View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2057_low_66 (Length: 222)

Name: NF2057_low_66
Description: NF2057
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2057_low_66
NF2057_low_66
[»] chr4 (39 HSPs)
chr4 (105-209)||(711962-712066)
chr4 (92-209)||(17619146-17619263)
chr4 (105-209)||(55272370-55272474)
chr4 (93-209)||(32728348-32728463)
chr4 (103-208)||(3756242-3756346)
chr4 (103-209)||(35037005-35037111)
chr4 (103-209)||(38851513-38851619)
chr4 (105-209)||(960864-960968)
chr4 (105-209)||(46827700-46827804)
chr4 (109-209)||(48435573-48435673)
chr4 (96-183)||(49229684-49229770)
chr4 (105-202)||(28988475-28988572)
chr4 (105-202)||(41878408-41878505)
chr4 (103-202)||(27893843-27893942)
chr4 (103-202)||(41327544-41327643)
chr4 (105-202)||(23035982-23036079)
chr4 (105-202)||(25051695-25051792)
chr4 (105-202)||(33703143-33703240)
chr4 (105-197)||(27864566-27864658)
chr4 (103-191)||(43514698-43514786)
chr4 (105-191)||(1771278-1771364)
chr4 (105-191)||(55966358-55966444)
chr4 (136-209)||(19879987-19880060)
chr4 (105-190)||(28982835-28982920)
chr4 (100-202)||(27550306-27550408)
chr4 (105-202)||(27316714-27316811)
chr4 (106-202)||(23204779-23204875)
chr4 (103-202)||(43949802-43949902)
chr4 (105-197)||(48463456-48463548)
chr4 (105-202)||(35017735-35017831)
chr4 (105-202)||(41847973-41848070)
chr4 (105-202)||(45490314-45490411)
chr4 (157-209)||(36004110-36004162)
chr4 (103-202)||(39631100-39631200)
chr4 (103-202)||(31680902-31681001)
chr4 (105-202)||(12496958-12497055)
chr4 (105-139)||(36004168-36004202)
chr4 (151-201)||(56215899-56215949)
chr4 (105-202)||(21687008-21687105)
[»] chr1 (24 HSPs)
chr1 (105-209)||(48119630-48119734)
chr1 (105-209)||(35003296-35003400)
chr1 (105-209)||(38335920-38336024)
chr1 (105-209)||(46168385-46168489)
chr1 (92-209)||(44112667-44112783)
chr1 (105-209)||(38113189-38113293)
chr1 (105-209)||(45427739-45427843)
chr1 (105-209)||(45639726-45639830)
chr1 (105-209)||(45705827-45705931)
chr1 (105-209)||(41065155-41065259)
chr1 (105-209)||(26585464-26585568)
chr1 (105-209)||(35000107-35000211)
chr1 (105-202)||(5489778-5489875)
chr1 (105-202)||(37814780-37814877)
chr1 (105-202)||(43571087-43571184)
chr1 (105-202)||(23989524-23989622)
chr1 (103-197)||(2497568-2497662)
chr1 (105-149)||(14427349-14427393)
chr1 (105-202)||(48498963-48499060)
chr1 (103-202)||(7447826-7447924)
chr1 (105-202)||(750306-750403)
chr1 (105-191)||(50448272-50448358)
chr1 (105-202)||(24769500-24769597)
chr1 (103-202)||(4401327-4401427)
[»] scaffold0003 (1 HSPs)
scaffold0003 (103-209)||(45713-45819)
[»] chr6 (18 HSPs)
chr6 (103-209)||(27441542-27441648)
chr6 (105-209)||(33242405-33242509)
chr6 (103-197)||(24203993-24204087)
chr6 (105-203)||(33253915-33254013)
chr6 (105-202)||(3213402-3213499)
chr6 (105-202)||(9698334-9698431)
chr6 (105-202)||(13743222-13743319)
chr6 (105-202)||(13748722-13748819)
chr6 (105-202)||(26466801-26466898)
chr6 (105-209)||(31109216-31109320)
chr6 (105-202)||(7273336-7273433)
chr6 (105-202)||(7292749-7292846)
chr6 (105-202)||(26670010-26670107)
chr6 (105-202)||(21293678-21293775)
chr6 (105-202)||(30014345-30014442)
chr6 (105-202)||(21279931-21280028)
chr6 (105-197)||(7367551-7367643)
chr6 (103-202)||(30735982-30736081)
[»] chr7 (28 HSPs)
chr7 (105-209)||(31513289-31513393)
chr7 (105-209)||(31408627-31408731)
chr7 (19-103)||(26899652-26899736)
chr7 (105-209)||(40236921-40237025)
chr7 (105-209)||(27535225-27535329)
chr7 (105-209)||(33384872-33384977)
chr7 (103-202)||(10573749-10573848)
chr7 (105-202)||(24001013-24001110)
chr7 (105-202)||(42538432-42538529)
chr7 (103-202)||(4638200-4638299)
chr7 (105-202)||(5194232-5194329)
chr7 (106-197)||(26898408-26898499)
chr7 (105-202)||(5810925-5811022)
chr7 (105-202)||(24280597-24280694)
chr7 (105-202)||(43317445-43317542)
chr7 (119-202)||(27393261-27393344)
chr7 (105-202)||(41861676-41861775)
chr7 (103-202)||(43343625-43343724)
chr7 (103-202)||(44416935-44417034)
chr7 (105-191)||(9216304-9216389)
chr7 (103-197)||(44326178-44326272)
chr7 (105-202)||(35069723-35069820)
chr7 (105-202)||(5015397-5015494)
chr7 (103-202)||(16180358-16180456)
chr7 (112-202)||(32029818-32029908)
chr7 (105-191)||(42972854-42972940)
chr7 (105-170)||(39998410-39998475)
chr7 (109-202)||(45326026-45326119)
[»] chr3 (26 HSPs)
chr3 (105-209)||(10457886-10457990)
chr3 (105-209)||(4190259-4190363)
chr3 (105-209)||(9434126-9434230)
chr3 (105-208)||(52627972-52628075)
chr3 (92-209)||(25996258-25996374)
chr3 (105-209)||(51757595-51757699)
chr3 (105-209)||(34791831-34791935)
chr3 (105-202)||(54237098-54237195)
chr3 (105-202)||(24688403-24688500)
chr3 (105-202)||(25413683-25413780)
chr3 (101-202)||(27748561-27748662)
chr3 (105-202)||(36150132-36150229)
chr3 (105-202)||(40480751-40480848)
chr3 (105-202)||(42394420-42394517)
chr3 (105-202)||(54246149-54246246)
chr3 (105-197)||(45126934-45127026)
chr3 (103-202)||(53581859-53581958)
chr3 (105-191)||(42100690-42100776)
chr3 (105-202)||(40808867-40808964)
chr3 (105-202)||(46941055-46941152)
chr3 (153-202)||(51249358-51249407)
chr3 (105-202)||(47191027-47191123)
chr3 (94-203)||(53273684-53273793)
chr3 (107-188)||(29558249-29558330)
chr3 (94-188)||(1078218-1078311)
chr3 (145-202)||(52629870-52629927)
[»] chr8 (28 HSPs)
chr8 (105-209)||(35181518-35181622)
chr8 (105-209)||(34304790-34304894)
chr8 (105-209)||(16603620-16603724)
chr8 (103-209)||(33629987-33630093)
chr8 (105-209)||(16358827-16358932)
chr8 (105-209)||(18066712-18066816)
chr8 (105-209)||(19386559-19386668)
chr8 (103-202)||(42295195-42295294)
chr8 (105-202)||(11582768-11582865)
chr8 (97-190)||(30912575-30912668)
chr8 (105-202)||(36743484-36743581)
chr8 (103-202)||(26125635-26125734)
chr8 (103-197)||(42699257-42699351)
chr8 (105-202)||(42197436-42197533)
chr8 (103-202)||(29800951-29801050)
chr8 (105-202)||(29705364-29705461)
chr8 (105-202)||(30660743-30660840)
chr8 (157-209)||(10678146-10678198)
chr8 (103-197)||(20148760-20148854)
chr8 (105-191)||(45397318-45397404)
chr8 (105-202)||(1375544-1375641)
chr8 (111-202)||(31384672-31384763)
chr8 (105-202)||(5754905-5755002)
chr8 (105-202)||(2165964-2166061)
chr8 (105-202)||(2546998-2547095)
chr8 (112-202)||(40528635-40528726)
chr8 (105-139)||(10678204-10678238)
chr8 (152-202)||(32328818-32328868)
[»] chr2 (29 HSPs)
chr2 (101-209)||(11825648-11825756)
chr2 (105-209)||(43114559-43114663)
chr2 (103-209)||(41281968-41282074)
chr2 (105-209)||(966828-966932)
chr2 (97-209)||(4299414-4299526)
chr2 (105-209)||(18491707-18491811)
chr2 (105-209)||(12415454-12415558)
chr2 (105-209)||(12427514-12427618)
chr2 (105-209)||(16803970-16804074)
chr2 (105-209)||(16843252-16843356)
chr2 (105-209)||(14285678-14285782)
chr2 (109-209)||(34895735-34895835)
chr2 (127-209)||(4451944-4452026)
chr2 (103-202)||(43490402-43490501)
chr2 (105-202)||(1750416-1750513)
chr2 (103-188)||(6518484-6518568)
chr2 (105-202)||(12302254-12302351)
chr2 (105-202)||(19047159-19047256)
chr2 (105-202)||(34817777-34817874)
chr2 (105-202)||(4764727-4764824)
chr2 (105-202)||(30838634-30838731)
chr2 (103-199)||(8896587-8896683)
chr2 (121-209)||(12531657-12531744)
chr2 (105-202)||(13780736-13780833)
chr2 (105-202)||(16096749-16096846)
chr2 (103-191)||(7070416-7070504)
chr2 (105-199)||(42026769-42026865)
chr2 (105-202)||(43335764-43335861)
chr2 (103-182)||(33229301-33229381)
[»] chr5 (13 HSPs)
chr5 (105-209)||(17208076-17208180)
chr5 (105-209)||(32473388-32473492)
chr5 (105-209)||(30622713-30622816)
chr5 (105-202)||(2614650-2614747)
chr5 (105-202)||(22512307-22512404)
chr5 (105-202)||(41334664-41334761)
chr5 (105-202)||(7617135-7617232)
chr5 (105-202)||(18033984-18034081)
chr5 (103-202)||(5256995-5257094)
chr5 (105-202)||(33801471-33801568)
chr5 (105-202)||(38470581-38470678)
chr5 (105-175)||(33855071-33855141)
chr5 (92-149)||(25915041-25915098)
[»] scaffold0100 (1 HSPs)
scaffold0100 (105-209)||(35450-35554)
[»] scaffold0038 (1 HSPs)
scaffold0038 (105-202)||(112657-112754)
[»] scaffold0385 (1 HSPs)
scaffold0385 (105-202)||(11253-11350)
[»] scaffold0187 (2 HSPs)
scaffold0187 (105-202)||(14189-14286)
scaffold0187 (105-202)||(24517-24614)
[»] scaffold0119 (1 HSPs)
scaffold0119 (105-202)||(687-784)
[»] scaffold0157 (1 HSPs)
scaffold0157 (105-202)||(23422-23519)


