View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20581_high_5 (Length: 272)
Name: NF20581_high_5
Description: NF20581
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20581_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 3 - 254
Target Start/End: Complemental strand, 13271383 - 13271133
Alignment:
| Q |
3 |
ttttctagtctacaacaaaaacctctttcaagttttacatcacttctctttagctccaaatcaaaaccttctttctttcccatccatccatgtctcacaa |
102 |
Q |
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| T |
13271383 |
ttttctagtctacaacaaaaacctctttcaagttttacatcacttctctttagctccaaatcaaaaccttctttctttcccatccatccatgtctcacaa |
13271284 |
T |
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| Q |
103 |
gaacaacacaacctagatagtgttaaaatgagtttcaaaggatgatgaatggaataaggcaaaagatcaagaacaaaatgtgttgagagagaaatagtgc |
202 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13271283 |
gaacaacacaacctagatagtgttaaaatgagtttcaaaggatgatgaat-gaataaggcaaaagatcaagaacaaaatgtgttgagagagaaatagtgc |
13271185 |
T |
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| Q |
203 |
taactaagagagagcttatttcatgcttgcttcacgcaaacacctaactatt |
254 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
13271184 |
taactaagagagagcttatttcatgcttgcttcacgcaaacacctaactatt |
13271133 |
T |
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