View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20582_low_29 (Length: 258)

Name: NF20582_low_29
Description: NF20582
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20582_low_29
NF20582_low_29
[»] chr1 (25 HSPs)
chr1 (87-155)||(11593911-11593978)
chr1 (159-240)||(11593788-11593859)
chr1 (12-44)||(990188-990220)
chr1 (12-44)||(3679725-3679757)
chr1 (12-44)||(4323930-4323962)
chr1 (12-44)||(7001763-7001795)
chr1 (12-44)||(12361112-12361144)
chr1 (12-44)||(14007588-14007620)
chr1 (12-44)||(15335161-15335193)
chr1 (12-44)||(18473373-18473405)
chr1 (12-44)||(26142521-26142553)
chr1 (12-44)||(31258441-31258473)
chr1 (12-44)||(32626760-32626792)
chr1 (12-44)||(41358530-41358562)
chr1 (12-44)||(41881195-41881227)
chr1 (12-44)||(1159707-1159739)
chr1 (12-44)||(2733285-2733317)
chr1 (12-44)||(13260087-13260119)
chr1 (12-44)||(13770590-13770622)
chr1 (12-44)||(19622757-19622789)
chr1 (12-44)||(22919783-22919815)
chr1 (12-44)||(26191459-26191491)
chr1 (12-44)||(32454157-32454189)
chr1 (12-44)||(32728916-32728948)
chr1 (12-44)||(48955932-48955964)
[»] scaffold0370 (1 HSPs)
scaffold0370 (12-44)||(156-188)
[»] scaffold0123 (1 HSPs)
scaffold0123 (12-44)||(17910-17942)
[»] scaffold0021 (1 HSPs)
scaffold0021 (12-44)||(12284-12316)
[»] scaffold0016 (1 HSPs)
scaffold0016 (12-44)||(10257-10289)
[»] chr8 (25 HSPs)
chr8 (12-44)||(1525911-1525943)
chr8 (12-44)||(4375791-4375823)
chr8 (12-44)||(6146815-6146847)
chr8 (12-44)||(14495267-14495299)
chr8 (12-44)||(19494220-19494252)
chr8 (12-44)||(21509796-21509828)
chr8 (12-44)||(22917794-22917826)
chr8 (12-44)||(24954878-24954910)
chr8 (12-44)||(33636424-33636456)
chr8 (12-44)||(38930403-38930435)
chr8 (12-44)||(40493054-40493086)
chr8 (12-43)||(4017005-4017036)
chr8 (12-44)||(1163013-1163045)
chr8 (12-44)||(1408221-1408253)
chr8 (12-44)||(6146616-6146648)
chr8 (12-44)||(8094581-8094613)
chr8 (12-44)||(10776365-10776397)
chr8 (12-44)||(14488816-14488848)
chr8 (12-40)||(16789240-16789268)
chr8 (12-44)||(22650568-22650600)
chr8 (12-44)||(24187668-24187700)
chr8 (12-44)||(25131210-25131242)
chr8 (12-44)||(28398906-28398938)
chr8 (12-44)||(30337023-30337055)
chr8 (12-44)||(32040240-32040272)
[»] chr7 (24 HSPs)
chr7 (12-44)||(1007096-1007128)
chr7 (12-44)||(1559573-1559605)
chr7 (12-44)||(6108564-6108596)
chr7 (12-44)||(7432053-7432085)
chr7 (12-44)||(28911679-28911711)
chr7 (12-44)||(30709425-30709457)
chr7 (12-44)||(37372772-37372804)
chr7 (12-44)||(39719455-39719487)
chr7 (12-44)||(45021597-45021629)
chr7 (14-44)||(21554622-21554652)
chr7 (12-44)||(488814-488846)
chr7 (12-44)||(5308554-5308586)
chr7 (12-44)||(12894269-12894301)
chr7 (12-44)||(19561249-19561281)
chr7 (12-44)||(19783916-19783948)
chr7 (12-44)||(21223508-21223540)
chr7 (12-44)||(22871162-22871194)
chr7 (12-44)||(31732318-31732350)
chr7 (12-44)||(35015086-35015118)
chr7 (12-44)||(39833005-39833037)
chr7 (12-44)||(44344658-44344690)
chr7 (12-44)||(44403119-44403151)
chr7 (12-44)||(45073509-45073541)
chr7 (12-44)||(46304249-46304281)
[»] chr6 (19 HSPs)
chr6 (12-44)||(494629-494661)
chr6 (12-44)||(8680877-8680909)
chr6 (12-44)||(11129302-11129334)
chr6 (12-44)||(14655637-14655669)
chr6 (12-44)||(17321421-17321453)
chr6 (12-44)||(17321554-17321586)
chr6 (12-44)||(19296273-19296305)
chr6 (12-44)||(24273939-24273971)
chr6 (12-44)||(30928912-30928944)
chr6 (12-44)||(31398408-31398440)
chr6 (12-44)||(33801610-33801642)
chr6 (15-44)||(31166971-31167000)
chr6 (12-44)||(543590-543622)
chr6 (12-44)||(2616102-2616134)
chr6 (12-44)||(5286687-5286719)
chr6 (12-44)||(15076071-15076103)
chr6 (12-44)||(15116773-15116805)
chr6 (12-44)||(24692848-24692880)
chr6 (12-44)||(34582631-34582663)
[»] chr5 (25 HSPs)
chr5 (12-44)||(294059-294091)
chr5 (12-44)||(2217724-2217756)
chr5 (12-44)||(4203554-4203586)
chr5 (12-44)||(6118361-6118393)
chr5 (12-44)||(15635477-15635509)
chr5 (12-44)||(18633827-18633859)
chr5 (12-44)||(23382176-23382208)
