | |  |||||||||||||||||||    |||||  |||||||||||||||||||||    
T  8702035 aacttaacctaaacaaattaacattaagattgcaatgattaatagtacttacttgtgataatgtggggatgattaacttgcaattcgtgaaaatgga 8702131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 284 - 404
Target Start/End: Complemental strand, 13837776 - 13837656
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||| ||||||||||||| ||   ||||||||| |||||||| |||   ||||||||||||||| |||||  |||    
T  13837776 tttcctcggcagttaactgccgccggtttactaaaaacttcggcagtttactgccgaagggcatttttgtaaagtactcgtgtggcacagccaaagcaaa 13837677  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  13837676 tgtgggaacagcaattctcaa 13837656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 19041138 - 19041258
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||| ||||||| |||||||||||  |||| | |||||||||||||||||||||||||   |||||| ||||||||||||||||||||| ||| || | |    
T  19041138 tttcttcggcagctaactgccgccgatttcgttaaaacttcggtagcaaactgccgaagaacattttggtattttactcgtgtggcacagccatactata 19041237  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  19041238 tgtgggaacagcaattctcaa 19041258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 27659992 - 27659873
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||||||||||| |||| | |||||||||||||||||| ||   ||| ||||| |||||||  ||| ||||||||||||||||| |||||| |||    
T  27659992 tttcctcggcagttaaccgccgtcggtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaa 27659893  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||||||||    
T  27659892 tgtgggaacagcaattctca 27659873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 8574734 - 8574617
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||   ||| ||||| |||||||  ||| ||||||||||| ||||| |||||| |||    
T  8574734 tttcctcgacagttaactgccgccagtttcctaaaaacttcggcagtttactaccgaagggcatttgagtaatttactcgtgt-gcacagccaaaccaaa 8574636  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  8574635 tgtgggaacaacaattctc 8574617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 20422300 - 20422215
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactc 86  Q
    ||||||||||||||||||| || ||||||||| ||||||||||||||||||||   | ||||||||||||||||| ||||||||||    
T  20422300 tacattcatttatcaattcatacactacacatccaatcatcaaattgtcaattcctacatcaaccctaaccacatgcaaactactc 20422215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 300 - 402
Target Start/End: Complemental strand, 11027131 - 11027029
Alignment:
Q  300 ctgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaatt 399  Q
    |||||||| |||| || |||||||||| ||  |||||||||| |||||||| ||||||||||||||||||||| ||| || | ||||||||||| |||||    
T  11027131 ctgccgccggtttacttaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaatt 11027032  T
Q  400 ctc 402  Q
    |||    
T  11027031 ctc 11027029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 30711180 - 30711298
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||||||||||||||||||   |||||||||||||||| ||  |||||||||   |||||| |||| |||||| |||||||| | |||||| |||    
T  30711180 tttcctcggcagttaactgccgccgacttcctaaaaacttcggcagttaactgccgaggagcatttgcgtaatttacttgtgtggcatagccaaactaaa 30711279  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||| ||| | ||||||||    
T  30711280 tgtgagaaaagcaattctc 30711298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 17658683 - 17658488
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||||||||||||   ||||||||||||||||| || ||||||||||||     ||||| |||||||||||||||||||||| ||         ||    
T  17658683 tacattcatttatcaataaataaactacacatgcaatgatgaaattgtcaattcatttatcaaacctaaccacatacaaactactc-aaattttttaaaa 17658585  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatgga 197  Q
    || | ||| |||||||||||||||||| |||  ||||||| |    |||||| ||||||||||||    |||||  |||||||||||||||||||||    
T  17658584 aacttaacctaaacaaattaacattaacattgcaatgattaatggtacttacctgtgataatgtggggatgattgtcttgcaattcgtgaaaatgga 17658488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 286 - 402
Target Start/End: Original strand, 11033485 - 11033601
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||  |||||||| |||| || |||||||||| ||  |||||||||| | |||||| ||||||||||| ||||||||| ||| || | |||    
T  11033485 tcctcggtagtttgctgccgccggtttactcaaaacttcggcagttaactgccgaaggacattttggtattttactcatgtggcacagccatactatatg 11033584  T
Q  386 tgggaacatcaattctc 402  Q
    |||||||| ||||||||    
T  11033585 tgggaacagcaattctc 11033601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 332 - 403
Target Start/End: Original strand, 38860237 - 38860308
Alignment:
Q  332 aactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctca 403  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||| || | ||||||||||| |||||||||    
T  38860237 aactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaattctca 38860308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 14279902 - 14279792
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaa 382  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||||  ||||||||| | || |||| ||||  ||||| |||||||||| ||| || |     
T  14279902 tttcctcgggagttaactgccgccggtttcctaaaaacctcggtagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactat 14279803  T
Q  383 atgtgggaaca 393  Q
    |||||||||||    
T  14279802 atgtgggaaca 14279792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 3892461 - 3892575
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| ||||| |||    ||||| ||  |||||||||  | |||||  ||| ||||||||||||||| |||||||| |||    
T  3892461 tttcctcggcagttaactgcagccggtttcataa----ttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcataaccaaaccaaa 3892556  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  3892557 tgtgggaacaacaattctc 3892575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 300 - 403
Target Start/End: Original strand, 28241836 - 28241939
Alignment:
Q  300 ctgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaatt 399  Q
    |||||||| |||  || |||||||||| ||  |||||||||| || |||||  |||||||||||||||||||| ||| || | ||||||||||| |||||    
T  28241836 ctgccgccggttcactcaaaacttcggcagttaactgccgaagggtattttgatattttactcgtgtggcacagccatactatatgtgggaacaacaatt 28241935  T
Q  400 ctca 403  Q
    ||||    
T  28241936 ctca 28241939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 286 - 372
Target Start/End: Complemental strand, 30705187 - 30705101
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcaca 372  Q
    ||||||| |||||||||||||| |||| ||||||||||||| ||  |||||| ||| ||||||| ||||  | ||||||||||||||    
T  30705187 tcctcggtagttaactgccgccggtttactaaaaacttcggcagttaactgctgaagggcatttacgtaaatgactcgtgtggcaca 30705101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 402
Target Start/End: Complemental strand, 38853515 - 38853413
Alignment:
Q  300 ctgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaatt 399  Q
    |||||| | |||| || |||||||||| ||  |||||||||| |||||||| ||||||||||||||||||||| ||| || | || || ||||| |||||    
T  38853515 ctgccgtcggtttactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatatgagaacaacaatt 38853416  T
Q  400 ctc 402  Q
    |||    
T  38853415 ctc 38853413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 3891535 - 3891418
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||| ||  |||||||||  || ||||  ||| ||||||||||||||||| |||||  |||    
T  3891535 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaagtaaa 3891437  T
Q  384 tgtgggaacatcaattctc 402  Q
     ||||||||| ||||||||    
T  3891436 agtgggaacagcaattctc 3891418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 404
Target Start/End: Original strand, 37820930 - 37820988
Alignment:
Q  346 attttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaa 404  Q
    |||| |||| ||||||||||||||||||||| || | ||||||||||| ||||||||||    
T  37820930 atttgcgtaatttactcgtgtggcacaaccatactatatgtgggaacaacaattctcaa 37820988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 28880203 - 28880263
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaattt 229  Q
    ||||||||| ||||||||||||||   ||||||| ||||||| |||| |||||||||||||    
T  28880203 ttgatttgcatgcaattcgtgaaataagatttggcgaagattggagaaaaattgagaattt 28880263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 169 - 229
Target Start/End: Original strand, 30708785 - 30708845
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaattt 229  Q
    ||||||||| | ||||||||||||   ||||||| ||||||| ||||||||||||||||||    
T  30708785 ttgatttgcctccaattcgtgaaagaagatttggcgaagattggagagaaattgagaattt 30708845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 340
Target Start/End: Original strand, 38855732 - 38855788
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga 340  Q
    |||||||||||||||||||||||| |||||||  ||||||||| ||  |||||||||    
T  38855732 tttcctcggcagttaactgccgccggtttccttcaaacttcggcagttaactgccga 38855788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 301
Target Start/End: Complemental strand, 28238231 - 28238200
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||||||||||||||||||||||||||||    
T  28238231 tgtttaagttcagatttcctcggcagttaact 28238200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 28886414 - 28886529
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||| ||||  ||||||||  |||||||| |||||||| ||  || ||||||| ||||||   ||  ||||||||||||||||| ||| || | |    
T  28886414 tttcctcggtagtttgctgccgccgatttcctaataacttcggcagttaattgccgaagggcattaaggtcatttactcgtgtggcacagccatactata 28886513  T
Q  384 tgtgggaacatcaatt 399  Q
    ||||||||||| ||||    
T  28886514 tgtgggaacataaatt 28886529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 317 - 403
Target Start/End: Complemental strand, 5796 - 5710
Alignment:
Q  317 aaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctca 403  Q
    |||||||||| ||  |||||||||  ||| |||  ||| ||||||||||||||||| | |||| ||||||||||||| |||| ||||    
T  5796 aaaacttcggcagttaactgccgaggggcgtttgagtaatttactcgtgtggcacagctaaaccaaatgtgggaacaacaatactca 5710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 8574799 - 8574761
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaact 322  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  8574799 tttcctcggcagttaactaccgccggtttcctaaaaact 8574761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 282 - 340
Target Start/End: Original strand, 11029023 - 11029081
Alignment:
Q  282 gatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga 340  Q
    |||||||||||||||||||||||||| ||| |||  ||||||||| ||  |||||||||    
T  11029023 gatttcctcggcagttaactgccgccggttgccttcaaacttcggcagttaactgccga 11029081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 273 - 319
Target Start/End: Original strand, 42942461 - 42942507
Alignment:
Q  273 ttaagttcagatttcctcggcagttaactgccgccagtttcctaaaa 319  Q
    ||||||||||||||||||||||||||| ||||||  |||| ||||||    
T  42942461 ttaagttcagatttcctcggcagttaattgccgctggttttctaaaa 42942507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 19041088 - 19041129
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||| |||| ||| |||||||||||||||||||||||||    
T  19041088 ttctgcgttctggttatgttcagatttcctcggcagttaact 19041129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 28241248 - 28241280
Alignment:
Q  106 aacataaacaaattaacattaatattaaaatga 138  Q
    |||||||||||||||||||||| ||||||||||    
T  28241248 aacataaacaaattaacattaacattaaaatga 28241280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 286 - 402
Target Start/End: Original strand, 38408490 - 38408605
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| |||||||||||| | |||| |||||| |||||| ||  || ||||||| |||||||  |||  ||||||||||| | || |||||| |||||    
T  38408490 tcctcgggagttaactgccgtcggttttctaaaa-cttcggcagttaattgccgaagggcatttaggtaaattactcgtgtgtctcagccaaaccaaatg 38408588  T
Q  386 tgggaacatcaattctc 402  Q
    ||  |||| ||||||||    
T  38408589 tgtcaacaacaattctc 38408605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 254; Significance: 1e-141; HSPs: 2)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 7779 - 7479
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||    
T  7779 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaatttttttaaaa 7680  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7679 aaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 7580  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  7579 ggtgaagattggagagaaattgagaatttagaaagtgttttggaaatgggaggttctggttctgcgatttgtttaagttcagatttcctcggcagttaac 7480  T
Q  301 t 301  Q
    |    
T  7479 t 7479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 7470 - 7352
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||| ||| |||||||||| | || ||||||||||||| ||   ||||||||| ||||||||||||   |||||||||| |||| |||||| | |    
T  7470 tttcctcggtagtcaactgccgccgggttactaaaaacttcggcagtttactgccgaagggcattttcgtaaagtactcgtgtgtcacagccaaaccaga 7371  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  7370 tgtgggaacaacaattctc 7352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 230; Significance: 1e-126; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 29622136 - 29622436
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||         ||    
T  29622136 tacattcaattatcaatttctaaactacacatgcaatcatcaaattctcaattttgaaatcaaccctaaccacatacaaactactctaatttttttaaaa 29622235  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29622236 aaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 29622335  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    |||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||    
T  29622336 ggtgaagattggagagaaattgagaattttgaaggttttttggaaatgggaggttctggttctgcgttctggttatgttcagatttcctcggcagttaac 29622435  T
Q  301 t 301  Q
    |    
T  29622436 t 29622436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 30890422 - 30890122
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||| |||||||||| ||         ||    
T  30890422 tacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc-aatttttttaaaa 30890324  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    || | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30890323 aacttaacataaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 30890224  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaag-ttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaa 299  Q
    |||||||||| ||||||| |||||||||| ||| | ||||||| ||||||||||||||||||||||| |||| ||| || ||||||||||||||||||||    
T  30890223 ggtgaagattggagagaatttgagaattttgaatgtttttttgtaaatgggaggttctggttctgcgttctggttatgtccagatttcctcggcagttaa 30890124  T
Q  300 ct 301  Q
    ||    
T  30890123 ct 30890122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 27 - 301
Target Start/End: Complemental strand, 22524461 - 22524187
Alignment:
Q  27 acacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaaaaatcaacataaacaaattaacatta 126  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||||||         |||||||||| |||||||||||||||||    
T  22524461 acacatgcaatcatcaaattatcaattttaaaatcaaccctaaccacatgcaaaccactctaattttttta-aaaaatcaacctaaacaaattaacatta 22524363  T
Q  127 atattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
      |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||||||| ||||||| |||||||    
T  22524362 tcattaaaatgattgacacaacttacttgtgataatttgcagttgatttgcttgcaattcgtgaaaatcgatttggtgaagattggagagaatttgagaa 22524263  T
Q  227 tttagaaagttttttggaaatgg-gaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaact 301  Q
    ||| | |  | |||| ||||||| || |||||| ||||||| |||| ||| |||||||||| ||||||||||||||    
T  22524262 ttttggagttgtttttgaaatggagaagttctgtttctgcgttctggttatgttcagattttctcggcagttaact 22524187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 118 - 305
Target Start/End: Complemental strand, 19925001 - 19924812
Alignment:
Q  118 ttaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagaga 217  Q
    |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  19925001 ttaacattaacattaaaatgattgacacaacttacttgtgataatgcgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagattggagaga 19924902  T
Q  218 aattgagaatttagaaag--ttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaactgccg 305  Q
    |||||||||||| ||| |  ||||||| ||||||||||||||||||||||| |||| ||| || ||||||||||||||||||||||||||    
T  19924901 aattgagaattttgaatgttttttttgtaaatgggaggttctggttctgcgttctggttatgtccagatttcctcggcagttaactgccg 19924812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 52802492 - 52802265
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||         ||    
T  52802492 tacattcatttatcaattcttaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaatttttttaaaa 52802393  T
Q  101 aaa-tcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatt 199  Q
    ||| ||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||   ||    
T  52802392 aaaatcaacctaaacaaattaacattatcattaaaatgattgacacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaataactt 52802293  T
Q  200 tggtgaagatttgagagaaattgagaattt 229  Q
    |||||| ||||   ||||||||||||||||    
T  52802292 tggtgacgatt--ggagaaattgagaattt 52802265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 47502676 - 47502448
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||||||||         ||    
T  47502676 tacattcatttatcaattcctaaattacacatgcaatcatcaaattgtcaattttaaaatcaactctaaccacatgcaaactactctaattttttttaaa 47502577  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||| ||||||  |||    
T  47502576 aaataaacctaaacaaactaacattatcattaaaatgattgatacaacttacttgtgataatgtgcagttgatttgtttgcaattcgtaaaaatgatttt 47502477  T
Q  201 ggtgaagatttgagagaaattgagaattt 229  Q
    |||||||||| ||||||||||| ||||||    
T  47502476 ggtgaagattggagagaaattgtgaattt 47502448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 128; E-Value: 7e-66
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 31783440 - 31783727
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnn-- 98  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||               
T  31783440 tacatttatttatcaattcctaaactacacatacaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaatttttttttta 31783539  T
Q  99 --aaaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatgg 196  Q
      |||||| ||| |||||||||||||||||| ||||||||||||||||                ||||||||||||||||||||||||||||||||||||    
T  31783540 taaaaaataaacctaaacaaattaacattaacattaaaatgattgaca----------------atgtgcacttgatttgcttgcaattcgtgaaaatgg 31783623  T
Q  197 atttggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagt 296  Q
    ||||||||||||||  ||||||||||||||||| |||| | |||||||||| ||| ||||||||||| |||  || ||||||  ||||||||||||||||    
T  31783624 atttggtgaagattgaagagaaattgagaattttgaaattgttttggaaataggaagttctggttctacga-atgattaagtcaagatttcctcggcagt 31783722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 4 - 226
Target Start/End: Original strand, 35258588 - 35258809
Alignment:
Q  4 attcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaaaaa 103  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||         |||||    
T  35258588 attcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaatttttttt-aaaaa 35258686  T
Q  104 tcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggt 203  Q
    | ||| |||||||| |||||||| ||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||| ||||||| | ||||||    
T  35258687 taaacctaaacaaactaacattattattaaaatgattgatacaacttacttgtgataatgtgcagttgatatgcttgcaattcatgaaaatagctttggt 35258786  T
Q  204 gaagatttgagagaaattgagaa 226  Q
    ||||||| || |||| |||||||    
T  35258787 gaagattggaaagaatttgagaa 35258809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 23275816 - 23276045
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnna- 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||               
T  23275816 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaatttaaaaatcaaccctaaccacatgcaaactactctaattttttttttt 23275915  T
Q  100 ---aaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatgg 196  Q
       ||||| ||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||     
T  23275916 tttaaaataaacctaaacaaactaacattatcattaaaatgattgatacaacttacttgtgataacgtgcagttgatttgcttgcaattcgtgaaaatga 23276015  T
Q  197 atttggtgaagatttgagagaaattgagaa 226  Q
     ||||||||||||| || |||| |||||||    
T  23276016 ctttggtgaagattggaaagaatttgagaa 23276045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 51321075 - 51320851
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||           |    
T  51321075 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactcta--ttttttttta 51320978  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgat--tgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggat 198  Q
    |||| ||| |||||||| ||||||||  |||||||||||  | |  ||||||||||||||||||||||| ||||||||||| |||||||||||||||| |    
T  51320977 aaataaacctaaacaaactaacattatcattaaaatgattattattcaacttacttgtgataatgtgcagttgatttgcttccaattcgtgaaaatggtt 51320878  T
Q  199 ttggtgaagatttgagagaaattgaga 225  Q
    |||||||||||| || |||| ||||||    
T  51320877 ttggtgaagattggaaagaatttgaga 51320851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 45825237 - 45825023
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||         ||    
T  45825237 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaattttttttaaa 45825138  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |       ||||||    ||||||||  |||||||||||||| ||||||||||||||||||| |||  |||||||||| ||||||||||||||||  |||    
T  45825137 a-------ataaac----taacattatcattaaaatgattgatacaacttacttgtgataatatgcgattgatttgctggcaattcgtgaaaatgatttt 45825049  T
Q  201 ggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| |||||||||||||||    
T  45825048 ggtgaagattggagagaaattgagaa 45825023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 8548690 - 8548809
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |    
T  8548690 tttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaaca 8548789  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||||||||    
T  8548790 tgtgggaacagcaattctca 8548809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 11183542 - 11183314
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||| |||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||| |||||||||| |||||||||||||               
T  11183542 tacattaatttatcaattcataaactacacatgtaatcatcaaattgtcaattttaaaatcaactctaaccacatgcaaactactctaatttttcttttt 11183443  T
Q  101 ---aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatgga 197  Q
       |||| ||| |||||||| |||||| |  |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| |     
T  11183442 tttaaataaacctaaacaaactaacataatcattaaaataattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaattgc 11183343  T
Q  198 tttggtgaagatttgagagaaattgagaa 226  Q
    ||||||||||||| || |||| |||||||    
T  11183342 tttggtgaagattggaaagaatttgagaa 11183314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 19527255 - 19527409
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||          |    
T  19527255 tacattcatttatcaattcataaaatacacatgcaatcatcaaattgtcaattttaaaatcaaccataaccacatgcaaactactctaatttttttttta 19527354  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttg 155  Q
    |||||||| |||||||||||||||||  |||||||||||||||||||||||||||    
T  19527355 aaatcaacttaaacaaattaacattatcattaaaatgattgacacaacttacttg 19527409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 3728787 - 3728669
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||| |    
T  3728787 tttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaagagcattttcgtattttactcgtgtggcacagccaaacaaga 3728688  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  3728687 tgtgggaacagcaattctc 3728669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 15051369 - 15051488
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| |    
T  15051369 tttcctcggcagttaactgccgccggtttactaaatacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtgacacaaccaaacaaca 15051468  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||| | |||||||||    
T  15051469 tgtgggaagagcaattctca 15051488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 26879316 - 26879436
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||| ||| || | |    
T  26879316 tttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactggtgtggcacagccatactata 26879415  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  26879416 tgtgggaacaacaattctcaa 26879436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 284 - 398
Target Start/End: Complemental strand, 38771681 - 38771567
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||| |    