Alignment Details
Target: chr4 (Bit Score: 97; Significance: 8e-48; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 711962 - 712066
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  711962 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcacaaacatactttctctttc 712061  T
Q  205 atctc 209  Q
    |||||    
T  712062 atctc 712066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 92 - 209
Target Start/End: Complemental strand, 17619263 - 17619146
Alignment:
Q  92 atttattttaggaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaacca 191  Q
    |||| ||||| | ||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  17619263 atttcttttatggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaacca 17619164  T
Q  192 tactttctctttcatctc 209  Q
    ||||||||||||||||||    
T  17619163 tactttctctttcatctc 17619146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 55272474 - 55272370
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55272474 aaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 55272375  T
Q  205 atctc 209  Q
    |||||    
T  55272374 atctc 55272370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 32728348 - 32728463
Alignment:
Q  93 tttattttaggaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccat 192  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| | |||||||||||| ||||| ||||||||||||||||| |||    
T  32728348 tttattttaggaaaa-tgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcacaatcat 32728446  T
Q  193 actttctctttcatctc 209  Q
    |||||||||||||||||    
T  32728447 actttctctttcatctc 32728463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 103 - 208
Target Start/End: Complemental strand, 3756346 - 3756242
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||||||| ||||||||| |||||||| ||||    
T  3756346 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcacaatcatacttt-tctt 3756248  T
Q  203 tcatct 208  Q
    ||||||    
T  3756247 tcatct 3756242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 35037005 - 35037111
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||| |||||||||| ||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||||||| ||| ||||    
T  35037005 gaaaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatattttttctt 35037104  T
Q  203 tcatctc 209  Q
    || ||||    
T  35037105 tcttctc 35037111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 38851513 - 38851619
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||| | |||||||||||||| | || ||||||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||||    
T  38851513 gaaaaatgttacatgaatatcctttaatcatacatcataatgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctt 38851612  T
Q  203 tcatctc 209  Q
    |||||||    
T  38851613 tcatctc 38851619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 960968 - 960864
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||| ||| |||||||||||||||||| | || | |||||||||||||    
T  960968 aaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatcttataatcgtactttctctttc 960869  T
Q  205 atctc 209  Q
    |||||    
T  960868 atctc 960864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 46827804 - 46827700
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| |  |||||||||||| ||||||||| |||| ||||||||||    
T  46827804 aaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcattaagaacgttttggtaaatttatctcacaaacatattttctctttc 46827705  T
Q  205 atctc 209  Q
    |||||    
T  46827704 atctc 46827700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 209
Target Start/End: Complemental strand, 48435673 - 48435573
Alignment:
Q  109 tgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttcatct 208  Q
    ||||||||||||||| |||||||| |||||||||||||||| | |||||||| ||| || |||||||||||||||||||| |||||||| ||||||||||    
T  48435673 tgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctttcatct 48435574  T
Q  209 c 209  Q
    |    
T  48435573 c 48435573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 96 - 183
Target Start/End: Complemental strand, 49229770 - 49229684
Alignment:
Q  96 attttaggaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatct 183  Q
    |||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||||||    
T  49229770 attttaggaaaa-tgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 28988475 - 28988572
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| |||||||||  ||||||||| | ||||| || ||| |||||| ||||||||||||| ||||| ||||||||||    
T  28988475 aaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctcataaccacactttctctt 28988572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 41878408 - 41878505
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||| ||||| |||||||||  ||||||||| |||| ||||| |||||||||| ||| ||||||||||||||| || |||||||    
T  41878408 aaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcacaaccaaaccttctctt 41878505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 27893942 - 27893843
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||| |||||| |||| ||||||| || ||||||||| | ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  27893942 gaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatctt 27893843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 41327643 - 41327544
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||  |||||||||| ||| |||||| |||||||||  |||||| || ||| |||||||||||||||||||||| ||| ||||||||||    
T  41327643 gaaaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatctcacatccacactttctctt 41327544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 23035982 - 23036079
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||  |||||| || ||||||||||||||||| ||||  |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  23035982 aaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcacaaccacactttatctt 23036079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 25051695 - 25051792
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||| |||||||||| ||||| || ||||||| ||||||||| ||||| |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  25051695 aaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcacaatcacactttatctt 25051792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 33703143 - 33703240
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| |  |||| | |||||||||| | ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  33703143 aaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 33703240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 27864566 - 27864658
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatacttt 197  Q
    |||||||||||| |||||| |||| ||||||| || ||||||||| | ||| |||| |||||||||||||| ||||||||||||||| |||||    
T  27864566 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttt 27864658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 191
Target Start/End: Complemental strand, 43514786 - 43514698
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaacca 191  Q
    |||||||||||||||||||||||||| || ||||| | ||||||||||  ||| |||| || ||||||||||| |||||||||||||||    
T  43514786 gaaaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcacaacca 43514698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 1771364 - 1771278
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaacca 191  Q
    |||||||||||||||||||||||| || ||||||| ||||||||| | ||| ||||  ||||||||| ||| |||||||||||||||    
T  1771364 aaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcacaacca 1771278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 55966444 - 55966358
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaacca 191  Q
    |||||||||||| ||||||||||| ||||||| || ||||||||  | ||| |||| |||||||||||||| |||||||||||||||    
T  55966444 aaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcacaacca 55966358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 209
Target Start/End: Original strand, 19879987 - 19880060
Alignment:
Q  136 accctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttcatctc 209  Q
    |||||||||||||| | ||  |||| ||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  19879987 accctattgtacaccccatatattatggacattttggtaaattcatctcacaatcatactttctctttcatctc 19880060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 190
Target Start/End: Complemental strand, 28982920 - 28982835
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaacc 190  Q
    |||||||||||||||||||||||| |  ||||||||||||||||  | ||  |||| |||||||||||||| ||||||||||||||    
T  28982920 aaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcacaacc 28982835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 27550306 - 27550408
Alignment:
Q  100 taggaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttct 199  Q
    |||| |||||||||||||||||||||||| |  ||||| | |||||||||   ||| |||| |||||||||||||| ||||||| ||||||| ||||| |    
T  27550306 tagggaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatcttacaaccacactttat 27550405  T
Q  200 ctt 202  Q
    |||    
T  27550406 ctt 27550408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 27316811 - 27316714
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||| | |||||||||||| || ||||||  ||| ||||| | ||| ||||||||||||||||||| ||||||||| ||||| ||||| ||||    
T  27316811 aaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctcataaccacactttatctt 27316714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 202
Target Start/End: Complemental strand, 23204875 - 23204779
Alignment:
Q  106 aaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||| ||||| || |||| || ||||||||  ||||| |||| ||||||||| |||| ||||| ||||||||| ||||| ||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttttgtaagttcatgtcacaaccacactttatctt 23204779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 43949902 - 43949802
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaat-catacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctct 201  Q
    |||||||| |||||||||||||||| || | | ||||  ||||||||| | ||| |||| |||||||||||||| ||||||||||||||| ||||| |||    
T  43949902 gaaaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatct 43949803  T
Q  202 t 202  Q
    |    
T  43949802 t 43949802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 48463548 - 48463456
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatacttt 197  Q
    |||||||||||| |||||| |||| |||||||    ||||||||  | ||| |||| |||||||||||||| |||||||||||||||||||||    
T  48463548 aaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccatacttt 48463456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 35017735 - 35017831
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || || | |  ||||||||| | ||| || | |||||||||||||| ||||||||||||||| ||||| ||||    
T  35017735 aaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgtat-agggatattttggtaagttcatctcacaaccacactttatctt 35017831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 41847973 - 41848070
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||| ||||| |||||  ||| |||||  ||||||||| | ||||||||  || ||||||| ||||||||| |||||||| ||||||||||    
T  41847973 aaaatgttacaagaacatccttttttcacacacctcattgtacaccccatgcattagagacattttggcaaattcatcgcacaaccacactttctctt 41848070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 45490411 - 45490314
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||  |||| | ||||| || |||||||||   ||| |||| ||||| ||| |||||||||||||||||||| ||||| ||||    
T  45490411 aaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcacaaccacactttatctt 45490314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 36004162 - 36004110
