View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2057_low_12 (Length: 459)
Name: NF2057_low_12
Description: NF2057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2057_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 19 - 328
Target Start/End: Original strand, 41661173 - 41661483
Alignment:
| Q |
19 |
tacccaatcacaagtccaaaaacatgagtaaattattcatacgtccataaaaagatatattgtatacgtacccggatgagatatagggtaaaacaagaat |
118 |
Q |
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| T |
41661173 |
tacccaatcacaggtgcaaaaacaggagtaaattattcatacgtccataaaaagatatattgtacacgtatcctggtgagatatagggtaaaacaagaat |
41661272 |
T |
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| Q |
119 |
ggtaaaacttcnnnnnnnnnnnnnnnnncacaattgtcaatctacaaattagtaagcatgaagtacacaaaaatgagtttctagaaacaacaagctaaga |
218 |
Q |
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| T |
41661273 |
ggtaaaacttcaaaaagaaaaaaaaaaacacaattgtcaatgtacaaattagtaagcatgaagtacacaaaaatgagtttccagagacaacaagctaaga |
41661372 |
T |
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| Q |
219 |
aatcaagcagtcaaagattaaaacatgttcaatcatatgcaagcaaacatcccacaagttaaaatattagtctagaaaata-agccatgtgttttgtcct |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| ||| |
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| T |
41661373 |
aatcaagcagtcaaagattaaaacatgttcaatcatatgcaagcaaacatcccacaagttaaaatattagtctacaaaatatagccatgtgttttgccct |
41661472 |
T |
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| Q |
318 |
agtatgagtcg |
328 |
Q |
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||||||||||| |
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| T |
41661473 |
agtatgagtcg |
41661483 |
T |
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