T  38771681 tttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaaca 38771582  T
Q  384 tgtgggaacatcaat 398  Q
    |||||||||| ||||    
T  38771581 tgtgggaacagcaat 38771567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 284 - 404
Target Start/End: Complemental strand, 3944026 - 3943906
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||| |    
T  3944026 tttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaaca 3943927  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    ||||| |||| |||| |||||    
T  3943926 tgtggaaacagcaatactcaa 3943906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 284 - 388
Target Start/End: Original strand, 29622445 - 29622549
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||||| |||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |    
T  29622445 tttcctcggcaattaactgccgccggtttccaaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaaca 29622544  T
Q  384 tgtgg 388  Q
    |||||    
T  29622545 tgtgg 29622549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 284 - 398
Target Start/End: Original strand, 20353956 - 20354070
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| || ||||| ||||||||||||||||||||| |||||||| |    
T  20353956 tttcctcggcagttaactgccgccggtttcctaaaaacctcgatagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaaca 20354055  T
Q  384 tgtgggaacatcaat 398  Q
    |||||||||| ||||    
T  20354056 tgtgggaacagcaat 20354070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 3993864 - 3993983
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||| || |||||  |||||||||||||||||||| |||||||| |    
T  3993864 tttcctcggcagttaactgccgccggtttcctaaaaacctcgatagcaaactgccgaagggtattttgatattttactcgtgtggcacagccaaacaaca 3993963  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||| ||||    
T  3993964 tgtgggaacagcaatactca 3993983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 19928871 - 19928985
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| ||||||||||||| || ||||||||||| |||  |||||||| ||||||||||||||||||||| |||||||| ||||||    
T  19928871 tcggcagttaactgccgccggtttcctaaaaacatcagtagcaaactgtcgaggggcattttggtattttactcgtgtggcacagccaaacaacatgtgg 19928970  T
Q  389 gaacatcaattctca 403  Q
    ||||| |||||||||    
T  19928971 gaacagcaattctca 19928985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11196241 - 11196153
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa 89  Q
    |||||| |||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| |||||||||||||    
T  11196241 tacattaatttatcaattcataaactacacatgcaatcatcaaaatgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 11196153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 2425528 - 2425626
Alignment:
Q  131 taaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaattt 229  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||   ||||||||||||||| |||| || ||| ||||||    
T  2425528 taaaatgattgacacaacttacttgtgataatgcgcagttgatttgcttgcaattcgtgaaagaagatttggtgaagattggagaaaatttgtgaattt 2425626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 300 - 398
Target Start/End: Complemental strand, 20556934 - 20556836
Alignment:
Q  300 ctgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaat 398  Q
    |||||||| ||||||||||||| ||| ||||||||||||||| || ||||| ||||||||||||||||||||| |||||||| ||||||||||| ||||    
T  20556934 ctgccgccggtttcctaaaaacctcgatagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaacatgtgggaacagcaat 20556836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 260 - 402
Target Start/End: Original strand, 3732350 - 3732492
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtatttta 359  Q
    ||||||| |||| ||| |||||| ||||||||| ||||  |||||||| |||  || |||||||||| ||  |||||||||| |||||||| ||||||||    
T  3732350 ttctgcgttctggttatgttcagttttcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaatggcattttggtatttta 3732449  T
Q  360 ctcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    ||||||||||||| ||| || | ||||||||||| ||||||||    
T  3732450 ctcgtgtggcacagccatactatatgtgggaacagcaattctc 3732492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 27 - 139
Target Start/End: Original strand, 2425113 - 2425224
Alignment:
Q  27 acacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaaaaatcaacataaacaaattaacatta 126  Q
    |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||||||||         |||||||||| |||||||||||||||||    
T  2425113 acacatgcaatcatcaaattatcaattttaaaatcaactctaaccacatacaaactactctaa-tttttttaaaaaatcaacctaaacaaattaacatta 2425211  T
Q  127 atattaaaatgat 139  Q
      |||||||||||    
T  2425212 tgattaaaatgat 2425224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 300 - 404
Target Start/End: Complemental strand, 13629440 - 13629336
Alignment:
Q  300 ctgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaatt 399  Q
    |||||||| |||| || |||||||||| ||  |||||||||| |||||||| ||||||||||||||||||||||||| || | ||||||||||| |||||    
T  13629440 ctgccgccggtttactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacaaccatactatatgtgggaacagcaatt 13629341  T
Q  400 ctcaa 404  Q
    |||||    
T  13629340 ctcaa 13629336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 300 - 403
Target Start/End: Complemental strand, 19924791 - 19924688
Alignment:
Q  300 ctgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaatt 399  Q
    ||||||||||||| || |||||||||| ||  |||||||||| |||||||| ||||||||||||||||||||| ||| || | ||||||||||| |||||    
T  19924791 ctgccgccagtttactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaatt 19924692  T
Q  400 ctca 403  Q
    ||||    
T  19924691 ctca 19924688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 285 - 403
Target Start/End: Complemental strand, 2365286 - 2365168
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaat 384  Q
    |||||||| ||||| |||||||| |||| ||||||||||||| ||  |||||||||| |||||||  ||  ||||||||||||||||| |||||| || |    
T  2365286 ttcctcggtagttagctgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttaggtcatttactcgtgtggcacagccaaaccaatt 2365187  T
Q  385 gtgggaacatcaattctca 403  Q
    ||||||||| |||||||||    
T  2365186 gtgggaacaacaattctca 2365168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 318 - 408
Target Start/End: Complemental strand, 8473801 - 8473711
Alignment:
Q  318 aaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaacaat 408  Q
    ||||||||||||  |||||||||| |||||||||||||||||||||||||||||| ||| || | |||||||||||  |||||||||||||    
T  8473801 aaacttcggtagttaactgccgaagggcattttcgtattttactcgtgtggcacatccatactatatgtgggaacagtaattctcaacaat 8473711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 260 - 402
Target Start/End: Complemental strand, 26875769 - 26875627
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtatttta 359  Q
    ||||||| |||| ||| || ||| ||||||||||||||| |||||||| |||  ||||||||||||| ||  |||||||||| |||||||| ||||||||    
T  26875769 ttctgcgttctgattatgtccagttttcctcggcagttagctgccgccggttcactaaaaacttcggcagttaactgccgaagggcatttttgtatttta 26875670  T
Q  360 ctcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    || |||||||||| ||| || | | ||||||| | ||||||||    
T  26875669 ctggtgtggcacagccatactatacgtgggaatagcaattctc 26875627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 286 - 403
Target Start/End: Complemental strand, 22397870 - 22397753
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    |||||||||||||||||||||| |||| || |||||||||| ||  |||||||||| || ||||| ||||||||||||||||||||| ||  || | | |    
T  22397870 tcctcggcagttaactgccgccggtttactcaaaacttcggcagttaactgccgaagggtattttggtattttactcgtgtggcacagccttactatacg 22397771  T
Q  386 tgggaacatcaattctca 403  Q
    |||||||| |||||||||    
T  22397770 tgggaacaacaattctca 22397753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 300 - 407
Target Start/End: Complemental strand, 30890097 - 30889990
Alignment:
Q  300 ctgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaatt 399  Q
    |||||||| |||| || |||||||| | ||  |||||||||| |||||||| ||||||||||||||||||||| ||| || | ||||||||||| |||||    
T  30890097 ctgccgccggtttactcaaaacttctgcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacaacaatt 30889998  T
Q  400 ctcaacaa 407  Q
    ||||||||    
T  30889997 ctcaacaa 30889990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 38633179 - 38633292
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||| | ||| |||||||||||||| ||   |||  ||||||||||||  ||| ||||||||||||||||| |||||| | ||||||    
T  38633179 tcggcagttaactgccgtcggttgcctaaaaacttcggcagtttactatcgaaaggcatttgagtaatttactcgtgtggcacagccaaactatatgtgg 38633278  T
Q  389 gaacatcaattctc 402  Q
    ||||| ||||||||    
T  38633279 gaacaacaattctc 38633292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 284 - 404
Target Start/End: Complemental strand, 19161944 - 19161825
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| | || |||||| |||||| ||  ||||||||||||||||||  ||| ||||||| ||||||||| |||||| |||    
T  19161944 tttcctcggcagttaactgcagccggatttctaaaa-cttcggcagttaactgccgaaaggcatttgagtaatttactcttgtggcacagccaaaccaaa 19161846  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||| |  |||||||||    
T  19161845 tgtgggaatagtaattctcaa 19161825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 286 - 402
Target Start/End: Original strand, 44621140 - 44621256
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||| | |||||| | |||| || ||||||| || ||  |||||||||| |||||||||||||||||||||||||||||||||| || | | |    
T  44621140 tcctcggtagtaagctgccgtcggtttactcaaaactttggcagttaactgccgaagggcattttcgtattttactcgtgtggcacaaccatactatacg 44621239  T
Q  386 tgggaacatcaattctc 402  Q
    |||||||| ||||||||    
T  44621240 tgggaacaacaattctc 44621256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 19914518 - 19914400
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||| ||  |||||||||  |||||||  ||| ||||||||||||||||| |||||||| |    
T  19914518 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggaagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaacaaca 19914420  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||||||||    
T  19914419 tgtgggaacaacaattctca 19914400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 586626 - 586743
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||| ||  |||||||||| || ||||  ||| ||||||||||||||||| |||||| |||    
T  586626 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaa 586724  T
Q  384 tgtgggaacatcaattctc 402  Q
     ||||||||| ||||||||    
T  586725 agtgggaacagcaattctc 586743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 30195452 - 30195522
Alignment:
Q  332 aactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||| |||||||  ||| ||||||||||||||| | |||||| ||||||||||||| ||||||||    
T  30195452 aactgccgaagggcatttgagtaatttactcgtgtggcatagccaaaccaaatgtgggaacaacaattctc 30195522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 285 - 393
Target Start/End: Complemental strand, 3983138 - 3983029
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||| |||||||||||||| ||||||||||||| |||| ||  ||||||||| | || |||| ||||  ||||| |||||||||| ||| || | |    
T  3983138 ttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactata 3983039  T
Q  384 tgtgggaaca 393  Q
    ||||||||||    
T  3983038 tgtgggaaca 3983029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 19925103 - 19925018
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactc 86  Q
    ||||||||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||| ||||||||||    
T  19925103 tacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc 19925018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 285 - 393
Target Start/End: Original strand, 31945883 - 31945992
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||| |||||||||||||| ||||||||||||| |||| ||  ||||||||| | || |||| ||||  ||||| |||||||||| ||| || | |    
T  31945883 ttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactata 31945982  T
Q  384 tgtgggaaca 393  Q
    ||||||||||    
T  31945983 tgtgggaaca 31945992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 333 - 402
Target Start/End: Original strand, 43012714 - 43012783
Alignment:
Q  333 actgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||||||||||  ||| ||||||||||||||| | |||||| ||||||||||| | ||||||||    
T  43012714 actgccgaaaggcatttgagtaatttactcgtgtggcatagccaaaccaaatgtgggaagagcaattctc 43012783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 169 - 224
Target Start/End: Complemental strand, 13636326 - 13636271
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgag 224  Q
    |||||||||| |||||||||||||   ||||||| |||||||||||||||||||||    
T  13636326 ttgatttgctcgcaattcgtgaaagaagatttggcgaagatttgagagaaattgag 13636271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 285 - 393
Target Start/End: Original strand, 38776148 - 38776257
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||| ||||| |||||||| ||||||||||||| |||| ||  ||||||||| | || |||| ||||  ||||| |||||||||| ||| || | |    
T  38776148 ttcctcggtagttatctgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactata 38776247  T
Q  384 tgtgggaaca 393  Q
    ||||||||||    
T  38776248 tgtgggaaca 38776257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 356 - 404
Target Start/End: Complemental strand, 43011808 - 43011760
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaa 404  Q
    ||||||||||||||||| |||||| ||| ||||||||| ||||||||||    
T  43011808 tttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctcaa 43011760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 301
Target Start/End: Complemental strand, 3728827 - 3728796
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||||||||||||||||||||||||||||    
T  3728827 tgtttaagttcagatttcctcggcagttaact 3728796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 301
Target Start/End: Original strand, 8548650 - 8548681
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||||||||||||||||||||||||||||    
T  8548650 tgtttaagttcagatttcctcggcagttaact 8548681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 402
Target Start/End: Complemental strand, 4883214 - 4883168
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||||| |||| |||||| ||||||||||||| ||||||||    
T  4883214 tttactcgtgtgacacagccaaaccaaatgtgggaacaacaattctc 4883168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 22528666 - 22528736
Alignment:
Q  332 aactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||| || ||||  |||  |||||||||||| ||| |||| | ||||||||||||||||||||||    
T  22528666 aactgccgaagggaatttaggtaaattactcgtgtggtacagccaatccaaatgtgggaacatcaattctc 22528736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 53
Target Start/End: Original strand, 17514421 - 17514470
Alignment:
Q  4 attcatttatcaattcctaaactacacatgcaatcatcaaattgtcaatt 53  Q
    |||||||||||||||| ||||||||||| | |||| ||||| ||||||||    
T  17514421 attcatttatcaattcataaactacacacgtaatcttcaaaatgtcaatt 17514470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 49857655 - 49857740
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactc 86  Q
    ||||||||||||||||  | ||||||||||||||||| || ||||| ||||||     || || ||||||||||| ||||||||||    
T  49857655 tacattcatttatcaaaacataaactacacatgcaatgataaaattatcaattcatttataaaacctaaccacatgcaaactactc 49857740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 260 - 304
Target Start/End: Complemental strand, 2365337 - 2365293
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgcc 304  Q
    ||||||| |||| ||| |||||| |||||||||||||||||||||    
T  2365337 ttctgcgttctggttatgttcagttttcctcggcagttaactgcc 2365293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 138
Target Start/End: Complemental strand, 30890685 - 30890653
Alignment:
Q  106 aacataaacaaattaacattaatattaaaatga 138  Q
    |||||||||||||||||||||| ||||||||||    
T  30890685 aacataaacaaattaacattaacattaaaatga 30890653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 404
Target Start/End: Complemental strand, 47652708 - 47652660
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaa 404  Q
    |||||||||||| |||| |||||| ||| ||||||||| ||||||||||    
T  47652708 tttactcgtgtgacacagccaaaccaaacgtgggaacagcaattctcaa 47652660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 404
Target Start/End: Original strand, 49661825 - 49661873
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaa 404  Q
    ||||||||||||||  |||||||| |||||| |||||| ||||||||||    
T  49661825 tttactcgtgtggcctaaccaaaccaaatgtaggaacaacaattctcaa 49661873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 222; Significance: 1e-122; HSPs: 92)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 21022600 - 21022900
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |          ||    
T  21022600 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactcaatttttttaaaaa 21022699  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21022700 aaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 21022799  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    |||||||||| ||||| ||||||||||||||||| | |||||||||||||| ||||||||| |||| |||| || |||||||||||||||||||||||||    
T  21022800 ggtgaagattggagagcaattgagaatttagaaattgttttggaaatgggaagttctggttttgcgttctggtttagttcagatttcctcggcagttaac 21022899  T
Q  301 t 301  Q
    |    
T  21022900 t 21022900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 40357992 - 40358292
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||         ||    
T  40357992 tacattcaattatcaatttctaaactacacatgcaatcatcaaattctcaattttgaaatcaaccctaaccacatacaaactactctaattttttttaaa 40358091  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40358092 aaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 40358191  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    |||||||||| |||||||||||||||||| ||| ||||||||||||||||||||| || ||||||| |||| ||| ||||||||||||||||||||||||    
T  40358192 ggtgaagattggagagaaattgagaattttgaaggttttttggaaatgggaggttttgattctgcgttctggttatgttcagatttcctcggcagttaac 40358291  T
Q  301 t 301  Q
    |    
T  40358292 t 40358292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 50275095 - 50274793
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||         ||    
T  50275095 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaattaaccctaaccacatgcaaactactctaatttttttttaa 50274996  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  50274995 aaattaacctaaacaaattaacattatcattaaaatgattgacacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatggattt 50274896  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgg-gaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaa 299  Q
    |||||||||| ||||||||||| |||||| |||  | ||||||||||||  |||||||||||||||| | || ||| |||||||||||||||||||||||    
T  50274895 ggtgaagattggagagaaattgtgaattttgaagatgttttggaaatggaaaggttctggttctgcg-tatgattatgttcagatttcctcggcagttaa 50274797  T
Q  300 ctgc 303  Q
    ||||    
T  50274796 ctgc 50274793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 1308826 - 1309126
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||| |||||||||| ||         ||    
T  1308826 tacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc-aatttttttaaaa 1308924  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    || | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1308925 aacttaacataaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 1309024  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaag-ttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaa 299  Q
    |||||||||| ||||||| |||||||||| ||| | ||||||| ||||||||||||||||||||||| |||| ||| || ||||||||||||||||||||    
T  1309025 ggtgaagattggagagaatttgagaattttgaatgtttttttgtaaatgggaggttctggttctgcgttctggttatgtccagatttcctcggcagttaa 1309124  T
Q  300 ct 301  Q
    ||    
T  1309125 ct 1309126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 1089296 - 1089596
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||| | |||||||||| |||||| || ||||||||||||     || || ||||||||||| |||||||||| ||         ||    
T  1089296 tacattcatttatcaatacataaactacacttgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc-aattttttaaaaa 1089394  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    || | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1089395 aacttaacataaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 1089494  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaag-ttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaa 299  Q
    |||||||||| |||||||||||||||||| ||| | ||||||| |||||||||||||||||||| |  |||| ||| || ||||||||||||||||||||    
T  1089495 ggtgaagattggagagaaattgagaattttgaatgtttttttgtaaatgggaggttctggttctacattctggttatgtccagatttcctcggcagttaa 1089594  T
Q  300 ct 301  Q
    ||    
T  1089595 ct 1089596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 30726453 - 30726753
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||| | |||||||||| |||||| || ||||||||||||     || || |||||||| || |||||||||| ||         ||    
T  30726453 tacattcatttatcaatacataaactacacgtgcaatgatgaaattgtcaattcatttataaaacctaaccaaatgcaaactactc-aattttttttaaa 30726551  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    || | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30726552 aacttaacataaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 30726651  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaag-ttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaa 299  Q
    |||||||||| |||||||||||||||||| ||| | ||||||| |||||||||||| |||||||||| |||  ||| || ||||||||||||||||||||    
T  30726652 ggtgaagattggagagaaattgagaattttgaatgtttttttgtaaatgggaggttgtggttctgcgttctagttatgtccagatttcctcggcagttaa 30726751  T
Q  300 ct 301  Q
    ||    
T  30726752 ct 30726753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 55407499 - 55407731
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnna- 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||               
T  55407499 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaattttttttttt 55407598  T
Q  100 ---aaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatgg 196  Q
       ||||| ||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  55407599 tttaaaataaacctaaacaaactaacattatcattaaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgg 55407698  T
Q  197 atttggtgaagatttgagagaaattgagaattt 229  Q
     ||||||||||||| ||||||||||||||||||    
T  55407699 ttttggtgaagattggagagaaattgagaattt 55407731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 67952 - 67725
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||| |||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||||||||         ||    
T  67952 tacatttatttatcaattcataaactacacatgcaatcattaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaattttttttaaa 67853  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| |||||||   |||||||||||||| |||||||||||||||||||||||  ||||||| |||||||||||||||||||  |||    
T  67852 aaataaacctaaacaaactaacatttc-attaaaatgattgatacaacttacttgtgataatgtgcggttgattttcttgcaattcgtgaaaatgacttt 67754  T
Q  201 ggtgaagatttgagagaaattgagaattt 229  Q
    |||||||||||||||||||||||||||||    
T  67753 ggtgaagatttgagagaaattgagaattt 67725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 50901841 - 50901620
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||||         ||    
T  50901841 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgtaaactactctaa-ttttttttaa 50901743  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| ||||||||  ||||||||||||||  ||||||||||||||||||||||  ||||||||||||||||||  | ||||||||||    
T  50901742 aaataaacctaaacaaactaacattatcattaaaatgattgatgcaacttacttgtgataatgtgcgattgatttgcttgcaattcacggaaatggattt 50901643  T
Q  201 ggtgaagatttgagagaaattga 223  Q
    |||||| |||| |||||| ||||    
T  50901642 ggtgaaaatttaagagaatttga 50901620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 51683563 - 51683337
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa--nnnnnnnnn 98  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||               
T  51683563 tacattcatttatcaattcataaaatacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaattttttttttt 51683464  T
Q  99 aaaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggat 198  Q
    |||||| ||| |||||||| ||||||||  |||||||||||||| | |||||||||||||||||||| | |||||||||||||||||||||||||||| |    
T  51683463 aaaaataaacctaaacaaactaacattatcattaaaatgattgatataacttacttgtgataatgtgtagttgatttgcttgcaattcgtgaaaatgg-t 51683365  T
Q  199 ttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||||| || |||| |||||||    
