View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF20586_low_3 (Length: 357)
Name: NF20586_low_3
Description: NF20586
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20586_low_3 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 324; Significance: 0; HSPs: 28)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 18 - 341
Target Start/End: Complemental strand, 8659588 - 8659265
Alignment:
| Q |
18 |
actgtgatggtaaacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagc |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8659588 |
actgtgatggtaaacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagc |
8659489 |
T |
|
| Q |
118 |
cacttctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagt |
217 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8659488 |
cacttctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagt |
8659389 |
T |
|
| Q |
218 |
ggtaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttat |
317 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8659388 |
ggtaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttat |
8659289 |
T |
|
| Q |
318 |
ttcagggaatagacttctgttcat |
341 |
Q |
| |
|
|||||||||||||||||||||||| |
|
|
| T |
8659288 |
ttcagggaatagacttctgttcat |
8659265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 18 - 341
Target Start/End: Complemental strand, 1301685 - 1301362
Alignment:
| Q |
18 |
actgtgatggtaaacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagc |
117 |
Q |
| |
|
||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| || ||||| |||||||||||||||||||| |
|
|
| T |
1301685 |
actgtgatggtaaacggaatattttggtctttgaccttggcggtggtacttttgatgtgtctatccttaccatcaagggcgatgtctttgaagtaaaagc |
1301586 |
T |
|
| Q |
118 |
cacttctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagt |
217 |
Q |
| |
|
|||| |||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
1301585 |
cactggtggaaatactcaccttggaggagaggactttgataatagaatggtgagctactttgtagaggagttcagaaagaagaataaagtggacattagt |
1301486 |
T |
|
| Q |
218 |
ggtaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttat |
317 |
Q |
| |
|
||||||| |||||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||||| |
|
|
| T |
1301485 |
ggtaaccagaaatccttaaggaggttgagaattgcgtgtgagagggcaaaaaggacactctcttttgctttagtcaccaccgttgaggtcgattctttat |
1301386 |
T |
|
| Q |
318 |
ttcagggaatagacttctgttcat |
341 |
Q |
| |
|
|||||||||| ||||||||||||| |
|
|
| T |
1301385 |
ttcagggaatcgacttctgttcat |
1301362 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 22 - 342
Target Start/End: Complemental strand, 8654671 - 8654351
Alignment:
| Q |
22 |
tgatggtaaacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccact |
121 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||| |||||||||||| |
|
|
| T |
8654671 |
tgatggtaaacggaatattttggtatttgatcttggtggtggtacttttgatgtgtctatactcacaattaagggtgatgtctttgacgtaaaagccact |
8654572 |
T |
|
| Q |
122 |
tctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggta |
221 |
Q |
| |
|
|||||||||| ||||| || ||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
8654571 |
gctggaaacacgcacctagggggagaagactttgataacagaatggtgtactactttgtagaggagttcaaaaagaagaataaagtggaaattagcggta |
8654472 |
T |
|
| Q |
222 |
acccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttca |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||||||||||||||||| ||| |||||||| |
|
|
| T |
8654471 |
acccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctcttttacttttgtcaccactgttgaggtagatgctttatttat |
8654372 |
T |
|
| Q |
322 |
gggaatagacttctgttcatc |
342 |
Q |
| |
|
|||||| ||||| | |||||| |
|
|
| T |
8654371 |
gggaatcgacttttcttcatc |
8654351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 20 - 342
Target Start/End: Original strand, 10494319 - 10494641
Alignment:
| Q |
20 |
tgtgatggtaaacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagcca |
119 |
Q |
| |
|
||||| ||||| | ||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| |
|
|
| T |
10494319 |
tgtgagggtaaccgaaatatttttgtctttgatctgggtggtggtacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtaaaagcca |
10494418 |
T |
|
| Q |
120 |
cttctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtgg |
219 |
Q |
| |
|
|| | || |||||||||||||| ||||||||||| |||| |||||||||||| || ||||| ||||||||||||||||||||||| |||||||| ||||| |
|
|
| T |
10494419 |
ctgcaggtaacactcaccttgggggagaggacttcgataacagaatggtgaattattttgttgaggagttcaaaaagaagaataacgtggacatcagtgg |
10494518 |
T |
|
| Q |
220 |
taacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttattt |
319 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||| |||||||||||| |||||||| |
|
|
| T |
10494519 |
gaatccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctctttttcttttgtcaccaccgttgaggtcgatgctttattt |
10494618 |
T |
|
| Q |
320 |
cagggaatagacttctgttcatc |
342 |
Q |
| |
|
|||||| ||||| | |||||| |
|
|
| T |
10494619 |
atgggaatcgacttttcttcatc |
10494641 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 18 - 342
Target Start/End: Complemental strand, 8667644 - 8667320
Alignment:
| Q |
18 |
actgtgatggtaaacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagc |
117 |
Q |
| |
|
|||||||||||| | ||||||||| ||||||||||| ||||| || |||||||||||||||||||| ||||| |||||||||||||||||||| ||||| |
|
|
| T |
8667644 |
actgtgatggtagccgaaatatttttgtctttgatctgggtggcgggacttttgatgtgtctatcctcacaattaagggtgatgtctttgaagtgaaagc |
8667545 |
T |
|
| Q |
118 |
cacttctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagt |
217 |
Q |
| |
|
|||| | ||||||||||||||||| || |||||||| |||| ||||||||||||||| ||||| |||||||| ||||||||||||||||||||||| ||| |
|
|
| T |
8667544 |
cactgcaggaaacactcaccttgggggcgaggacttcgataacagaatggtgaactattttgttgaggagttaaaaaagaagaataaagtggacatcagt |
8667445 |
T |
|
| Q |
218 |
ggtaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttat |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||||| ||| |||||| |
|
|
| T |
8667444 |
cagaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactctcttttgcttttgttaccactgttgaggtagatgctttat |
8667345 |
T |
|
| Q |
318 |
ttcagggaatagacttctgttcatc |
342 |
Q |
| |
|
|| |||||| ||||| |||||||| |
|
|
| T |
8667344 |
ttacgggaatcgacttttgttcatc |
8667320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 20 - 342