chr5 (12-44)||(25779028-25779060)
chr5 (12-44)||(29151618-29151650)
chr5 (12-44)||(30888262-30888294)
chr5 (12-44)||(35166026-35166058)
chr5 (12-44)||(38962960-38962992)
chr5 (12-44)||(42207342-42207374)
chr5 (13-43)||(22551184-22551214)
chr5 (14-44)||(27850245-27850275)
chr5 (15-44)||(29172625-29172654)
chr5 (12-44)||(5614396-5614428)
chr5 (12-44)||(16616463-16616495)
chr5 (12-44)||(28550927-28550959)
chr5 (12-44)||(29692959-29692991)
chr5 (12-44)||(31037497-31037529)
chr5 (12-44)||(35167032-35167064)
chr5 (12-44)||(36577821-36577853)
chr5 (12-44)||(37090608-37090640)
chr5 (12-44)||(38496521-38496553)
[»] chr4 (23 HSPs)
chr4 (12-44)||(9446191-9446223)
chr4 (12-44)||(13479371-13479403)
chr4 (12-44)||(27427944-27427976)
chr4 (12-44)||(36702101-36702133)
chr4 (12-44)||(50714432-50714464)
chr4 (12-44)||(55482337-55482369)
chr4 (12-42)||(13064260-13064290)
chr4 (12-44)||(4279201-4279233)
chr4 (12-44)||(5063105-5063137)
chr4 (12-44)||(6827740-6827772)
chr4 (12-44)||(18135982-18136014)
chr4 (12-44)||(24474829-24474861)
chr4 (12-44)||(27008274-27008306)
chr4 (12-44)||(29463780-29463812)
chr4 (12-44)||(34355065-34355097)
chr4 (12-44)||(34362012-34362044)
chr4 (12-44)||(35415401-35415433)
chr4 (12-44)||(38054646-38054678)
chr4 (12-44)||(41346085-41346117)
chr4 (12-44)||(41620122-41620154)
chr4 (12-44)||(41920951-41920983)
chr4 (12-44)||(49123190-49123222)
chr4 (12-44)||(51708894-51708926)
[»] chr3 (29 HSPs)
chr3 (12-44)||(275543-275575)
chr3 (12-44)||(10977079-10977111)
chr3 (12-44)||(13584105-13584137)
chr3 (12-44)||(19656770-19656802)
chr3 (12-44)||(20907324-20907356)
chr3 (12-44)||(22156031-22156063)
chr3 (12-44)||(29955400-29955432)
chr3 (12-44)||(30004554-30004586)
chr3 (12-44)||(37506968-37507000)
chr3 (12-44)||(39288766-39288798)
chr3 (12-44)||(39436975-39437007)
chr3 (12-44)||(40169520-40169552)
chr3 (12-44)||(45320847-45320879)
chr3 (15-44)||(20757500-20757529)
chr3 (15-44)||(39072083-39072112)
chr3 (12-44)||(3151978-3152010)
chr3 (12-44)||(3830232-3830264)
chr3 (12-44)||(4950234-4950266)
chr3 (12-44)||(8510316-8510348)
chr3 (12-44)||(10778599-10778631)
chr3 (12-44)||(12673872-12673904)
chr3 (12-44)||(16123242-16123274)
chr3 (12-44)||(21159683-21159715)
chr3 (12-44)||(26799990-26800022)
chr3 (12-44)||(28427475-28427507)
chr3 (12-44)||(45161213-45161245)
chr3 (12-44)||(46186637-46186669)
chr3 (12-44)||(47901901-47901933)
chr3 (12-44)||(51834809-51834841)
[»] chr2 (30 HSPs)
chr2 (12-44)||(14392997-14393029)
chr2 (12-44)||(19183884-19183916)
chr2 (12-44)||(23989937-23989969)
chr2 (12-44)||(26814095-26814127)
chr2 (12-44)||(38980120-38980152)
chr2 (12-44)||(40302077-40302109)
chr2 (12-44)||(41693869-41693901)
chr2 (12-44)||(41791119-41791151)
chr2 (12-44)||(43789058-43789090)
chr2 (12-44)||(44985722-44985754)
chr2 (12-43)||(38731929-38731960)
chr2 (15-44)||(17912550-17912579)
chr2 (12-44)||(3838130-3838162)
chr2 (12-44)||(5790765-5790797)
chr2 (12-44)||(7814473-7814505)
chr2 (12-44)||(7814606-7814638)
chr2 (12-44)||(8046430-8046462)
chr2 (12-44)||(10665084-10665116)
chr2 (12-44)||(12835427-12835459)
chr2 (12-44)||(16899996-16900028)
chr2 (12-44)||(16993387-16993419)
chr2 (12-44)||(22881837-22881869)
chr2 (12-44)||(24483632-24483664)
chr2 (12-44)||(26238912-26238944)
chr2 (12-44)||(31225817-31225849)
chr2 (12-44)||(37271969-37272001)
chr2 (12-44)||(40786561-40786593)
chr2 (12-44)||(43592146-43592178)
chr2 (12-44)||(43597368-43597400)
chr2 (12-44)||(43710480-43710512)
[»] scaffold0811 (1 HSPs)
scaffold0811 (12-44)||(1510-1542)
[»] scaffold0712 (1 HSPs)
scaffold0712 (12-44)||(5311-5343)
[»] scaffold0709 (1 HSPs)
scaffold0709 (12-44)||(5331-5363)
[»] scaffold0373 (1 HSPs)
scaffold0373 (12-44)||(8649-8681)
[»] scaffold0210 (1 HSPs)
scaffold0210 (12-44)||(14797-14829)
[»] scaffold0179 (1 HSPs)
scaffold0179 (12-44)||(3159-3191)
[»] scaffold0159 (1 HSPs)
scaffold0159 (12-44)||(35138-35170)
[»] scaffold0060 (1 HSPs)
scaffold0060 (12-44)||(8432-8464)