Alignment:
Q  157 attaaggatattttggtaaattcatctcacaaccatactttctctttcatctc 209  Q
    |||| ||| |||||| |||||| ||||||||||||||||||||||||||||||    
T  36004162 attagggacattttgataaatttatctcacaaccatactttctctttcatctc 36004110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 39631100 - 39631200
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaat-catacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctct 201  Q
    |||||||| ||||||||| |||||| || | ||||||  |||||||||   ||| |||| |||||||||||||| ||||||||||||||| ||||| |||    
T  39631100 gaaaaatgatacatgaacccccttttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatct 39631199  T
Q  202 t 202  Q
    |    
T  39631200 t 39631200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 31680902 - 31681001
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||| | |||||| |||| |||||||  | ||||||||| |  |  |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  31680902 gaaaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcacaaccacactttatctt 31681001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 12496958 - 12497055
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||| |||||||||||||| || ||||| | ||||||||  | ||| ||||  ||||||||||||| ||||||| |||| || ||||| ||||    
T  12496958 aaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatctt 12497055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 139
Target Start/End: Complemental strand, 36004202 - 36004168
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccc 139  Q
    ||||||||||||||| |||||||||||||||||||    
T  36004202 aaaatgttacatgaataccctttaatcatacaccc 36004168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 56215949 - 56215899
Alignment:
Q  151 ctatgcattaaggatattttggtaaattcatctcacaaccatactttctct 201  Q
    ||||||||||  |||||||||| ||||| |||||||||||| |||||||||    
T  56215949 ctatgcattagcgatattttggaaaatttatctcacaaccacactttctct 56215899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 21687008 - 21687105
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||| |||||| |  ||||||| ||| ||||   |||| ||||   ||||||| |||| ||||||||| ||||||||||| ||||    
T  21687008 aaaatgttacatgaacatcctttatttttacaccccattatacatcttatgtattagaaatattttagtaagttcatctcataaccatactttatctt 21687105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 97; Significance: 8e-48; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 48119630 - 48119734
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48119630 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 48119729  T
Q  205 atctc 209  Q
    |||||    
T  48119730 atctc 48119734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 35003296 - 35003400
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  35003296 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcacaaccatactttctctttc 35003395  T
Q  205 atctc 209  Q
    |||||    
T  35003396 atctc 35003400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 38335920 - 38336024
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||||||||||||||||||||||||||| |||||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38335920 aaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 38336019  T
Q  205 atctc 209  Q
    |||||    
T  38336020 atctc 38336024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 46168385 - 46168489
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||||||||||||||||||||||| | |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46168385 aaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 46168484  T
Q  205 atctc 209  Q
    |||||    
T  46168485 atctc 46168489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 44112667 - 44112783
Alignment:
Q  92 atttattttaggaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaacca 191  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| |||||||||| |||||||||||||||    
T  44112667 atttatttaaggaaaa-tgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaacca 44112765  T
Q  192 tactttctctttcatctc 209  Q
    ||||||||||||||||||    
T  44112766 tactttctctttcatctc 44112783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 38113293 - 38113189
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||| || ||||||||||||||||||||||||||||||| |||||||    
T  38113293 aaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcacaaccatacttactctttc 38113194  T
Q  205 atctc 209  Q
    |||||    
T  38113193 atctc 38113189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 45427843 - 45427739
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||||||||||||||    
T  45427843 aaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 45427744  T
Q  205 atctc 209  Q
    |||||    
T  45427743 atctc 45427739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 45639830 - 45639726
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||||||||||| ||||||||||||| |||||||||||| | || ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  45639830 aaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcacaatcatactttctctttc 45639731  T
Q  205 atctc 209  Q
    |||||    
T  45639730 atctc 45639726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 45705827 - 45705931
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||| ||||||||||||||||||||||  ||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||||||    
T  45705827 aaaatgttatatgaacaccctttaatcatacattctattgtacactccatgcattatggacattttgataaattcatctcacaaccatactttctctttc 45705926  T
Q  205 atctc 209  Q
    |||||    
T  45705927 atctc 45705931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 41065155 - 41065259
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||  |||||||||| ||||||||||||||||||||||||||||    
T  41065155 aaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcacaaccatactttctctttc 41065254  T
Q  205 atctc 209  Q
     ||||    
T  41065255 ctctc 41065259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 26585464 - 26585568
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||| |||||||  ||||||||||||||  |||||||||| | |||||||||||||||||| ||||||||||||| ||| |||||||||||||||    
T  26585464 aaaatgttagatgaacattctttaatcatacactatattgtacaccccatgcattaaggatattttagtaaattcatctcgcaatcatactttctctttc 26585563  T
Q  205 atctc 209  Q
    |||||    
T  26585564 atctc 26585568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 35000211 - 35000107
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||| ||||||||||||| |||||||| |||  ||| |||| ||| |||||| |||||| |||||||||||||||||||||||||    
T  35000211 aaaatgttacatgaacaccttttaatcatacactctattgtatacttcatgtattagggacattttgataaatttatctcacaaccatactttctctttc 35000112  T
Q  205 atctc 209  Q
    |||||    
T  35000111 atctc 35000107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 5489778 - 5489875
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || |||| || ||||||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  5489778 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 5489875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 37814780 - 37814877
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||| ||||||||||| ||||||| |  ||||||||| | ||| ||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  37814780 aaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 37814877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 43571184 - 43571087
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| | ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  43571184 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 43571087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 23989622 - 23989524
Alignment:
Q  105 aaaatgttacatgaacaccctttaat-catacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||||||| || ||||||| | |||||| || ||||| |||| ||||||||||||||||| |||||||||||| ||||| ||||    
T  23989622 aaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctcacaaccacactttatctt 23989524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 2497662 - 2497568
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatacttt 197  Q
    |||||||||||||| |||||| |||| |||||||  | ||||||||| | ||  ||||||||||||||||||| ||||||||||||||| |||||    
T  2497662 gaaaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcacaaccacacttt 2497568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 105 - 149
Target Start/End: Original strand, 14427349 - 14427393
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacac 149  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  14427349 aaaatgttacatgaacaccctttaatcatacaccctattgtacac 14427393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 48499060 - 48498963
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||| ||||| |  ||||| | |||||||||   ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  48499060 aaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 48498963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 7447826 - 7447924
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||| |||||| || |||| || ||||||||| | ||| ||||  ||||||||| ||| ||||||||||||||| ||||| ||||    
T  7447826 gaaaaatgttacatgaacatcctttattcctacatcccattgtacac-ccatgtattacagatattttgataagttcatctcacaaccacactttatctt 7447924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 750403 - 750306
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||| |||||||||||   || ||||||| ||||||||| | ||| || | |||||||||| ||||||||||||| ||||| ||||| ||||    
T  750403 aaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctcaaaaccacactttatctt 750306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 191
Target Start/End: Complemental strand, 50448358 - 50448272
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaacca 191  Q
    |||||||||||||||||| ||||| |  ||||| | |||||||||  |||| |||| ||||||||| |||| ||||||| |||||||    
T  50448358 aaaatgttacatgaacactctttatttctacactccattgtacaccttatgtattagggatatttttgtaagttcatcttacaacca 50448272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 24769597 - 24769500
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||| |||||||||| |||| |  ||||| | ||||||||| | ||| |||| |||||||||||||| ||| | ||||||||| ||||| ||||    
T  24769597 aaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattttggtaagttcttatcacaaccacactttatctt 24769500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 4401327 - 4401427
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaat-catacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctct 201  Q
    |||||||| ||||||||||| |||| || | |||||   ||||||||| | ||| ||||  ||||||||||||| ||||||||||||||| ||||| |||    
T  4401327 gaaaaatgatacatgaacactcttttattcctacacttcattgtacaccccatgtattagagatattttggtaagttcatctcacaaccacactttatct 4401426  T
Q  202 t 202  Q
    |    
T  4401427 t 4401427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 95; Significance: 1e-46; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 45819 - 45713
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  45819 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 45720  T
Q  203 tcatctc 209  Q
    |||||||    
T  45719 tcatctc 45713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 95; Significance: 1e-46; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 103 - 209
Target Start/End: Original strand, 27441542 - 27441648
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27441542 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcacaaccatactttctctt 27441641  T
Q  203 tcatctc 209  Q
    |||||||    