Target Start/End: Original strand, 13333401 - 13333723
Alignment:
| Q |
20 |
tgtgatggtaaacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagcca |
119 |
Q |
| |
|
||||||||||| | ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
13333401 |
tgtgatggtaagcgaaatatttttgtctttgatctgggtggtggtacttttgatgtgtctatccttacaattatgggtgatgtctttgaagtaaaagcca |
13333500 |
T |
|
| Q |
120 |
cttctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtgg |
219 |
Q |
| |
|
| | ||||||||||||||||| ||||| ||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||| || || || ||||| |
|
|
| T |
13333501 |
ccgcaggaaacactcaccttgggggagaagacttcgataacagaatggtgaactattttgttgaggagttcaaaaagaagaataacgtcgatatcagtgg |
13333600 |
T |
|
| Q |
220 |
taacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttattt |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||| ||| ||||||||||||||||||| || ||| |||||||| |
|
|
| T |
13333601 |
gaacccaaaatccttaaggaggttgagaactgcctgtgagagggaaaaaaggatactctccttttcttttgtcaccactgttgaagtagatgctttattt |
13333700 |
T |
|
| Q |
320 |
cagggaatagacttctgttcatc |
342 |
Q |
| |
|
|||||| ||||| | |||||| |
|
|
| T |
13333701 |
atgggaatcgacttttcttcatc |
13333723 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 35 - 324
Target Start/End: Complemental strand, 17260449 - 17260160
Alignment:
| Q |
35 |
aatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactc |
134 |
Q |
| |
|
|||||||| |||||||| |||||||| || ||||||||||||||| || ||||||| |||| | | ||||| ||||| || ||||| |||| |||||| |
|
|
| T |
17260449 |
aatatttttgtctttgaccttggtggggggacttttgatgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggtggagacactc |
17260350 |
T |
|
| Q |
135 |
accttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcctt |
234 |
Q |
| |
|
| ||||| || ||||||||||||| ||||||||| |||| |||||||||||| |||||| | ||| ||| ||||||||| ||| ||||||||| |||| |
|
|
| T |
17260349 |
atcttgggggtgaggactttgataatagaatggtgtactattttgtagaggagatcaaaagaacgaaaaaattggacattattgggaacccaaaagcctt |
17260250 |
T |
|
| Q |
235 |
aaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttcaggg |
324 |
Q |
| |
|
|||||||||||||||||| ||||| | ||||| |||||||| |||||||| | ||| |||| ||||||||| || |||||||| |||| |
|
|
| T |
17260249 |
aaggaggttgagaactgcatgtgaaaaagcaaaaaggacactttcttttgcctctgtgaccaatgttgaggtagacgctttatttaaggg |
17260160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 35 - 340
Target Start/End: Original strand, 27830835 - 27831140
Alignment:
| Q |
35 |
aatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactc |
134 |
Q |
| |
|
|||||||| || ||||| ||||||||||| ||||||||||||||| | ||||||| |||| | | ||||| |||| || || ||| |||||||||||| |
|
|
| T |
27830835 |
aatatttttgtgtttgaccttggtggtgggacttttgatgtgtctcttgttacaattaaggataaggtcttccaagttaaggcaactgctggaaacactc |
27830934 |
T |
|
| Q |
135 |
accttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcctt |
234 |
Q |
| |
|
||||||| |||||||||||||||| || ||||||||||| ||||| |||| |||||| |||||||| | ||||||||||||||| ||||||| | |||| |
|
|
| T |
27830935 |
accttggtggagaggactttgataataggatggtgaactattttgtggaggtgttcaagaagaagaaaagagtggacattagtgggaacccaagagcctt |
27831034 |
T |
|
| Q |
235 |
aaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttcagggaatagacttc |
334 |
Q |
| |
|
|||||| ||||||| ||||||| |||||| ||||||||||||||| || ||| ||| ||| ||||| | ||| | |||||| |||| || |||||| |
|
|
| T |
27831035 |
gaggaggctgagaacctaatgtgagaaggcaaaaaggacactctctttttctgttgacactactattgagatagatgccttatttgagggcattgacttc |
27831134 |
T |
|
| Q |
335 |
tgttca |
340 |
Q |
| |
|
| |||| |
|
|
| T |
27831135 |
ttttca |
27831140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 53 - 287
Target Start/End: Complemental strand, 8647067 - 8646833
Alignment:
| Q |
53 |
cttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcaccttggaggagaggact |
152 |
Q |
| |
|
||||||||||| ||||||||||||||| |||||||||| |||| | | |||||| | || |||||||| |||||||||||||||| ||||||||||||| |
|
|
| T |
8647067 |
cttggtggtggaacttttgatgtgtctctccttacaattaaggataaggtctttcatgttaaagccaccgctggaaacactcacctcggaggagaggact |
8646968 |
T |
|
| Q |
153 |
ttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatccttaaggaggttgagaactgc |
252 |
Q |
| |
|
||||||| ||||||||| || |||||| | | || || || |||||||| || |||||||||| ||| ||| ||| | ||||||||||||||||||| || |
|
|
| T |
8646967 |
ttgatagtagaatggtggaccactttgcacaagaatttaacaagaagaacaaggtggacattactggaaactcaagagccttaaggaggttgagaacggc |
8646868 |
T |
|
| Q |
253 |
ctgtgagagggcaaagaggacactctcttttgctt |
287 |
Q |
| |
|
|| ||||| ||||| |||||||| |||||||||| |
|
|
| T |
8646867 |
atgcgagagagcaaaaaggacactatcttttgctt |
8646833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 33 - 334
Target Start/End: Complemental strand, 6789722 - 6789421
Alignment:
| Q |
33 |
aaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacac |
132 |
Q |
| |
|
|||||||||| ||||| || ||||||||||| ||||| |||||||||||| | ||||| || | | | ||||| |||| || ||||| ||||||||| |
|
|
| T |
6789722 |
aaaatattttcgtcttcgaccttggtggtggcactttcgatgtgtctatcttaacaatcaaagataaggtcttccaagttaaggccaccggtggaaacac |
6789623 |
T |
|
| Q |
133 |
tcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcc |
232 |
Q |
| |
|
|||||| ||||||||||||||||||| | || |||| |||||||||| ||||||||| || | |||||| |||||||| |||| ||| ||| ||| || |
|
|
| T |
6789622 |
tcacctcggaggagaggactttgataaccgattggtaaactactttgcagaggagtttaagaggaagaacaaagtggatattactggaaactcaagggcc |
6789523 |
T |
|
| Q |
233 |
ttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttcagggaatagact |
332 |
Q |
| |
|
||||| |||||||||||||| ||||| ||||| || ||| ||||||||||| | | ||||| ||| ||||||| || |||||||||||||| || |||| |
|
|
| T |
6789522 |
ttaagaaggttgagaactgcgtgtgaaagggccaaaagggtactctcttttgttgtcgtcactactattgaggtagactctttatttcagggcatcgact |
6789423 |
T |
|
| Q |
333 |
tc |
334 |
Q |
| |
|
|| |
|
|
| T |
6789422 |
tc |
6789421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 8585649 - 8585817
Alignment:
| Q |
18 |
actgtgatggtaaacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagc |
117 |
Q |
| |
|
||||||||||| ||| ||||||||| || ||||||||||||||||| ||||||||||||||| |||| ||||| || ||||||||||||||||| ||||| |
|
|
| T |
8585649 |
actgtgatggtgaacgaaatatttttgtgtttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagc |
8585748 |
T |