T  51683364 ttggtgaagattggaaagaatttgagaa 51683337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 48256283 - 48256509
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa-nnnnnnnnna 99  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||          |    
T  48256283 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaattaaccctaaccacatgcaaactactctaattttttttaaa 48256382  T
Q  100 aaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatt 199  Q
    ||||| ||| ||| |||| ||| ||||  |||||||||||||| |||| ||||||||||||||||||| |||||||| ||||||||||||||||||| ||    
T  48256383 aaaataaacctaagcaaactaatattatcattaaaatgattgatacaatttacttgtgataatgtgcagttgatttgtttgcaattcgtgaaaatggctt 48256482  T
Q  200 tggtgaagatttgagagaaattgagaa 226  Q
    ||||||||||| || |||| |||||||    
T  48256483 tggtgaagattggaaagaatttgagaa 48256509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 270 - 402
Target Start/End: Complemental strand, 30723187 - 30723055
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggc 369  Q
    |||||||||||||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  30723187 tgtttaagttcagatttcctcggcagttaattgccgtcggtttcctaaaaacttcggtagcaaactaccgaagggcattttcgtattttactcgtgtggc 30723088  T
Q  370 acaaccaaacaaaatgtgggaacatcaattctc 402  Q
    ||| |||||||| ||||||||||| ||||||||    
T  30723087 acagccaaacaacatgtgggaacagcaattctc 30723055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 99 - 301
Target Start/End: Complemental strand, 8109656 - 8109452
Alignment:
Q  99 aaaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggat 198  Q
    |||||| ||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  8109656 aaaaataaacctaaacaaactaacattatcattaaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgaat 8109557  T
Q  199 ttggtgaagatttgagagaaattgagaa-tttaga-aagttttttggaaatggga---ggttctggttctgcgatctgtttaagttcagatttcctcggc 293  Q
    |||||||||||| ||||||||||||||| |||||| |||  ||||| |||||| |   | ||||| ||||||| |||||||| |||||||||||||| ||    
T  8109556 ttggtgaagattggagagaaattgagaactttagagaag--ttttgaaaatggtatatgtttctgtttctgcg-tctgtttatgttcagatttcctcagc 8109460  T
Q  294 agttaact 301  Q
    ||||||||    
T  8109459 agttaact 8109452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 285 - 402
Target Start/End: Original strand, 49169119 - 49169236
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaat 384  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||| ||    
T  49169119 ttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaaggacattttcgtattttactcgtgtggcacagccaaacaacat 49169218  T
Q  385 gtgggaacatcaattctc 402  Q
    ||||||||| ||||||||    
T  49169219 gtgggaacagcaattctc 49169236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 284 - 404
Target Start/End: Complemental strand, 37563117 - 37562997
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||| |    
T  37563117 tttcctcggcagttaattgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtgacacagccaaacaaca 37563018  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  37563017 tgtgggaacagcaattctcaa 37562997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 31425339 - 31425458
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||| |    
T  31425339 tttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaaggacattttcgtattttactcgtgtggcacagccaaacaaca 31425438  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||||||||    
T  31425439 tgtgggaacaacaattctca 31425458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 54633864 - 54633746
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||| |    
T  54633864 tttcctcggcagttaactgccgccggtttcctaaaaccttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagtcaaacaaca 54633765  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  54633764 tgtgggaacagcaattctc 54633746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 1089605 - 1089723
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||| || | |    
T  1089605 tttcctcggcatttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccatactata 1089704  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  1089705 tgtgggaacaacaattctc 1089723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 284 - 391
Target Start/End: Original strand, 40358301 - 40358408
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||| |    
T  40358301 tttcctcggcagttaactgccgccggtttccaaaaaacttcggtagcaaactgtcgaagggcattttcgtattttactcgtgtggcacagccaaacaaca 40358400  T
Q  384 tgtgggaa 391  Q
    ||||||||    
T  40358401 tgtgggaa 40358408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 289 - 404
Target Start/End: Original strand, 49096378 - 49096492
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| | ||||||    
T  49096378 tcggcagttaactgccgccagtt-cctaaaaacctcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacaaccaaactatatgtgg 49096476  T
Q  389 gaacatcaattctcaa 404  Q
    ||||| ||||||||||    
T  49096477 gaacagcaattctcaa 49096492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 283 - 404
Target Start/End: Complemental strand, 1087913 - 1087792
Alignment:
Q  283 atttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaa 382  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||| ||| || |     
T  1087913 atttcctcggcagttaactgccgccgatttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactgatgtggcacagccatactat 1087814  T
Q  383 atgtgggaacatcaattctcaa 404  Q
    ||||||||||| ||||||||||    
T  1087813 atgtgggaacagcaattctcaa 1087792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 37021795 - 37021883
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa 89  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  37021795 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaactctaaccacatacaaactactctaa 37021883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 284 - 398
Target Start/End: Complemental strand, 49563892 - 49563778
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||| |    
T  49563892 tttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaaca 49563793  T
Q  384 tgtgggaacatcaat 398  Q
    ||||  |||||||||    
T  49563792 tgtgcaaacatcaat 49563778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 403 - 484
Target Start/End: Original strand, 51536090 - 51536171
Alignment:
Q  403 aacaatcaaagcggtcacaattcacaacggaatgagtgaggtatggtcgaagtcatagttttaaacatgatcttaattatta 484  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||    
T  51536090 aacaatcaaagcggtcacaattcacaacggaatgagtgaggtatggttgaagtcatagttttaaacatgattttaattatta 51536171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 21538174 - 21538377
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| |||||||| ||||||||  ||||||||||||||     || |||||||||||||| ||||||||| ||          ||    
T  21538174 tacattcatttatcaattcataaactacccatgcaatgttcaaattgtcaattcattcataaaccctaaccacatgcaaactact-tatatttttaaaaa 21538272  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    || | ||  |||||||| ||||||||  ||||||||||||||  |||||||||||||||||||||   |||||||||||||||||||||||||||| |||    
T  21538273 aacttaaactaaacaaactaacattatgattaaaatgattgatgcaacttacttgtgataatgtgtggttgatttgcttgcaattcgtgaaaatggcttt 21538372  T
Q  201 ggtga 205  Q
    |||||    
T  21538373 ggtga 21538377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 160 - 305
Target Start/End: Original strand, 37021933 - 37022077
Alignment:
Q  160 aatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctgg 259  Q
    |||||||| ||||||||||||| ||||||||||||| |||||||||||||| |||||||||||  || || ||||   |||||||||||| | |||||||    
T  37021933 aatgtgcagttgatttgcttgctattcgtgaaaatgaatttggtgaagattggagagaaattgttaaatttgaaaaagttttggaaatggaaagttctgg 37022032  T
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccg 305  Q
    ||||||||  || |||||| ||||||| ||||||||||||||||||    
T  37022033 ttctgcga-atgattaagtccagattttctcggcagttaactgccg 37022077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 26792265 - 26792385
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||| ||||||||||||| ||  || ||||||| |||||||  ||| ||||||||||||||||| |||||| |||    
T  26792265 tttcctcggcagttaactgccgccggtttactaaaaacttcggcagttaattgccgaagggcatttgagtaatttactcgtgtggcacagccaaaccaaa 26792364  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  26792365 tgtgggaacaacaattctcaa 26792385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 41800958 - 41801076
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||| ||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| | ||||||  ||||||||||||||| |||| ||| || | |    
T  41800958 tttcttcggcagctaactgccgccggtttccttaaaacttcggtagcaaactgccgaatgacattttaatattttactcgtgtgacacagccatactata 41801057  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  41801058 tgtgggaacagcaattctc 41801076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 283 - 404
Target Start/End: Complemental strand, 31242269 - 31242148
Alignment:
Q  283 atttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaa 382  Q
    ||||||||||||||||||||||||| |||| ||||||||||||| ||  |||||||||| |||||||  ||| |||||||||||||||||  ||||  ||    
T  31242269 atttcctcggcagttaactgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttgagtaatttactcgtgtggcacagtcaaatcaa 31242170  T
Q  383 atgtgggaacatcaattctcaa 404  Q
    ||||||| ||| ||||||||||    
T  31242169 atgtgggcacagcaattctcaa 31242148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 289 - 402
Target Start/End: Complemental strand, 41793377 - 41793265
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||| ||||||| ||||| ||||||| ||||||||||||||||||  |||||||| ||||||||||||| ||||||| |||||| | ||||||    
T  41793377 tcggcagttaattgccgccggtttc-taaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtatggcacagccaaactatatgtgg 41793279  T
Q  389 gaacatcaattctc 402  Q
    ||||| ||||||||    
T  41793278 gaacagcaattctc 41793265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 46436605 - 46436410
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||| |||| |||||||| ||| | |||||||||| ||         ||    
T  46436605 tacattcgtttattaattcataaactacacatgcaatcatcaaattgtcaattttaaaattaaccctaa-cacgtgcaaactactcaaaaaaaaattaaa 46436507  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatgga 197  Q
    || | ||| |||||||| ||||||||| |||  ||||||| |    |||||||||||||||||||    ||||| ||||||||||||||||||||||    
T  46436506 aacttaacctaaacaaactaacattaacattgcaatgattaatggtacttacttgtgataatgtggggatgattggcttgcaattcgtgaaaatgga 46436410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 54634036 - 54634156
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||   ||| ||||| ||||||| ||||  |||||||||||||||| ||| || | |    
T  54634036 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccata 54634135  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  54634136 tgtgggaacagcaattctcaa 54634156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 55799589 - 55799700
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||| |||||||||||||  |||||||||||| ||||||||||||||  |   |||||||| ||||||||||||||||||||| |||||||| ||||||    
T  55799589 tcggctgttaactgccgccgatttcctaaaaacctcggtagcaaactgagg---ggcattttggtattttactcgtgtggcacagccaaacaacatgtgg 55799685  T
Q  389 gaacatcaattctca 403  Q
    ||||| |||||||||    
T  55799686 gaacaacaattctca 55799700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 52529265 - 52529146
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||   ||| ||||| ||||||| ||||  |||||||||||||||| ||| || | |    
T  52529265 tttcctcggcagttaactgccgccgatttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccata 52529166  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||||||||    
T  52529165 tgtgggaacagcaattctca 52529146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 30726762 - 30726880
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| |||||||||||| ||||| ||   ||| ||||| | ||||| |||||||||||||||||||||| ||| || | |    
T  30726762 tttcctcggcagttaactgctgccggtttcctaaaaatttcggcagtttactaccgaaggacatttccgtattttactcgtgtggcacatccatactata 30726861  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  30726862 tgtgggaacagcaattctc 30726880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 260 - 402
Target Start/End: Complemental strand, 49090522 - 49090381
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtatttta 359  Q
    ||||||| |||| ||| |||||| ||||||||| ||||  |||||||| |||  || |||||||||| ||  |||||||||| |||||||| ||||||||    
T  49090522 ttctgcgttctggttatgttcag-tttcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaagggcattttggtatttta 49090424  T
Q  360 ctcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    ||||||||||||| ||| || | ||||||||||| ||||||||    
T  49090423 ctcgtgtggcacagccatactatatgtgggaacagcaattctc 49090381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 11083728 - 11083923
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||| | ||||||||||||||||| |||||||||||||||     || |||||||||||||| |||||||||| ||         ||    
T  11083728 tacattcatttatcaatacataaactacacatgcaatgatcaaattgtcaattcattcataaaccctaaccacatgcaaactactc-aattttttttcaa 11083826  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatgga 197  Q
    || | ||| |||||||| ||||||||| |||  ||||||| |    |||||||||||||||||||    ||||| ||||||||||||||||||||||    
T  11083827 aacttaacctaaacaaactaacattaagattgcaatgattaatggtacttacttgtgataatgtggggatgattggcttgcaattcgtgaaaatgga 11083923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 289 - 398
Target Start/End: Complemental strand, 6175890 - 6175785
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    |||||||||||||||||     |||| |||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||| | ||||||    
T  6175890 tcggcagttaactgccgg----ttcccaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtgg 6175795  T
Q  389 gaacatcaat 398  Q
    ||||| ||||    
T  6175794 gaacaacaat 6175785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 286 - 402
Target Start/End: Original strand, 13182121 - 13182237
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||  |||||||| |||| || |||||||||  ||  ||||||||||||||||||| ||||||||||||||||||||| ||| || | |||    
T  13182121 tcctcggtagtttgctgccgccggtttactcaaaacttcgacagttaactgccgaaaggcattttggtattttactcgtgtggcacagccatactatatg 13182220  T
Q  386 tgggaacatcaattctc 402  Q
    |||||||| ||||||||    
T  13182221 tgggaacaacaattctc 13182237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 286 - 402
Target Start/End: Complemental strand, 31421756 - 31421640
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||| |||||||| |||  ||||||||||||| ||  |||||||||| ||||||||||||||||||| |||||||||| ||| || | |||    
T  31421756 tcctcggtagttagctgccgccggttcactaaaaacttcggcagttaactgccgaagggcattttcgtattttactggtgtggcacagccatactatatg 31421657  T
Q  386 tgggaacatcaattctc 402  Q
    || ||||| ||||||||    
T  31421656 tgagaacagcaattctc 31421640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 3408261 - 3408379
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||| |  ||||| ||||| ||   |||| |||| |||||||  ||| ||||||||||||| |||||||||| |||    
T  3408261 tttcctcggcagttaactgccgccggttgcacaaaaatttcggcagtttactgtcgaagggcatttgagtaatttactcgtgtggtacaaccaaaccaaa 3408360  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  3408361 tgtgggaacaacaattctc 3408379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 37563301 - 37563419
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||   ||| ||||| ||||||| ||||  |||||||||||||||| ||  || | |    
T  37563301 tttcctcggcagttaactgccgccggtttcctaaaaacttcgacagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccttaccata 37563400  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  37563401 tgtgggaacagcaattctc 37563419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 309 - 403
Target Start/End: Complemental strand, 40352393 - 40352299
Alignment:
Q  309 gtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctca 403  Q
    |||||||||||||||||| ||   ||| |||||  ||||||||||||||||||||||||||||||||| || | ||||||||||| |||||||||    
T  40352393 gtttcctaaaaacttcggcagtttactaccgaagagcattttcgtattttactcgtgtggcacaaccatactatatgtgggaacaacaattctca 40352299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 300 - 401
Target Start/End: Original strand, 1309151 - 1309252
Alignment:
Q  300 ctgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaatt 399  Q
    |||||||| |||| || |||||||||| ||  |||||||||| |||||||| ||||||||||||||||||||||||| || | |||||||| || |||||    
T  1309151 ctgccgccggtttactcaaaacttcggcagttaactgccgaagggcatttttgtattttactcgtgtggcacaaccatactatatgtgggagcagcaatt 1309250  T
Q  400 ct 401  Q
    ||    
T  1309251 ct 1309252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 286 - 403
Target Start/End: Original strand, 6181814 - 6181931
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||  |||||||| |||  || |||||||||| ||  |||||||||| |||||||| ||||||||||||||||||||| ||| || | |||    
T  6181814 tcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatg 6181913  T
Q  386 tgggaacatcaattctca 403  Q
    |||||||| |||||||||    
T  6181914 tgggaacaacaattctca 6181931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 260 - 404
Target Start/End: Complemental strand, 49165137 - 49164995
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtatttta 359  Q
    ||||||| |||| ||| |||||  ||||||||| ||| | |||||||| |||  | | |||||||| |||  |||||| |||||||||||||||||||||    
T  49165137 ttctgcgttctggttatgttcaattttcctcggtagtaagctgccgccggttcacaacaaacttcgatagttaactgcggaaaggcattttcgtatttta 49165038  T
Q  360 ctcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaa 404  Q
    ||||||||||||||||| ||   || |||||||| ||||||||||    
T  49165037 ctcgtgtggcacaaccatac--tatatgggaacagcaattctcaa 49164995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 286 - 402
Target Start/End: Complemental strand, 13173284 - 13173168
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||  |||||||| ||||  | |||||||||| ||  ||||| |||| |||||||| ||||||||||||||||||||| ||| || | |||    
T  13173284 tcctcggtagtttgctgccgccggtttaatcaaaacttcggcagttaactgtcgaagggcattttggtattttactcgtgtggcacagccatactatatg 13173185  T
Q  386 tgggaacatcaattctc 402  Q
    |||||||||||||||||    
T  13173184 tgggaacatcaattctc 13173168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 21022909 - 21023027
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||| ||  |||||||||  |||||||  ||| ||||||||||||||||| |||||| |||    
T  21022909 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaa 21023007  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||||||||    
T  21023008 tgtgggaacagcaattctca 21023027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 286 - 403
Target Start/End: Original strand, 9893287 - 9893404
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||| | ||||||||  ||| ||||||||||| | ||  |||||||||| ||||||||||||||||||| |||||||||| ||| || | |||    
T  9893287 tcctcggtagtaagctgccgccgatttactaaaaacttcagcagttaactgccgaagggcattttcgtattttacttgtgtggcacagccatactatatg 9893386  T
Q  386 tgggaacatcaattctca 403  Q
    |||||||| |||| ||||    
T  9893387 tgggaacagcaatcctca 9893404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 10753149 - 10753312
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||||||||     || |||||||||||||| ||||||||||  |         ||    
T  10753149 tacattcatttatcaattcataaactacacatgcaatgttcaaattgtcaattcattcataaaccctaaccacatgcaaactactcatattttttaaaaa 10753248  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtg 165  Q
    |  | ||| |||||||| ||||||||  ||||||||||||||  |||||||||||| ||||||||    
T  10753249 acttaaac-taaacaaactaacattatgattaaaatgattgatgcaacttacttgtcataatgtg 10753312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 10966918 - 10967081
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| |||||||||||||||||  ||||||||||||||     || |||||||||||||| ||||||||||  |         ||    
T  10966918 tacattcatttatcaattcataaactacacatgcaatgttcaaattgtcaattcattcataaaccctaaccacatgcaaactactcatattttttaaaaa 10967017  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtg 165  Q
    |  | ||| |||||||| ||||||||  ||||||||||||||  |||||||||||| ||||||||    
T  10967018 acttaaac-taaacaaactaacattatgattaaaatgattgatgcaacttacttgtcataatgtg 10967081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 14315735 - 14315540
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||||||     || || ||||||||||| |||||||||| ||         ||    
T  14315735 tacattcatttatcaattcataaactacacatgcaatgatgaaattgtcaattcattcataaaacctaaccacatgcaaactactc-aaaaaatttcaaa 14315637  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatgga 197  Q
    || | ||| |||||||| ||||||||| |||  ||||||| |    ||||||||| |||||||||    ||||| ||||||||||||||||||||||    
T  14315636 aacttaacctaaacaaactaacattaagattgcaatgattaatggtacttacttgggataatgtggggatgattggcttgcaattcgtgaaaatgga 14315540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 4720080 - 4720163
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactac 84  Q
    |||||||||||| |||||| ||||||||||| |||||||||||| |||||||| | |  | |||||||||||||| ||||||||    
T  4720080 tacattcatttaccaattcataaactacacacgcaatcatcaaaatgtcaattcttacgtaaaccctaaccacatgcaaactac 4720163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 14201551 - 14201667
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| ||||| |||    ||||| ||  |||||||||  |||||||  ||| ||||||||||||||| | |||||| |||    
T  14201551 tttcctcggcagttaactgcagccggtttcataa----ttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaa 14201646  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  14201647 tgtgggaacagcaattctcaa 14201667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 375
Target Start/End: Original strand, 16473701 - 16473791
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaacc 375  Q
    ||||||||| |||||||||||||| |||| |||||| |||||| ||  |||||||||| ||||||||||||   ||||||||||||||||||    
T  16473701 tttcctcggtagttaactgccgccggtttactaaaa-cttcggcagttaactgccgaagggcattttcgtaaagtactcgtgtggcacaacc 16473791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 26932636 - 26932518
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||| ||||| |||  ||||||||||||| ||   ||| ||||| | |||||  ||| |||||||||||| |||| |||||| | |    
T  26932636 tttcctcggcagttaactaccgccggttgtctaaaaacttcggcagtttactaccgaaggacatttgagtaatttactcgtgtgacacagccaaactata 26932537  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  26932536 tgtgggaacagcaattctc 26932518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 284 - 393
Target Start/End: Original strand, 49566470 - 49566580
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaa 382  Q
    ||||||||| |||||||||||||| ||||||||||||| |||| ||  ||||||||| | || |||| ||||  ||||| |||||||||||||| || |     
T  49566470 tttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacaaccatactat 49566569  T
Q  383 atgtgggaaca 393  Q
    |||||||||||    
T  49566570 atgtgggaaca 49566580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 14297486 - 14297401
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactc 86  Q
    ||||||||||||||||||| ||||||||||||||||| || ||||||||||||     || || ||||||||||| ||||||||||    
T  14297486 tacattcatttatcaattcataaactacacatgcaatgatgaaattgtcaattcattcataaaacctaaccacatgcaaactactc 14297401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 279 - 372
Target Start/End: Complemental strand, 44795116 - 44795024
Alignment:
Q  279 tcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcaca 372  Q
    |||||||| |||||||||| |||||||||||||| || |||||||||| ||  |||||||||| ||||||||||||   ||||||||| |||||    
T  44795116 tcagattttctcggcagtttactgccgccagtttact-aaaacttcggcagttaactgccgaatggcattttcgtaaagtactcgtgtagcaca 44795024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 46253535 - 46253421
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| ||||| |||    ||||| ||  |||||||||  |||||||  ||| |||||||||||||||||||||||| | |    
T  46253535 tttcctcggcagttaactgcagccggtttcataa----ttcggcagttaactgccgatgggcatttgagtaatttactcgtgtggcacaaccaaactata 46253440  T
Q  384 tgtgggaacatcaattctc 402  Q
    ||||||||||  |||||||    
T  46253439 tgtgggaacagtaattctc 46253421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 55587407 - 55587293
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| ||||| |||    ||||| ||  |||||||||| |||||||  |||  |||||||||||||| | |||||| |||    
T  55587407 tttcctcggcagttaactgcagccggtttcataa----ttcggcagttaactgccgaagggcatttgggtaaattactcgtgtggcatagccaaaccaaa 55587312  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  55587311 tgtgggaacaacaattctc 55587293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 55588308 - 55588422