T  27441642 tcatctc 27441648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 33242405 - 33242509
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||| |||||||||||||| |||||||||| | ||| |||||||| ||||||||||||||||||||||| |||||||||||||||    
T  33242405 aaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcacaaacatactttctctttc 33242504  T
Q  205 atctc 209  Q
    |||||    
T  33242505 atctc 33242509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 103 - 197
Target Start/End: Complemental strand, 24204087 - 24203993
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatacttt 197  Q
    ||||||||||||||||||||| |||| || ||||||||||||||||||| ||| |||| |||||||||||||| ||||||||||||||| |||||    
T  24204087 gaaaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcacaaccacacttt 24203993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 105 - 203
Target Start/End: Original strand, 33253915 - 33254013
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctcttt 203  Q
    ||||||||||||||||||| |||||||| |||||||||||||||| | |||||||| ||| || |||||||||||||||||||| |||||||| |||||    
T  33253915 aaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatcttt 33254013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 3213402 - 3213499
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||| ||||||||||| ||||||| |  ||||||||| | ||| ||||||||||||||||||||||||| ||||||||||||||| ||||    
T  3213402 aaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcacaaccatactttatctt 3213499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 9698431 - 9698334
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || |||| || ||||||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  9698431 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 9698334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 13743319 - 13743222
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||| |||| ||||||| || ||||||||| | ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  13743319 aaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 13743222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 13748819 - 13748722
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||| |||| ||||||| || ||||||||| | ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  13748819 aaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 13748722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 26466801 - 26466898
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||| ||||||||||| || ||||||| ||||||||||| ||| |||| || ||||||||||| ||||||||||||||| ||||| ||||    
T  26466801 aaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcacaaccacactttatctt 26466898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 31109320 - 31109216
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||||||||||||||||||||||||| || ||| ||||| | ||||| || |||||||||| |||||||| || || |||| | ||||||||||    
T  31109320 aaaatgttacatgaacaccctttaatcatacatcccattatacaccccatgcactagggatattttgataaattcaacttacgaccacattttctctttc 31109221  T
Q  205 atctc 209  Q
    |||||    
T  31109220 atctc 31109216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 7273433 - 7273336
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || |||||| |||||||||| | ||| ||||  ||||||||||||| |||||||||||| || ||||| ||||    
T  7273433 aaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcacaatcacactttatctt 7273336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 7292749 - 7292846
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||| ||||||| |||| |||||||||  ||| ||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  7292749 aaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 7292846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 26670107 - 26670010
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || ||||||  |||||||||   ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  26670107 aaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 26670010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 21293775 - 21293678
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||| ||||||||||| |||||||    | ||||||| | ||| ||||||||||||||||||||||||| ||||||||| ||||| ||||    
T  21293775 aaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcacaaccacactttatctt 21293678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 30014345 - 30014442
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || |||| || ||| ||||  | ||| |||| | |||||||||||| ||||||||||||||||||||| ||||    
T  30014345 aaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcacaaccatactttatctt 30014442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 21279931 - 21280028
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| |  ||||  | |||| |||  | ||| |||| |||||||||||||||||||||||||||||| ||||| ||||    
T  21279931 aaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcacaaccacactttatctt 21280028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 105 - 197
Target Start/End: Original strand, 7367551 - 7367643
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatacttt 197  Q
    ||||||||| ||||||| | |||| |||||||||  ||||||||  | ||| |||| |||||||||||||| ||||||||||||||| |||||    
T  7367551 aaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccacacttt 7367643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 30735982 - 30736081
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||||  |||| || ||||||| |||||||||   ||| ||||  ||||||||||||| |||||||||||| || ||||| ||||    
T  30735982 gaaaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcacaatcacactttatctt 30736081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 89; Significance: 5e-43; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 31513289 - 31513393
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||||||||||| ||||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31513289 aaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 31513388  T
Q  205 atctc 209  Q
    |||||    
T  31513389 atctc 31513393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 31408731 - 31408627
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||||||||||||||||| ||||||||||  | ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31408731 aaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcacaaccatactttctctttc 31408632  T
Q  205 atctc 209  Q
    |||||    
T  31408631 atctc 31408627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 19 - 103
Target Start/End: Original strand, 26899652 - 26899736
Alignment:
Q  19 actacttccattaagatatttaacacagctgcattttatgagagctacaagaaatctcttactatttcatccaatttattttagg 103  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26899652 actacttccattaagatattaaaaacagctgcattttatgagagctacaagaaatctcttactatttcatccaatttattttagg 26899736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 40236921 - 40237025
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||||||||||||||||||||||||| |||||||||||| | |||||||| ||| |||||||||| ||||||||||||||||| ||||||||||    
T  40236921 aaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatattttctctttc 40237020  T
Q  205 atctc 209  Q
    |||||    
T  40237021 atctc 40237025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 27535329 - 27535225
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| |||  |||| || |||||||||| ||||||||||||| ||||||||||||||    
T  27535329 aaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcacaactatactttctctttc 27535230  T
Q  205 atctc 209  Q
    |||||    
T  27535229 atctc 27535225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 33384872 - 33384977
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccc-tattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctcttt 203  Q
    ||||||||||||||||| | ||||||||||||||| ||||||| |||| |||||||| ||| ||||||||||||||||||||||| ||||||||||||||    
T  33384872 aaaatgttacatgaacatcatttaatcatacacccctattgtatactccatgcattagggacattttggtaaattcatctcacaaacatactttctcttt 33384971  T
Q  204 catctc 209  Q
    ||||||    
T  33384972 catctc 33384977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 10573749 - 10573848
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||| ||||||||||| ||||||| |||||||||||| | ||| |||| | |||||||||||||||||||||||||||| ||||| ||||    
T  10573749 gaaaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcacaaccacactttatctt 10573848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 24001110 - 24001013
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || |||| || ||||||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  24001110 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 24001013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 42538529 - 42538432
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || |||| || ||||||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  42538529 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42538432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 4638299 - 4638200
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||||| |||| |||||||| | ||||||||| | ||  |||| |||||||||||||| ||||||||||||||||||||| ||||    
T  4638299 gaaaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcacaaccatactttatctt 4638200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 5194329 - 5194232
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||| |||| |||||||||  ||||||||| |||||  |||||||||||||| |||||||||||||||| || |||| |||||    
T  5194329 aaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcacaatcacacttactctt 5194232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 106 - 197
Target Start/End: Complemental strand, 26898499 - 26898408
Alignment:
Q  106 aaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatacttt 197  Q
    |||||||||||||||||| |||| |||||||||| |||||||| || ||| |||| |||||||||||||| ||||||| ||||||| |||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatcttacaaccacacttt 26898408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 5811022 - 5810925
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||| ||||||||| || ||||||| ||||||||| ||||  |||| |||||||||| ||| ||||||||||||||| ||||| ||||    
T  5811022 aaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcacaaccacactttatctt 5810925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 24280694 - 24280597
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||  | ||||| ||   ||||||||||||||||||||||||| || ||||||||||    
T  24280694 aaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcacaatcacactttctctt 24280597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 43317445 - 43317542
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||| |||| |||||||||  ||||||||  |||||| ||| |||||||||| |||||||||||||||| || |||| |||||    
T  43317445 aaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcacaatcacacttactctt 43317542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 27393344 - 27393261
Alignment:
Q  119 acaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||| || |||| |||||||||||||||||| |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  27393344 acaccctttattcctacatcctattgtacactctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 27393261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 41861676 - 41861775
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcatta-ag-gatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||| ||||| |||| || ||||||||||||| || |||||||||||| ||||| ||||    
