View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2057_low_57 (Length: 240)
Name: NF2057_low_57
Description: NF2057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2057_low_57 |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 19 - 224
Target Start/End: Complemental strand, 9956520 - 9956315
Alignment:
| Q |
19 |
actcacacataaacttaaaaatttgaaaataataataattaatcagacgtaatcataagtgtagataccacatgttggatatgtcggacagaagacatgc |
118 |
Q |
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| T |
9956520 |
actcacacataaacttaaaaatttgaaaataataataattaattagacgtaatcataagtgtagataccacatgttggacatgtcggacataagacatgc |
9956421 |
T |
|
| Q |
119 |
tttctatcagaagtgccagtgcataacaagaatcattcattctacaccgtaaaaacttttagatcgagagtaacacctgtcctccaacgacggcaatgga |
218 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
9956420 |
tttctatcagaagtatcagtgcataacaagaatcattcattctacaccgtaaaaacttttagatcgagagtaacacctgtcctccaacgacggcaatgga |
9956321 |
T |
|
| Q |
219 |
gggaag |
224 |
Q |
| |
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|||||| |
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| T |
9956320 |
gggaag |
9956315 |
T |
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