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| ||||| |||    ||||| ||  |||||||||| |||||||  |||  |||||||||||||| | |||||| |||    
T  55588308 tttcctcggcagttaactgcagccggtttcataa----ttcggcagttaactgccgaagggcatttgggtaaattactcgtgtggcatagccaaaccaaa 55588403  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  55588404 tgtgggaacagcaattctc 55588422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 405
Target Start/End: Original strand, 23221691 - 23221808
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| ||||| |||    ||||| ||  |||||||||| |||||||   ||  |||||||||||||| | |||||| |||    
T  23221691 tttcctcggcagttaactgcagccggtttcataa----ttcggcagttaactgccgaagggcatttgaataaattactcgtgtggcatagccaaaccaaa 23221786  T
Q  384 tgtgggaacatcaattctcaac 405  Q
    |||||||||| |||||||||||    
T  23221787 tgtgggaacaacaattctcaac 23221808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 368
Target Start/End: Original strand, 28235582 - 28235665
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtgg 368  Q
    |||||||||||||||||||||||| |||| || |||||||||| ||  |||||||||| ||||||||||||   |||||||||||    
T  28235582 tttcctcggcagttaactgccgccggtttact-aaaacttcggcagttaactgccgaagggcattttcgtaaaatactcgtgtgg 28235665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 372
Target Start/End: Complemental strand, 39773456 - 39773368
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcaca 372  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||   ||| ||||| | ||||| ||||  ||||||||||||||||    
T  39773456 tttcctcggcagttaactgctgccggtttcctaaaaacttcggcagtttactaccgaaggacatttccgtaacttactcgtgtggcaca 39773368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 51037489 - 51037608
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||| ||| |||   || |||||| |||||| ||  |||||||||  | |||||  ||| ||||||||||||||||| |||||| |||    
T  51037489 tttcctcggcagttaattgcagccgtatttctaaaa-cttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcacagccaaactaaa 51037587  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  51037588 tgtgggaacaacaattctcaa 51037608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 352 - 402
Target Start/End: Original strand, 39773630 - 39773680
Alignment:
Q  352 gtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    ||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  39773630 gtattttactcgtgtggcacagccaaacaacatgtgggaacagcaattctc 39773680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 405
Target Start/End: Complemental strand, 23220730 - 23220610
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||| ||||||||||||||| |||   || |||||| |||||| ||  ||||||| || || ||||  ||| ||||||||||||||||| |||||| |||    
T  23220730 tttcatcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccaaagggtatttgagtaatttactcgtgtggcacagccaaaccaaa 23220632  T
Q  384 tgtgggaacatcaattctcaac 405  Q
     ||||||||| |||||||||||    
T  23220631 agtgggaacaacaattctcaac 23220610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 357 - 403
Target Start/End: Complemental strand, 7484710 - 7484664
Alignment:
Q  357 ttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctca 403  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||    
T  7484710 ttactcgtgtggcatagccaaaccaaatgtgggaacatcaattctca 7484664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 356 - 402
Target Start/End: Original strand, 29307554 - 29307600
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||||||||||||||||| ||||||| ||||| ||||||||    
T  29307554 tttactcgtgtggcacaaccaaaccaaatgtgagaacaacaattctc 29307600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 40833631 - 40833748
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||| ||  |||||||||  || ||||  ||| ||||||||||||||||| |||||  |||    
T  40833631 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaagtaaa 40833729  T
Q  384 tgtgggaacatcaattctc 402  Q
     ||||||||| ||||||||    
T  40833730 agtgggaacaacaattctc 40833748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 38368280 - 38368166
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| ||||| |||    ||||| ||  |||||||||| | |||||   ||  |||||||||||||| | |||||| |||    
T  38368280 tttcctcggcagttaactgcagccggtttcataa----ttcggcagttaactgccgaaggacatttggataaattactcgtgtggcatagccaaactaaa 38368185  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  38368184 tgtgggaacaacaattctc 38368166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 356 - 405
Target Start/End: Complemental strand, 40832627 - 40832578
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaac 405  Q
    ||||||||||||||| | |||||| ||||||||||||| |||||||||||    
T  40832627 tttactcgtgtggcatagccaaaccaaatgtgggaacagcaattctcaac 40832578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 38369203 - 38369322
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || || |||||||||| ||  |||||||||| || ||||  ||| ||||||||| ||||||| |||||| |||    
T  38369203 tttcctcggcagttaactgcagccgtatttct-aaaacttcggcagttaactgccgaagggtatttgagtaatttactcgtatggcacagccaaaccaaa 38369301  T
Q  384 tgtgggaacatcaattctcaa 404  Q
     ||| ||| | ||||||||||    
T  38369302 agtgagaatagcaattctcaa 38369322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 545 - 589
Target Start/End: Original strand, 46363884 - 46363927
Alignment:
Q  545 tagtgatatatgtacaactctttggtaacaactttggttttctct 589  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||    
T  46363884 tagtgatctatgtacaactctttggt-acaactttggttttctct 46363927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 301
Target Start/End: Original strand, 31425299 - 31425330
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||||||||||||||||||||||||||||    
T  31425299 tgtttaagttcagatttcctcggcagttaact 31425330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 195
Target Start/End: Original strand, 41933363 - 41933527
Alignment:
Q  29 acatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaaaaatcaacataaacaaattaacattaat 128  Q
    |||||||||||||||| | ||||||   | |||||||||| |||||| |||||||||| ||         |||| | ||| |||||||| |||||||||     
T  41933363 acatgcaatcatcaaaatatcaattcctacatcaaccctatccacatgcaaactactc-aattttttaaaaaaacttaacctaaacaaactaacattaag 41933461  T
Q  129 attaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatg 195  Q
    |||| | ||||| |  | ||||||||||||||||||| |  ||| |||||||||| |||||||||||    
T  41933462 attacattgattaattctacttacttgtgataatgtggagatga-ttgcttgcaaatcgtgaaaatg 41933527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 301
Target Start/End: Original strand, 49169078 - 49169109
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||||||||||||||||||||||||||||    
T  49169078 tgtttaagttcagatttcctcggcagttaact 49169109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 7485729 - 7485799
Alignment:
Q  332 aactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||  |||||||  |||  |||||||||||||| | |||||| ||||||||||||| ||||||||    
T  7485729 aactgccgaggggcatttgggtaaattactcgtgtggcatagccaaaccaaatgtgggaacaacaattctc 7485799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 402
Target Start/End: Original strand, 26933358 - 26933404
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||||||||||||||||| | | ||| ||||||||||||||    
T  26933358 tttactcgtgtggcacaaccaaactacacgtgcgaacatcaattctc 26933404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 40354768 - 40354706
Alignment:
Q  169 ttgatttgcttgcaattcgt-gaaa-atggatttggtgaagatttgagagaaattgagaattt 229  Q
    |||||||||||||||||||| |||| | | |||||| ||||||| ||||||||||||||||||    
T  40354768 ttgatttgcttgcaattcgtagaaagaagtatttggcgaagattggagagaaattgagaattt 40354706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 326
Target Start/End: Complemental strand, 41793416 - 41793374
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcgg 326  Q
    ||||||||||| |||||||||||| || |||||||||||||||    
T  41793416 tttcctcggcacttaactgccgccggtgtcctaaaaacttcgg 41793374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 6178309 - 6178252
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| |||||||||||||   || |||| ||||||||||||||| |||||||    
T  6178309 ttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaa 6178252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 6181762 - 6181807
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccg 305  Q
    ||||||| |||| ||| |||||| ||||||||||||||||||||||    
T  6181762 ttctgcgttctggttatgttcagttttcctcggcagttaactgccg 6181807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 403
Target Start/End: Complemental strand, 37394234 - 37394181
Alignment:
Q  350 tcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctca 403  Q
    |||||||||||| |||||||||||||| |  |||||||||||||  ||||||||    
T  37394234 tcgtattttactagtgtggcacaaccatatcaaatgtgggaacagtaattctca 37394181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 41795555 - 41795498
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| |||||||||||||   || |||| ||||||||||||||| |||||||    
T  41795555 ttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaa 41795498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 41800908 - 41800949
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||| |||| ||| |||||||||||||||||||||||||    
T  41800908 ttctgcgttctggttatgttcagatttcctcggcagttaact 41800949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 49093958 - 49094015
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| |||||||||||||   || |||| ||||||||||||||| |||||||    
T  49093958 ttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaa 49094015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 106 - 138
Target Start/End: Original strand, 1308563 - 1308595
Alignment:
Q  106 aacataaacaaattaacattaatattaaaatga 138  Q
    |||||||||||||||||||||| ||||||||||    
T  1308563 aacataaacaaattaacattaacattaaaatga 1308595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 404
Target Start/End: Complemental strand, 21015720 - 21015672
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaa 404  Q
    ||||||||| |||||||||||||| |||| || ||||| ||||||||||    
T  21015720 tttactcgtatggcacaaccaaaccaaatatgagaacaacaattctcaa 21015672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 350 - 402
Target Start/End: Complemental strand, 56138233 - 56138181
Alignment:
Q  350 tcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||||| |||||||||||||  |  ||||||||||||| ||||||||    
T  56138233 tcgtattttactagtgtggcacaaccttatcaaatgtgggaacagcaattctc 56138181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 372
Target Start/End: Complemental strand, 56565809 - 56565722
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcaca 372  Q
    |||||||||||||||||||||||| |||| || |||||||||  ||  |||||| |||  | |||||||||   |||||||||||||||    
T  56565809 tttcctcggcagttaactgccgccggtttact-aaaacttcgacagttaactgctgaagagaattttcgtaaactactcgtgtggcaca 56565722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 94)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 3501604 - 3501907
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnn-- 98  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||               
T  3501604 tacattcaattatcaatttctaaactacacatgcaatcatcaaattctcaattttgaaatcaaccctaaccacatacaaactactctaattttttttttt 3501703  T
Q  99 aaaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggat 198  Q
    |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3501704 aaaaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggat 3501803  T
Q  199 ttggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctc-ggcagtt 297  Q
    ||||||||||||  | ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||||    
T  3501804 ttggtgaagattgaaaagaaattgagaatttagaaggttttttggaaatgggaggttctggttctgcgttctggttatgttcagatttcctcgggcagtt 3501903  T
Q  298 aact 301  Q
    ||||    
T  3501904 aact 3501907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 50963315 - 50963019
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||         ||    
T  50963315 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaatttttttaaaa 50963216  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50963215 aaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtacacttgatttgcttgcaattcgtgaaaatggattt 50963116  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    |||||||||| |||||||||||||||||| |||| | ||||||||||||||     |||||||||| |||| || ||||||||||||||| |||||||||    
T  50963115 ggtgaagattggagagaaattgagaattttgaaattgttttggaaatggga----atggttctgcgttctggtttagttcagatttcctcagcagttaac 50963020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 1 - 402
Target Start/End: Complemental strand, 3976067 - 3975666
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||| ||  ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||         ||    
T  3976067 tacattcaattgccaatttctaaactacacatgcaatcatcaaattgtcaatttttaaatcaaccctaaccacatacaaactactctaatttttttaaaa 3975968  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||    
T  3975967 aaatcaacctaaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaagaagattt 3975868  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    |||||||||| |||| || ||| |||||| |  |  |||| | |||||||    ||| |||||||| |||| || |||||||||||||||||||||||||    
T  3975867 ggtgaagattggagaaaatttgtgaattttgtgaagttttggaaaatggggaagtctagttctgcgttctggtttagttcagatttcctcggcagttaac 3975768  T
Q  301 tgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattc 400  Q
    ||||||| |||| ||||||||||||  ||   ||||||||| ||||||||||||   ||||||||||||||| |||||| ||||||||| ||| ||||||    
T  3975767 tgccgccggtttactaaaaacttcgacagtttactgccgaagggcattttcgtaaagtactcgtgtggcacagccaaaccaaatgtgggtacaacaattc 3975668  T
Q  401 tc 402  Q
    ||    
T  3975667 tc 3975666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 180; E-Value: 7e-97
Query Start/End: Original strand, 1 - 303
Target Start/End: Complemental strand, 597119 - 596817
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||         ||    
T  597119 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaatatttaaatcaaccctaaccacatgcaaactactctaatttaaaaa-aa 597021  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  597020 aaatcaacctaaacaaattaacattatgattaaaatgattgacacaacttacttgtgataatgtgcaattgatttgcttgcaattcgtgaaaatggattt 596921  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaat-gggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaa 299  Q
    |||||||||| |||| |||||| |||||| |  |  |||| | |||| |||| |||||||||||||| |||| || ||||||||||||||||||||||||    
T  596920 ggtgaagattggagaaaaattgtgaattttgtgaagttttggaaaatggggaagttctggttctgcgttctggtttagttcagatttcctcggcagttaa 596821  T
Q  300 ctgc 303  Q
    ||||    
T  596820 ctgc 596817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 50216590 - 50216894
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||||||||         ||    
T  50216590 tacattcatttatcaattcctaaattacacatgcaatcatcaaattatcaattttaaaatcaaccctaaccacatgcaaactactctaatttaaaaataa 50216689  T
Q  101 aaa--tcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggat 198  Q
    |||  ||||| |||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  50216690 aaaaatcaacctaaacaaatttacattatcattaaaatgattgacacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatggat 50216789  T
Q  199 ttggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgg-gaggttctggttctgcgatctgtttaagttcagatttcctcggcagtt 297  Q
    |||||||||||| ||||||||||| |||||| |||  | ||||||||||||  |||||||||||||||| | || ||| |||||||||| ||||||||||    
T  50216790 ttggtgaagattggagagaaattgtgaattttgaatatgttttggaaatggaaaggttctggttctgcg-tatgattatgttcagattttctcggcagtt 50216888  T
Q  298 aactgc 303  Q
    ||||||    
T  50216889 aactgc 50216894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 4008035 - 4008335
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||         ||    
T  4008035 tacattcatttatcaattcctaaactacacatgcaatcatcgaattgtcaattttaaaatcaaccctaaccacatacaaactactctaattttttttaaa 4008134  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||   |||||    
T  4008135 aaatcaacctaaacaaattaacattatgattaaaatgattgacacaacttacttgtgataatgtgcagttgatttgcttgctattcgtgaaagaagattt 4008234  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaat-gggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaa 299  Q
    |||||||||| |||| || ||| |||||| |  |  |||| | |||| |||| | |||||||||||| |||| || ||||||||||||||||||||||||    
T  4008235 ggtgaagattggagaaaatttgtgaattttgtgaagttttggaaaatcgggaag-tctggttctgcgttctggtttagttcagatttcctcggcagttaa 4008333  T
Q  300 ct 301  Q
    ||    
T  4008334 ct 4008335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 157; E-Value: 4e-83
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 42165523 - 42165224
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||         ||    
T  42165523 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaa-ttttttttaa 42165425  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||  ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    ||||    
T  42165424 aaatcaacctaaacaaattaacattatgattaaaatgatggacacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaagaatattt 42165325  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    |||||||||| |||| || ||| |||||| |  |  |||| | |||||||    |||||||||||| |||| || |||||||||||||||||||||||||    
T  42165324 ggtgaagattggagaaaatttgtgaattttgtgaagttttggaaaatggggaagtctggttctgcgttctggtttagttcagatttcctcggcagttaac 42165225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 47073919 - 47074187
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnn-- 98  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||                
T  47073919 tacattcatttatcaattcctaaactacacatgcattcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctatttatttttttt 47074018  T
Q  99 aaaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggat 198  Q
    |||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||    
T  47074019 aaaaatcaacctaaacaaattaacattatcattaaaatgattgacacaacttacttgtgataatgtgcggttgatttgcttgctattcgtgaaaatggat 47074118  T
Q  199 ttggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcga 267  Q
    ||||||||||||  ||||||||||  || || |||| |||||||  ||||||| |||||| ||||||||    
T  47074119 ttggtgaagattgaagagaaattgttaaatttgaaatttttttgataatgggaagttctgattctgcga 47074187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 49196159 - 49196387
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||         ||    
T  49196159 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccttaaccacatgcaaactactctaatttttttttaa 49196258  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| ||||||||  |||||| ||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||  |||    
T  49196259 aaataaacctaaacaaactaacattatcattaaagtgattgatacaacttacttgtgataatgtgcagttgattttcttgcaattcgtgaaaatgacttt 49196358  T
Q  201 ggtgaagatttgagagaaattgagaattt 229  Q
    |||||||||| ||||||||||||||||||    
T  49196359 ggtgaagattagagagaaattgagaattt 49196387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 42756514 - 42756289
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||         ||    
T  42756514 tacatccatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaatttttttttaa 42756415  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| |||||||| ||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  42756414 aaataaacctaaacaaactaacattattattaaaatgattgatacaactgacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgacttt 42756315  T
Q  201 ggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| || |||| |||||||    
T  42756314 ggtgaagattggaaagaatttgagaa 42756289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 20917729 - 20917956
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||         ||    
T  20917729 tacattcatttatcaattcataaactatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaattttttttaaa 20917828  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| |||||| |  ||||| |||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||| |||    
T  20917829 aaataaacctaaacaaactaacat-atcattaagatgattgatacaacttacttgtgataatgtgcgattgatttgcttgcaattcgtgaaaatggcttt 20917927  T
Q  201 ggtgaagatttgagagaaattgagaattt 229  Q
    |||||||||| ||||||||||||||||||    
T  20917928 ggtgaagattggagagaaattgagaattt 20917956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 20926691 - 20926918
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||         ||    
T  20926691 tacattcatttatcaattcataaactatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaattttttttaaa 20926790  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| |||||| |  ||||| |||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||| |||    
T  20926791 aaataaacctaaacaaactaacat-atcattaagatgattgatacaacttacttgtgataatgtgcgattgatttgcttgcaattcgtgaaaatggcttt 20926889  T
Q  201 ggtgaagatttgagagaaattgagaattt 229  Q
    |||||||||| ||||||||||||||||||    
T  20926890 ggtgaagattggagagaaattgagaattt 20926918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 51807330 - 51807102
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| |||||||||||||         ||    
T  51807330 tacattcatttatcaatttctaaactacacatgcaatcatcaaattgtcaattttaaaatcaatcataaccacatgcaaactactctaatttttttttaa 51807231  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| | ||||||  |||||||||||||| ||||||||||||||||||||| || ||||||||||||||||| ||||||||   |||    
T  51807230 aaataaacctaaacaaactgacattatcattaaaatgattgatacaacttacttgtgataatgtacagttgatttgcttgcaatttgtgaaaataacttt 51807131  T
Q  201 ggtgaagatttgagagaaattgagaattt 229  Q
    |||||||||| ||||||||||| ||||||    
T  51807130 ggtgaagattggagagaaattgtgaattt 51807102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 226
Target Start/End: Original strand, 30255714 - 30255939
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||||||| ||||||  |||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||         ||    
T  30255714 tacattcatttagcaattcacaaactaaacatgcaatcatcaaattgtcaactttaaaatcaaccctaaccacatgcaaactactctaatttttttttaa 30255813  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| |||| |||  |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  30255814 aaataaacctaaacaaactaaccttatcattaaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgacttt 30255913  T
Q  201 ggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| || |||| |||||||    
T  30255914 ggtgaagattggaaagaatttgagaa 30255939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 1 - 196
Target Start/End: Complemental strand, 44230074 - 44229881
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||| |               
T  44230074 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctgattttttttt-- 44229977  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatgg 196  Q
    |||| ||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44229976 aaataaacctaaacaaactaacattatcattaaaatgattgatacaacttacttgtgataatgtgcaattgatttgcttgcaattcgtgaaaatgg 44229881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 48889104 - 48888872
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||               
T  48889104 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaattttttatttt 48889005  T
Q  101 -------aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaa 193  Q
           |||| ||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  48889004 tatttttaaataaacttaaacaaactaacattatcattaaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaa 48888905  T
Q  194 tggatttggtgaagatttgagagaaattgagaa 226  Q
    ||  ||||||||||||| || |||| |||||||    
T  48888904 tgactttggtgaagattggaaagaatttgagaa 48888872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 279 - 404
Target Start/End: Complemental strand, 9426688 - 9426563
Alignment:
Q  279 tcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaa 378  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  9426688 tcagatttcctcggcatttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggtacaaccaaa 9426589  T
Q  379 caaaatgtgggaacatcaattctcaa 404  Q
    ||| ||||||||||| ||||||||||    
T  9426588 caacatgtgggaacagcaattctcaa 9426563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 3501916 - 3502034
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||| |    
T  3501916 tttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcagtttcgtattttactcgtgtggcacaaccaaacaaca 3502015  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  3502016 tgtgggaacaacaattctc 3502034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 284 - 405
Target Start/End: Complemental strand, 46697763 - 46697642