|
| Q |
118 |
cacttctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagagga |
186 |
Q |
| |
|
|| ||||||| ||||||||||| |||| ||||||||||| ||||||| ||||||||||||| ||||| |
|
|
| T |
8585749 |
aaccgctggaaatactcaccttgggggaggggactttgataacagaatgttgaactactttgttgagga |
8585817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 20 - 166
Target Start/End: Complemental strand, 8628755 - 8628609
Alignment:
| Q |
20 |
tgtgatggtaaacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagcca |
119 |
Q |
| |
|
||||||||| ||| ||||||||| || ||||||||||||||||| ||||||||||||||| |||| ||||| || ||||||||||||||||| ||||||| |
|
|
| T |
8628755 |
tgtgatggtgaacgaaatatttttgtgtttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagcca |
8628656 |
T |
|
| Q |
120 |
cttctggaaacactcaccttggaggagaggactttgatagcagaatg |
166 |
Q |
| |
|
|| ||||||| ||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
8628655 |
ctgctggaaatactcaccttggtggagaggactttgataacagaatg |
8628609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 34 - 276
Target Start/End: Complemental strand, 8545842 - 8545600
Alignment:
| Q |
34 |
aaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacact |
133 |
Q |
| |
|
||||||||| ||||||| ||||| ||||| ||||||||||||||||| |||||||| || | | |||||||| || || |||||| ||||| ||||| |
|
|
| T |
8545842 |
aaatatttttatctttgaccttggcggtggaacttttgatgtgtctattcttacaattaaaaataaggtctttgatgtcaaggccactgctggagacact |
8545743 |
T |
|
| Q |
134 |
caccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcct |
233 |
Q |
| |
|
|||| || || || |||||||||| |||||||||||| |||||||| |||||||||| | |||||| || | ||| |||||| | |||||| || ||| |
|
|
| T |
8545742 |
tacctaggcggtgaagactttgataacagaatggtgaattactttgtgaaggagttcaagaggaagaacaatgaggatattagtcggaacccagaagcct |
8545643 |
T |
|
| Q |
234 |
taaggaggttgagaactgcctgtgagagggcaaagaggacact |
276 |
Q |
| |
|
| ||||||||||||||||||||||||| |||||| |||||||| |
|
|
| T |
8545642 |
tgaggaggttgagaactgcctgtgagaaggcaaaaaggacact |
8545600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 45 - 276
Target Start/End: Original strand, 29581811 - 29582042
Alignment:
| Q |
45 |
tctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcaccttggagg |
144 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| | || ||| | |||| |||| |||||||| || |||||| |||| | |||||||| ||||| |
|
|
| T |
29581811 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacactcaaggatgataagtttgaagtgaaggccactgctggcgatactcacctaggagg |
29581910 |
T |
|
| Q |
145 |
agaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatccttaaggaggttg |
244 |
Q |
| |
|
|||||||||||||| | |||||||||| ||||||| | ||||| || | |||||| || ||||||||||||| ||||||||| | ||||||| | || |
|
|
| T |
29581911 |
agaggactttgataaccgaatggtgaattactttgcgaatgagttgaagaggaagaacaatttggacattagtgggaacccaaaagctttaaggaagctg |
29582010 |
T |
|
| Q |
245 |
agaactgcctgtgagagggcaaagaggacact |
276 |
Q |
| |
|
||||| || ||||||||||||||||||||||| |
|
|
| T |
29582011 |
agaacagcttgtgagagggcaaagaggacact |
29582042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 35 - 342
Target Start/End: Complemental strand, 3147472 - 3147165
Alignment:
| Q |
35 |
aatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactc |
134 |
Q |
| |
|
|||||||| ||||||| | |||||||| ||||||||||||||| | |||||||| |||| | | |||||| |||| || |||| | |||||||| | |
|
|
| T |
3147472 |
aatatttttatctttgacttgggtggtgggacttttgatgtgtctcttcttacaattaaggataaggtctttcaagttaaggccatcgcaggaaacaccc |
3147373 |
T |
|
| Q |
135 |
accttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcctt |
234 |
Q |
| |
|
||||||| |||||||||||||||| || |||||||||||||||| | |||||| || |||||||| || || |||||||||| ||| ||| | |||| |
|
|
| T |
3147372 |
accttgggggagaggactttgataataggatggtgaactactttgcacgggagtttaagaagaagaacaaggtagacattagtgagaactcaagagcctt |
3147273 |
T |
|
| Q |
235 |
aaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttcagggaatagacttc |
334 |
Q |
| |
|
||||||||||| ||| || ||||| || ||||| | | ||| ||||||||| | ||||||| ||||| | |||||||||||||||||| | ||||| |
|
|
| T |
3147272 |
aaggaggttgaaaacggcgtgtgaaagagcaaaacgaatactatcttttgctgtcatcaccaccattgagatagattctttatttcagggatttgactta |
3147173 |
T |
|
| Q |
335 |
tgttcatc |
342 |
Q |
| |
|
| |||||| |
|
|
| T |
3147172 |
ttttcatc |
3147165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 35 - 324
Target Start/End: Complemental strand, 17268147 - 17267858
Alignment:
| Q |
35 |
aatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactc |
134 |
Q |
| |
|
|||||||| |||||||| ||||||||||| ||||||||||||||| || ||||||| |||| | | ||||| ||||| || ||||| |||| |||||| |
|
|
| T |
17268147 |
aatatttttgtctttgaccttggtggtgggacttttgatgtgtctctcgttacaattaaggataaggtcttcgaagttaaggccaccggtggagacactc |
17268048 |
T |
|
| Q |
135 |
accttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcctt |
234 |
Q |
| |
|
| ||||| || ||||||||||||| |||||||| |||| ||||| ||||| |||||| ||| || ||| || | ||| ||| ||||||||| || | |
|
|
| T |
17268047 |
atcttgggggtgaggactttgataatagaatggtatactattttgttgaggaaatcaaaaggaaaaaaaaattgaaaattgttgggaacccaaaagccat |
17267948 |
T |
|
| Q |
235 |
aaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttcaggg |
324 |
Q |
| |
|
||||||||||||||||| ||||| | ||||| |||||||| ||||| || | ||| |||| ||||||||| || |||||||| |||| |
|
|
| T |
17267947 |
gaggaggttgagaactgcatgtgaaaaagcaaaaaggacactttctttcgcctctgtgaccaatgttgaggtagacgctttatttaaggg |
17267858 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 45 - 276
Target Start/End: Original strand, 29577642 - 29577873
Alignment:
| Q |
45 |
tctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcaccttggagg |
144 |
Q |
| |
|
||||||||||||||||||| || |||||||||||| | || ||| | |||| |||| ||||||||||| |||||| |||| | |||||||| ||||| |
|
|
| T |
29577642 |
tctttgatcttggtggtggcacctttgatgtgtctcttctcacacttaaggatgatagttttgaagtaaaggccactgctggtgatactcacctaggagg |
29577741 |
T |
|
| Q |
145 |
agaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatccttaaggaggttg |
244 |
Q |
| |
|
||||||||| |||| | |||||||| | ||||||| | ||||| || | |||||| || |||||||||||| ||||||||| | ||||||| | || |
|
|
| T |
29577742 |
agaggacttcgataataaaatggtgagccactttgtgaatgagttgaagaggaagaacaatgtggacattagtttgaacccaaaagctttaaggaagctg |
29577841 |
T |
|
| Q |
245 |
agaactgcctgtgagagggcaaagaggacact |