Alignment Details
Target: chr1 (Bit Score: 61; Significance: 3e-26; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 87 - 155
Target Start/End: Complemental strand, 11593978 - 11593911
Alignment:
Q  87 aaatataataaaatcaccattctcctttttaatttatcaaatttatatgaaatagttaaatttcattgt 155  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  11593978 aaatataataaaatcaccattctc-tttttaatttatcaaatttatatgaaatagttaaatttcattgt 11593911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 159 - 240
Target Start/End: Complemental strand, 11593859 - 11593788
Alignment:
Q  159 tcaacctttgtataattgccaaagcaccatcccatcccatcccaaccttatcttcaagacatttccaaattccacccatctt 240  Q
    ||||||||||||||||||||||||||||||||||          ||||||||||||||||||||||||||||||||||||||    
T  11593859 tcaacctttgtataattgccaaagcaccatccca----------accttatcttcaagacatttccaaattccacccatctt 11593788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 990220 - 990188
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  990220 atcatcacaaaagtggggtcagggactattttc 990188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 3679757 - 3679725
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  3679757 atcatcacaaaagtggggtcagggactattttc 3679725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 4323962 - 4323930
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  4323962 atcatcacaaaagtggggtcagggactattttc 4323930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 7001763 - 7001795
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  7001763 atcatcacaaaagtggggtcagggactattttc 7001795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 12361144 - 12361112
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  12361144 atcatcacaaaagtggggtcagggactattttc 12361112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 14007620 - 14007588
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  14007620 atcatcacaaaagtggggtcagggactattttc 14007588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 15335161 - 15335193
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  15335161 atcatcacaaaagtggggtcagggactattttc 15335193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 18473405 - 18473373
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  18473405 atcatcacaaaagtggggtcagggactattttc 18473373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 26142553 - 26142521
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  26142553 atcatcacaaaagtggggtcagggactattttc 26142521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 31258473 - 31258441
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  31258473 atcatcacaaaagtggggtcagggactattttc 31258441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 32626760 - 32626792
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  32626760 atcatcacaaaagtggggtcagggactattttc 32626792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 41358530 - 41358562
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  41358530 atcatcacaaaagtggggtcagggactattttc 41358562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 41881227 - 41881195
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  41881227 atcatcacaaaagtggggtcagggactattttc 41881195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 1159707 - 1159739
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||| |||||||||||||||||||||||||    
T  1159707 atcatcataaaagtggggtcagggactattttc 1159739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 2733317 - 2733285
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  2733317 atcatcacaaaagtggggtcagagactattttc 2733285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 13260119 - 13260087
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||| |||||||||||    
T  13260119 atcatcacaaaagtggggtcaaggactattttc 13260087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 13770622 - 13770590
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||| ||||||||||||||||||||    
T  13770622 atcatcacaaaaatggggtcagggactattttc 13770590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 19622789 - 19622757
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||| |||||||||||    
T  19622789 atcatcacaaaagtggggtcatggactattttc 19622757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 22919815 - 22919783
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||| ||||||||||||||||||||    
T  22919815 atcatcacaaaaatggggtcagggactattttc 22919783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 26191491 - 26191459
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||| ||||||||||||||||||||    
T  26191491 atcatcacaaaaatggggtcagggactattttc 26191459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 32454157 - 32454189
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||| |||||||||||||||||||||||||    
T  32454157 atcatcataaaagtggggtcagggactattttc 32454189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 32728916 - 32728948
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||| |||||||||||    
T  32728916 atcatcacaaaagtggggtcatggactattttc 32728948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 48955932 - 48955964
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  48955932 atcatcacaaaagtggggtcagagactattttc 48955964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0370 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 156 - 188
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  156 atcatcacaaaagtggggtcagggactattttc 188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 17910 - 17942
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  17910 atcatcacaaaagtggggtcagggactattttc 17942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 12316 - 12284
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  12316 atcatcacaaaagtggggtcagggactattttc 12284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 10289 - 10257
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  10289 atcatcacaaaagtggggtcagggactattttc 10257  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 1525943 - 1525911
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  1525943 atcatcacaaaagtggggtcagggactattttc 1525911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 4375823 - 4375791
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  4375823 atcatcacaaaagtggggtcagggactattttc 4375791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 6146815 - 6146847
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  6146815 atcatcacaaaagtggggtcagggactattttc 6146847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 14495267 - 14495299
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  14495267 atcatcacaaaagtggggtcagggactattttc 14495299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 19494252 - 19494220
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  19494252 atcatcacaaaagtggggtcagggactattttc 19494220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 21509828 - 21509796
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  21509828 atcatcacaaaagtggggtcagggactattttc 21509796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 22917794 - 22917826