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |    
T  46697763 tttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccaaacaaga 46697664  T
Q  384 tgtgggaacatcaattctcaac 405  Q
    |||||||||| |||||||||||    
T  46697663 tgtgggaacagcaattctcaac 46697642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 8 - 210
Target Start/End: Complemental strand, 48563297 - 48563094
Alignment:
Q  8 atttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnna-aaaatca 106  Q
    |||||||||||| || |||||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||           ||||| |    
T  48563297 atttatcaattcatagactacacatgcaatcatcaaattgtcaattttaaaatcaaccttaaccacatgcaaactactctaatttttttttttaaaataa 48563198  T
Q  107 acataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaa 206  Q
    || |||||||| ||||||||  |||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||| |||||||||  |||| ||||    
T  48563197 acctaaacaaactaacattatcattaaaatgattgatacaacttacttatgataatgtgcagttgatttgcttgcaatttgtgaaaatgattttgatgaa 48563098  T
Q  207 gatt 210  Q
    ||||    
T  48563097 gatt 48563094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 93; E-Value: 6e-45
Query Start/End: Original strand, 288 - 402
Target Start/End: Original strand, 1835352 - 1835463
Alignment:
Q  288 ctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtg 387  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||    
T  1835352 ctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaac---atgtg 1835448  T
Q  388 ggaacatcaattctc 402  Q
    |||||| ||||||||    
T  1835449 ggaacagcaattctc 1835463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 279 - 402
Target Start/End: Original strand, 2857972 - 2858095
Alignment:
Q  279 tcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaa 378  Q
    |||||| |||||||||||||||||||||| |||| ||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||| |||||    
T  2857972 tcagatatcctcggcagttaactgccgccggtttactaaatacttcggtagcaaactgccgaagggcgttttcgtattttactcgtgtggcacagccaaa 2858071  T
Q  379 caaaatgtgggaacatcaattctc 402  Q
    ||| ||||||||||| ||||||||    
T  2858072 caacatgtgggaacaacaattctc 2858095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 41844201 - 41844083
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| |    
T  41844201 tttcctcagcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcatttttgtattttactcgtgtggcacagccaaacaaca 41844102  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||| | ||||||||    
T  41844101 tgtgggaagagcaattctc 41844083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 35743603 - 35743720
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||||||||||||||||||  |||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| |    
T  35743603 tttcctcggcagttaactgccgccgatttcctaaa--cttcggtagcaaactgccgaatggcattttcgtattttactcgtgtggcacagccaaacaaca 35743700  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||||||||    
T  35743701 tgtgggaacagcaattctca 35743720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 3953236 - 3953355
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||| |    
T  3953236 tttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaaca 3953335  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||| ||||    
T  3953336 tgtgggaacagcaatactca 3953355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 284 - 404
Target Start/End: Complemental strand, 50477232 - 50477112
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||| | |||||||||||||||||| |||||||||  ||||||| |    
T  50477232 tttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgtcgaatgacattttcgtattttactcatgtggcacagtcaaacaaga 50477133  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  50477132 tgtgggaacaacaattctcaa 50477112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 8156560 - 8156441
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||| || || ||||| ||||||||||||||||||||| |||||||| |    
T  8156560 tttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccaaagggtattttggtattttactcgtgtggcacagccaaacaaca 8156461  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||| ||||    
T  8156460 tgtgggaacagcaatactca 8156441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 284 - 398
Target Start/End: Original strand, 6745347 - 6745461
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| |||||||| |    
T  6745347 tttccttggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaacaaca 6745446  T
Q  384 tgtgggaacatcaat 398  Q
    |||||||||| ||||    
T  6745447 tgtgggaacagcaat 6745461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 2967946 - 2968065
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||| ||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||| || | |    
T  2967946 tttcttcggcagctaactgccgccggtttccttaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacagccatactata 2968045  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||||||||    
T  2968046 tgtgggaacagcaattctca 2968065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 49144477 - 49144595
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| |||||||||||||||| |||| ||| || | |    
T  49144477 tttcttcggcagttaactgccgccggtttccttaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtgtgacacagccatactata 49144576  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  49144577 tgtgggaacagcaattctc 49144595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 284 - 398
Target Start/End: Complemental strand, 30943241 - 30943127
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||||||||||||||||| ||  |||||||||| |||| |  ||||| ||||||||||||||||||||| |||||||| |    
T  30943241 tttcctcggcagttaactgccgccagtttcctaaaaacctcaatagcaaactgtcgaaggatattttggtattttactcgtgtggcacagccaaacaaca 30943142  T
Q  384 tgtgggaacatcaat 398  Q
    |||||||||| ||||    
T  30943141 tgtgggaacagcaat 30943127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 284 - 398
Target Start/End: Original strand, 54392049 - 54392163
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||||| |||||||||||| || |||||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||| | |    
T  54392049 tttcctcggcacttaactgccgccggtgtcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagccaaactata 54392148  T
Q  384 tgtgggaacatcaat 398  Q
    |||||||||| ||||    
T  54392149 tgtgggaacagcaat 54392163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 260 - 403
Target Start/End: Complemental strand, 29008962 - 29008819
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtatttta 359  Q
    ||||||| |||| ||| |||||| ||||||||| ||| | |||||||| |||  ||| ||||||||||||  |||||||||| |||||||||||||||||    
T  29008962 ttctgcgttctggttatgttcagttttcctcggtagtaagctgccgccggttcactacaaacttcggtagttaactgccgaagggcattttcgtatttta 29008863  T
Q  360 ctcgtgtggcacaaccaaacaaaatgtgggaacatcaattctca 403  Q
    ||||||||||||| ||| || | ||||||||||| |||||||||    
T  29008862 ctcgtgtggcacagccatactatatgtgggaacaacaattctca 29008819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 2950379 - 2950266
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||| ||||||||||| ||| ||||||||| ||||||||||||||||||  |||||||| |||||||||||||||| ||||||||||| | ||||||    
T  2950379 tcggcaggtaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtgacacaaccaaactatatgtgg 2950281  T
Q  389 gaacatcaattctca 403  Q
    ||||| |||||||||    
T  2950280 gaacagcaattctca 2950266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 46406651 - 46406764
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||  |||||||| |||||||||||||||| |||| |||||| | ||||||    
T  46406651 tcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtgacacagccaaactatatgtgg 46406749  T
Q  389 gaacatcaattctca 403  Q
    ||||| |||||||||    
T  46406750 gaacagcaattctca 46406764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 49138627 - 49138514
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||  |||||||| ||||||||||| ||||||||| |||||| | ||||||    
T  49138627 tcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcatgtggcacagccaaactatatgtgg 49138529  T
Q  389 gaacatcaattctca 403  Q
    ||||| |||||||||    
T  49138528 gaacagcaattctca 49138514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 34051373 - 34051485
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||| ||| ||| ||||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||| | ||||||    
T  34051373 tcggcagttaactgctgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtgg 34051471  T
Q  389 gaacatcaattctc 402  Q
    ||||| ||||||||    
T  34051472 gaacagcaattctc 34051485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 42900224 - 42900110
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| |||| || |||||||| | ||  |||||||||| |||||||| ||||||||||||||||||||| |||||||| ||||||    
T  42900224 tcggcagttaactgccgccggtttactcaaaacttcagcagttaactgccgaagggcattttggtattttactcgtgtggcacagccaaacaacatgtgg 42900125  T
Q  389 gaacatcaattctca 403  Q
    ||||| ||| |||||    
T  42900124 gaacaacaactctca 42900110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 257 - 402
Target Start/End: Complemental strand, 1835229 - 1835084
Alignment:
Q  257 tggttctgcgatctgtttaagttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtatt 356  Q
    |||||||| | |||| ||| ||| || |||||||||||||||||||||||| |||||||||||||||||| ||   ||| ||||| ||||||| ||||      
T  1835229 tggttctgggttctggttatgttgagttttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaac 1835130  T
Q  357 ttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||||||||| ||| || | ||||||||||| ||||||||    
T  1835129 ttactcgtgtggcacagccataccatatgtgggaacagcaattctc 1835084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 300 - 404
Target Start/End: Complemental strand, 16444644 - 16444540
Alignment:
Q  300 ctgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaatt 399  Q
    |||||||| |||| || |||||||||| ||  |||||||||| |||||||| ||||||||||||||||||||||||| || | ||||||||||| |||||    
T  16444644 ctgccgccggtttactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacaaccatactatatgtgggaacagcaatt 16444545  T
Q  400 ctcaa 404  Q
    |||||    
T  16444544 ctcaa 16444540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 322 - 402
Target Start/End: Complemental strand, 25191935 - 25191855
Alignment:
Q  322 ttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| || ||||| ||||||||| | ||||||||    
T  25191935 ttcggtagcaaactgccgaagggcattttcgtattttactcgtgtggcacagccgaacaacatgtgggaagagcaattctc 25191855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 286 - 402
Target Start/End: Original strand, 42904205 - 42904321
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||| |||||||| |||  ||||||||||||| ||  |||||||||| ||||||||||||||||||| |||||||||| ||| || | |||    
T  42904205 tcctcgggagttagctgccgccggttcactaaaaacttcggcagttaactgccgaagggcattttcgtattttactggtgtggcacagccatactatatg 42904304  T
Q  386 tgggaacatcaattctc 402  Q
    |||||||| ||||||||    
T  42904305 tgggaacagcaattctc 42904321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 286 - 402
Target Start/End: Original strand, 50481406 - 50481522
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||| |||||||| |||  ||||||||||||| |   |||||||||| ||||||||||||||||||| |||||||||||||| || | |||    
T  50481406 tcctcggtagttagctgccgccggttcactaaaaacttcggcacttaactgccgaagggcattttcgtattttactggtgtggcacaaccatactatatg 50481505  T
Q  386 tgggaacatcaattctc 402  Q
    |||||||| ||||||||    
T  50481506 tgggaacagcaattctc 50481522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 260 - 402
Target Start/End: Complemental strand, 34045484 - 34045342
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtatttta 359  Q
    ||||||| |||| ||| | |||| ||||||||| ||||  |||||||| |||  || |||||||||| ||  |||||||||| |||||||| ||||||||    
T  34045484 ttctgcgttctggttatgatcagttttcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaagggcattttggtatttta 34045385  T
Q  360 ctcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    ||||||||||||| ||| || | ||||||||||| ||||||||    
T  34045384 ctcgtgtggcacagccatactatatgtgggaacagcaattctc 34045342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 255 - 404
Target Start/End: Complemental strand, 35743500 - 35743350
Alignment:
Q  255 tctggttctgcgatctgtttaagttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaa-aggcattttcgt 353  Q
    |||||||||||| |||| ||| |||||| |||||||||||||||||||||||| |||||||||||||||||| |    ||| |||||  ||||||| |||    
T  35743500 tctggttctgcgttctggttatgttcagttttcctcggcagttaactgccgccggtttcctaaaaacttcggcaatttactaccgaaggggcatttccgt 35743401  T
Q  354 attttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaa 404  Q
    |  |||||||||||||||| ||| || | |||| | |||| ||||||||||    
T  35743400 aacttactcgtgtggcacagccatactatatgtagcaacaacaattctcaa 35743350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 41844385 - 41844503
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||||||||||||||||| |    ||| ||||||||||||| ||||  |||||||||||||||| ||| || | |    
T  41844385 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcaatttactaccgaaaggcatttccgtaacttactcgtgtggcacagccataccata 41844484  T
Q  384 tgtgggaacatcaattctc 402  Q
    ||| |||||| ||||||||    
T  41844485 tgtaggaacaacaattctc 41844503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 156 - 229
Target Start/End: Original strand, 42807498 - 42807571
Alignment:
Q  156 tgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaattt 229  Q
    |||||||||||  ||||||||||||||||| |||||||||| ||||||||||||| ||||||||||||||||||    
T  42807498 tgataatgtgcggttgatttgcttgcaatttgtgaaaatggctttggtgaagattggagagaaattgagaattt 42807571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 284 - 401
Target Start/End: Complemental strand, 1293429 - 1293312
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||||||||  |||||||||||  ||   ||||||||| ||||||||||||   || |  |||||||||||||||  |||    
T  1293429 tttcctcggcagttaactgccgccagtttattaaaaacttcgacagtttactgccgaagggcattttcgtaaagtatttatgtggcacaaccaaagcaaa 1293330  T
Q  384 tgtgggaacatcaattct 401  Q
    |||||||||| |||||||    
T  1293329 tgtgggaacagcaattct 1293312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 284 - 393
Target Start/End: Complemental strand, 2645508 - 2645399
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||| ||||||||||||| |||||||||||||||||| ||  |||||||||  | |||||  ||| |||||| |||||||| | |||||| |||    
T  2645508 tttcctcggctgttaactgccgccggtttcctaaaaacttcggcagttaactgccgagggacatttgtgtaatttacttgtgtggcatagccaaaccaaa 2645409  T
Q  384 tgtgggaaca 393  Q
    ||||||||||    
T  2645408 tgtgggaaca 2645399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 286 - 405
Target Start/End: Original strand, 46702048 - 46702167
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||  |||||||| |||  || |||||||||| ||  |||||| ||| | |||||| ||||||||||||||||||||||||| || | |||    
T  46702048 tcctcgggagtttgctgccgccggttcactcaaaacttcggcagttaactgctgaaggacattttggtattttactcgtgtggcacaaccatactatatg 46702147  T
Q  386 tgggaacatcaattctcaac 405  Q
    |||||||| |||||||||||    
T  46702148 tgggaacagcaattctcaac 46702167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 300 - 402
Target Start/End: Complemental strand, 46388994 - 46388892
Alignment:
Q  300 ctgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaatt 399  Q
    |||||||| |||  || |||||||||| ||  |||||||||| |||||||| ||||||||||||||||||||| ||| || | ||||||||||| |||||    
T  46388994 ctgccgccggttcactcaaaacttcggcagttaactgccgaagggcattttggtattttactcgtgtggcacagccatactatatgtgggaacagcaatt 46388895  T
Q  400 ctc 402  Q
    |||    
T  46388894 ctc 46388892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 27739588 - 27739707
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||| ||  |||||||||| || ||||  ||| ||||||||||||||||| |||||| |||    
T  27739588 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaaccaaa 27739686  T
Q  384 tgtgggaacatcaattctcaa 404  Q
     ||||||||| ||||||||||    
T  27739687 agtgggaacaacaattctcaa 27739707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 375
Target Start/End: Complemental strand, 8475878 - 8475788
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaacc 375  Q
    |||||||||||||||||||||||| |||| || |||||||||| ||  |||||||||| | ||||||||||   ||||||||||||||||||    
T  8475878 tttcctcggcagttaactgccgccggtttact-aaaacttcggcagttaactgccgaaggacattttcgtaaagtactcgtgtggcacaacc 8475788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 42805974 - 42806054
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa 89  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||        |||| |||||||||||||||||||||||||||||||||    
T  42805974 tacattcatttatcaattcataaactatacatgcaattatcaa--------ttttaaaatcaaccctaaccacatacaaactactctaa 42806054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 292 - 402
Target Start/End: Complemental strand, 3493633 - 3493523
Alignment:
Q  292 gcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaa 391  Q
    |||||||||||||||| ||||| |||||||||||| ||  ||||| |||    |||||  ||| ||||||||||||||||| |||||| |||||||||||    
T  3493633 gcagttaactgccgccggtttcttaaaaacttcggcagttaactgtcgaggaacatttaagtaatttactcgtgtggcacagccaaactaaatgtgggaa 3493534  T
Q  392 catcaattctc 402  Q
     | ||||||||    
T  3493533 gaacaattctc 3493523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 292 - 402
Target Start/End: Complemental strand, 3497327 - 3497217
Alignment:
Q  292 gcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaa 391  Q
    |||||||||||||||| ||||| |||||||||||| ||  ||||| |||    |||||  ||| ||||||||||||||||| |||||| |||||||||||    
T  3497327 gcagttaactgccgccggtttcttaaaaacttcggcagttaactgtcgaggaacatttaagtaatttactcgtgtggcacagccaaactaaatgtgggaa 3497228  T
Q  392 catcaattctc 402  Q
     | ||||||||    
T  3497227 gaacaattctc 3497217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 285 - 393
Target Start/End: Original strand, 30947675 - 30947784
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||| |||||||||||||| ||||||||||||| |||| ||  ||||||||| | || |||| ||||  ||||| |||||||||||||| || | |    
T  30947675 ttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacaaccatactata 30947774  T
Q  384 tgtgggaaca 393  Q
    ||||||||||    
T  30947775 tgtgggaaca 30947784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 2647890 - 2647830
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaattt 229  Q
    ||||||||||||||||||||||||   ||||||| ||||||| ||||||||||||||||||    
T  2647890 ttgatttgcttgcaattcgtgaaagaagatttggcgaagattggagagaaattgagaattt 2647830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 11249545 - 11249664
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||||  || |||||| |||| | ||  |||||||||| || ||||  ||| ||||||||||||||||| |||||  |||    
T  11249545 tttcctcggcagttaactgcagccatatttctaaaa-cttcagcagttaactgccgaagggtatttgagtaatttactcgtgtggcacagccaaagtaaa 11249643  T
Q  384 tgtgggaacatcaattctcaa 404  Q
     ||||||||| ||||||||||    
T  11249644 agtgggaacagcaattctcaa 11249664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 28817022 - 28817141
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| ||| || ||  |||||||||  || ||||  ||| ||||||||||||||||| |||||| |||    
T  28817022 tttcctcggcagttaactgcagccgtatttctaaaa-ctttggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaa 28817120  T
Q  384 tgtgggaacatcaattctcaa 404  Q
     ||||||||||||||||||||    
T  28817121 agtgggaacatcaattctcaa 28817141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 372
Target Start/End: Complemental strand, 42165215 - 42165128
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcaca 372  Q
    ||||||||||| |||||||||||| |||| |||||| |||| | ||| |||||||||| ||||||||||||   |||||||||||||||    
T  42165215 tttcctcggcaattaactgccgccggtttactaaaa-cttcagcagctaactgccgaagggcattttcgtaaaatactcgtgtggcaca 42165128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 50998701 - 50998820
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||| ||||||||||||||| ||| | ||  ||||| |||||| ||  |||||||||  |||||||  ||| ||||||||||||||||| |||||| |||    
T  50998701 tttcttcggcagttaactgcagccggatttataaaa-cttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaa 50998799  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    || ||||||| ||||||||||    
T  50998800 tgcgggaacaacaattctcaa 50998820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 11095108 - 11095224
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| | | ||||| |||    ||||| ||| |||||||||  |||||||  ||| ||||||||||||||| | |||||| |||    
T  11095108 tttcctcggcagttaactgcagtcggtttcataa----ttcggcagctaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaa 11095203  T
Q  384 tgtgggaacatcaattctcaa 404  Q
     ||||||||| ||||||||||    
T  11095204 cgtgggaacaacaattctcaa 11095224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 31045305 - 31045388
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactac 84  Q
    ||||||| ||||||||||  |||||||||||||||||||||||| ||||||||     || |||||||||||||| ||||||||    
T  31045305 tacattcgtttatcaatttataaactacacatgcaatcatcaaaatgtcaattcattcataaaccctaaccacatgcaaactac 31045388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 288 - 402
Target Start/End: Original strand, 4008348 - 4008461
Alignment:
Q  288 ctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtg 387  Q
    |||| ||||||||||||||| |||| ||||||  ||||| ||   ||||||||| |||||||| |||   ||||||||||||||  |||||| |||||||    
T  4008348 ctcgacagttaactgccgccggtttactaaaat-ttcggcagtttactgccgaagggcatttttgtaaaatactcgtgtggcacggccaaaccaaatgtg 4008446  T
Q  388 ggaacatcaattctc 402  Q
    |||||| ||||||||    
T  4008447 ggaacagcaattctc 4008461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 288 - 393
Target Start/End: Original strand, 8160994 - 8161100
Alignment:
Q  288 ctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaa-ggcattttcgtattttactcgtgtggcacaaccaaacaaaatgt 386  Q
    |||||||||||||||||||| ||| ||||||||| |||| ||  ||||||||||| || |||| ||||  ||||| |||||||||| ||| || | ||||    
T  8160994 ctcggcagttaactgccgccggttgcctaaaaacctcggcagttaactgccgaaagggtatttgcgtaaattactggtgtggcacagccatactatatgt 8161093  T
Q  387 gggaaca 393  Q
    |||||||    
T  8161094 gggaaca 8161100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 34543157 - 34543274
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||| ||  |||||||||  | |||||  ||| ||||||| ||||||||| |||||| |||    
T  34543157 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgagggacatttgagtaatttactcatgtggcacagccaaaccaaa 34543255  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  34543256 tgtgggaacaacaattctc 34543274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 285 - 393
Target Start/End: Complemental strand, 3948780 - 3948671
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||| |||||||||||||| ||||||||||||| |||| ||  ||||||||| |||| |||| | ||  ||||| |||||||||| ||| || | |    
T  3948780 ttcctcggtagttaactgccgccggtttcctaaaaacctcggcagttaactgccgagaaggtatttgcataaattactggtgtggcacagccatactata 3948681  T
Q  384 tgtgggaaca 393  Q
    ||||||||||    
T  3948680 tgtgggaaca 3948671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 402
Target Start/End: Complemental strand, 19988479 - 19988394
Alignment:
Q  317 aaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||| ||  |||||||||  |||||||  ||| ||||||||||||||||| |||||| ||||||| ||||| ||||||||    
T  19988479 aaaacttcggcagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgagaacagcaattctc 19988394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 286 - 402
Target Start/End: Complemental strand, 54386184 - 54386067
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaagg-cattttcgtattttactcgtgtggcacaaccaaacaaaat 384  Q
    ||||||| ||||  |||||||| |||  || |||||||||| ||  ||||||||||||| |||||| ||||||||||||||||||||| ||| || | ||    
T  54386184 tcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccgaaagggcattttggtattttactcgtgtggcacagccatactatat 54386085  T
Q  385 gtgggaacatcaattctc 402  Q
    ||| ||| | ||||||||    
T  54386084 gtgagaagagcaattctc 54386067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 372
Target Start/End: Original strand, 4015150 - 4015237
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcaca 372  Q
    |||||||||||||||||| ||||| |||| || |||||||||| ||  |||||||||| ||||||||||||   |||||||||| ||||    
T  4015150 tttcctcggcagttaactcccgccggtttact-aaaacttcggcagttaactgccgaagggcattttcgtaaagtactcgtgtgacaca 4015237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 375
