View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20587_high_5 (Length: 529)

Name: NF20587_high_5
Description: NF20587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20587_high_5
NF20587_high_5
[»] chr2 (22 HSPs)
chr2 (9-388)||(44237570-44237946)
chr2 (147-294)||(44226917-44227064)
chr2 (147-294)||(44214760-44214907)
chr2 (426-474)||(43065447-43065495)
chr2 (9-89)||(44214622-44214704)
chr2 (355-474)||(38078336-38078455)
chr2 (426-484)||(10567072-10567130)
chr2 (426-472)||(25796197-25796243)
chr2 (426-474)||(1939329-1939377)
chr2 (426-474)||(34652033-34652081)
chr2 (426-510)||(1647223-1647309)
chr2 (355-474)||(35329744-35329863)
chr2 (427-474)||(40434979-40435026)
chr2 (426-460)||(30538170-30538204)
chr2 (425-479)||(38767365-38767419)
chr2 (426-484)||(41817183-41817241)
chr2 (426-460)||(44606107-44606141)
chr2 (425-474)||(16867764-16867813)
chr2 (426-479)||(28677656-28677709)
chr2 (426-471)||(32821837-32821882)
chr2 (355-471)||(8820218-8820334)
chr2 (426-474)||(29316772-29316820)
[»] chr6 (25 HSPs)
chr6 (389-480)||(2460111-2460202)
chr6 (427-474)||(27909636-27909683)
chr6 (426-480)||(7785741-7785795)
chr6 (389-508)||(9833071-9833191)
chr6 (426-471)||(6536975-6537020)
chr6 (383-480)||(8420151-8420248)
chr6 (426-471)||(9027606-9027651)
chr6 (355-443)||(4325231-4325319)
chr6 (426-474)||(4420668-4420716)
chr6 (426-474)||(34939769-34939817)
chr6 (389-472)||(281808-281891)
chr6 (426-473)||(9667982-9668029)
chr6 (426-480)||(10616538-10616592)
chr6 (426-471)||(2034443-2034488)
chr6 (426-471)||(2167155-2167200)
chr6 (426-471)||(2178788-2178833)
chr6 (439-480)||(20512654-20512695)
chr6 (426-471)||(30863274-30863319)
chr6 (428-469)||(31583709-31583750)
chr6 (389-474)||(32386523-32386608)
chr6 (439-480)||(34404108-34404149)
chr6 (426-474)||(3528828-3528876)
chr6 (428-480)||(4246429-4246481)
chr6 (425-469)||(29296291-29296335)
chr6 (383-443)||(32917253-32917313)
[»] chr4 (19 HSPs)
chr4 (389-480)||(27123312-27123403)
chr4 (427-472)||(46415790-46415835)
chr4 (433-474)||(5131254-5131295)
chr4 (426-471)||(23819117-23819162)
chr4 (431-479)||(9843255-9843303)
chr4 (423-475)||(34398679-34398731)
chr4 (426-472)||(1137739-1137785)
chr4 (355-417)||(7367980-7368042)
chr4 (428-474)||(7694009-7694055)
chr4 (426-480)||(19304945-19304999)
chr4 (426-472)||(29467621-29467667)
chr4 (433-474)||(17884093-17884134)
chr4 (433-474)||(53673662-53673703)
chr4 (440-480)||(2592320-2592360)
chr4 (388-460)||(4691887-4691959)
chr4 (425-461)||(8469373-8469409)
chr4 (426-474)||(43824308-43824356)
chr4 (426-474)||(46401290-46401337)
chr4 (388-460)||(48719350-48719422)
[»] chr1 (35 HSPs)
chr1 (355-472)||(10199334-10199451)
chr1 (426-480)||(27140497-27140551)
chr1 (426-480)||(27963367-27963421)
chr1 (428-474)||(30371173-30371219)
chr1 (387-505)||(47877101-47877222)
chr1 (425-480)||(16981932-16981987)
chr1 (426-484)||(6292508-6292566)
chr1 (426-480)||(12477284-12477338)
chr1 (362-480)||(32515374-32515492)
chr1 (389-462)||(49692012-49692085)
chr1 (425-469)||(4549260-4549304)
chr1 (426-474)||(26184773-26184821)
chr1 (426-474)||(28689449-28689497)
chr1 (426-474)||(35017601-35017649)
chr1 (433-472)||(6659541-6659580)
chr1 (433-472)||(28077073-28077112)
chr1 (425-484)||(30257698-30257757)
chr1 (426-469)||(34380475-34380518)
chr1 (428-471)||(44031998-44032041)
chr1 (391-482)||(44815265-44815356)
chr1 (426-484)||(27887115-27887173)
chr1 (425-471)||(28935872-28935918)
chr1 (426-474)||(4549538-4549587)
chr1 (431-472)||(6279426-6279467)
chr1 (432-469)||(6659710-6659747)
chr1 (432-469)||(39347970-39348007)
chr1 (383-480)||(40485727-40485824)
chr1 (425-485)||(6981506-6981566)
chr1 (425-469)||(7761607-7761651)
chr1 (425-481)||(11695879-11695935)
chr1 (426-474)||(12564496-12564544)
chr1 (426-466)||(15579515-15579555)