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  22917794 atcatcacaaaagtggggtcagggactattttc 22917826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 24954878 - 24954910
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  24954878 atcatcacaaaagtggggtcagggactattttc 24954910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 33636456 - 33636424
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  33636456 atcatcacaaaagtggggtcagggactattttc 33636424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 38930435 - 38930403
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  38930435 atcatcacaaaagtggggtcagggactattttc 38930403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 40493086 - 40493054
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  40493086 atcatcacaaaagtggggtcagggactattttc 40493054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 43
Target Start/End: Complemental strand, 4017036 - 4017005
Alignment:
Q  12 atcatcacaaaagtggggtcagggactatttt 43  Q
    ||||||||||||||||||||||||||||||||    
T  4017036 atcatcacaaaagtggggtcagggactatttt 4017005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 1163045 - 1163013
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  1163045 atcatcacaaaagtggggtcagagactattttc 1163013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 1408221 - 1408253
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  1408221 atcatcacaaaagtggggtcagtgactattttc 1408253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 6146648 - 6146616
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||||| |||||||||    
T  6146648 atcatcacaaaagtggggtcaggaactattttc 6146616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 8094613 - 8094581
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||| ||||||||||||||||||||    
T  8094613 atcatcacaaaaatggggtcagggactattttc 8094581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 10776365 - 10776397
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||| |||||||||||    
T  10776365 atcatcacaaaagtggggtcaaggactattttc 10776397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 14488848 - 14488816
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||| ||||||||||||||||||||    
T  14488848 atcatcacaaaaatggggtcagggactattttc 14488816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Original strand, 16789240 - 16789268
Alignment:
Q  12 atcatcacaaaagtggggtcagggactat 40  Q
    |||||||||||||||||||||||||||||    
T  16789240 atcatcacaaaagtggggtcagggactat 16789268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 22650600 - 22650568
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||| ||||||||||||||    
T  22650600 atcatcacaaaagtggggccagggactattttc 22650568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 24187700 - 24187668
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  24187700 atcatcacaaaagtggggtcagagactattttc 24187668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 25131242 - 25131210
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||| |||||||||||||||||||||||||    
T  25131242 atcatcataaaagtggggtcagggactattttc 25131210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 28398906 - 28398938
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||| |||||||||||||    
T  28398906 atcatcacaaaagtggggttagggactattttc 28398938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 30337055 - 30337023
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||| ||||||||||||||||||||    
T  30337055 atcatcacaaaaatggggtcagggactattttc 30337023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 32040240 - 32040272
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  32040240 atcatcacaaaagtggggtcagagactattttc 32040272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 1007096 - 1007128
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  1007096 atcatcacaaaagtggggtcagggactattttc 1007128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 1559573 - 1559605
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  1559573 atcatcacaaaagtggggtcagggactattttc 1559605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 6108564 - 6108596
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  6108564 atcatcacaaaagtggggtcagggactattttc 6108596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 7432085 - 7432053
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  7432085 atcatcacaaaagtggggtcagggactattttc 7432053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 28911711 - 28911679
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  28911711 atcatcacaaaagtggggtcagggactattttc 28911679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 30709457 - 30709425
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  30709457 atcatcacaaaagtggggtcagggactattttc 30709425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 37372772 - 37372804
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  37372772 atcatcacaaaagtggggtcagggactattttc 37372804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 39719487 - 39719455
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  39719487 atcatcacaaaagtggggtcagggactattttc 39719455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 45021629 - 45021597
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  45021629 atcatcacaaaagtggggtcagggactattttc 45021597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 21554622 - 21554652
Alignment:
Q  14 catcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||    
T  21554622 catcacaaaagtggggtcagggactattttc 21554652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 488846 - 488814
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  488846 atcatcacaaaagtggggtcagagactattttc 488814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 5308554 - 5308586
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  5308554 atcatcacaaaagtggggtcagagactattttc 5308586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 12894269 - 12894301
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||| |||||||||||    
T  12894269 atcatcacaaaagtggggtcatggactattttc 12894301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 19561281 - 19561249
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||| ||||||||||||||||    
T  19561281 atcatcacaaaagtggtgtcagggactattttc 19561249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 19783948 - 19783916
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||| |||||||||||||||    
T  19783948 atcatcacaaaagtgggatcagggactattttc 19783916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 21223540 - 21223508
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  21223540 atcatcacaaaagtggggtcagagactattttc 21223508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 22871194 - 22871162
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||| ||||||||    
T  22871194 atcatcacaaaagtggggtcagggtctattttc 22871162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 31732318 - 31732350