Target Start/End: Original strand, 42166431 - 42166521
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaacc 375  Q
    |||||||||||||| ||||||||| |||| || |||||||||| ||  |||||||||| | |||||| |||   ||||||||||||||||||    
T  42166431 tttcctcggcagtttactgccgccggtttact-aaaacttcggcagttaactgccgaatgacatttttgtaaagtactcgtgtggcacaacc 42166521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 4002792 - 4002675
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| | || |||||| |||||| |   || ||||||  |||||||  | | ||||||||||||||||| |||||| |||    
T  4002792 tttcctcggcagttaactgcagccggatttctaaaa-cttcggcaattaaatgccgaggggcatttgagcaatttactcgtgtggcacagccaaaccaaa 4002694  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||| ||||    
T  4002693 tgtgggaacaacaactctc 4002675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 12897876 - 12897759
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||| ||  |||||| ||  || ||||  ||| ||||||||||||||||| |||||| |||    
T  12897876 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgctgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaa 12897778  T
Q  384 tgtgggaacatcaattctc 402  Q
     ||||||||| ||||||||    
T  12897777 agtgggaacaacaattctc 12897759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 407
Target Start/End: Complemental strand, 2267024 - 2266960
Alignment:
Q  343 ggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaacaa 407  Q
    |||||||  ||| |||||||||||| |||  |||||| |||||||||||||||||||||| ||||    
T  2267024 ggcatttgagtaatttactcgtgtgacacggccaaaccaaatgtgggaacatcaattctctacaa 2266960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 372
Target Start/End: Original strand, 4331841 - 4331928
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcaca 372  Q
    ||||||| |||||||||||||||| |||| || |||||||||| ||  |||||||||| |  |||||||||   |||||||||||||||    
T  4331841 tttcctcagcagttaactgccgccggtttact-aaaacttcggcagttaactgccgaaggatattttcgtaaagtactcgtgtggcaca 4331928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 289 - 349
Target Start/End: Complemental strand, 16611147 - 16611088
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattt 349  Q
    ||||||||||||||||||| |||| || |||||||||||||  |||||||||| |||||||    
T  16611147 tcggcagttaactgccgccggttttct-aaaacttcggtagttaactgccgaagggcattt 16611088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 289 - 349
Target Start/End: Original strand, 22048106 - 22048165
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattt 349  Q
    ||||||||||||||||||| |||| || |||||||||||||  |||||||||| |||||||    
T  22048106 tcggcagttaactgccgccggttttct-aaaacttcggtagttaactgccgaagggcattt 22048165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 2950418 - 2950363
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccg 339  Q
    ||||||||||| |||||||||||| || ||||||||||||||| ||  ||||||||    
T  2950418 tttcctcggcacttaactgccgccggtgtcctaaaaacttcggcaggtaactgccg 2950363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 46406612 - 46406667
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccg 339  Q
    ||||||||||| |||||||||||| || ||||||||||||||| ||  ||||||||    
T  46406612 tttcctcggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccg 46406667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 301
Target Start/End: Complemental strand, 46697803 - 46697772
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||||||||||||||||||||||||||||    
T  46697803 tgtttaagttcagatttcctcggcagttaact 46697772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 49138666 - 49138611
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccg 339  Q
    ||||||||||| |||||||||||| || ||||||||||||||| ||  ||||||||    
T  49138666 tttcctcggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccg 49138611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 356 - 402
Target Start/End: Complemental strand, 11248538 - 11248492
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    ||||||||| ||||| | |||||| ||||||||||||||||||||||    
T  11248538 tttactcgtatggcatagccaaaccaaatgtgggaacatcaattctc 11248492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 16851131 - 16851061
Alignment:
Q  332 aactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||  |||||||  |||  |||||||||||||| | |||||| ||||||||||||| ||||||||    
T  16851131 aactgccgaggggcatttgagtaaattactcgtgtggcatagccaaactaaatgtgggaacaacaattctc 16851061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 326
Target Start/End: Original strand, 34051334 - 34051376
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcgg 326  Q
    ||||||||||| |||||||||||| || |||||||||||||||    
T  34051334 tttcctcggcacttaactgccgccggtgtcctaaaaacttcgg 34051376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 2967896 - 2967937
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||| |||| ||| |||||||||||||||||||||||||    
T  2967896 ttctgcgttctggttatgttcagatttcctcggcagttaact 2967937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 357 - 402
Target Start/End: Original strand, 12898780 - 12898825
Alignment:
Q  357 ttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||||||| | |||||| ||||||||||||| ||||||||    
T  12898780 ttactcgtgtggcatagccaaaccaaatgtgggaacagcaattctc 12898825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 34048954 - 34049011
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| |||||||||||||   || |||| ||||||||||||||| |||||||    
T  34048954 ttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaa 34049011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 46389060 - 46389015
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccg 305  Q
    ||||||| |||| ||| |||||| ||||||||||||||||||||||    
T  46389060 ttctgcgttctggttatgttcagttttcctcggcagttaactgccg 46389015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 46402256 - 46402313
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| |||||||||||||   || |||| ||||||||||||||| |||||||    
T  46402256 ttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaa 46402313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 46701996 - 46702041
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccg 305  Q
    ||||||| |||| ||| |||||| ||||||||||||||||||||||    
T  46701996 ttctgcgttctggttatgttcagttttcctcggcagttaactgccg 46702041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 49141046 - 49140989
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| |||||||||||||   || |||| ||||||||||||||| |||||||    
T  49141046 ttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaa 49140989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 301
Target Start/End: Original strand, 49144427 - 49144468
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||| |||| ||| |||||||||||||||||||||||||    
T  49144427 ttctgcgttctggttatgttcagatttcctcggcagttaact 49144468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 54389677 - 54389734
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| |||||||||||||   || |||| ||||||||||||||| |||||||    
T  54389677 ttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaa 54389734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 188; Significance: 1e-101; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 1 - 251
Target Start/End: Complemental strand, 17835437 - 17835188
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||         ||    
T  17835437 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccttaaccacatacaaactactctaatttttttaaaa 17835338  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17835337 aaatcaacataaacaaattaacattaacattaaaatgattga-acaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 17835239  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatggga 251  Q
    |||||||||| |||||||||||||||||| |||| | ||||||||||||||    
T  17835238 ggtgaagattggagagaaattgagaattttgaaattgttttggaaatggga 17835188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 178; E-Value: 1e-95
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 34738727 - 34738425
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnn-- 98  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||               
T  34738727 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaattttttttttt 34738628  T
Q  99 aaaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggat 198  Q
    |||||||||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||    
T  34738627 aaaaatcaacctaaacaaattaacattatcattaaaatgattgacacaacttacttgtgataatgtgcagatgatttgcttgcaattcgtgaaaatagat 34738528  T
Q  199 ttggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgg-gaggttctggttctgcgatctgtttaagttcagatttcctcggcagtt 297  Q
    |||||||||||| ||||||||||| |||||| |||  | ||||||||||||  |||||||||||||||| | || ||| |||||||||||||||||||||    
T  34738527 ttggtgaagattggagagaaattgtgaattttgaagatgttttggaaatggaaaggttctggttctgcg-tatgattatgttcagatttcctcggcagtt 34738429  T
Q  298 aact 301  Q
    ||||    
T  34738428 aact 34738425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 27453331 - 27453634
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||          |    
T  27453331 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaactctaaccacatgcaaactactctaatttttttttta 27453430  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||| |||    
T  27453431 aaataaacctaaacaaactaacattatcattaaaatgattgatacaacttacttgtgataatgtgcaattgatttgcttgcaatttgtgaaaatggcttt 27453530  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatggga--ggttctggttctgcgatctgtttaagttcagatttcctcggcagtta 298  Q
    |||||||||| ||||||||||| |||||| |||    |||||||||||| |  | ||||| ||||||| | || ||||||||||||||||||||||||||    
T  27453531 ggtgaagattggagagaaattgtgaattttgaagaagttttggaaatggtaatgtttctgtttctgcg-tatgattaagttcagatttcctcggcagtta 27453629  T
Q  299 actgc 303  Q
    |||||    
T  27453630 actgc 27453634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 155; E-Value: 6e-82
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 15073940 - 15074240
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||| |||||||||| ||         ||    
T  15073940 tacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc-aatttttttaaaa 15074038  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    || | |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15074039 aacttaacataaacaaattaatattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttacaattcgtgaaaatggattt 15074138  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaag-ttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaa 299  Q
    |||||||||| |||||||||||||||||| ||| | ||||||| ||||||||||||||||||||||| |||| ||| || |||||||||||| |||||||    
T  15074139 ggtgaagattggagagaaattgagaattttgaatgtttttttgtaaatgggaggttctggttctgcgttctggttatgtccagatttcctcgacagttaa 15074238  T
Q  300 ct 301  Q
    ||    
T  15074239 ct 15074240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 147; E-Value: 3e-77
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 42507739 - 42508039
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||| | ||||||||||||||||| || ||||||| ||||     || || ||||||||||| ||||||| || ||         ||    
T  42507739 tacattcatttatcaatacataaactacacatgcaatgatgaaattgttaattcatttataaaacctaaccacatgcaaactagtc-aatttttttaaaa 42507837  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    || | |||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42507838 aacttaacataaacaaattaacattaacattaaaatgtttgacacaagttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 42507937  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaag-ttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaa 299  Q
    |||||||||| |||||||||||||||||| ||| | ||||||| ||||| ||||||||||||||||| |||| ||| || ||||||||||||||||||||    
T  42507938 ggtgaagattggagagaaattgagaattttgaatgtttttttgtaaatgagaggttctggttctgcgttctggttatgtccagatttcctcggcagttaa 42508037  T
Q  300 ct 301  Q
    ||    
T  42508038 ct 42508039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 229
Target Start/End: Complemental strand, 39460889 - 39460661
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||         ||    
T  39460889 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaattttttttaaa 39460790  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||    
T  39460789 aaataaacctaaacaaactaacattatcattaaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatgacttt 39460690  T
Q  201 ggtgaagatttgagagaaattgagaattt 229  Q
    |||||| ||| ||||||||||||||||||    
T  39460689 ggtgaacattagagagaaattgagaattt 39460661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 10517341 - 10517128
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||         ||    
T  10517341 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaa-tttttttaaa 10517243  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||  |||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||   |||||    
T  10517242 aaatcaacctaaacaaattaacattatgattaaaatgattgacacagcttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaagaagattt 10517143  T
Q  201 ggtgaagatttgaga 215  Q
    |||||||||| ||||    
T  10517142 ggtgaagattggaga 10517128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 47776695 - 47776395
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa-nnnnnnnnna 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||          |    
T  47776695 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaatttttttttaa 47776596  T
Q  100 aaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatt 199  Q
    ||||| ||| |||||||| ||||||||  |||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||| |||||||||  ||    
T  47776595 aaaataaacctaaacaaactaacattatcattaaaatgattgatacaccttacttgtgataatgtgcagttgatttgcttgcaatttgtgaaaatgactt 47776496  T
Q  200 tggtgaagatttgagagaaattgagaatttagaaagttttttggaaatggga--ggttctggttctgcgatctgtttaagttcagatttcctcggcagtt 297  Q
    ||||||||||| ||||||||| | |||||| | |    |||||||||||| |  | ||||| ||||||| | || |||||||||||||||||||||||||    
T  47776495 tggtgaagattggagagaaatggtgaattttggagaagttttggaaatggtaatgtttctgtttctgcg-tatgattaagttcagatttcctcggcagtt 47776397  T
Q  298 aa 299  Q
    ||    
T  47776396 aa 47776395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 37340665 - 37340440
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||| ||||||||| |||         ||    
T  37340665 tacattcatttttcaattcataaactacacatgaaatcatcaaattgtcaattttaaaatcaatcctaaccacatccaaactactataatttttttaaaa 37340566  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| |||||||| | ||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||| |||    
T  37340565 aaataaacctaaacaaactaacattattgttaaaatgattgatacaacttacttgtgataatgtgctgttgatttgcttgcaattcgtgaaaatggcttt 37340466  T
Q  201 ggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| || |||| |||||||    
T  37340465 ggtgaagattggaaagaatttgagaa 37340440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 36977959 - 36977733
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||  |         ||    
T  36977959 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactcagattttttttaaa 36977860  T
Q  101 aaa--tcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggat 198  Q
    |||  | ||| |||||||| ||||||||  |||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||| |    
T  36977859 aaaaataaacctaaacaaactaacattatcattaaaatgattgatacaacttacttgtgataatgtacagttgatttgcttgcaattcgtgaaaatggct 36977760  T
Q  199 ttggtgaagatttgagagaaattgaga 225  Q
    |||||||||||| || |||| ||||||    
T  36977759 ttggtgaagattggaaagaatttgaga 36977733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 113; E-Value: 7e-57
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 47672797 - 47673004
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| || | || ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||         ||    
T  47672797 tacattcatttatcaattcatagattatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactataatttttttttaa 47672896  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||| | |||    
T  47672897 aaataaacctaaacaaactaacattatcattaaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatagcttt 47672996  T
Q  201 ggtgaaga 208  Q
    | ||||||    
T  47672997 gatgaaga 47673004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 603831 - 603713
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| |||||||| |    
T  603831 tttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacagccaaacaaca 603732  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  603731 tgtgggaacagcaattctc 603713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 10097968 - 10097850
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||| |    
T  10097968 tttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaaggacattttcgtattttactcgtgtggcacagccaaacaaca 10097869  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  10097868 tgtgggaacaacaattctc 10097850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 210
Target Start/End: Original strand, 9494507 - 9494727
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnn-- 98  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||| |||||||| |||||||||| |||||||| |||||||||||||               
T  9494507 tacattcatttatcaattcataaattacacatgcaaccatcaaattttcaattttaaaatcaacccaaaccacatgcaaactactctaatttttttattt 9494606  T
Q  99 ---------aaaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtg 189  Q
             |||||| ||| |||||||| ||||||||  |||||||||||||| |||||||||||||||||||||||| |||||||||||| ||||||||    
T  9494607 tatttttttaaaaataaacctaaacaaactaacattatcattaaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttggaattcgtg 9494706  T
Q  190 aaaatggatttggtgaagatt 210  Q
    ||||||| |||||||||||||    
T  9494707 aaaatggctttggtgaagatt 9494727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 41884147 - 41884265
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||| |||| |    
T  41884147 tttcctcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaaggacattttcgtattttactcgtgtggcacagccacacaaca 41884246  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||| | ||||||||    
T  41884247 tgtgggaatagcaattctc 41884265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 283 - 398
Target Start/End: Complemental strand, 43619758 - 43619643
Alignment:
Q  283 atttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaa 382  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| |  ||||| ||||||||||||||||||||| ||||||||     
T  43619758 atttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaaggatattttggtattttactcgtgtggcacagccaaacaac 43619659  T
Q  383 atgtgggaacatcaat 398  Q
    ||||||||||| ||||    
T  43619658 atgtgggaacagcaat 43619643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 284 - 398
Target Start/End: Original strand, 45767882 - 45767995
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||||||||||||||||||| |||||| |||    
T  45767882 tttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttactcgtgtggcacagccaaac-aaa 45767980  T
Q  384 tgtgggaacatcaat 398  Q
    |||||||||| ||||    
T  45767981 tgtgggaacagcaat 45767995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 48407347 - 48407460
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||  |||||||| |||| |||||||||||||||| |||||||| ||||||    
T  48407347 tcggcagttaactgccgccggtttcctaaaaacttcggtagcaaactgccgaggggcattttagtatattactcgtgtggcacagccaaacaacatgtgg 48407446  T
Q  389 gaacatcaattctc 402  Q
    ||| | ||||||||    
T  48407447 gaagagcaattctc 48407460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 20564125 - 20564007
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||| ||||||| ||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||| || | |    
T  20564125 tttcttcggcagctaactgccgccggtttccttaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtatggcacaaccatactata 20564026  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  20564025 tgtgggaacagcaattctc 20564007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 35606841 - 35606723
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||| |  || ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||||||  ||||||| |    
T  35606841 tttcctcggcagttaactgccgtcgattgcctaaaaacttcgatagcaaactgccgaagagcattttcgtattttactcgtgtggcacaggcaaacaaca 35606742  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  35606741 tgtgggaacaacaattctc 35606723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 260 - 403
Target Start/End: Complemental strand, 41880590 - 41880447
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtatttta 359  Q
    ||||||| |||| ||| |||||| ||||||||| ||| | |||||||| |||  ||| ||||||||||||  |||||||||| |||||||||||||||||    
T  41880590 ttctgcgttctggttatgttcagttttcctcggtagtaagctgccgccggttcactacaaacttcggtagttaactgccgaagggcattttcgtatttta 41880491  T
Q  360 ctcgtgtggcacaaccaaacaaaatgtgggaacatcaattctca 403  Q
    ||||||||||||||||| || | ||||||||||| |||||||||    
T  41880490 ctcgtgtggcacaaccatactatatgtgggaacaacaattctca 41880447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 289 - 403
Target Start/End: Complemental strand, 10098379 - 10098266
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||| | ||||||    
T  10098379 tcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtgg 10098281  T
Q  389 gaacatcaattctca 403  Q
    ||||| |||||||||    
T  10098280 gaacaacaattctca 10098266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 16636268 - 16636381
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| ||  ||||||||  || ||||||||||||||||| |||||||| ||||||    
T  16636268 tcggcagttaactgccgtcggtttcctaaaaacttcggtagcaaactgctgaggggcattttgatactttactcgtgtggcacagccaaacaacatgtgg 16636367  T
Q  389 gaacatcaattctc 402  Q
    ||||| ||||||||    
T  16636368 gaacaacaattctc 16636381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 289 - 402
Target Start/End: Complemental strand, 17459370 - 17459257
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| ||  ||||||||  || ||||||||||||||||| |||||||| ||||||    
T  17459370 tcggcagttaactgccgtcggtttcctaaaaacttcggtagcaaactgctgaggggcattttgatactttactcgtgtggcacagccaaacaacatgtgg 17459271  T
Q  389 gaacatcaattctc 402  Q
    ||||| ||||||||    
T  17459270 gaacaacaattctc 17459257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 17593844 - 17593957
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||| ||  ||||||||  || ||||||||||||||||| |||||||| ||||||    
T  17593844 tcggcagttaactgccgtcggtttcctaaaaacttcggtagcaaactgctgaggggcattttgatactttactcgtgtggcacagccaaacaacatgtgg 17593943  T
Q  389 gaacatcaattctc 402  Q
    ||||| ||||||||    
T  17593944 gaacaacaattctc 17593957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 7975630 - 7975748
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||| ||||||||||||| ||   ||||||||| | ||||||||||   |||||||||||||||||||||| |||    
T  7975630 tttcctcggcagttaactgccgccggtttactaaaaacttcggcagtttactgccgaaggacattttcgtaaagtactcgtgtggcacaaccaaaccaaa 7975729  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  7975730 tgtgggaacaacaattctc 7975748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 15074249 - 15074367
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||| |||||||| ||   ||| ||||| |||||||||||||||||||||||||||||| ||| || | |    
T  15074249 tttcctcggcagttaactgccgccggtttcctaagaacttcggcagtttactaccgaagggcattttcgtattttactcgtgtggcacagccatactata 15074348  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  15074349 tgtgggaacaacaattctc 15074367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 284 - 398
Target Start/End: Original strand, 30791029 - 30791143
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||| |||||||||||||| ||||||||||||| |||| |||| |||| |||| || ||||| ||||||||||||||||||||| |||||||| |    
T  30791029 tttcctcggtagttaactgccgccggtttcctaaaaacctcggcagcatactgtcgaagggtattttggtattttactcgtgtggcacagccaaacaaca 30791128  T
Q  384 tgtgggaacatcaat 398  Q
    |||||||||| ||||    
T  30791129 tgtgggaacagcaat 30791143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 398
Target Start/End: Complemental strand, 9365692 - 9365584
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||| | |||| |    
T  9365692 tcggcagttaactgccgccggtt-cctaaaaacttcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtag 9365594  T
Q  389 gaacatcaat 398  Q
    ||||| ||||    
T  9365593 gaacagcaat 9365584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 20566386 - 20566498
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| | ||||||||||| |||||||||||||| |||  |||||||| ||||||||||||||||||||| |||||| | ||||||    
