View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20585_high_25 (Length: 215)
Name: NF20585_high_25
Description: NF20585
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20585_high_25 |
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Alignment Details
Target: chr3 (Bit Score: 161; Significance: 5e-86; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 19 - 187
Target Start/End: Complemental strand, 38830098 - 38829930
Alignment:
| Q |
19 |
tagacaagcataccgaactcatgaagcagttggtgagcgaaaagattgtgaagacgcaagacatcatcaatgttaagaacaacgatggaagaaccgctct |
118 |
Q |
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| T |
38830098 |
tagacaagcataccgaactcatgaagcagttggtgagcgaaaagattgtgaagacgcaagacatcatcaatgttaagaacaacgatggaagaaccgctct |
38829999 |
T |
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| Q |
119 |
tcatgtatccctgattgagaacatccaatgtgaggtggtggagttgttgatgtctgtgccatcaattga |
187 |
Q |
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| T |
38829998 |
tcatgtatctgtgattgagaacatccaatgtgaggtggtggagttgttgatgtctgtgccatcaattga |
38829930 |
T |
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