276 |
Q |
| |
|
|||||||| |||||||||||||||||| |||| |
|
|
| T |
29577842 |
agaactgcttgtgagagggcaaagagggcact |
29577873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 38 - 216
Target Start/End: Original strand, 8636306 - 8636484
Alignment:
| Q |
38 |
attttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcacc |
137 |
Q |
| |
|
||||| || |||||||||||||||||||| || || |||||||| || | ||| || ||||| ||||||||||| ||||||||| | ||| |||| |||| |
|
|
| T |
8636306 |
attttcgtatttgatcttggtggtggtacattcgacgtgtctatactcaaaattaaaggtgaagtctttgaagttaaagccactgccggagacacacacc |
8636405 |
T |
|
| Q |
138 |
ttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattag |
216 |
Q |
| |
|
||||||||||||||||||||| |||||||||| | || ||||||||||| |||| | |||||| || || |||||||| |
|
|
| T |
8636406 |
ttggaggagaggactttgataacagaatggtggaatattttgtagaggaaatcaagaggaagaacaaggtagacattag |
8636484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 276
Target Start/End: Original strand, 8382835 - 8383077
Alignment:
| Q |
34 |
aaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacact |
133 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||||||||||||| |||| ||||| ||| | ||||||||| || || |||||| | ||| ||||| |
|
|
| T |
8382835 |
aaatattttcatctttgatcttggtggtggaacttttgatgtgtctctcctcacaattaagaataatgtctttgttgtgaaggccactgccggagacact |
8382934 |
T |
|
| Q |
134 |
caccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcct |
233 |
Q |
| |
|
|| || ||||| || ||||| |||| |||||| ||||| |||||||| || |||||||| | |||| |||| |||||||||||| |||||||| | |
|
|
| T |
8382935 |
catctaggaggtgaagacttagataacagaatcgtgaagtactttgttgacgagttcaagaggaagcataataaggacattagtgggaacccaaaggctc |
8383034 |
T |
|
| Q |
234 |
taaggaggttgagaactgcctgtgagagggcaaagaggacact |
276 |
Q |
| |
|
| || ||||| ||||| || || ||||||||||| |||||||| |
|
|
| T |
8383035 |
ttagaaggttaagaacggcttgcgagagggcaaaaaggacact |
8383077 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 276
Target Start/End: Complemental strand, 8570520 - 8570278
Alignment:
| Q |
34 |
aaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacact |
133 |
Q |
| |
|
||||||||| ||||||| ||||| ||||| ||||||||||||||||| || ||| | |||| | | || |||||| || |||||| ||||| ||||| |
|
|
| T |
8570520 |
aaatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaaggataacaactatgaagtcaaggccactgctggagacact |
8570421 |
T |
|
| Q |
134 |
caccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcct |
233 |
Q |
| |
|
||||| ||||| || || ||||||| ||||||| ||| ||||||| || ||||||| |||||||| || | ||| |||||| | ||||||||| ||| |
|
|
| T |
8570420 |
cacctgggaggtgaagattttgataacagaatgttgactcactttgtgaagaagttcaagaagaagaacaacgaggatattagtaggaacccaaaagcct |
8570321 |
T |
|
| Q |
234 |
taaggaggttgagaactgcctgtgagagggcaaagaggacact |
276 |
Q |
| |
|
| |||||||| ||||| || |||||||||||||| |||||||| |
|
|
| T |
8570320 |
tgaggaggttaagaacagcttgtgagagggcaaaaaggacact |
8570278 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 34 - 232
Target Start/End: Complemental strand, 8559542 - 8559339
Alignment:
| Q |
34 |
aaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacact |
133 |
Q |
| |
|
||||||||| |||||||||| |||||||| ||||||||||| ||| | || ||||| ||| | || |||||||||| || |||||||| ||| |||| |
|
|
| T |
8559542 |
aaatattttcatctttgatctcggtggtggaacttttgatgtttctcttctcacaattaagaataatctctttgaagtcaaggccacttccggagacaca |
8559443 |
T |
|
| Q |
134 |
caccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaa-----taaagtggacattagtggtaacccaaa |
228 |
Q |
| |
|
||||| ||||||||||||||||||| |||||||||||| |||||||| | ||||| | | |||||| |||||| |||||||||||| ||||||| |
|
|
| T |
8559442 |
cacctcggaggagaggactttgataacagaatggtgaaacactttgtaaaagagtttgagaggaagaacaaattaaagttgacattagtggtgacccaaa |
8559343 |
T |
|
| Q |
229 |
atcc |
232 |
Q |
| |
|
|||| |
|
|
| T |
8559342 |
atcc |
8559339 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 34 - 180
Target Start/End: Complemental strand, 8602183 - 8602037
Alignment:
| Q |
34 |
aaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacact |
133 |
Q |
| |
|
||||||||| | ||||||||||||||||| ||||||||||| ||| | || ||||| ||| | || |||||||||| || |||||||| ||| |||| |
|
|
| T |
8602183 |
aaatattttcatatttgatcttggtggtggaacttttgatgtttctcttctcacaattaagaataatctctttgaagtcaaggccacttccggagacaca |
8602084 |
T |
|
| Q |
134 |
caccttggaggagaggactttgatagcagaatggtgaactactttgt |
180 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||| ||||||| |
|
|
| T |
8602083 |
caccttggaggagaggactttgataaccgaatggtgaaccactttgt |
8602037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 48 - 276
Target Start/End: Original strand, 7877706 - 7877934
Alignment:
| Q |
48 |
ttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcaccttggaggaga |
147 |
Q |
| |
|
|||||||||||||||| ||||| ||||||||| | || ||| | || | |||| |||||| |||| ||| ||| | ||| | |||||||| || ||||| |
|
|
| T |
7877706 |
ttgatcttggtggtggcactttcgatgtgtctcttctcacactaaaagatgatagctttgatgtaatagctactgccggagatactcacctaggtggaga |
7877805 |
T |
|
| Q |
148 |
ggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatccttaaggaggttgaga |
247 |
Q |
| |
|
||||||||||| ||||||| ||||| | || || |||||| || | ||||||||||||||||||| |||| ||||| | || | |||||||||||| |
|
|
| T |
7877806 |
ggactttgataacagaatgttgaaccatttagtgatggagtttaagaggaagaataaagtggacattggtggaaacccgagggcccttaggaggttgaga |
7877905 |
T |
|
| Q |
248 |
actgcctgtgagagggcaaagaggacact |
276 |
Q |
| |
|
||||| ||||||||||| || |||||||| |
|
|
| T |
7877906 |
actgcatgtgagagggctaaaaggacact |
7877934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 45 - 168
Target Start/End: Complemental strand, 8590836 - 8590713
Alignment:
| Q |
45 |
tctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcaccttggagg |
144 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||| | || ||| | || |||||| |||||| |||||||||||||| ||| | || ||||| ||||| |
|
|
| T |
8590836 |
tctttgatcttggtggtggcacttttgatgtgtctcttctcacactcaaaggtgatagctttgatgtaaaagccacttccggagatacccacctaggagg |
8590737 |
T |
|
| Q |
145 |
agaggactttgatagcagaatggt |
168 |
Q |
| |
|
|||||||||||||| ||||||||| |
|
|
| T |
8590736 |
agaggactttgataacagaatggt |
8590713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 34 - 276
Target Start/End: Complemental strand, 8576535 - 8576293
Alignment:
| Q |
34 |
aaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacact |
133 |
Q |
| |
|
||||||||| ||||||| ||||| ||||| ||||||||||||||||| || ||| | ||| ||||||| ||||| || |||||| | ||| ||||| |
|
|
| T |
8576535 |
aaatatttttatctttgaccttggcggtggaacttttgatgtgtctattctcacagttaagaacaatgtcttcgaagtcaaggccactgccggagacact |
8576436 |
T |
|
| Q |
134 |
caccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcct |
233 |
Q |
| |
|
||||| ||||| | |||||||||| || ||||||| | ||||||| ||||||||| || ||| | |||| ||| ||||||| || ||||| ||| |
|
|
| T |
8576435 |
cacctaggaggccaagactttgataacataatggtggatcactttgttaaggagttcaggaacaagtacaaagaggatattagtgagaattcaaaagcct |
8576336 |
T |
|
| Q |
234 |
taaggaggttgagaactgcctgtgagagggcaaagaggacact |
276 |
Q |
| |
|
||||||||||||||||||| ||||| | |||||| |||||||| |
|
|
| T |
8576335 |
taaggaggttgagaactgcttgtgaaaaggcaaaaaggacact |
8576293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 34 - 276
Target Start/End: Complemental strand, 8581909 - 8581667
Alignment:
| Q |
34 |
aaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacact |
133 |
Q |
| |
|
||||||||| ||||||| ||||| ||||| ||||||||||||||||| || ||| | ||| | | | || |||||| || |||||| ||||| ||||| |
|
|
| T |
8581909 |
aaatatttttatctttgaccttggaggtggaacttttgatgtgtctattctcacagttaagaataacgactatgaagtcaaggccactgctggagacact |
8581810 |
T |
|
| Q |
134 |
caccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcct |
233 |
Q |
| |
|
||||| ||||| || || ||||||| |||||||||||| ||||||| ||||||||| | || |||||| ||| |||| ||| || |||||| || |
|
|
| T |
8581809 |
cacctgggaggggaagattttgataacagaatggtgaatcactttgtgtcggagttcaagagaaaacataaagaggagattattggaaatccaaaagcca |
8581710 |
T |
|
| Q |
234 |
taaggaggttgagaactgcctgtgagagggcaaagaggacact |
276 |
Q |
| |
|
| || |||||||| ||||| |||||||| || || |||||||| |
|
|
| T |
8581709 |
ttagaaggttgaggactgcttgtgagagagcgaaaaggacact |
8581667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 45 - 158
Target Start/End: Complemental strand, 8538234 - 8538121
Alignment:
| Q |
45 |
tctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcaccttggagg |
144 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||| |||||||| ||||| | ||| |||| ||| || |||||| | ||| | |||||||||||||| |
|
|
| T |
8538234 |
tctttgatcttggtggtggaacttttgatgtatctctccttacattgaagaataatgcctttacagtcaaggccactgccggagatactcaccttggagg |
8538135 |
T |
|
| Q |
145 |
agaggactttgata |
158 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
8538134 |
agaggactttgata |
8538121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 276
Target Start/End: Complemental strand, 8610126 - 8609884
Alignment:
| Q |
34 |
aaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacact |
133 |
Q |
| |
|
||||||||| ||||||||||||||||||| ||||| ||||||||| | || ||||| || ||| || || || || || ||| ||||| | ||| |
|
|
| T |
8610126 |
aaatatttttatctttgatcttggtggtgggactttcgatgtgtctgttctcacaattaaaaacaatgctttcgatgtcaaggctactgctggagatact |
8610027 |
T |
|
| Q |
134 |
caccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcct |
233 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||| || ||||||| |||||||||||| |||| || | || || ||||| ||| | | | |
|
|
| T |
8610026 |
caccttggaggagaggactttgatcacagaatggttaatcactttgtgaaggagttcaaaaggaagcattcaaaagatatcagtgggaactcgagggctc |
8609927 |
T |
|
| Q |
234 |
taaggaggttgagaactgcctgtgagagggcaaagaggacact |
276 |
Q |
| |
|
| ||||||||||| ||||| ||||||||||||||||||||||| |
|
|
| T |
8609926 |
ttaggaggttgaggactgcttgtgagagggcaaagaggacact |
8609884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 21 - 343
Target Start/End: Original strand, 4678504 - 4678825
Alignment:
| Q |
21 |
gtgatggtaaacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccac |
120 |
Q |
| |
|
||||| |||||| |||||| || |||||||| |||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||||||||| |
|
|
| T |
4678504 |
gtgattgtaaacgaaatatatttgtctttgaccttggtggtggtacttttgatgtgtctatccttaaaatcaagggtggtgtctttgaagtaaaagccac |
4678603 |
T |
|
| Q |
121 |
ttctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggt |
220 |
Q |
| |
|
| |||||||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
4678604 |
tgctggaaacactcacctaggtggagaggactttgataacagaatggtgaactactttgtagaggagttcaaaaagaagaataatgtggacattagtaag |
4678703 |
T |
|
| Q |
221 |
aacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttc |
320 |
Q |
| |
|
||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| || ||||||||||||| |
|
|
| T |
4678704 |
aacgcaaaacccttaaggaggttgagaactgcctgcgagagggcaaagaggacactctctttcgcctttgtcaccactgttga-gtagattctttatttc |
4678802 |
T |
|
| Q |
321 |
agggaatagacttctgttcatct |
343 |
Q |
| |
|
||||||||||||| | ||||||| |
|
|
| T |
4678803 |
agggaatagacttttcttcatct |
4678825 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 34 - 278
Target Start/End: Original strand, 34466752 - 34466996
Alignment:
| Q |
34 |
aaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacact |
133 |
Q |
| |
|
||||||||| |||||||| ||||||||||| ||||||||||||||| |||||||||| |||| | ||||||||||||| || ||||||||||| |||||| |
|
|
| T |
34466752 |
aaatattttcgtctttgaccttggtggtgggacttttgatgtgtctctccttacaattaaggataatgtctttgaagttaaggccacttctggtaacact |
34466851 |
T |
|
| Q |
134 |
caccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcct |
233 |
Q |
| |
|
||||| ||| ||||||||||||||| ||||||| |||| |||||| | |||||||||| | |||| |||| ||| |||||||| ||||| | | | | |
|
|
| T |
34466852 |
cacctcggacgagaggactttgataatagaatggcgaaccactttgcaaaggagttcaagaggaagcataataaggatattagtggaaaccctagagctt |
34466951 |
T |
|
| Q |
234 |
taaggaggttgagaactgcctgtgagagggcaaagaggacactct |
278 |
Q |
| |
|
| ||||||||||||||||| || |||| |||||||||||||||| |
|
|
| T |
34466952 |
tgaggaggttgagaactgcgtgcgagaatgcaaagaggacactct |
34466996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 34 - 342
Target Start/End: Complemental strand, 15595243 - 15594935
Alignment:
| Q |
34 |
aaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacact |
133 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||||||||||||||| ||||| |||| | ||||| |||| || ||||| ||||||||| |
|
|
| T |
15595243 |
aaatatttttgtctttgatcttggtggtggcacttttgatgtgtctatcctaacaattaaggacaaggtcttccaagttaaggccacaggcggaaacact |
15595144 |
T |
|
| Q |
134 |
caccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcct |
233 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||| |||||||||| |||| ||||| | |||||| |||||||| |||| ||| ||||||| ||| |
|
|
| T |
15595143 |
caccttggaggagaggactttgataacagaatggtcaactactttgcgcaggaattcaagacgaagaacaaagtggatattactgggaacccaagggcct |
15595044 |
T |
|
| Q |
234 |
taaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttcagggaatagactt |
333 |
Q |
| |
|
| ||||| ||||||||||| || || |||||||| ||| |||||||||| || |||||| || ||||||| |||| ||||||| | || || ||||| |
|
|
| T |
15595043 |
tgaggagattgagaactgcgtgcgaaagggcaaaaagggtactctcttttactactgtcactaccattgaggtagattgtttatttaacggtattgactt |
15594944 |
T |
|
| Q |
334 |
ctgttcatc |
342 |
Q |
| |
|
|| |||||| |
|
|
| T |
15594943 |
cttttcatc |
15594935 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 11)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 20 - 342
Target Start/End: Original strand, 16657462 - 16657784
Alignment:
| Q |
20 |
tgtgatggtaaacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagcca |
119 |
Q |
| |
|
||||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||| |
|
|
| T |
16657462 |
tgtgatggtaaacggaatatttttgtctttgaccttggcggtggtacttttgatgtgtctatccttacaattaagggtgatgtttttgaggtaaaagcca |
16657561 |
T |
|
| Q |
120 |
cttctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtgg |
219 |
Q |
| |
|
|| | ||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||||||| ||||| |
|
|
| T |
16657562 |
ctgccggaaacactcaccttgggggagaggactttgataacagaacggtgaactactttgtagaggagtttcaaaagaagaataaggtggacataagtgg |
16657661 |
T |
|
| Q |
220 |
taacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttattt |
319 |
Q |
| |
|
||| ||| | |||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
16657662 |
gaactcaagagccttgaggaggttgagaactgcatgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtagattctttattt |
16657761 |
T |
|
| Q |
320 |
cagggaatagacttctgttcatc |
342 |
Q |
| |
|
|||||||| ||||| | |||||| |
|
|
| T |
16657762 |
cagggaattgacttttcttcatc |
16657784 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 282
Target Start/End: Original strand, 16661937 - 16662199
Alignment:
| Q |
20 |
tgtgatggtaaacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagcca |
119 |
Q |
| |
|
||||||||| || ||||||||| |||||||||||||||||||| ||||||||||||||| |||| ||||| || ||||||||||||||||| ||||||| |
|
|
| T |
16661937 |
tgtgatggtgaaagaaatatttttgtctttgatcttggtggtgggacttttgatgtgtctctcctcacaattaaaggtgatgtctttgaagttaaagcca |
16662036 |
T |
|
| Q |
120 |
cttctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtgg |
219 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||| ||||||| ||||||||||||| | || || || | |||||| |||||||| || | | | |
|
|
| T |
16662037 |
cttctggaaacactcacctcgggggagaggactttgataacagaatgttgaactactttgtgaaagaatttaataggaagaacaaagtggatatcactag |
16662136 |
T |
|
| Q |
220 |
taacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttt |
282 |
Q |
| |
|
|| |||| | |||| ||||||||||||||| | ||||| | ||| || |||||||||||||| |
|
|
| T |
16662137 |
gaatccaagagccttgaggaggttgagaacttcttgtgaaaaggcgaaaaggacactctcttt |
16662199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 34 - 342
Target Start/End: Complemental strand, 7542435 - 7542127
Alignment:
| Q |
34 |
aaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacact |
133 |
Q |
| |
|
||||||||| || ||||||||||| ||||| ||||||||||||||| | || || || ||||| | ||| |||| || |||||| |||| |||||| |
|
|
| T |
7542435 |
aaatatttttgtttttgatcttggcggtggcacttttgatgtgtctttactaacgattaagggcaacaacttccaagttaaggccactgctggcaacact |
7542336 |
T |
|
| Q |
134 |
caccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcct |
233 |
Q |
| |
|
|||||||| ||||| |||||||||| ||||||| ||||||||||||| | |||||||| | ||||| ||||||||||||||||| || |||||| ||| |
|
|
| T |
7542335 |
caccttggtggagaagactttgataatagaatggcgaactactttgtacaagagttcaagagaaagaacaaagtggacattagtgggaatccaaaagcct |
7542236 |
T |
|
| Q |
234 |
taaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttcagggaatagactt |
333 |
Q |
| |
|
| ||||||||||||||||| |||||||||||||| || |||| ||||| | |||| ||||| ||||||| |||||||||||||| || || ||||| |
|
|
| T |
7542235 |
tgaggaggttgagaactgcttgtgagagggcaaaaagatcactttctttccttgttgttgccactattgaggtagattctttatttcaaggcattgactt |
7542136 |
T |
|
| Q |
334 |
ctgttcatc |
342 |
Q |
| |
|
| |||||| |
|
|
| T |
7542135 |
ttcttcatc |
7542127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 34 - 318
Target Start/End: Complemental strand, 43625621 - 43625337
Alignment:
| Q |
34 |
aaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacact |
133 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||| |||| | ||||| || ||||||||| ||||||||||| |
|
|
| T |
43625621 |
aaatattttcatctttgaccttggtggtggtacttttgatgtgtctatacttacaattaaggacaaggtcttccgtgttaaagccactgctggaaacact |
43625522 |
T |
|
| Q |
134 |
caccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcct |
233 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| ||| || || | |||||||| || ||||| |||| ||| ||| ||| | || |
|
|
| T |
43625521 |
caccttggaggagaggactttgatgatagaatggtgaactactttgcagaagaatttgagaagaagaacaatgtggatattattggaaactcaagagcca |
43625422 |
T |
|
| Q |
234 |
taaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatt |
318 |
Q |
| |
|
|||| ||||||||||| || || ||||| | ||| |||||||| |||||||||| ||| |||| ||||||| ||||||||||| |
|
|
| T |
43625421 |
taagaaggttgagaacggcatgcgagagaggaaaaaggacactgtcttttgcttcgttcagcactattgaggtagattctttatt |
43625337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 34 - 267
Target Start/End: Complemental strand, 12234898 - 12234665
Alignment:
| Q |
34 |
aaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacact |
133 |
Q |
| |
|
||||||||| || |||||||| || ||||| ||||||||||||||| |||| ||||| || ||| ||||||| |||| |||||||| | ||||||||| |
|
|
| T |
12234898 |
aaatatttttgtttttgatctcggcggtggcacttttgatgtgtctctcctaacaatcaaaggtaatgtcttccaagttaaagccacagccggaaacact |
12234799 |
T |
|
| Q |
134 |
caccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcct |
233 |
Q |
| |
|
||||| || |||||||||||||||| ||||||||| |||||| ||| | |||||||| | ||||| ||||||||||| ||||| || |||||| ||| |
|
|
| T |
12234798 |
cacctcgggggagaggactttgataacagaatggtaaactaccttgctcaagagttcaatagaaagaaaaaagtggacatgagtggaaatccaaaagcct |
12234699 |