chr1 (425-469)||(29007712-29007756)
chr1 (425-457)||(37659910-37659942)
chr1 (426-474)||(46252679-46252727)
[»] chr8 (14 HSPs)
chr8 (426-480)||(11795111-11795165)
chr8 (426-480)||(25869263-25869317)
chr8 (355-471)||(6950350-6950466)
chr8 (383-484)||(21130629-21130728)
chr8 (425-474)||(5088877-5088926)
chr8 (383-460)||(11569411-11569488)
chr8 (427-480)||(28769337-28769390)
chr8 (383-471)||(14949894-14949982)
chr8 (426-469)||(13000421-13000464)
chr8 (426-472)||(41606900-41606946)
chr8 (426-455)||(38421308-38421337)
chr8 (426-474)||(11183570-11183618)
chr8 (426-474)||(20672775-20672823)
chr8 (438-474)||(30918138-30918174)
[»] chr3 (26 HSPs)
chr3 (426-480)||(54180777-54180831)
chr3 (426-474)||(37825147-37825195)
chr3 (426-482)||(43115073-43115129)
chr3 (383-474)||(37273159-37273250)
chr3 (391-469)||(11039301-11039379)
chr3 (431-473)||(21862177-21862219)
chr3 (425-474)||(13709819-13709868)
chr3 (426-471)||(36200124-36200169)
chr3 (426-471)||(45432936-45432981)
chr3 (383-467)||(1810009-1810093)
chr3 (439-479)||(5292530-5292570)
chr3 (383-467)||(20210882-20210966)
chr3 (426-473)||(20192603-20192650)
chr3 (426-472)||(41724238-41724285)
chr3 (426-472)||(3015840-3015886)
chr3 (426-460)||(12923322-12923356)
chr3 (382-472)||(30923852-30923941)
chr3 (426-472)||(31010429-31010475)
chr3 (439-480)||(13371136-13371177)
chr3 (434-475)||(23785279-23785320)
chr3 (355-480)||(24281066-24281191)
chr3 (439-484)||(27792887-27792932)
chr3 (439-480)||(49546494-49546535)
chr3 (428-480)||(41633379-41633431)
chr3 (383-462)||(42530293-42530376)
chr3 (427-455)||(42817220-42817248)
[»] chr7 (22 HSPs)
chr7 (425-474)||(9423590-9423639)
chr7 (427-466)||(33894660-33894699)
chr7 (389-467)||(39345503-39345581)
chr7 (426-480)||(46082055-46082109)
chr7 (429-474)||(24363601-24363646)
chr7 (426-475)||(32329093-32329142)
chr7 (355-474)||(7244705-7244825)
chr7 (426-474)||(35267387-35267435)
chr7 (383-455)||(36537952-36538024)
chr7 (426-470)||(39360052-39360096)
chr7 (425-469)||(44151476-44151520)
chr7 (391-474)||(36598318-36598401)
chr7 (426-480)||(6263361-6263414)
chr7 (426-472)||(12234886-12234932)
chr7 (389-467)||(28727723-28727801)
chr7 (236-274)||(39593656-39593694)
chr7 (426-471)||(4966184-4966229)
chr7 (425-470)||(39334222-39334267)
chr7 (388-472)||(3610699-3610783)
chr7 (428-456)||(6977457-6977485)
chr7 (426-470)||(28521009-28521053)
chr7 (426-474)||(33645958-33646006)
[»] chr5 (17 HSPs)
chr5 (425-476)||(19138713-19138764)
chr5 (427-469)||(35963271-35963313)
chr5 (383-472)||(6109510-6109599)
chr5 (426-474)||(18543194-18543241)
chr5 (427-479)||(37690634-37690686)
chr5 (426-503)||(8177529-8177604)
chr5 (426-472)||(32194076-32194122)
chr5 (425-479)||(32223544-32223597)
chr5 (431-506)||(37968869-37968946)
chr5 (426-471)||(17369436-17369481)
chr5 (439-480)||(20028500-20028541)
chr5 (391-472)||(28586728-28586809)
chr5 (425-474)||(33533535-33533584)
chr5 (426-466)||(1899187-1899227)
chr5 (426-474)||(14331392-14331440)
chr5 (430-474)||(15074750-15074794)
chr5 (426-474)||(40205071-40205119)
[»] scaffold0072 (1 HSPs)
scaffold0072 (426-505)||(4951-5032)
[»] scaffold0020 (1 HSPs)
scaffold0020 (355-471)||(159899-160015)
[»] scaffold0311 (1 HSPs)
scaffold0311 (428-466)||(10616-10654)
[»] scaffold0153 (2 HSPs)
scaffold0153 (427-473)||(6492-6538)
scaffold0153 (427-473)||(13512-13558)
[»] scaffold0147 (1 HSPs)
scaffold0147 (426-472)||(12701-12747)
[»] scaffold0254 (1 HSPs)
scaffold0254 (426-471)||(3501-3546)
[»] scaffold0089 (1 HSPs)
scaffold0089 (439-480)||(33637-33678)
[»] scaffold0044 (1 HSPs)
scaffold0044 (415-451)||(51938-51974)
[»] scaffold0024 (1 HSPs)
scaffold0024 (389-461)||(27614-27686)


Alignment Details
Target: chr2 (Bit Score: 319; Significance: 1e-180; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 9 - 388