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||| ||||||||||||||||||||    
T  31732318 atcatcacaaaaatggggtcagggactattttc 31732350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 35015086 - 35015118
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||||| |||||||||    
T  35015086 atcatcacaaaagtggggtcaggaactattttc 35015118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 39833037 - 39833005
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||||| |||||||||    
T  39833037 atcatcacaaaagtggggtcaggaactattttc 39833005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 44344658 - 44344690
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  44344658 atcatcacaaaagtggggtcagtgactattttc 44344690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 44403119 - 44403151
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  44403119 atcatcacaaaagtggggtcagagactattttc 44403151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 45073509 - 45073541
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  45073509 atcatcacaaaagtggggtcagagactattttc 45073541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 46304249 - 46304281
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  46304249 atcatcacaaaagtggggtcagagactattttc 46304281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 33; Significance: 0.000000001; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 494629 - 494661
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  494629 atcatcacaaaagtggggtcagggactattttc 494661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 8680909 - 8680877
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  8680909 atcatcacaaaagtggggtcagggactattttc 8680877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 11129334 - 11129302
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  11129334 atcatcacaaaagtggggtcagggactattttc 11129302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 14655637 - 14655669
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  14655637 atcatcacaaaagtggggtcagggactattttc 14655669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 17321421 - 17321453
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  17321421 atcatcacaaaagtggggtcagggactattttc 17321453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 17321554 - 17321586
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  17321554 atcatcacaaaagtggggtcagggactattttc 17321586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 19296273 - 19296305
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  19296273 atcatcacaaaagtggggtcagggactattttc 19296305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 24273971 - 24273939
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  24273971 atcatcacaaaagtggggtcagggactattttc 24273939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 30928912 - 30928944
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  30928912 atcatcacaaaagtggggtcagggactattttc 30928944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 31398408 - 31398440
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  31398408 atcatcacaaaagtggggtcagggactattttc 31398440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 33801610 - 33801642
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  33801610 atcatcacaaaagtggggtcagggactattttc 33801642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 31167000 - 31166971
Alignment:
Q  15 atcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||||||||||||    
T  31167000 atcacaaaagtggggtcagggactattttc 31166971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 543590 - 543622
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||| |||||||||||    
T  543590 atcatcacaaaagtggggtcatggactattttc 543622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 2616102 - 2616134
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||| |||||||||||||||||    
T  2616102 atcatcacaaaagtgtggtcagggactattttc 2616134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 5286719 - 5286687
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||| ||||||||||||||    
T  5286719 atcatcacaaaagtggggccagggactattttc 5286687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 15076071 - 15076103
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||| |||||||||||||||||||||||||    
T  15076071 atcatcataaaagtggggtcagggactattttc 15076103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 15116805 - 15116773
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||| ||||||||||||||    
T  15116805 atcatcacaaaagtggggacagggactattttc 15116773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 24692848 - 24692880
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||| |||||||||||||||||    
T  24692848 atcatcacaaaagtgaggtcagggactattttc 24692880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 34582663 - 34582631
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||| |||||||||||||||    
T  34582663 atcatcacaaaagtgggatcagggactattttc 34582631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000001; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 294059 - 294091
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  294059 atcatcacaaaagtggggtcagggactattttc 294091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 2217724 - 2217756
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  2217724 atcatcacaaaagtggggtcagggactattttc 2217756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 4203586 - 4203554
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  4203586 atcatcacaaaagtggggtcagggactattttc 4203554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 6118361 - 6118393
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  6118361 atcatcacaaaagtggggtcagggactattttc 6118393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 15635509 - 15635477
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  15635509 atcatcacaaaagtggggtcagggactattttc 15635477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 18633827 - 18633859
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  18633827 atcatcacaaaagtggggtcagggactattttc 18633859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 23382176 - 23382208
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  23382176 atcatcacaaaagtggggtcagggactattttc 23382208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 25779028 - 25779060
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  25779028 atcatcacaaaagtggggtcagggactattttc 25779060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 29151650 - 29151618
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  29151650 atcatcacaaaagtggggtcagggactattttc 29151618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 30888294 - 30888262
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  30888294 atcatcacaaaagtggggtcagggactattttc 30888262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 35166026 - 35166058