T  20566386 tcggcagttaactgccgcc-gattcctaaaaacctcggtagcaaactgtcgaggggcattttggtattttactcgtgtggcacagccaaactatatgtgg 20566484  T
Q  389 gaacatcaattctc 402  Q
    ||||| ||||||||    
T  20566485 gaacaacaattctc 20566498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 42508048 - 42508168
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||| |||||||||||||||| |||||||||||||||||| ||   ||| ||||| ||||||| |||||||||||||||||||||| ||| || | |    
T  42508048 tttcctcagcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtattttactcgtgtggcacagccatactata 42508147  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  42508148 tgtgggaacaacaattctcaa 42508168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 40141247 - 40141366
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||||||||||||| |||| |||||||||||||||||| | |||||| ||||| |||||||  ||| ||||||||||||||||| |||||| | |    
T  40141247 tttcctcggcagttaactgtcgccggtttcctaaaaacttcggcaacaaactaccgaagggcatttgagtaatttactcgtgtggcacagccaaactata 40141346  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||| ||||    
T  40141347 tgtgggaacaacaatactca 40141366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 10098138 - 10098258
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| |||||||||||||||||| ||   ||| ||||| ||||||| ||||  |||||||||||||||| ||| || | |    
T  10098138 tttcctcggcagttaactgcagccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtgtggcacagccataccata 10098237  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  10098238 tgtgggaacagcaattctcaa 10098258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 286 - 404
Target Start/End: Original strand, 17465736 - 17465854
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||| |||||||| |||| ||||||| ||||  ||  |||||||||| || |||||||||||||||| |||||||||| ||| || | |||    
T  17465736 tcctcggtagttagctgccgccggtttactaaaaatttcgacagttaactgccgaagggtattttcgtattttactggtgtggcacagccatactatatg 17465835  T
Q  386 tgggaacatcaattctcaa 404  Q
    |||||||||||||||||||    
T  17465836 tgggaacatcaattctcaa 17465854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 286 - 404
Target Start/End: Complemental strand, 17587478 - 17587360
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||| |||||||| |||| ||||||| ||||  ||  |||||||||| || |||||||||||||||| |||||||||| ||| || | |||    
T  17587478 tcctcggtagttagctgccgccggtttactaaaaatttcgacagttaactgccgaagggtattttcgtattttactggtgtggcacagccatactatatg 17587379  T
Q  386 tgggaacatcaattctcaa 404  Q
    |||||||||||||||||||    
T  17587378 tgggaacatcaattctcaa 17587360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 18105425 - 18105307
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||   ||| ||||| | ||||| |||||||||||||||||| ||  ||| || | |    
T  18105425 tttcctcggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaaggacatttccgtattttactcgtgtggtacggccatactata 18105326  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  18105325 tgtgggaacaacaattctc 18105307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 286 - 398
Target Start/End: Complemental strand, 48403422 - 48403310
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||| |||||||| |||| ||||||||||||| ||  |||||||||| |||||||| |||||||||| |||||||||| ||| || | |||    
T  48403422 tcctcggtagttagctgccgccggtttgctaaaaacttcggcagttaactgccgaagggcatttttgtattttactggtgtggcacagccatactatatg 48403323  T
Q  386 tgggaacatcaat 398  Q
    |||||||| ||||    
T  48403322 tgggaacagcaat 48403310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 17741170 - 17741391
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||||||||     || |||||||||||||| |||||||||| ||               
T  17741170 tacattcatttatcaattcataaactacacatgcaatcttcaaaatgtcaattcattcataaaccctaaccacatgcaaactactc-aaaaaaataaatt 17741268  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||| ||| |||||||| ||||||||| |||| ||||| | |  | |||||||| ||||||||||    ||||| ||||| ||||||||||||||| |||    
T  17741269 aaatgaacctaaacaaactaacattaagattacaatgactaatgctacttacttttgataatgtggggatgattggcttgtaattcgtgaaaatggcttt 17741368  T
Q  201 ggtgaagatttgagagaaattga 223  Q
    |||||  ||| ||||||| ||||    
T  17741369 ggtgagaattagagagaagttga 17741391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 7121 - 7004
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||||||  |||||||||  |||||||  ||| ||||||||||||||||| |||||||| |    
T  7121 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggtagttaactgccgaggggcatttgagtaatttactcgtgtggcacagccaaacaaca 7023  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  7022 tgtgggaacagcaattctc 7004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 318 - 408
Target Start/End: Original strand, 35610470 - 35610560
Alignment:
Q  318 aaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaacaat 408  Q
    ||||||||| ||  |||||||||| ||||||||||||||||||| |||||||||| ||| || | ||||||||||| ||||||||||||||    
T  35610470 aaacttcggcagttaactgccgaatggcattttcgtattttactggtgtggcacagccatactatatgtgggaacagcaattctcaacaat 35610560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 18109795 - 18109913
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||| |  ||||||||||  ||   ||||||||| |||||||   || ||||||||||| ||||| |||||| |||    
T  18109795 tttcctcggcagttaactgccgccggttgcacaaaaacttcgacagtttactgccgaagggcatttgaataatttactcgtgtagcacagccaaaccaaa 18109894  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  18109895 tgtgggaacaacaattctc 18109913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 46907588 - 46907474
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| ||||| |||    ||||| ||  |||||||||| |||||||  ||| ||||||||||||||| | |||||| |||    
T  46907588 tttcctcggcagttaactgcagccggtttcataa----ttcggcagttaactgccgaagggcatttgagtaatttactcgtgtggcatagccaaaccaaa 46907493  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  46907492 tgtgggaacagcaattctc 46907474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 284 - 372
Target Start/End: Complemental strand, 17834539 - 17834452
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcaca 372  Q
    |||||||||||||||||||||||| |||| |||||| |||||| ||  |||||||||| ||||||||| ||  ||||||||||||||||    
T  17834539 tttcctcggcagttaactgccgccggtttactaaaa-cttcggcagttaactgccgaagggcattttcataaattactcgtgtggcaca 17834452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 284 - 404
Target Start/End: Complemental strand, 27657090 - 27656971
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| ||| || ||  |||||||||  |||||||   || |||||||||||||||||||||||| |||    
T  27657090 tttcctcggcagttaactgcagccgtatttctaaaa-ctttggcagttaactgccgaggggcatttgaataatttactcgtgtggcacaaccaaaccaaa 27656992  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  27656991 tgtgggaacagcaattctcaa 27656971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 279 - 391
Target Start/End: Original strand, 40928943 - 40929055
Alignment:
Q  279 tcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaa 378  Q
    |||| |||||||||||||||||||| ||| ||| |  ||||||||||| ||   |||||||||||||||||  |||  ||| ||||||||||||||||||    
T  40928943 tcagttttcctcggcagttaactgctgccggttgcacaaaaacttcggcagtttactgccgaaaggcatttgagtaaattattcgtgtggcacaaccaaa 40929042  T
Q  379 caaaatgtgggaa 391  Q
      |||||||||||    
T  40929043 tcaaatgtgggaa 40929055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 8068 - 8186
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||| ||||  |||||||||  |||||||  ||| |||||| |||||||||| |||||||| |    
T  8068 tttcctcggcagttaactgcagccgtatttctaaaa-cttctgtagttaactgccgaggggcatttgagtaatttacttgtgtggcacagccaaacaaca 8166  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||||||||    
T  8167 tgtgggaacagcaattctca 8186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 291 - 402
Target Start/End: Original strand, 13921292 - 13921402
Alignment:
Q  291 ggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtggga 390  Q
    ||||||||||||||||  | || |||||| |||||| ||  |||||||||   ||||||  ||| |||||||||||||||||||||||| ||||||||||    
T  13921292 ggcagttaactgccgctggatttctaaaa-cttcggcagttaactgccgaggagcatttgagtaatttactcgtgtggcacaaccaaaccaaatgtggga 13921390  T
Q  391 acatcaattctc 402  Q
    ||| ||||||||    
T  13921391 acaacaattctc 13921402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 10524378 - 10524495
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||  | |||| |||||| |||||  ||  |||||||||  |||||||  ||| |||||||||||| |||| |||||| |||    
T  10524378 tttcctcggcagttaactgccatcggttttctaaaa-cttcgacagttaactgccgaggggcatttgagtaatttactcgtgtgacacagccaaaccaaa 10524476  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  10524477 tgtgggaacaacaattctc 10524495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 12210611 - 12210728
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||| ||  |||||||||  |||||||  ||| ||||||||| ||||||| |||||| |||    
T  12210611 tttcctcggcagttaactgcggccgtatttctaaaa-cttcggcagttaactgccgaggggcatttgagtaatttactcgtatggcacagccaaaccaaa 12210709  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  12210710 tgtgggaacagcaattctc 12210728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 15070668 - 15070608
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaattt 229  Q
    |||||||||| |||||||||||||   ||||||| ||||||||||||||||||||||||||    
T  15070668 ttgatttgctcgcaattcgtgaaagaagatttggcgaagatttgagagaaattgagaattt 15070608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 286 - 404
Target Start/End: Original strand, 9371410 - 9371529
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaacca-aacaaaat 384  Q
    ||||||| ||||  |||||||| |||  || |||||||||| ||  ||||||| || |||||||| |||||||||| |||||||||||||| | | | ||    
T  9371410 tcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccaaagggcattttggtattttacttgtgtggcacaaccatacctatat 9371509  T
Q  385 gtgggaacatcaattctcaa 404  Q
    ||||||||| ||||||||||    
T  9371510 gtgggaacaacaattctcaa 9371529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 334 - 404
Target Start/End: Original strand, 28564605 - 28564675
Alignment:
Q  334 ctgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaa 404  Q
    |||||||  |||||||  ||| |||||||||||||||||||||||| |||| |||||||| ||||||||||    
T  28564605 ctgccgatgggcatttgagtaatttactcgtgtggcacaaccaaaccaaatatgggaacaacaattctcaa 28564675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 284 - 399
Target Start/End: Complemental strand, 49140705 - 49140594
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| ||||| |||    ||||| ||  |||||||||  || ||||  ||| ||||||||||| ||| |||||||| |||    
T  49140705 tttcctcggcagttaactgcagccggtttcataa----ttcggcagttaactgccgaggggtatttgagtaatttactcgtgtagcataaccaaaccaaa 49140610  T
Q  384 tgtgggaacatcaatt 399  Q
    ||||||||||||||||    
T  49140609 tgtgggaacatcaatt 49140594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 286 - 403
Target Start/End: Original strand, 10168281 - 10168398
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||  |||||||| |||  || |||||||||| ||  ||||||| || ||||||||  |||||||||||||| ||||| ||| || | |||    
T  10168281 tcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccaaagggcattttgatattttactcgtgtagcacatccatactatatg 10168380  T
Q  386 tgggaacatcaattctca 403  Q
    |||||||| |||||||||    
T  10168381 tgggaacaacaattctca 10168398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 286 - 403
Target Start/End: Original strand, 10175806 - 10175923
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||||  |||||||| |||  || |||||||||| ||  ||||||| || ||||||||  |||||||||||||| ||||| ||| || | |||    
T  10175806 tcctcggtagtttgctgccgccggttcactcaaaacttcggcagttaactgccaaagggcattttgatattttactcgtgtagcacatccatactatatg 10175905  T
Q  386 tgggaacatcaattctca 403  Q
    |||||||| |||||||||    
T  10175906 tgggaacaacaattctca 10175923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 49141642 - 49141756
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| ||||| |||    ||| | ||  |||||||||  |||||||  ||| ||||||||||||||| | |||||| |||    
T  49141642 tttcctcggcagttaactgcagccggtttcataa----ttctgcagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaaccaaa 49141737  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  49141738 tgtgggaacaacaattctc 49141756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 14689770 - 14689854
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactact 85  Q
    |||||||||||||||||   ||||||||||||||||| || ||||||||||||     ||||| | |||||||||||||||||||    
T  14689770 tacattcatttatcaataaataaactacacatgcaatgatgaaattgtcaattcatttatcaaacttaaccacatacaaactact 14689854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 278 - 402
Target Start/End: Original strand, 46908488 - 46908611
Alignment:
Q  278 ttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaa 377  Q
    ||||| |||||||||||||||||||| |||   || |||||| |||||  ||  ||||||||| ||| ||||   || ||||||||||||||||| ||||    
T  46908488 ttcagttttcctcggcagttaactgcagccgtatttctaaaa-cttcgacagttaactgccgagaggtatttaaataatttactcgtgtggcacagccaa 46908586  T
Q  378 acaaaatgtgggaacatcaattctc 402  Q
    || ||| ||||||||| ||||||||    
T  46908587 accaaaagtgggaacagcaattctc 46908611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 332 - 403
Target Start/End: Original strand, 42583128 - 42583199
Alignment:
Q  332 aactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctca 403  Q
    ||||||||| ||| ||||  ||| ||||||||||||||||| |||||| ||| ||||||||| |||||||||    
T  42583128 aactgccgagaggtatttgagtaatttactcgtgtggcacatccaaaccaaaagtgggaacaacaattctca 42583199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 285 - 403
Target Start/End: Complemental strand, 45763431 - 45763312
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||| ||||||||| |||| ||||||||||||| |||| ||  ||||||||| | || |||| ||||  ||||| |||||||||| ||| || | |    
T  45763431 ttcctcggtagttaactgtcgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactata 45763332  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| ||| |||||    
T  45763331 tgtgggaacagcaaatctca 45763312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 407
Target Start/End: Complemental strand, 42582164 - 42582045
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||  ||| ||||| |||    ||||| ||  |||||||||  | |||||  ||| ||||||||||||||| | |||||| |||    
T  42582164 tttcctcggcagttaactgtagccggtttcataa----ttcggcagttaactgccgagggacatttgagtaatttactcgtgtggcatagccaaaccaaa 42582069  T
Q  384 tgtgggaacatcaattctcaacaa 407  Q
    |||||||||| |||||||| ||||    
T  42582068 tgtgggaacagcaattctctacaa 42582045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 285 - 393
Target Start/End: Original strand, 43624167 - 43624276
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||| | ||||||||||||  |||||||||||| |||| ||  ||||||||| | || |||| ||||  ||||| |||||||||||||| || | |    
T  43624167 ttcctcggtaattaactgccgccgatttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacaaccatactata 43624266  T
Q  384 tgtgggaaca 393  Q
    ||||||||||    
T  43624267 tgtgggaaca 43624276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 286 - 402
Target Start/End: Original strand, 19804512 - 19804627
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    |||||||||||||||||| ||| |||||| | ||||||||| ||  |||| ||||  |||||||  |||  ||||||||||| | || ||||||||||||    
T  19804512 tcctcggcagttaactgcagccggtttcc-acaaacttcggcagttaactaccgaggggcatttaggtaaattactcgtgtgtctcagccaaacaaaatg 19804610  T
Q  386 tgggaacatcaattctc 402  Q
    ||  |||| ||||||||    
T  19804611 tgtcaacaacaattctc 19804627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 294 - 393
Target Start/End: Complemental strand, 30786589 - 30786489
Alignment:
Q  294 agttaactgccgccagtttcctaaaaacttcggtagcaaactgccga-aaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaac 392  Q
    |||||||||||||| ||||||||||||| |||| ||  ||||||||| | || |||| ||||  ||||| |||||||||| ||| || | ||||||||||    
T  30786589 agttaactgccgccggtttcctaaaaacctcggcagttaactgccgagagggtatttgcgtaaattactggtgtggcacagccatactatatgtgggaac 30786490  T
Q  393 a 393  Q
    |    
T  30786489 a 30786489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 9365731 - 9365676
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccg 339  Q
    ||||||||||| |||||||||||| || ||||||||||||||| ||  ||||||||    
T  9365731 tttcctcggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccg 9365676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 10098418 - 10098363
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccg 339  Q
    ||||||||||| |||||||||||| || ||||||||||||||| ||  ||||||||    
T  10098418 tttcctcggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccg 10098363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 301
Target Start/End: Complemental strand, 35606881 - 35606850
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||||||||||||||||||||||||||||    
T  35606881 tgtttaagttcagatttcctcggcagttaact 35606850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 301
Target Start/End: Original strand, 41884107 - 41884138
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||||||||||||||||||||||||||||    
T  41884107 tgtttaagttcagatttcctcggcagttaact 41884138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 356 - 403
Target Start/End: Original strand, 42795172 - 42795219
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctca 403  Q
    ||||||||||||||||| |||||| ||| ||||||||| |||||||||    
T  42795172 tttactcgtgtggcacagccaaaccaaaagtgggaacaacaattctca 42795219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 350 - 404
Target Start/End: Original strand, 43686935 - 43686989
Alignment:
Q  350 tcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaa 404  Q
    |||||||||||| |||||||||||||  |  ||||||||||||| ||||||||||    
T  43686935 tcgtattttactagtgtggcacaaccttatcaaatgtgggaacagcaattctcaa 43686989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 332 - 402
Target Start/End: Original strand, 45258072 - 45258142
Alignment:
Q  332 aactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||  |||||||  ||| ||||||||||||||||| |||||  ||||||| ||||| ||||||||    
T  45258072 aactgccgaggggcatttgagtaatttactcgtgtggcacagccaaatcaaatgtgagaacaacaattctc 45258142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 9367915 - 9367858
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| |||||||||||||   || |||| ||||||||||||||| |||||||    
T  9367915 ttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaa 9367858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 17465684 - 17465729
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccg 305  Q
    ||||||| |||| ||| |||||| ||||||||||||||||||||||    
T  17465684 ttctgcgttctggttatgttcagttttcctcggcagttaactgccg 17465729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 17587530 - 17587485
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccg 305  Q
    ||||||| |||| ||| |||||| ||||||||||||||||||||||    
T  17587530 ttctgcgttctggttatgttcagttttcctcggcagttaactgccg 17587485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 285 - 326
Target Start/End: Complemental strand, 43033025 - 43032984
Alignment:
Q  285 ttcctcggcagttaactgccgccagtttcctaaaaacttcgg 326  Q
    |||||||| |||||||||||||| ||||||||||||| ||||    
T  43033025 ttcctcggtagttaactgccgccggtttcctaaaaacctcgg 43032984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293 (Bit Score: 175; Significance: 7e-94; HSPs: 2)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 175; E-Value: 7e-94
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 440 - 734
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||    
T  440 tacattcaattatcaatttctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaattttttaaaaa 539  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  540 aaatcaacctaaacaaattaacatta------aaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 633  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaac 300  Q
    || |||||||||||||||||||  || || ||||   ||||||||||| || |||||||||||||| | || ||| || ||| |||||||||||||||||    
T  634 ggagaagatttgagagaaattgttaaatttgaaaaagttttggaaatgagaagttctggttctgcgttatggttatgtccagttttcctcggcagttaac 733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0293; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 284 - 399
Target Start/End: Original strand, 743 - 858
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||| ||||||||||||||||| |||||||||||||||||| ||   ||| ||||| ||||||| |||||||||||| ||||||||| ||| || | |    
T  743 tttcctgggcagttaactgccgccggtttcctaaaaacttcggcagtttactaccgaagggcatttccgtattttactcatgtggcacagccatactata 842  T
Q  384 tgtgggaacatcaatt 399  Q
    |||||||||| |||||    
T  843 tgtgggaacaacaatt 858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 143; Significance: 8e-75; HSPs: 4)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 40747 - 41007
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||| |||||||||| ||         ||    
T  40747 tacattcatttatcaatacataaactacacatgcaatgatgaaattgtcaattcatttataaaacctaaccacatgcaaactactc-aatttttttaaaa 40845  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    || | |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40846 aacttaacataaacaaattaacattaacattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 40945  T
Q  201 ggtgaagatttgagagaaattgagaatttagaaag-ttttttggaaatgggaggttctggtt 261  Q
    |||||||||| |||||||||||||||||| ||| | ||||||| ||||||||||||||||||    
T  40946 ggtgaagattggagagaaattgagaattttgaatgtttttttgtaaatgggaggttctggtt 41007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 287 - 404
Target Start/End: Original strand, 41080 - 41197
Alignment:
Q  287 cctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgt 386  Q
    |||||| ||| | |||||||| |||| ||| ||||||||||||  |||||||||| || ||||| ||||||||||||||||||||| ||| || | ||||    
T  41080 cctcggtagtaagctgccgccggtttactacaaacttcggtagttaactgccgaagggtattttagtattttactcgtgtggcacagccatactatatgt 41179  T
Q  387 gggaacatcaattctcaa 404  Q
    ||||||| ||||||||||    
T  41180 gggaacagcaattctcaa 41197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 41043 - 41098
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccg 339  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||| || ||||||    
T  41043 tttcctcggcagttaactgccgccggtttcctaaaaacctcggtagtaagctgccg 41098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 36738 - 36678
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaattt 229  Q
    |||||||||| |||||||||||||   ||||||| | ||||||||||||||||||||||||    
T  36738 ttgatttgctcgcaattcgtgaaagaagatttggcggagatttgagagaaattgagaattt 36678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 141; Significance: 1e-73; HSPs: 2)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 229
Target Start/End: Original strand, 15335 - 15562
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||         ||    
T  15335 tacattcatttatcaatttctaaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatacaaactactctaattttttta-aa 15433  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    |||||||| |||||||||||||||||  |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||   |||||    
T  15434 aaatcaacctaaacaaattaacattatgattaaaatgattgacacaacttacttatgataatgtgcagttgatttgcttgcaattcgtgaaagaagattt 15533  T
Q  201 ggtgaagatttgagagaaattgagaattt 229  Q
    |||||||||| |||| || ||| ||||||    
T  15534 ggtgaagattggagaaaatttgtgaattt 15562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 15643 - 15761
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||| |||||| |||||  ||  |||||||||| | ||||||||||   |||||||||||||||||||||| |||    
T  15643 tttcctcggcagttaactgccgccggtttactaaaa-cttcgacagttaactgccgaaggacattttcgtaaagtactcgtgtggcacaaccaaaccaaa 15741  T
Q  384 tgtgggaacatcaattctca 403  Q
    ||||| |||| |||||||||    
T  15742 tgtggaaacaccaattctca 15761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 129; Significance: 2e-66; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 105 - 301
Target Start/End: Original strand, 18111 - 18305
Alignment:
Q  105 caacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtg 204  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18111 caacctaaacaaattaacattatcattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtg 18210  T
Q  205 aagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaact 301  Q
    |||||| ||||||||||| |||||| ||||   |||||||||||||| |||||||||||||||  || |||||| ||||||| ||||||||||||||    