T  41861676 aaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtattatagagatattttggtaagtttatctcacaaccacactttatctt 41861775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 43343724 - 43343625
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||| | |||| |  ||||||||||||||||| | ||| |||| |||||||||| ||| ||||||||||||||| ||||| ||||    
T  43343724 gaaaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 43343625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 44417034 - 44416935
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||| | |||| |  ||||||||||||||||| | ||| |||| |||||||||| ||| ||||||||||||||| ||||| ||||    
T  44417034 gaaaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 44416935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 9216304 - 9216389
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaacca 191  Q
    |||||||||||||||||||||||| || || | |||||||||||| | ||||||||  ||||||||||||| |||||||||||||||    
T  9216304 aaaatgttacatgaacaccctttattcctatatcctattgtacac-ccatgcattagagatattttggtaagttcatctcacaacca 9216389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 44326178 - 44326272
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatacttt 197  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||||   ||  |||| |||||||||||||| ||||||||||||||| |||||    
T  44326178 gaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacacttt 44326272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 35069723 - 35069820
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||| ||||| || ||||||  |||||||||   ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  35069723 aaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 35069820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 5015397 - 5015494
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||| ||||| |  ||||| | |||||||||   ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  5015397 aaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 5015494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 16180456 - 16180358
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||| |||||| |||| || ||||||| ||||||||| | | | ||||   |||||||||||||||||||||||||||| ||||| ||||    
T  16180456 gaaaaatgttacatcaacaccatttattcctacaccc-attgtacaccccacgtattataaatattttggtaaattcatctcacaaccacactttatctt 16180358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 32029908 - 32029818
Alignment:
Q  112 tacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||| |||||  |||| || ||||||| ||||||||| | ||| |||| |||||||||||||||||||||| ||||||| ||||| ||||    
T  32029908 tacataaacactttttattcctacaccccattgtacaccccatgtattagggatattttggtaaattcatctaacaaccacactttatctt 32029818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 42972854 - 42972940
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaacca 191  Q
    |||||||||| |||||| |||||| || ||||| | |||||||||   ||| |||| |||||||||||||| |||||||||||||||    
T  42972854 aaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcacaacca 42972940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 39998410 - 39998475
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatatttt 170  Q
    ||||||||||||||||||  |||||||||||| |||||||||||| | ||| |||| |||||||||    
T  39998410 aaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatttt 39998475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 202
Target Start/End: Original strand, 45326026 - 45326119
Alignment:
Q  109 tgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||| |||||| |||| ||||||| |  ||||||||| | ||  |||| |||||||||||||| |||||||||||| || ||||| ||||    
T  45326026 tgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctcacaatcacactttatctt 45326119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 89; Significance: 5e-43; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 10457990 - 10457886
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10457990 aaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcacaaccatactttctctttc 10457891  T
Q  205 atctc 209  Q
    |||||    
T  10457890 atctc 10457886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 4190363 - 4190259
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||  |||| ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  4190363 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcacaaccatactttctctttc 4190264  T
Q  205 atctc 209  Q
    |||||    
T  4190263 atctc 4190259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 9434126 - 9434230
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| ||| |||||||||| ||||||||||||||||||||||||||||    
T  9434126 aaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 9434225  T
Q  205 atctc 209  Q
    |||||    
T  9434226 atctc 9434230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 105 - 208
Target Start/End: Complemental strand, 52628075 - 52627972
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||   |||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  52628075 aaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcacaatcatactttctctttc 52627976  T
Q  205 atct 208  Q
    ||||    
T  52627975 atct 52627972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 92 - 209
Target Start/End: Original strand, 25996258 - 25996374
Alignment:
Q  92 atttattttaggaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaacca 191  Q
    ||||| |||||||||| |||||||||||||||||||||||||||| | |||||||||| | ||  |||||||| ||||||||||||||||||||||||||    
T  25996258 atttaatttaggaaaa-tgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcacaacca 25996356  T
Q  192 tactttctctttcatctc 209  Q
    || |||||||||||||||    
T  25996357 tattttctctttcatctc 25996374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 51757595 - 51757699
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||| |||||| ||||||||||||||||||||||||||||||||   |||||||| ||| ||||| |||| ||||||||||||||||||||||||||||    
T  51757595 aaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctcacaaccatactttctctttc 51757694  T
Q  205 atctc 209  Q
    |||||    
T  51757695 atctc 51757699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 34791831 - 34791935
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||   |||||||| ||| |||||  ||| ||||||||||||||||||||||||||||    
T  34791831 aaaatgttacatgaacaccctttaatcatacaccatattgtaaacctcatgcattagggacattttaataatttcatctcacaaccatactttctctttc 34791930  T
Q  205 atctc 209  Q
    |||||    
T  34791931 atctc 34791935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 54237098 - 54237195
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || |||| || ||||||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  54237098 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 54237195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 24688500 - 24688403
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| |  ||||| | ||||||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  24688500 aaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 24688403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 25413683 - 25413780
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || ||||||| |||||||||  |||| |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  25413683 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 25413780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 202
Target Start/End: Original strand, 27748561 - 27748662
Alignment:
Q  101 aggaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctc 200  Q
    ||||||||||||||||||||||| |||| |||||||||  ||| |||||  |||| |||| |||||||||||||| ||||||||||||| ||||||| ||    
T  27748561 aggaaaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcacaacaatactttatc 27748660  T
Q  201 tt 202  Q
    ||    
T  27748661 tt 27748662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 36150132 - 36150229
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||| |||||||| |||||||||| ||| ||||| ||||| || | |||||||||||||| ||||||||||||||| ||||| ||||    
T  36150132 aaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcacaaccacactttatctt 36150229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 40480751 - 40480848
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| |||||  ||| ||||||||  ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  40480751 aaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 40480848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 42394517 - 42394420
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || ||||  | ||||||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  42394517 aaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42394420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 54246246 - 54246149
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || ||||||| ||||||||| ||||| ||||  |||||||| |||| ||||||||||||||| ||||| ||||    
T  54246246 aaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcacaaccacactttatctt 54246149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 45127026 - 45126934
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatacttt 197  Q
    |||||||||||| ||||||||||| ||||||| || ||||||||| | ||| |||| |||||||||||||| ||||||||||||||| |||||    
T  45127026 aaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacacttt 45126934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 53581958 - 53581859
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||| ||||| |||||||| | ||||||||  ||||| |||| |||||||||| ||| ||||||||||||||| ||||| ||||    
T  53581958 gaaaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcacaaccacactttatctt 53581859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 42100690 - 42100776
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaacca 191  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| | ||| |||| |||||||||||||| |||||||||||||||    
T  42100690 aaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcacaacca 42100776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 40808867 - 40808964
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||| |||||| |||| || ||||||| ||||||||| | ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  40808867 aaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 40808964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 46941055 - 46941152
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || |||| |  ||||||||| | ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  46941055 aaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 46941152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 202
Target Start/End: Original strand, 51249358 - 51249407
Alignment:
Q  153 atgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  51249358 atgcattaaggatattttggtaaattcatctcacaaccacactttctctt 51249407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 47191123 - 47191027
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || ||||||  ||||||||| | ||| ||||  ||||||||| ||| ||||||||||||||| ||||| ||||    
T  47191123 aaaatgttacatgaacaccctttattcctacacctcattgtacac-ccatgtattagagatattttgataagttcatctcacaaccacactttatctt 47191027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 94 - 203
Target Start/End: Complemental strand, 53273793 - 53273684
Alignment:
Q  94 ttattttaggaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccata 193  Q
    |||||||| | ||||||||| ||||||| | |||| || || |||  ||||||||  | ||| |||| |||||||||||||| |||||||||||||||||    
T  53273793 ttattttaaggaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaaccata 53273694  T
