View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2057_low_29 (Length: 354)
Name: NF2057_low_29
Description: NF2057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2057_low_29 |
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Alignment Details
Target: chr7 (Bit Score: 273; Significance: 1e-152; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 273; E-Value: 1e-152
Query Start/End: Original strand, 1 - 338
Target Start/End: Complemental strand, 22725553 - 22725222
Alignment:
| Q |
1 |
aaaattaacttagggtgatgatttttccctatatatattcctctctagattttgctttatggaaggataccactnnnnnnntatttgatggtcttatgta |
100 |
Q |
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| T |
22725553 |
aaaattaacttagggtgatgatttttccctatatatattcctctctagatttagctttatggaaggataccactaaaaaaatatttgatggtcttatgta |
22725454 |
T |
|
| Q |
101 |
aataataacaataataattgttggatgcaaattgcaatttgacattatttaatttaattaaattttttctatacaaaaatcacttgataagatttttgtt |
200 |
Q |
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| T |
22725453 |
a-taataacaataataattgttggatgcaaattgcaatttgacattatttaattcaattaaattttttctatacaaaaatcacttgataagatttttgtt |
22725355 |
T |
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| Q |
201 |
aggtattttaaactaaaaatgattgcattcagtcacatatattattcacaaggttgagaattacaagactctcttatcttgattgaaatattcaaattcc |
300 |
Q |
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|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22725354 |
gggtattttaaactaaaaatgattgcattcaatcaca-----tattcacaaggttgagaattacaagactctcttatcttgattgaaatattcaaattcc |
22725260 |
T |
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| Q |
301 |
aacttcacattttgaattcgttttgcaaagtcagaatt |
338 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
22725259 |
aacttcacattttgaattcgttttgcaaagtcagaatt |
22725222 |
T |
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