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  35166026 atcatcacaaaagtggggtcagggactattttc 35166058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 38962960 - 38962992
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  38962960 atcatcacaaaagtggggtcagggactattttc 38962992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 42207374 - 42207342
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  42207374 atcatcacaaaagtggggtcagggactattttc 42207342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 43
Target Start/End: Original strand, 22551184 - 22551214
Alignment:
Q  13 tcatcacaaaagtggggtcagggactatttt 43  Q
    |||||||||||||||||||||||||||||||    
T  22551184 tcatcacaaaagtggggtcagggactatttt 22551214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 44
Target Start/End: Original strand, 27850245 - 27850275
Alignment:
Q  14 catcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||    
T  27850245 catcacaaaagtggggtcagggactattttc 27850275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 29172654 - 29172625
Alignment:
Q  15 atcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||||||||||||    
T  29172654 atcacaaaagtggggtcagggactattttc 29172625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 5614396 - 5614428
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||| ||||||||||||||||    
T  5614396 atcatcacaaaagtggtgtcagggactattttc 5614428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 16616495 - 16616463
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||| |||||||||||    
T  16616495 atcatcacaaaagtggggtcatggactattttc 16616463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 28550959 - 28550927
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||| |||||||||||||    
T  28550959 atcatcacaaaagtggggttagggactattttc 28550927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 29692959 - 29692991
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||| |||||||||||||||||||||||||    
T  29692959 atcatcataaaagtggggtcagggactattttc 29692991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 31037529 - 31037497
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  31037529 atcatcacaaaagtggggtcagagactattttc 31037497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 35167032 - 35167064
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  35167032 atcatcacaaaagtggggtcagagactattttc 35167064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 36577853 - 36577821
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||| |||||||||||||||    
T  36577853 atcatcacaaaagtgggatcagggactattttc 36577821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 37090608 - 37090640
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  37090608 atcatcacaaaagtggggtcagagactattttc 37090640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 38496553 - 38496521
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  38496553 atcatcacaaaagtggggtcagagactattttc 38496521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 33; Significance: 0.000000001; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 9446191 - 9446223
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  9446191 atcatcacaaaagtggggtcagggactattttc 9446223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 13479403 - 13479371
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  13479403 atcatcacaaaagtggggtcagggactattttc 13479371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 27427976 - 27427944
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  27427976 atcatcacaaaagtggggtcagggactattttc 27427944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 36702133 - 36702101
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  36702133 atcatcacaaaagtggggtcagggactattttc 36702101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 50714432 - 50714464
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  50714432 atcatcacaaaagtggggtcagggactattttc 50714464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 55482337 - 55482369
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  55482337 atcatcacaaaagtggggtcagggactattttc 55482369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 42
Target Start/End: Complemental strand, 13064290 - 13064260
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattt 42  Q
    |||||||||||||||||||||||||||||||    
T  13064290 atcatcacaaaagtggggtcagggactattt 13064260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 4279201 - 4279233
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||||| |||||||||    
T  4279201 atcatcacaaaagtggggtcaggtactattttc 4279233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 5063137 - 5063105
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||| |||||||||||    
T  5063137 atcatcacaaaagtggggtcaaggactattttc 5063105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 6827740 - 6827772
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||| |||||||||||||||    
T  6827740 atcatcacaaaagtgggatcagggactattttc 6827772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 18135982 - 18136014
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  18135982 atcatcacaaaagtggggtcagtgactattttc 18136014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 24474829 - 24474861
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||| |||||||||||||||||||||||||    
T  24474829 atcatcagaaaagtggggtcagggactattttc 24474861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 27008274 - 27008306
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  27008274 atcatcacaaaagtggggtcagagactattttc 27008306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 29463780 - 29463812
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||| ||||||||||||||||||||    
T  29463780 atcatcacaaaaatggggtcagggactattttc 29463812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 34355097 - 34355065
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||| ||||||||||||||    
T  34355097 atcatcacaaaagtggggccagggactattttc 34355065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 34362012 - 34362044
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||| |||||||||||    
T  34362012 atcatcacaaaagtggggtcaaggactattttc 34362044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 35415433 - 35415401
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||| ||||||||||||||||    
T  35415433 atcatcacaaaagtggagtcagggactattttc 35415401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 38054678 - 38054646
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||| |||||||||||||||    
T  38054678 atcatcacaaaagtgggatcagggactattttc 38054646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 41346085 - 41346117
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||| ||||||||||||||||||||    
T  41346085 atcatcacaaaaatggggtcagggactattttc 41346117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 41620122 - 41620154
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||| ||||||||||||||||    
T  41620122 atcatcacaaaagtggagtcagggactattttc 41620154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 41920951 - 41920983