Q  194 ctttctcttt 203  Q
    |||| |||||    
T  53273693 ctttatcttt 53273684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 188
Target Start/End: Complemental strand, 29558330 - 29558249
Alignment:
Q  107 aatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaa 188  Q
    ||||||| |||||||||||||| ||||||| |  ||||||||| ||||  |||| | |||| ||||||||||||||||||||    
T  29558330 aatgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaaattcatctcacaa 29558249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 94 - 188
Target Start/End: Original strand, 1078218 - 1078311
Alignment:
Q  94 ttattttaggaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaa 188  Q
    |||||||| |||||||||||||||||||||||||| || | ||||  |||||||||   ||| ||| |||||||||| |||  ||||||||||||    
T  1078218 ttattttatgaaaaatgttacatgaacaccctttattcctgcacctcattgtacacctaatgtatt-aggatatttttgtaggttcatctcacaa 1078311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 202
Target Start/End: Original strand, 52629870 - 52629927
Alignment:
Q  145 tacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||| ||||| |||||||||||||| |||| ||||||||||||||| ||||| ||||    
T  52629870 tacaccctatgtattaaggatatttttgtaagttcatctcacaaccacactttatctt 52629927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 35181518 - 35181622
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| |||||||||| ||||||||||||||||||||||||||||    
T  35181518 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 35181617  T
Q  205 atctc 209  Q
    |||||    
T  35181618 atctc 35181622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 34304790 - 34304894
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| ||| |||||||||| ||||||||||||||||||||||||||||    
T  34304790 aaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 34304889  T
Q  205 atctc 209  Q
    |||||    
T  34304890 atctc 34304894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 16603724 - 16603620
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||| | ||||||||| || ||||||||||||||||||||||||||||||| |||||||    
T  16603724 aaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcacaaccatacttactctttc 16603625  T
Q  205 atctc 209  Q
    |||||    
T  16603624 atctc 16603620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 33630093 - 33629987
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||| |||||||||| ||| ||||| |||| ||||||||||||| ||||||||||||    
T  33630093 gaaaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcacaactatactttctctt 33629994  T
Q  203 tcatctc 209  Q
    |||||||    
T  33629993 tcatctc 33629987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 16358932 - 16358827
Alignment:
Q  105 aaaatgttacat-gaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctcttt 203  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||  | |||||||||| |||||||| ||||||||||||||||||||||||||| |||    
T  16358932 aaaatgttacattgaagaccctttaatcatacaccctattgtacatcccatgcattaagaatattttgataaattcatctcacaaccatactttcttttt 16358833  T
Q  204 catctc 209  Q
    ||||||    
T  16358832 catctc 16358827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 18066816 - 18066712
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||||||||||||||||  ||||||||||  | ||| |||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  18066816 aaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcacaaccatactttctctttc 18066717  T
Q  205 atctc 209  Q
    |||||    
T  18066716 atctc 18066712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 19386668 - 19386559
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactct-----atgcattaaggatattttggtaaattcatctcacaaccatactttct 199  Q
    ||||||||||||||||||||||||||||||||||||||| |||  |||     |||||||||| || ||||| ||||||||||||||||| |||||||||    
T  19386668 aaaatgttacatgaacaccctttaatcatacaccctattatactttctctttcatgcattaagaatgttttgataaattcatctcacaactatactttct 19386569  T
Q  200 ctttcatctc 209  Q
    ||||||||||    
T  19386568 ctttcatctc 19386559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 42295195 - 42295294
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||||| || ||||||  ||||||||||| ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  42295195 gaaaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42295294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 11582768 - 11582865
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || |||| || ||||||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  11582768 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 11582865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 97 - 190
Target Start/End: Complemental strand, 30912668 - 30912575
Alignment:
Q  97 ttttaggaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaacc 190  Q
    |||||||||||||||||||||||||||||||| || ||||||| ||||||||||  ||| |||| || ||||||||||| ||||||||||||||    
T  30912668 ttttaggaaaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcacaacc 30912575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 36743581 - 36743484
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || |||| || ||||||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  36743581 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 36743484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 26125635 - 26125734
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||| ||||||||||| |||||||  | ||||||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  26125635 gaaaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 26125734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 42699257 - 42699351
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatacttt 197  Q
    |||||||||||||||||||||||||| || ||||||| |||||||||  |||| |||| ||||||||| |||| ||||||||||||||| |||||    
T  42699257 gaaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcacaaccacacttt 42699351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 42197533 - 42197436
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||| |||| || ||||||| |||| |||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  42197533 aaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcacaaccacactttatctt 42197436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 29801050 - 29800951
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||| |||||| |||| ||||||| || ||||||||| | ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  29801050 gaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 29800951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 29705364 - 29705461
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| |  ||||||| ||||||||| | ||| |||| |||||||||| ||| ||||||||||||||| ||||| ||||    
T  29705364 aaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcacaaccacactttatctt 29705461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 30660840 - 30660743
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| |  |||| || ||||||||| ||||| |||| |||||||||||||| ||||||| ||||||| ||||| ||||    
T  30660840 aaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatcttacaaccacactttatctt 30660743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 157 - 209
Target Start/End: Complemental strand, 10678198 - 10678146
Alignment:
Q  157 attaaggatattttggtaaattcatctcacaaccatactttctctttcatctc 209  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10678198 attaaggacattttggtaaattcatctcacaaccatactttctctttcatctc 10678146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 103 - 197
Target Start/End: Original strand, 20148760 - 20148854
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatacttt 197  Q
    |||||||||||||| ||||||||||| ||||||| || |||||||||   ||  |||| |||||||||||||| ||||||||||||||| |||||    
T  20148760 gaaaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcacaaccacacttt 20148854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 105 - 191
Target Start/End: Original strand, 45397318 - 45397404
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaacca 191  Q
    |||||||||| ||||||||||||| || ||||||| ||| ||||| ||||| |||| ||||||||| |||| |||||||||||||||    
T  45397318 aaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcacaacca 45397404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 1375544 - 1375641
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||| ||||||||||||| |||| |||||||||| ||||||||| | ||  |||| ||||||||||||||||| |||||||||| | ||||| ||||    
T  1375544 aaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcacaactacactttatctt 1375641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 111 - 202
Target Start/End: Original strand, 31384672 - 31384763
Alignment:
Q  111 ttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||| || ||||  ||||||||||| | ||| |||| | |||||||||||| ||||||||||||||| ||||| ||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcacaaccacactttatctt 31384763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 5754905 - 5755002
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||| |||| || |||| || ||||||||  | ||  |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  5754905 aaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcacaaccacactttatctt 5755002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 2166061 - 2165964
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||| ||||||||||||| |||| || ||||||| |||||| || | ||| ||||  ||||||||||||| ||||||||| ||||| ||||| ||||    
T  2166061 aaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctcataaccacactttatctt 2165964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 2546998 - 2547095
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||| ||||| |  ||||| | |||||||||   ||| |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  2546998 aaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcacaaccacactttatctt 2547095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 202
Target Start/End: Complemental strand, 40528726 - 40528635
Alignment:
Q  112 tacatgaacaccctttaat-catacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||| || || | |||| ||||||||| | ||  |||| ||| |||||| |||||| |||||||||||| ||||||||||    
T  40528726 tacatgaacacccttttattcacaaaccccattgtacaccccatatattagggacattttgataaatttatctcacaaccacactttctctt 40528635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 105 - 139
Target Start/End: Complemental strand, 10678238 - 10678204
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccc 139  Q
    ||||||||||||||| |||||||||||||||||||    
T  10678238 aaaatgttacatgaataccctttaatcatacaccc 10678204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 202
Target Start/End: Complemental strand, 32328868 - 32328818
Alignment:
Q  152 tatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||| | |||||||||||| || |||||||||| ||||||||||||    
T  32328868 tatgcattaggaatattttggtaagtttatctcacaactatactttctctt 32328818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 101 - 209
Target Start/End: Complemental strand, 11825756 - 11825648
Alignment:
Q  101 aggaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| |||||||||| |||||||||||| |||||||||||    
T  11825756 aggaaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaatcatactttctc 11825657  T
Q  201 tttcatctc 209  Q
    |||||||||    
T  11825656 tttcatctc 11825648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 43114559 - 43114663
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| |||||||||| ||||||||||||||||||||||||||||    
