View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20583_low_12 (Length: 345)
Name: NF20583_low_12
Description: NF20583
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20583_low_12 |
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Alignment Details
Target: chr7 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 1 - 332
Target Start/End: Complemental strand, 44952295 - 44951964
Alignment:
| Q |
1 |
tgtcacatatatggacatcgatcgagtagagtgactacatgagttttgattgcatctgtctctgaatgaacatctaccacattccttgacttttgtctga |
100 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44952295 |
tgtcacatatatggacatcgatcgagtagaatgactacatgagttttgattgcatctgtctctgaatgaacatctaccacattccttgacttttgtctga |
44952196 |
T |
|
| Q |
101 |
agttagaaatgttaccaaaatgtgaaatagaagtatcaagtgaacatgcgtgttcctaagtaaatgtgtatttgataaatgtgcaatatgtatatcttaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44952195 |
agttagaaatgttaccaaaatgtgaaatagaagtatcaagtgaacatgcgtgtttctaagtaaatgtgtatttgataaatgtgcaatatgtatatcttaa |
44952096 |
T |
|
| Q |
201 |
atgaatcttacttctctatacacgatgggtcctataacatacgactaccataaatcctttatttttatgtatacttcttagtatttgtcttgatttttta |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44952095 |
gtgaatcttacttctctatacacgatgggtcctataacatacgactaccataaatcatttatttttatgtatacttcttagtatttgtcttgatttttta |
44951996 |
T |
|
| Q |
301 |
ttataaaccatgtaactcagccattcaccctt |
332 |
Q |
| |
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||||| |||||||||||||||||||||||||| |
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| T |
44951995 |
ttatacaccatgtaactcagccattcaccctt |
44951964 |
T |
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