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||| ||||||||||||||||||    
T  41920951 atcatcacaaaagtagggtcagggactattttc 41920983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 49123190 - 49123222
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  49123190 atcatcacaaaagtggggtcagtgactattttc 49123222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 51708894 - 51708926
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||| |||||||||||||||    
T  51708894 atcatcacaaaagtgggatcagggactattttc 51708926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 33; Significance: 0.000000001; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 275575 - 275543
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  275575 atcatcacaaaagtggggtcagggactattttc 275543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 10977111 - 10977079
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  10977111 atcatcacaaaagtggggtcagggactattttc 10977079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 13584137 - 13584105
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  13584137 atcatcacaaaagtggggtcagggactattttc 13584105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 19656770 - 19656802
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  19656770 atcatcacaaaagtggggtcagggactattttc 19656802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 20907324 - 20907356
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  20907324 atcatcacaaaagtggggtcagggactattttc 20907356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 22156063 - 22156031
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  22156063 atcatcacaaaagtggggtcagggactattttc 22156031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 29955432 - 29955400
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  29955432 atcatcacaaaagtggggtcagggactattttc 29955400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 30004586 - 30004554
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  30004586 atcatcacaaaagtggggtcagggactattttc 30004554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 37507000 - 37506968
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  37507000 atcatcacaaaagtggggtcagggactattttc 37506968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 39288766 - 39288798
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  39288766 atcatcacaaaagtggggtcagggactattttc 39288798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 39436975 - 39437007
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  39436975 atcatcacaaaagtggggtcagggactattttc 39437007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 40169520 - 40169552
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  40169520 atcatcacaaaagtggggtcagggactattttc 40169552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 45320847 - 45320879
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  45320847 atcatcacaaaagtggggtcagggactattttc 45320879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 20757529 - 20757500
Alignment:
Q  15 atcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||||||||||||    
T  20757529 atcacaaaagtggggtcagggactattttc 20757500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 44
Target Start/End: Original strand, 39072083 - 39072112
Alignment:
Q  15 atcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||||||||||||    
T  39072083 atcacaaaagtggggtcagggactattttc 39072112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 3151978 - 3152010
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  3151978 atcatcacaaaagtggggtcagagactattttc 3152010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 3830264 - 3830232
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||| ||||||||||||||||||||    
T  3830264 atcatcacaaaaatggggtcagggactattttc 3830232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 4950234 - 4950266
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||| ||||||||    
T  4950234 atcatcacaaaagtggggtcagggcctattttc 4950266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 8510348 - 8510316
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  8510348 atcatcacaaaagtggggtcagagactattttc 8510316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 10778599 - 10778631
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||| ||||||||||||||||||    
T  10778599 atcatcacaaaagtagggtcagggactattttc 10778631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 12673872 - 12673904
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  12673872 atcatcacaaaagtggggtcagagactattttc 12673904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 16123274 - 16123242
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  16123274 atcatcacaaaagtggggtcagagactattttc 16123242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 21159683 - 21159715
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||| ||||||||||||||||    
T  21159683 atcatcacaaaagtggtgtcagggactattttc 21159715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 26800022 - 26799990
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||| |||||||||||    
T  26800022 atcatcacaaaagtggggtcaaggactattttc 26799990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 28427475 - 28427507
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  28427475 atcatcacaaaagtggggtcagagactattttc 28427507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 45161245 - 45161213
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||| ||||||||||||||||    
T  45161245 atcatcacaaaagtggtgtcagggactattttc 45161213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 46186637 - 46186669
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||| ||||||||||||||||||||    
T  46186637 atcatcacaaaaatggggtcagggactattttc 46186669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 47901933 - 47901901
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||| ||||||||||||||||    
T  47901933 atcatcacaaaagtggagtcagggactattttc 47901901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 51834809 - 51834841
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||| ||||||||||||||||||||||    
T  51834809 atcatcacaatagtggggtcagggactattttc 51834841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 33; Significance: 0.000000001; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 14392997 - 14393029
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  14392997 atcatcacaaaagtggggtcagggactattttc 14393029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 19183916 - 19183884
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  19183916 atcatcacaaaagtggggtcagggactattttc 19183884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 23989969 - 23989937
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  23989969 atcatcacaaaagtggggtcagggactattttc 23989937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 26814095 - 26814127
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  26814095 atcatcacaaaagtggggtcagggactattttc 26814127  T