T  43114559 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcacaaccatactttctctttc 43114658  T
Q  205 atctc 209  Q
    |||||    
T  43114659 atctc 43114663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 103 - 209
Target Start/End: Complemental strand, 41282074 - 41281968
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| ||| |||||| ||| ||||||||||||||||||||||||||    
T  41282074 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcacaaccatactttctctt 41281975  T
Q  203 tcatctc 209  Q
    |||||||    
T  41281974 tcatctc 41281968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 966932 - 966828
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| |  |||||||||||||||||||||| |||||||||||||||    
T  966932 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcacaaacatactttctctttc 966833  T
Q  205 atctc 209  Q
    |||||    
T  966832 atctc 966828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 97 - 209
Target Start/End: Complemental strand, 4299526 - 4299414
Alignment:
Q  97 ttttaggaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactt 196  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||||||| |||||||    
T  4299526 ttttacgaaaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcacaatcatactt 4299427  T
Q  197 tctctttcatctc 209  Q
     |||||| |||||    
T  4299426 actctttaatctc 4299414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 18491707 - 18491811
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||   |||||||||| | ||||||||||||||||||||||||||||||| |||||||    
T  18491707 aaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcacaaccatacttactctttc 18491806  T
Q  205 atctc 209  Q
    |||||    
T  18491807 atctc 18491811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 12415558 - 12415454
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||||||||||||||||||||||||||| |||||||||| | |||||||| ||| |||||||||| || |||||||||||||||||||||||||    
T  12415558 aaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctttc 12415459  T
Q  205 atctc 209  Q
    |||||    
T  12415458 atctc 12415454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 12427618 - 12427514
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||||||||||||||||||||||||||| |||||||||| | |||||||| ||| |||||||||| || |||||||||||||||||||||||||    
T  12427618 aaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcacaaccatactttctctttc 12427519  T
Q  205 atctc 209  Q
    |||||    
T  12427518 atctc 12427514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 16803970 - 16804074
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||| |||||| ||| ||||||||||||||||||||||||||||    
T  16803970 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctttc 16804069  T
Q  205 atctc 209  Q
    |||||    
T  16804070 atctc 16804074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 16843252 - 16843356
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||  | |||||||| ||| |||||| ||| ||||||||||||||||||||||||||||    
T  16843252 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcacaaccatactttctctttc 16843351  T
Q  205 atctc 209  Q
    |||||    
T  16843352 atctc 16843356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 14285678 - 14285782
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||| |||||  |||||||||||||||||||||||||||||||| ||||  ||||| ||||||||||||||||||||||| |  |||||||||||||||    
T  14285678 aaaatattacacaaacaccctttaatcatacaccctattgtacaccctatatattaaagatattttggtaaattcatctcagagtcatactttctctttc 14285777  T
Q  205 atctc 209  Q
    |||||    
T  14285778 atctc 14285782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 109 - 209
Target Start/End: Complemental strand, 34895835 - 34895735
Alignment:
Q  109 tgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttcatct 208  Q
    ||||||||||||||| |||||||| |||||||||||||||| | |||||||| ||| || |||||||||||||||||||| |||||||| ||||||||||    
T  34895835 tgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcacaatcatactttatctttcatct 34895736  T
Q  209 c 209  Q
    |    
T  34895735 c 34895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 127 - 209
Target Start/End: Complemental strand, 4452026 - 4451944
Alignment:
Q  127 taatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttcatctc 209  Q
    |||||||||| | ||||||||||  ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  4452026 taatcatacatcttattgtacaccatatgcattagggatattttggtaaattcatctcacaaccatactttctctttcatctc 4451944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 103 - 202
Target Start/End: Complemental strand, 43490501 - 43490402
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||||| || |||| || ||||||||||||||| |||| |||||||||||||| ||||||||| ||||| ||||| ||||    
T  43490501 gaaaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctcataaccacactttatctt 43490402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 1750416 - 1750513
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || ||||||| ||||||||| ||||| |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  1750416 aaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 1750513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 103 - 188
Target Start/End: Complemental strand, 6518568 - 6518484
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaa 188  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||| | |||||||| ||| |||||||||| ||||||||||||    
T  6518568 gaaaaatgttacatgaacacc-tttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcacaa 6518484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 12302351 - 12302254
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| |  ||||||| ||||||||| ||||| |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  12302351 aaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 12302254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 19047159 - 19047256
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || ||||  | ||||||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  19047159 aaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 19047256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 34817874 - 34817777
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| ||| |||||  ||||||||| | ||||| || | | |||||||||||||||||||||||||| ||||||||||    
T  34817874 aaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctcacaaccacactttctctt 34817777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 4764824 - 4764727
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||| |||||| |||| || ||||||||||||||||| | ||| ||||   |||||||||||||||||||||||||||| ||||| ||||    
T  4764824 aaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcacaaccacactttatctt 4764727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 30838634 - 30838731
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| |  |||| | |||||||||| | ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  30838634 aaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 30838731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 103 - 199
Target Start/End: Complemental strand, 8896683 - 8896587
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttct 199  Q
    |||||||||||||||||||||||||| ||| |||  | ||||||||| |||| || || | ||||||||||||||||||||||||| || |||||||    
T  8896683 gaaaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcacaatcacactttct 8896587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 209
Target Start/End: Complemental strand, 12531744 - 12531657
Alignment:
Q  121 accctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttcatctc 209  Q
    ||||||||||||||||||| |||||||||   | |||||| ||   |||||||||||||||||||||||||||||||||||||||||||    
T  12531744 accctttaatcatacacccaattgtacacctcaagcattatgggc-ttttggtaaattcatctcacaaccatactttctctttcatctc 12531657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 13780833 - 13780736
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||| |||||  |||| ||| |||||  ||||||||| | || ||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  13780833 aaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctcacaaccacactttctctt 13780736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 16096749 - 16096846
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || ||||||| ||| ||||| | ||| |||| |||||||||||| | || |||||||||||| ||||| ||||    
T  16096749 aaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcacaaccacactttatctt 16096846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 191
Target Start/End: Original strand, 7070416 - 7070504
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaacca 191  Q
    |||||||||||||||||||||||||| ||||||| || ||||||  ||| ||  |||  ||| |||||| ||||||||||| |||||||    
T  7070416 gaaaaatgttacatgaacaccctttattcatacatcccattgtaacctccatttattggggacattttgataaattcatcttacaacca 7070504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 199
Target Start/End: Original strand, 42026769 - 42026865
Alignment:
Q  105 aaaatgttacatgaacaccc--tttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttct 199  Q
    ||||||||||||||||||||  |||| |||||||  | ||||||||  |   |||||| ||||||||||| |||||||||||||||| | |||||||    
T  42026769 aaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttggcaaattcatctcacaactacactttct 42026865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 43335861 - 43335764
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||| ||||||| | |||| || ||||||  ||||||||  | ||| |||| |||||||||||||| ||||||||||||| | ||||| ||||    
T  43335861 aaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcacaactacactttatctt 43335764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 103 - 182
Target Start/End: Original strand, 33229301 - 33229381
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaat-catacaccctattgtacactctatgcattaaggatattttggtaaattcatc 182  Q
    |||||||| |||||||||||||||| || | ||||||  ||||||||| | ||| |||| |||||||||||||| ||||||    
T  33229301 gaaaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatc 33229381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 17208076 - 17208180
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||| ||||||||||||||||||||||  |||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17208076 aaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcacaaccatactttctctttc 17208175  T
Q  205 atctc 209  Q
    |||||    
T  17208176 atctc 17208180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 32473492 - 32473388
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||||||||||||||||||||||||||| ||||||||||   |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  32473492 aaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcacaaccatactttctctttc 32473393  T
Q  205 atctc 209  Q
    |||||    
T  32473392 atctc 32473388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 30622816 - 30622713
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    ||||||||||||||||| ||||||||||||||||||||||||  | | |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  30622816 aaaatgttacatgaacatcctttaatcatacaccctattgtaagccc-atgcattaaggatattttggtaaatttatctcacaaccatactttctctttc 30622718  T
Q  205 atctc 209  Q
    |||||    
T  30622717 atctc 30622713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 2614747 - 2614650
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || |||| || ||||||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  2614747 aaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 2614650  T