T  18211 aagattggagagaaattgtgaattttgaaa-aattttggaaatgggaagttctggttctgcga-atgattaagtccagattttctcggcagttaact 18305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 129; Significance: 2e-66; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 105 - 301
Target Start/End: Complemental strand, 54733 - 54539
Alignment:
Q  105 caacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtg 204  Q
    |||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54733 caacctaaacaaattaacattatcattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtg 54634  T
Q  205 aagatttgagagaaattgagaatttagaaagttttttggaaatgggaggttctggttctgcgatctgtttaagttcagatttcctcggcagttaact 301  Q
    |||||| ||||||||||| |||||| ||||   |||||||||||||| |||||||||||||||  || |||||| ||||||| ||||||||||||||    
T  54633 aagattggagagaaattgtgaattttgaaa-aattttggaaatgggaagttctggttctgcga-atgattaagtccagattttctcggcagttaact 54539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 2e-50; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 31769066 - 31768861
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaa----tcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnn 96  Q
    ||||||||||| ||||||||||||| ||||||||||    ||||||||||||| ||||| ||||||||||||||||||| |||||||||||||           
T  31769066 tacattcatttgtcaattcctaaaccacacatgcaagcaatcatcaaattgtcgattttaaaatcaaccctaaccacatgcaaactactctaatttttaa 31768967  T
Q  97 nnaaaaa-tcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatg 195  Q
      ||||| ||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||  ||||||||    
T  31768966 aaaaaaaatcaacctaaacaaattaacattatcattaaaatgattgacacaacttacttgtgataatgtgcaatctatttgcttgcaatttatgaaaatg 31768867  T
Q  196 gatttg 201  Q
    ||||||    
T  31768866 gatttg 31768861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 1 - 227
Target Start/End: Original strand, 24088494 - 24088722
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactcta--annnnnnnnn 98  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||| |||||||||| ||||||||||||                
T  24088494 tacattcatttatcaattcataaactacacatgcaattatcaaattgtcaattttaaaatcaacactaaccacatgcaaactactctatttttttttttt 24088593  T
Q  99 aaaaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggat 198  Q
    |||||| ||| |||||||| ||||||||  |||||||||||||| |||||||| |||||||||| |||  ||||||||||||||||||||||||||   |    
T  24088594 aaaaataaacctaaacaaactaacattatcattaaaatgattgatacaacttatttgtgataatttgcggttgatttgcttgcaattcgtgaaaataact 24088693  T
Q  199 ttggtgaagatttgagagaaattgagaat 227  Q
    ||  |||| ||| ||||||||||||||||    
T  24088694 ttaatgaaaattggagagaaattgagaat 24088722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 270 - 403
Target Start/End: Complemental strand, 30826116 - 30825983
Alignment:
Q  270 tgtttaagttcagatttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggc 369  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||  |||||||  |||||||||||||||||    
T  30826116 tgtttaagttcagatttcctcggcagttaactgccgccggttgcctaaaaacttcggtagcaaactgccgaagagcatttttatattttactcgtgtggc 30826017  T
Q  370 acaaccaaacaaaatgtgggaacatcaattctca 403  Q
    ||| |||||||| ||||||||||| |||||||||    
T  30826016 acagccaaacaacatgtgggaacagcaattctca 30825983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 284 - 400
Target Start/End: Original strand, 26712244 - 26712360
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| || |||||| |||||||||||||||||||| | |||||| |    
T  26712244 tttcctcggcagttaactgccgccggtttcctaaaaacttcgttagcaaactgccgaagggtattttcatattttactcgtgtggcacagctaaacaaca 26712343  T
Q  384 tgtgggaacatcaattc 400  Q
    |||||||||||||||||    
T  26712344 tgtgggaacatcaattc 26712360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 283 - 398
Target Start/End: Complemental strand, 1608371 - 1608256
Alignment:
Q  283 atttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaa 382  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||| || ||||| ||||||||| ||||||||||| ||||||||     
T  1608371 atttcctcggcagttaactgccgccggtttcctaaaaacctcggtagcaaactgccgaagggtattttggtattttacacgtgtggcacagccaaacaac 1608272  T
Q  383 atgtgggaacatcaat 398  Q
    ||||||||||| ||||    
T  1608271 atgtgggaacagcaat 1608256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 27616767 - 27616648
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| ||| || | |    
T  27616767 tttcttcggcagttaactgccgccggtttccttaaaacttcggtagcaaactgccgaagggcattttggtattttactcgtgtggcacagccatactata 27616668  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||||||||    
T  27616667 tgtgggaacagcaattctca 27616648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6320275 - 6320363
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaa 89  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  6320275 tacattcatttatcaattcataaactacacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa 6320363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 18351664 - 18351782
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||||||||||||||| || ||||||||||| |||||||||||||||||||||   |||||| ||||||||||||||||||||| |||||||| |    
T  18351664 tttcctcggcagttaactgccaccggtttcctaaaatcttcggtagcaaactgccgaagaacattttggtattttactcgtgtggcacagccaaacaaca 18351763  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||| ||||| ||||||||    
T  18351764 tgtgagaacagcaattctc 18351782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 6320371 - 6320465
Alignment:
Q  132 aaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||| || |||| |||||||    
T  6320371 aaaatgattgatacaacttacttgtgataatgtgcagttgatttgcttgcaattcgtgaaaatggctttggtgaagattggaaagaatttgagaa 6320465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 27641778 - 27641890
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||  |||||||| |||||||||| |||||||||| |||||||| ||||||    
T  27641778 tcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtattttactagtgtggcacagccaaacaacatgtgg 27641876  T
Q  389 gaacatcaattctc 402  Q
    ||||| ||||||||    
T  27641877 gaacagcaattctc 27641890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 289 - 403
Target Start/End: Original strand, 11694087 - 11694200
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||| ||||||| ||| ||||||||| | ||||||||||||||||  |||||||| ||||||||||||||||||||| |||||| | ||||||    
T  11694087 tcggcagttaattgccgccggtt-cctaaaaaccttggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtgg 11694185  T
Q  389 gaacatcaattctca 403  Q
    ||||| |||||||||    
T  11694186 gaacagcaattctca 11694200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 289 - 402
Target Start/End: Original strand, 6207120 - 6207232
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| ||| ||||||||| ||| ||||||||||||||| |||||||| |||||||||||||||||||||  ||||| | ||||||    
T  6207120 tcggcagttaactgccgccggtt-cctaaaaacctcgatagcaaactgccgaagggcattttggtattttactcgtgtggcacagtcaaactatatgtgg 6207218  T
Q  389 gaacatcaattctc 402  Q
    ||| | ||||||||    
T  6207219 gaaaagcaattctc 6207232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 289 - 402
Target Start/End: Complemental strand, 32691198 - 32691085
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    |||||||||||||||||||  ||||||||||||||||| ||  ||||| |||  ||||||| |||| |||||| ||||||||||||||||| ||||||||    
T  32691198 tcggcagttaactgccgccgatttcctaaaaacttcggcagttaactgtcgaggggcatttgcgtaatttacttgtgtggcacaaccaaaccaaatgtgg 32691099  T
Q  389 gaacatcaattctc 402  Q
    ||||| ||||||||    
T  32691098 gaacaacaattctc 32691085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 13382681 - 13382563
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||   ||| ||||| | |||||  ||| ||||||||||||||||| |||||| |||    
T  13382681 tttcctcggcagttaactgccgccggtttcctaaaaacttcgtcagtttactaccgaaggacatttgagtaatttactcgtgtggcacagccaaaccaaa 13382582  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||| ||||||||    
T  13382581 tgtgggaacaacaattctc 13382563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 17597545 - 17597663
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| |||||||||||||||||  |||||||| |||||   |||||  ||| ||||||||||||| |||   |||| | |    
T  17597545 tttcctcggcagttaactgccgccggtttcctaaaaacttcgacagcaaactaccgaagaacatttgagtaatttactcgtgtggtacagttaaactata 17597644  T
Q  384 tgtgggaacatcaattctc 402  Q
    |||||||||||||||||||    
T  17597645 tgtgggaacatcaattctc 17597663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 318 - 398
Target Start/End: Original strand, 30829706 - 30829786
Alignment:
Q  318 aaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaat 398  Q
    ||||||||||||  ||||| |||| |||||||||||||||||||||||||||||||||| || | ||||||||||| ||||    
T  30829706 aaacttcggtagttaactgtcgaagggcattttcgtattttactcgtgtggcacaaccatactatatgtgggaacagcaat 30829786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 2109569 - 2109451
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| |||   || |||||| |||||| ||  ||||||||| ||| ||||  ||| ||||||||||||||||| ||||||||||    
T  2109569 tttcctcggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgagaggtatttgagtaatttactcgtgtggcacagccaaacaaaa 2109471  T
Q  384 tgtgggaacatcaattctca 403  Q
     ||||||||| |||||||||    
T  2109470 agtgggaacaacaattctca 2109451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 28249937 - 28249819
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |   ||||| |||   ||||||  ||| ||||||||||||||||| |||||| |||    
T  28249937 tttcctcggcagttaactgccgccggttccctaaaaacttcggcatttaactgtcgaggagcatttgagtaatttactcgtgtggcacagccaaaccaaa 28249838  T
Q  384 tgtgggaacatcaattctc 402  Q
    ||||  |||| ||||||||    
T  28249837 tgtgtaaacaacaattctc 28249819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 30424146 - 30424198
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaatt 53  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  30424146 tacattcatttatcaattcctaaactatacatgcaatcatcaaaatgtcaatt 30424198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 13164281 - 13164397
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||| |||||||||| ||| ||||| |||    ||||||||  |||||||||  |||||||  ||| ||||||||||||||| | |||||| |||    
T  13164281 tttcctcgggagttaactgcagccggtttcataa----ttcggtagttaactgccgaggggcatttgagtaatttactcgtgtggcatagccaaactaaa 13164376  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  13164377 tgtgggaacaacaattctcaa 13164397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 403
Target Start/End: Complemental strand, 26712100 - 26711982
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||   ||| ||||| ||||||| ||||  |||||||| ||||||| ||  || | |    
T  26712100 tttcctcggcagttaactgccgccgatttcctaaaaacttcggcagtttactaccgaagggcatttccgtaacttactcgtttggcacagcc-taccata 26712002  T
Q  384 tgtgggaacatcaattctca 403  Q
    |||||||||| |||||||||    
T  26712001 tgtgggaacagcaattctca 26711982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 332 - 402
Target Start/End: Complemental strand, 11688118 - 11688048
Alignment:
Q  332 aactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||| ||   ||||||||||| ||||||||    
T  11688118 aactgccgaagggcattttggtattttactcgtgtggcacagccatactgtatgtgggaacaacaattctc 11688048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 375
Target Start/End: Complemental strand, 26350026 - 26349937
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaacc 375  Q
    |||||||||||||||||||||||| |||| ||  ||||||||| ||  ||||||||||  |||||||||||   |||||||||| |||||||    
T  26350026 tttcctcggcagttaactgccgccggtttact--aaacttcggcagttaactgccgaagagcattttcgtaaaatactcgtgtgacacaacc 26349937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 343 - 402
Target Start/End: Original strand, 6760951 - 6761010
Alignment:
Q  343 ggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||  ||| ||||||||||||||||| |||||| ||||||||||||| ||||||||    
T  6760951 ggcatttgagtaatttactcgtgtggcacagccaaaccaaatgtgggaacagcaattctc 6761010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 169 - 224
Target Start/End: Original strand, 22304977 - 22305032
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgag 224  Q
    |||||||||| |||||||||||||   ||||||| |||||||||||||||||||||    
T  22304977 ttgatttgctcgcaattcgtgaaagaagatttggcgaagatttgagagaaattgag 22305032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29821740 - 29821821
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaact 82  Q
    ||||||||||| | ||||| |||| ||||||| || | |||||| ||||||||   | ||||||||||||||||||||||||    
T  29821740 tacattcatttctaaattcataaattacacatacatttatcaaaatgtcaattcctagatcaaccctaaccacatacaaact 29821821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 404
Target Start/End: Complemental strand, 25554757 - 25554638
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||| ||||||||||||| |||   || |||||| |||||| ||  |||||||||  || ||||  ||| ||||||||||||||||| |||||  |||    
T  25554757 tttcctaggcagttaactgcagccgtatttctaaaa-cttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaagtaaa 25554659  T
Q  384 tgtgggaacatcaattctcaa 404  Q
     ||||||||| ||||||||||    
T  25554658 agtgggaacaacaattctcaa 25554638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 372
Target Start/End: Original strand, 26351117 - 26351204
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcaca 372  Q
    |||||||||||||||||||||||| |||| || |||||||||  ||  ||||| |||| | ||||||||||   |||||||||||||||    
T  26351117 tttcctcggcagttaactgccgccggtttact-aaaacttcgacagttaactgtcgaatgacattttcgtaaagtactcgtgtggcaca 26351204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Original strand, 6207081 - 6207136
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccg 339  Q
    ||||||||||| |||||||||||| || ||||||||||||||| ||  ||||||||    
T  6207081 tttcctcggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccg 6207136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 32691237 - 32691182
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccg 339  Q
    |||||||||| ||||||||||||| | |||||||||||||||| ||  ||||||||    
T  32691237 tttcctcggctgttaactgccgccggcttcctaaaaacttcggcagttaactgccg 32691182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 4 - 197
Target Start/End: Complemental strand, 3381131 - 3380939
Alignment:
Q  4 attcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaaaaa 103  Q
    ||||||| |||||| | ||||||||||||||||| || ||||||||||||     || || ||||||||||| |||| ||||| ||         ||||     
T  3381131 attcattcatcaatgcataaactacacatgcaatgatgaaattgtcaattcacttataaaacctaaccacatgcaaattactc-aatttttttaaaaaac 3381033  T
Q  104 tcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatgga 197  Q
    | ||| |||||||||||||||||| |||  ||||||| |    |||||||||||||||||||    ||||| |||| |||| ||||||||||||    
T  3381032 ttaacctaaacaaattaacattaaaattgcaatgattaatggtacttacttgtgataatgtggggatgattggcttacaatccgtgaaaatgga 3380939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 343 - 401
Target Start/End: Complemental strand, 8707975 - 8707917
Alignment:
Q  343 ggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattct 401  Q
    |||||||  ||| ||||||||||||||||  |||||| ||||||||||||| |||||||    
T  8707975 ggcatttgagtaatttactcgtgtggcacggccaaaccaaatgtgggaacaacaattct 8707917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 402
Target Start/End: Original strand, 15888821 - 15888937
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||| ||| |||| |||||| |||||||||  |||||||||| ||  |||  |||  ||||||||||  | || |||||| |||    
T  15888821 tttcctcggcagttaactgcagccggttttctaaaa-cttcggtagttaactgccgaa-ggtgtttgggtaaattactcgtgtttctcagccaaaccaaa 15888918  T
Q  384 tgtgggaacatcaattctc 402  Q
    ||||  |||||||||||||    
T  15888919 tgtgtaaacatcaattctc 15888937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 21600809 - 21600751
Alignment:
Q  147 acttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggatttggtga 205  Q
    |||||||||||||||||||    ||||| | |||||| |||||||||||||||||||||    
T  21600809 acttacttgtgataatgtggcgatgattggtttgcaaatcgtgaaaatggatttggtga 21600751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 6204701 - 6204758
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| |||||||||||||   || |||| ||||||||||||||| |||||||    
T  6204701 ttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaa 6204758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Complemental strand, 11688216 - 11688171
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccg 305  Q
    ||||||| |||| ||| |||||| ||||||||||||||||||||||    
T  11688216 ttctgcgttctggttatgttcagttttcctcggcagttaactgccg 11688171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 11691668 - 11691725
Alignment:
Q  169 ttgatttgcttgcaattcgtgaaaatggatttggtgaagatttgagagaaattgagaa 226  Q
    |||||||||| |||||||||||||   || |||| ||||||||||||||| |||||||    
T  11691668 ttgatttgctcgcaattcgtgaaagaagaattggcgaagatttgagagaacttgagaa 11691725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 301
Target Start/End: Complemental strand, 27616817 - 27616776
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaact 301  Q
    ||||||| |||| ||| |||||||||||||||||||||||||    
T  27616817 ttctgcgttctggttatgttcagatttcctcggcagttaact 27616776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 260 - 305
Target Start/End: Original strand, 30829622 - 30829667
Alignment:
Q  260 ttctgcgatctgtttaagttcagatttcctcggcagttaactgccg 305  Q
    ||||||| |||| ||| |||||| ||||||||||||||||||||||    
T  30829622 ttctgcgttctggttatgttcagttttcctcggcagttaactgccg 30829667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 97; Significance: 2e-47; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 8564 - 8361
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaattttgaaatcaaccctaaccacatacaaactactctaannnnnnnnnaa 100  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||         ||    
T  8564 tacattcatttatcaattcataaactatacatgcaatcatcaaattgtcaattttaaaatcaaccctaaccacatgcaaactactctaa-tttttttaaa 8466  T
Q  101 aaatcaacataaacaaattaacattaatattaaaatgattgacacaacttacttgtgataatgtgcacttgatttgcttgcaattcgtgaaaatggattt 200  Q
    || | ||| |||||||| ||||||||  |||||||| |||||  |||||||||||||||||||||   ||||||||||||||||||| ||||| || |||    
T  8465 aattaaacctaaacaaactaacattatcattaaaataattgatgcaacttacttgtgataatgtgtggttgatttgcttgcaattcgcgaaaacggcttt 8366  T
Q  201 ggtga 205  Q
    |||||    
T  8365 ggtga 8361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0744 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 284 - 404
Target Start/End: Original strand, 444 - 563
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||| || | |    
T  444 tttcctcggcagttaactgccgccggtttcttaaaaactt-ggtagcaaactgccgaagggcattttcgtattttactggtgtggcacaaccatactata 542  T
Q  384 tgtgggaacatcaattctcaa 404  Q
    |||||||||| ||||||||||    
T  543 tgtgggaacaacaattctcaa 563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 72; Significance: 2e-32; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 289 - 404
Target Start/End: Complemental strand, 84593 - 84479
Alignment:
Q  289 tcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgg 388  Q
    ||||||||||||||||||| ||| ||||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||| | ||||||    
T  84593 tcggcagttaactgccgccggtt-cctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtgg 84495  T
Q  389 gaacatcaattctcaa 404  Q
    ||||| ||||||||||    
T  84494 gaacagcaattctcaa 84479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 339
Target Start/End: Complemental strand, 84632 - 84577
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccg 339  Q
    ||||||||||| |||||||||||| || ||||||||||||||| ||  ||||||||    
T  84632 tttcctcggcacttaactgccgccggtgtcctaaaaacttcggcagttaactgccg 84577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1606 (Bit Score: 60; Significance: 3e-25; HSPs: 1)
Name: scaffold1606
Description:

Target: scaffold1606; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 311 - 402
Target Start/End: Original strand, 9 - 100
Alignment:
Q  311 ttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    ||||||||||| ||||||||||||||||||  |||||||| ||||||||||||||||||||| |||||| | ||||||||||| ||||||||    
T  9 ttcctaaaaacctcggtagcaaactgccgaggggcattttggtattttactcgtgtggcacagccaaactatatgtgggaacaacaattctc 100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 59; Significance: 1e-24; HSPs: 2)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 286 - 404
Target Start/End: Original strand, 11476 - 11594
Alignment:
Q  286 tcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatg 385  Q
    ||||||| ||| | |||||||| |||| ||||||||||||| ||  |||||||||| |||||||  ||| ||||||||||||||||| |||||| |||||    
T  11476 tcctcggtagtaagctgccgccggtttactaaaaacttcggcagttaactgccgaagggcatttaggtaatttactcgtgtggcacagccaaaccaaatg 11575  T
Q  386 tgggaacatcaattctcaa 404  Q
    |||||||| ||||||||||    
T  11576 tgggaacaacaattctcaa 11594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 284 - 340
Target Start/End: Complemental strand, 5383 - 5327
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccga 340  Q
    |||||||||||||||||||||||| |||||||  ||||||||| ||  |||||||||    
T  5383 tttcctcggcagttaactgccgccggtttccttcaaacttcggcagttaactgccga 5327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 56; Significance: 7e-23; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 287 - 402
Target Start/End: Complemental strand, 10701 - 10587
Alignment:
Q  287 cctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgt 386  Q
    ||||||||||||||||||||| |||| |||||| |||||| ||  || ||||||| |||||||  ||| |||||||||||| ||||||||||| ||||||    
T  10701 cctcggcagttaactgccgccggtttactaaaa-cttcggcagttaattgccgaagggcatttaagtaatttactcgtgtgacacaaccaaaccaaatgt 10603  T
Q  387 gggaacatcaattctc 402  Q
    ||||||| ||||||||    
T  10602 gggaacaacaattctc 10587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 50099 - 49981
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaa 383  Q
    |||||||||||||||||||||||| ||| |||||||||||||| |   ||||| |||   ||||||  ||| ||||||||||||||||| |||||| |||    
T  50099 tttcctcggcagttaactgccgccggttccctaaaaacttcggcatttaactgtcgaggagcatttgagtaatttactcgtgtggcacagccaaaccaaa 50000  T
Q  384 tgtgggaacatcaattctc 402  Q
    ||||  |||| ||||||||    
T  49999 tgtgtaaacaacaattctc 49981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 284 - 372
Target Start/End: Original strand, 236281 - 236368
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcaca 372  Q
    |||||||||||||| |||||||||||||| || |||||||||| ||  ||| |||||| ||||||||||||   |||||||||||||||    
T  236281 tttcctcggcagtttactgccgccagtttact-aaaacttcggcagttaaccgccgaagggcattttcgtaaagtactcgtgtggcaca 236368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 317 - 402
Target Start/End: Original strand, 69274 - 69359
Alignment:
Q  317 aaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    |||||||||| ||  |||||||||  || ||||  ||| ||||||||||||||||| |||||| ||| ||||||||||||||||||    
T  69274 aaaacttcggcagttaactgccgaggggtatttgagtaatttactcgtgtggcacagccaaaccaaaagtgggaacatcaattctc 69359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 356 - 404
Target Start/End: Complemental strand, 68395 - 68347
Alignment:
Q  356 tttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctcaa 404  Q
    ||||||| ||||||| | |||||| ||||||||||||| ||||||||||    
T  68395 tttactcatgtggcatagccaaaccaaatgtgggaacagcaattctcaa 68347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 251187 - 251239
Alignment:
Q  1 tacattcatttatcaattcctaaactacacatgcaatcatcaaattgtcaatt 53  Q
    ||||||||||||||||||| ||||||||||||||||| |||||| || |||||    
T  251187 tacattcatttatcaattcataaactacacatgcaattatcaaaatgccaatt 251239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0094 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0094
Description:

Target: scaffold0094; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 343 - 402
Target Start/End: Original strand, 237 - 296
Alignment:
Q  343 ggcattttcgtattttactcgtgtggcacaaccaaacaaaatgtgggaacatcaattctc 402  Q
    ||||||| |||| |||||| |||||||||| |||||| ||||||||||||| ||||||||    
T  237 ggcatttgcgtaatttacttgtgtggcacagccaaaccaaatgtgggaacaacaattctc 296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 374
Target Start/End: Complemental strand, 12434 - 12345
Alignment:
Q  284 tttcctcggcagttaactgccgccagtttcctaaaaacttcggtagcaaactgccgaaaggcattttcgtattttactcgtgtggcacaac 374  Q
    |||||||||||||||| ||||||| |||| ||||||  ||||  ||  |||||||||| |||||||| |||   |||||||||||||||||    
T  12434 tttcctcggcagttaattgccgccggtttactaaaat-ttcgacagttaactgccgaagggcatttttgtaaagtactcgtgtggcacaac 12345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University