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Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 38980120 - 38980152
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  38980120 atcatcacaaaagtggggtcagggactattttc 38980152  T

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Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 40302109 - 40302077
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  40302109 atcatcacaaaagtggggtcagggactattttc 40302077  T

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Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 41693869 - 41693901
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  41693869 atcatcacaaaagtggggtcagggactattttc 41693901  T

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Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 41791151 - 41791119
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  41791151 atcatcacaaaagtggggtcagggactattttc 41791119  T

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Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 43789058 - 43789090
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  43789058 atcatcacaaaagtggggtcagggactattttc 43789090  T

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Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 44985754 - 44985722
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||||||||||||||    
T  44985754 atcatcacaaaagtggggtcagggactattttc 44985722  T

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Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 43
Target Start/End: Complemental strand, 38731960 - 38731929
Alignment:
Q  12 atcatcacaaaagtggggtcagggactatttt 43  Q
    ||||||||||||||||||||||||||||||||    
T  38731960 atcatcacaaaagtggggtcagggactatttt 38731929  T

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Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 15 - 44
Target Start/End: Complemental strand, 17912579 - 17912550
Alignment:
Q  15 atcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||||||||||||    
T  17912579 atcacaaaagtggggtcagggactattttc 17912550  T

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Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 3838130 - 3838162
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||| ||||||||||||||||    
T  3838130 atcatcacaaaagtggtgtcagggactattttc 3838162  T

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Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 5790765 - 5790797
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||| |||||||||||    
T  5790765 atcatcacaaaagtggggtcaaggactattttc 5790797  T

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Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 7814473 - 7814505
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  7814473 atcatcacaaaagtggggtcagagactattttc 7814505  T

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Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 7814606 - 7814638
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  7814606 atcatcacaaaagtggggtcagagactattttc 7814638  T

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Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 8046462 - 8046430
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  8046462 atcatcacaaaagtggggtcagagactattttc 8046430  T

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Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 10665116 - 10665084
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  10665116 atcatcacaaaagtggggtcagagactattttc 10665084  T

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Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 12835459 - 12835427
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||| ||||||||||||||||||    
T  12835459 atcatcacaaaagtagggtcagggactattttc 12835427  T

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Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 16900028 - 16899996
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||||||| |||||||    
T  16900028 atcatcacaaaagtggggtcagggattattttc 16899996  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 16993419 - 16993387
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||||||| |||||||    
T  16993419 atcatcacaaaagtggggtcagggattattttc 16993387  T

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Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 22881837 - 22881869
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||| |||||||||||||    
T  22881837 atcatcacaaaagtggggttagggactattttc 22881869  T

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Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 24483664 - 24483632
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||| |||||||||||||||    
T  24483664 atcatcacaaaagtgggatcagggactattttc 24483632  T

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Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 26238944 - 26238912
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||| ||||||||||||||    
T  26238944 atcatcacaaaagtggggccagggactattttc 26238912  T

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Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 31225849 - 31225817
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||| |||||||||||    
T  31225849 atcatcacaaaagtggggtcaaggactattttc 31225817  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 37271969 - 37272001
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||| |||||||||||    
T  37271969 atcatcacaaaagtggggtcatggactattttc 37272001  T

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Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 40786593 - 40786561
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||| |||||||||||    
T  40786593 atcatcacaaaagtggggtcatggactattttc 40786561  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 43592178 - 43592146
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||| ||||||||||||||||||||    
T  43592178 atcatcacaaaaatggggtcagggactattttc 43592146  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 43597368 - 43597400
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||| ||||||||||||||||||||    
T  43597368 atcatcacaaaaatggggtcagggactattttc 43597400  T

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Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 43710512 - 43710480
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||| |||||||||||||||||    
T  43710512 atcatcacaaaagtgaggtcagggactattttc 43710480  T

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Target: scaffold0811 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 1510 - 1542
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  1510 atcatcacaaaagtggggtcagagactattttc 1542  T

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Target: scaffold0712 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0712
Description:

Target: scaffold0712; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 5343 - 5311
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  5343 atcatcacaaaagtggggtcagtgactattttc 5311  T

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Target: scaffold0709 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0709
Description:

Target: scaffold0709; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 5363 - 5331
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  5363 atcatcacaaaagtggggtcagtgactattttc 5331  T

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Target: scaffold0373 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0373
Description:

Target: scaffold0373; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 8681 - 8649
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||| |||||||||||||||    
T  8681 atcatcacaaaagtgggatcagggactattttc 8649  T

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Target: scaffold0210 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 14829 - 14797
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||| ||||||||||||||    
T  14829 atcatcacaaaagtggggccagggactattttc 14797  T

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Target: scaffold0179 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 3159 - 3191
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||||||||||||| ||||||||||    
T  3159 atcatcacaaaagtggggtcagagactattttc 3191  T

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Target: scaffold0159 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0159
Description:

Target: scaffold0159; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Original strand, 35138 - 35170
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    ||||||||||||||||||||| |||||||||||    
T  35138 atcatcacaaaagtggggtcaaggactattttc 35170  T

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Target: scaffold0060 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 44
Target Start/End: Complemental strand, 8464 - 8432
Alignment:
Q  12 atcatcacaaaagtggggtcagggactattttc 44  Q
    |||||||||||| ||||||||||||||||||||    
T  8464 atcatcacaaaaatggggtcagggactattttc 8432  T

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