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Target: chr5; HSP #5
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 22512307 - 22512404
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || ||||| | ||||||||||| ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  22512307 aaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 22512404  T

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Target: chr5; HSP #6
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 41334761 - 41334664
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| |||||||||  ||| ||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  41334761 aaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 41334664  T

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Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 7617135 - 7617232
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| |||||||| | ||| ||||| | ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  7617135 aaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcacaaccacactttatctt 7617232  T

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Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 18033984 - 18034081
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || ||||| | ||||||||| ||||| |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  18033984 aaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 18034081  T

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Target: chr5; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 103 - 202
Target Start/End: Original strand, 5256995 - 5257094
Alignment:
Q  103 gaaaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||| |||||| |||| ||||||| || ||||||||| | ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  5256995 gaaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcacaaccacactttatctt 5257094  T

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Target: chr5; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 33801471 - 33801568
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||||||||||| |||||| |  ||||||| ||||||||||| ||| |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  33801471 aaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcacaaccacactttatctt 33801568  T

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Target: chr5; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 38470581 - 38470678
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||| ||||||||||| |||||||  | ||||||||| | ||| ||||||||||||||||||||||||| |||||| || ||||| ||||    
T  38470581 aaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcacaatcacactttatctt 38470678  T

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Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 175
Target Start/End: Complemental strand, 33855141 - 33855071
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaa 175  Q
    |||||||||||||||||||||||| || ||||||| ||||||||| | ||| |||| | | ||||||||||    
T  33855141 aaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaa 33855071  T

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Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 149
Target Start/End: Complemental strand, 25915098 - 25915041
Alignment:
Q  92 atttattttaggaaaaatgttacatgaacaccctttaatcatacaccctattgtacac 149  Q
    |||||||||  |||||||||||||||||||||||||| || ||||||  |||||||||    
T  25915098 atttattttttgaaaaatgttacatgaacaccctttattcctacacctcattgtacac 25915041  T

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Target: scaffold0100 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 209
Target Start/End: Complemental strand, 35554 - 35450
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctttc 204  Q
    |||||||||||| |||||| |||||||||||||| |||||||||| | |||||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  35554 aaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcacaaccatactttctctttc 35455  T
Q  205 atctc 209  Q
    |||||    
T  35454 atctc 35450  T

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Target: scaffold0038 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 112657 - 112754
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || ||||  | ||||||||| ||||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  112657 aaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcacaaccacactttatctt 112754  T

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Target: scaffold0385 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 11253 - 11350
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||| |||||||||| ||||| |||||||||| ||||||||| | ||  |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  11253 aaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcacaaccacactttatctt 11350  T

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Target: scaffold0187 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 14286 - 14189
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| |  ||||||| ||||||||  ||||| |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  14286 aaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 14189  T

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Target: scaffold0187; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 24614 - 24517
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| |  ||||||| ||||||||  ||||| |||| ||||||||| |||| ||||||||||||||| ||||| ||||    
T  24614 aaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcacaaccacactttatctt 24517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 105 - 202
Target Start/End: Original strand, 687 - 784
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    |||||||||||||||||||||||| || ||||||  |||||||||   ||| |||| |||||||||||||| ||||||||||||||| ||||| ||||    
T  687 aaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcacaaccacactttatctt 784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 202
Target Start/End: Complemental strand, 23519 - 23422
Alignment:
Q  105 aaaatgttacatgaacaccctttaatcatacaccctattgtacactctatgcattaaggatattttggtaaattcatctcacaaccatactttctctt 202  Q
    ||||||||| |||||||||||||| || ||||| | ||||||||  | ||| ||||  ||||||||||||| ||||||| |||| || ||||| ||||    
T  23519 aaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatcttacaatcacactttatctt 23422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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