Target Start/End: Original strand, 44237570 - 44237946
Alignment:
Q  9 gaagaaaattcaatataccctgaaacaaagaaagatatattttggttacttgtgagacttaaatgcaaaagcaaaacagatcgaagaaagaaaaaacttc 108  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44237570 gaagaaaattcaatacaccctgaaacaaagaaagatatattttggttacttgtgagacttaaatgcaaaagcaaaacagatcgaagaaagaaaaaacttc 44237669  T
Q  109 agtcattttatgaagtactataannnnnnnn--cactccttacctctataacattagtagcagcattgatgaaactaggcaaagctctacttcccacaaa 206  Q
    |||||||||||||||||||||||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44237670 agtcattttatgaagtactataattttttttttcactccttacctctataacattagtagcagcattgatgaaactaggcaaagctctacttcccacaaa 44237769  T
Q  207 cgcttcagcatcaattttcagattgttatatcgaacttcaattgttggaatatcaagtccaactctgtagtaagaaggaaaaacacaacatgatgacatg 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||     
T  44237770 cgcttcagcatcaattttcagattgttatatcgaacttcaattgttggaatatcaagtccaactctgtagtaagaaggaaaaacacaacatg-----att 44237864  T
Q  307 agtaaatgacttatgacataagaaactgattaataagggcatgcttaaattgacttattttagtttatctacatctataaac 388  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44237865 agtaaatgacttatgacataagaaactgattaataagggcatgcttaaattgacttattttagtttatctacatctataaac 44237946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 44226917 - 44227064
Alignment:
Q  147 tacctctataacattagtagcagcattgatgaaactaggcaaagctctacttcccacaaacgcttcagcatcaattttcagattgttatatcgaacttca 246  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| || |  ||||||||||||    
T  44226917 tacctctacaacattagtagcagcattaatgaaactaggcaaagctctacttcccacaaacgcttcagcatcaattttcaggttctggtatcgaacttca 44227016  T
Q  247 attgttggaatatcaagtccaactctgtagtaagaaggaaaaacacaa 294  Q
    |||||||||||||||||||||||||| || | ||||| ||||||||||    
T  44227017 attgttggaatatcaagtccaactctataatgagaagaaaaaacacaa 44227064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 147 - 294
Target Start/End: Original strand, 44214760 - 44214907
Alignment:
Q  147 tacctctataacattagtagcagcattgatgaaactaggcaaagctctacttcccacaaacgcttcagcatcaattttcagattgttatatcgaacttca 246  Q
    |||||| | ||||||||||||||| || ||||||||||||||||||| |||||||||||| ||||| |||||||||||||| || |  ||||||||||||    
T  44214760 tacctcgacaacattagtagcagcgttaatgaaactaggcaaagctcgacttcccacaaaagcttcggcatcaattttcaggttctggtatcgaacttca 44214859  T
Q  247 attgttggaatatcaagtccaactctgtagtaagaaggaaaaacacaa 294  Q
    |||||||||||||||||||||||||| || ||||||| | ||||||||    
T  44214860 attgttggaatatcaagtccaactctataataagaagaagaaacacaa 44214907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 43065447 - 43065495
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||||||||||| |||||||||||| ||||||||||||||||||    
T  43065447 ttatgacatgtccataaattgttttcagcttatttcaataagctctcca 43065495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 44214622 - 44214704
Alignment:
Q  9 gaagaaaattcaatataccctgaaacaaagaaag--atatattttggttacttgtgagacttaaatgcaaaagcaaaacagat 89  Q
    |||||||||| |||| ||||||||||||| ||||  |||||||||  |||||||||||||| || ||||||| ||||||||||    
T  44214622 gaagaaaattgaatacaccctgaaacaaaaaaagatatatattttttttacttgtgagactcaactgcaaaaacaaaacagat 44214704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 355 - 474
Target Start/End: Original strand, 38078336 - 38078455
Alignment:
Q  355 attgacttattttagtttatctacatctataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagc 454  Q
    ||||||||| || ||||||||||| |  |||| |||| |||||||| | ||||||| || ||||||||  || | | ||||| ||||||||||||| |||    
T  38078336 attgacttaattgagtttatctacttaaataagcactggtgagactatctgagagagcttatggaaatagttaaaggcatgttcataagttgttttgagc 38078435  T
Q  455 taatttcaataagctctcca 474  Q
    | ||||  ||||||||||||    
T  38078436 tcatttacataagctctcca 38078455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 484