T |
|
| Q |
234 |
taaggaggttgagaactgcctgtgagagggcaaa |
267 |
Q |
| |
|
| |||||||| |||||||| |||||||||||||| |
|
|
| T |
12234698 |
tgaggaggttaagaactgcttgtgagagggcaaa |
12234665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 35 - 321
Target Start/End: Complemental strand, 14703616 - 14703330
Alignment:
| Q |
35 |
aatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactc |
134 |
Q |
| |
|
||||| || ||||||||||||||||||||||||||||| |||||| |||| ||||| ||||| ||||| || | || || ||| |||||||||||| |
|
|
| T |
14703616 |
aatatatttgtctttgatcttggtggtggtacttttgacgtgtctctcctaacaattaagggcaccgtcttccaaattaaggctactgctggaaacactc |
14703517 |
T |
|
| Q |
135 |
accttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcctt |
234 |
Q |
| |
|
|||| || ||||||||||| |||| ||||||||||||||||||||| | |||||||| | || || | | ||||||||||||| || |||||| |||| |
|
|
| T |
14703516 |
acctcgggggagaggacttcgataacagaatggtgaactactttgttcaagagttcaagagaaaaaacagattggacattagtggaaatccaaaagcctt |
14703417 |
T |
|
| Q |
235 |
aaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttca |
321 |
Q |
| |
|
|||||| |||||||| || || ||||||||||| || ||||| ||||| ||||| ||||| ||||||| ||| |||||||||| |
|
|
| T |
14703416 |
aaggagcttgagaaccgcttgcgagagggcaaaaagaacactttctttccaagttgtcgccactattgaggtagatgctttatttca |
14703330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 38 - 321
Target Start/End: Original strand, 12245369 - 12245652
Alignment:
| Q |
38 |
attttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcacc |
137 |
Q |
| |
|
||||| || ||||||||||||||||| |||||||| || |||||||| || || |||| | | |||| |||| || |||||| ||||||||||||||| |
|
|
| T |
12245369 |
atttttgtgtttgatcttggtggtggcacttttgacgtttctatcctaactattaaggataacatcttccaagttaaggccactgctggaaacactcacc |
12245468 |
T |
|
| Q |
138 |
ttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatccttaag |
237 |
Q |
| |
|
||||||||||||| ||||||| |||||||| |||||||||| | |||||||||| | ||||| ||| |||| ||||||| | ||||| |||| || |
|
|
| T |
12245469 |
ttggaggagaggattttgataatagaatggtaaactactttgcacaggagttcaagagaaagaacaaattggatattagtgcaagttcaaaagccttgag |
12245568 |
T |
|
| Q |
238 |
gaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttca |
321 |
Q |
| |
|
||| ||||||||||| |||||||||||||| || | ||| || ||| | |||| | ||| ||||||| |||||||||||||| |
|
|
| T |
12245569 |
gagattgagaactgcttgtgagagggcaaaaagaatactttcgtttcttgttgttgcaactattgaggtagattctttatttca |
12245652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 35 - 267
Target Start/End: Original strand, 12258541 - 12258773
Alignment:
| Q |
35 |
aatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactc |
134 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||||||||| | || || || |||| | |||||||| |||| || || || |||||||||| | |
|
|
| T |
12258541 |
aatatttttgtctttgatcttggtggtggcacttttgatgtgtctctactaaccattaaggataatgtctttcaagttaaggctacagctggaaacacgc |
12258640 |
T |
|
| Q |
135 |
accttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcctt |
234 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| | ||||| ||||| || || ||||| || |||| | | || |
|
|
| T |
12258641 |
accttggaggagaggactttgataatagaatggtgagttactttgtagaagagttcaagagaaagaacaaagtagatataagtggaaatccaagagcttt |
12258740 |
T |
|
| Q |
235 |
aaggaggttgagaactgcctgtgagagggcaaa |
267 |
Q |
| |
|
||||| |||| ||| || |||||||| ||||| |
|
|
| T |
12258741 |
gaggagattgaaaacagcttgtgagagtgcaaa |
12258773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 38 - 321
Target Start/End: Complemental strand, 11999599 - 11999329
Alignment:
| Q |
38 |
attttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcacc |
137 |
Q |
| |
|
||||| |||||||||||||| ||||| ||||||||| ||||||| || ||||| |||| ||||||| |||| || ||||| |||||||||||||| |
|
|
| T |
11999599 |
attttagtctttgatcttggcggtggcacttttgatttgtctatactaacaattaaggacaatgtcttccaagttaaggccacagctggaaacactcact |
11999500 |
T |
|
| Q |
138 |
ttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatccttaag |
237 |
Q |
| |
|
| ||||||||||| |||||| | ||||||||| | |||||||| | ||||| ||||||| |||||||| | ||||| |||| || |
|
|
| T |
11999499 |
tcggaggagaggattttgat-------------aatactttgtacaagagttcaagataaagaacgaagtggatattagtggaagttcaaaagccttgag |
11999413 |
T |
|
| Q |
238 |
gaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttatttca |
321 |
Q |
| |
|
||||||||||||||| |||||||||||||| || | ||| || ||| | |||| | ||| ||||||| |||||||||||||| |
|
|
| T |
11999412 |
gaggttgagaactgcttgtgagagggcaaaaagaatactatcatttcttgttgttgcaactattgaggtagattctttatttca |
11999329 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 75
Target Start/End: Original strand, 273279 - 273316
Alignment:
| Q |
38 |
attttggtctttgatcttggtggtggtacttttgatgt |
75 |
Q |
| |
|
|||||||||||||| ||||| ||||||||||||||||| |
|
|
| T |
273279 |
attttggtctttgaccttggaggtggtacttttgatgt |
273316 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 270
Target Start/End: Original strand, 17718013 - 17718146
Alignment:
| Q |
137 |
cttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatccttaa |
236 |
Q |
| |
|
|||||||| ||||| ||| ||| ||||||||||||| ||||||| | |||||||| | ||||| || |||||||||||| ||||||| | | | | |
|
|
| T |
17718013 |
cttggaggtgaggattttaataacagaatggtgaaccactttgttcaagagttcaagagaaagaacaagaaggacattagtggcaacccaagagctctta |
17718112 |
T |
|
| Q |
237 |
ggaggttgagaactgcctgtgagagggcaaagag |
270 |
Q |
| |
|
|| |||||| ||||| ||||||||||| ||||| |
|
|
| T |
17718113 |
tgaagttgaggactgcttgtgagagggcgaagag |
17718146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 177; Significance: 2e-95; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 18 - 342
Target Start/End: Original strand, 9335834 - 9336158
Alignment:
| Q |
18 |
actgtgatggtaaacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagc |
117 |
Q |
| |
|
||||||||||||| | ||||||||| ||||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||| | |||||||||||||| |
|
|
| T |
9335834 |
actgtgatggtaaccgaaatatttttgtctttgatctgggtggcggtacttttgatgtgtctatcctcacaattaagggtgatctatttgaagtaaaagc |
9335933 |
T |
|
| Q |
118 |
cacttctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagt |
217 |
Q |
| |
|
||| | |||||||| ||||||||||| ||||||||||||| ||||||||| ||||| ||||| || ||||| ||||||||||||||||||||||| | |
|
|
| T |
9335934 |
caccgcaggaaacacgcaccttggaggcgaggactttgataacagaatggttaactattttgtggaagagttaaaaaagaagaataaagtggacatcaag |
9336033 |
T |
|
| Q |
218 |
ggtaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttat |
317 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||| |||||||||||||| ||| |||||| |
|
|
| T |
9336034 |
cagaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaaaaggatactgtcttttgcttttgttaccactgttgaggtagatgctttat |
9336133 |
T |
|
| Q |
318 |
ttcagggaatagacttctgttcatc |
342 |
Q |
| |
|
|| |||||| ||||| | |||||| |
|
|
| T |
9336134 |
ttatgggaatcgacttttcttcatc |
9336158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 30 - 219
Target Start/End: Complemental strand, 35132661 - 35132472
Alignment:
| Q |
30 |
aacaaaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaa |
129 |
Q |
| |
|
||||||||||||| ||||| |||||||||||||| ||||||||||| || || ||||| || |||| | ||||||| |||| || |||||| | ||||| |
|
|
| T |
35132661 |
aacaaaatatttttgtcttcgatcttggtggtggcacttttgatgtttcaatacttactattaaggataatgtcttccaagttaaggccactgccggaaa |
35132562 |
T |
|
| Q |
130 |
cactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtgg |
219 |
Q |
| |
|
|||||| || || |||||||||||||||| |||||||||||||||||||||| | |||||||| | ||||| ||||| ||||||||||| |
|
|
| T |
35132561 |
cactcatctcggtggagaggactttgataacagaatggtgaactactttgtacaagagttcaagagaaagaacaaagtagacattagtgg |
35132472 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 35 - 279
Target Start/End: Complemental strand, 30775460 - 30775216
Alignment:
| Q |
35 |
aatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactc |
134 |
Q |
| |
|
|||||||| |||||||||||||||||||| ||||||||||||||| | || || || | | |||||| |||||||| ||||| ||| |||||||||||| |
|
|
| T |
30775460 |
aatatttttgtctttgatcttggtggtgggacttttgatgtgtctcttctcaccattagagatgatgtgtttgaagttaaagcaactgctggaaacactc |
30775361 |
T |
|
| Q |
135 |
accttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatcctt |
234 |
Q |
| |
|
|| | || |||||||||||||||| ||||||| |||| |||||||||||||| || || | |||||| || |||||||||| || || |||| | | || |
|
|
| T |
30775360 |
acatcgggggagaggactttgataacagaatgttgaattactttgtagaggaatttaagacgaagaacaacgtggacattaccgggaatccaagagcttt |
30775261 |
T |
|
| Q |
235 |
aaggaggttgagaactgcctgtgagagggcaaagaggacactctc |
279 |
Q |
| |
|
|| |||||||||||| ||||| | |||||| ||||||||||| |
|
|
| T |
30775260 |
gagacagttgagaactgcatgtgaaaaggcaaaaaggacactctc |
30775216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 93; Significance: 3e-45; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 116 - 324
Target Start/End: Complemental strand, 43744943 - 43744735
Alignment:
| Q |
116 |
gccacttctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacatta |
215 |
Q |
| |
|
||||| ||||||||||||||||| ||||||||||| ||||||| || |||||||||||||| | ||||||||| || |||||||| || |||||||||| |
|
|
| T |
43744943 |
gccacctctggaaacactcacctcggaggagaggattttgataataggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacatta |
43744844 |
T |
|
| Q |
216 |
gtggtaacccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattcttt |
315 |
Q |
| |
|
||| ||||||| | | ||||||||||||||||| || || || || ||||| |||||| | ||||||||| ||||||||||| ||||||| |||||||| |
|
|
| T |
43744843 |
ctggaaacccaagagcattaaggaggttgagaacagcatgcgaaagagcaaaaaggacattatcttttgctgttgtcaccactattgaggtagattcttt |
43744744 |
T |
|
| Q |
316 |
atttcaggg |
324 |
Q |
| |
|
|||| |||| |
|
|
| T |
43744743 |
atttgaggg |
43744735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 47 - 276
Target Start/End: Complemental strand, 12528700 - 12528471
Alignment:
| Q |
47 |
tttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagggtgatgtctttgaagtaaaagccacttctggaaacactcaccttggaggag |
146 |
Q |
| |
|
||||| ||||| ||||| ||||||||||||||| | |||||| | ||| | ||||||| ||||| || |||||| | ||| |||||||||||||||||| |
|
|
| T |
12528700 |
tttgaccttggcggtggaacttttgatgtgtctcttcttacagtaaagaataatgtcttcgaagtcaaggccactgccggagacactcaccttggaggag |
12528601 |
T |
|
| Q |
147 |
aggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaacccaaaatccttaaggaggttgag |
246 |
Q |
| |
|
|||||||||||| |||||||||| ||||||| | ||||| || | |||||| ||||| ||||||| ||| ||| ||||| || ||||||| ||||| |
|
|
| T |
12528600 |
aggactttgataatcgaatggtgaatcactttgtgaaagagtttaagaggaagaacaaagttgacattattgggaactcaaaagccctaaggagattgag |
12528501 |
T |
|
| Q |
247 |
aactgcctgtgagagggcaaagaggacact |
276 |
Q |
| |
|
|||| ||| |||| ||| || |||||||| |
|
|
| T |
12528500 |
aactaactgcgagaaggcgaaaaggacact |
12528471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 43745058 - 43744997
Alignment:
| Q |
34 |
aaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagg |
95 |
Q |
| |
|
||||||||| ||||||| || |||||||| ||||||||||||||| |||||||||| |||| |
|
|
| T |
43745058 |
aaatattttcatctttgacctgggtggtgggacttttgatgtgtctctccttacaattaagg |
43744997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 89; Significance: 8e-43; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 123 - 319
Target Start/End: Complemental strand, 28220038 - 28219842
Alignment:
| Q |
123 |
ctggaaacactcaccttggaggagaggactttgatagcagaatggtgaactactttgtagaggagttcaaaaagaagaataaagtggacattagtggtaa |
222 |
Q |
| |
|
|||||||||||||||| || ||||||||||||||||| || |||||||||||||| | ||||||||| || |||||||| || |||||||||| ||| || |
|
|
| T |
28220038 |
ctggaaacactcacctcgggggagaggactttgatagtaggatggtgaactacttcgcagaggagtttaagaagaagaacaaggtggacattactggaaa |
28219939 |
T |
|
| Q |
223 |
cccaaaatccttaaggaggttgagaactgcctgtgagagggcaaagaggacactctcttttgcttttgtcaccactgttgaggtcgattctttattt |
319 |
Q |
| |
|
| ||| | ||||||||||||||||||| || || |||| ||||| |||||||| ||||||||| ||||| |||| ||||||| |||||||||||| |
|
|
| T |
28219938 |
ctcaagagccttaaggaggttgagaacagcgtgcaagagagcaaaaaggacactatcttttgctgttgtcgccaccattgaggtagattctttattt |
28219842 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 95
Target Start/End: Complemental strand, 28220160 - 28220099
Alignment:
| Q |
34 |
aaatattttggtctttgatcttggtggtggtacttttgatgtgtctatccttacaatgaagg |
95 |
Q |
| |
|
||||||||| ||||||| || |||||||| ||||||||||||||| |||||| ||| |||| |
|
|
| T |
28220160 |
aaatattttcatctttgacctgggtggtgggacttttgatgtgtctctccttagaataaagg |
28220099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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