Target Start/End: Complemental strand, 10567130 - 10567072
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatagttta 484  Q
    ||||||||||  |||||||||||||||||||||||  | |||||||||| |||||||||    
T  10567130 ttatgacatgatcataagttgttttcagctaattttcacaagctctccagaatagttta 10567072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 472
Target Start/End: Original strand, 25796197 - 25796243
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    |||| |||| |||||||||||||||||||| ||||||||||||||||    
T  25796197 ttattacatatccataagttgttttcagcttatttcaataagctctc 25796243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 1939329 - 1939377
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||||||||||| |||||||| || ||||| ||||||||||||    
T  1939329 ttatgacatgtccataagctgttttcaacttatttccataagctctcca 1939377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 34652033 - 34652081
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||||||||||| |||||||| || ||||| ||||||||||||    
T  34652033 ttatgacatgtccataagctgttttcaacttatttccataagctctcca 34652081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 510
Target Start/End: Complemental strand, 1647309 - 1647223
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag--tttagcttatatgaaaacagtttgacttaa 510  Q
    ||||||||||  |||||| ||||||||||| ||||| |||||||||| |||||||  | ||| ||| |  |||||||||||||||||    
T  1647309 ttatgacatgctcataagctgttttcagcttatttccataagctctctataatagcttatagattaaacaaaaacagtttgacttaa 1647223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 474
Target Start/End: Original strand, 35329744 - 35329863
Alignment:
Q  355 attgacttattttagtttatctacatctataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagc 454  Q
    |||||||||| | || ||||||||  | ||||||||| |||||| |  ||| |||| || |||||||   || |||||||| || |||||||||| ||||    
T  35329744 attgacttatgtgagcttatctactaccataaacactagtgagattacttgtgagatcttatggaaacagttaatgacatgcccctaagttgtttccagc 35329843  T
Q  455 taatttcaataagctctcca 474  Q
    | ||||| ||||||||||||    
T  35329844 ttatttccataagctctcca 35329863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 474
Target Start/End: Original strand, 40434979 - 40435026
Alignment:
Q  427 tatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||||||||||| | |||| || ||||||||||||||||||||    
T  40434979 tatgacatgtccataagctattttaagataatttcaataagctctcca 40435026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 460
Target Start/End: Original strand, 30538170 - 30538204
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaattt 460  Q
    |||||||||||||||||||||||||||||| ||||    
T  30538170 ttatgacatgtccataagttgttttcagcttattt 30538204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 479
Target Start/End: Original strand, 38767365 - 38767419
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagctctccataata 479  Q
    |||||||||| |||| |||||||||   ||| |||||||||||||||||||||||    
T  38767365 tttatgacatatccacaagttgtttctcgcttatttcaataagctctccataata 38767419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 484
Target Start/End: Complemental strand, 41817241 - 41817183
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatagttta 484  Q
    |||||||||||  |||| |||||||||||| ||||| ||||||||||||  ||||||||    
T  41817241 ttatgacatgttgataatttgttttcagcttatttccataagctctccaggatagttta 41817183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 460
Target Start/End: Original strand, 44606107 - 44606141
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaattt 460  Q
    |||||||||||||||||||||||||||||| ||||    
T  44606107 ttatgacatgtccataagttgttttcagctgattt 44606141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 474
Target Start/End: Complemental strand, 16867813 - 16867764
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||| | ||||||||||||||| || ||||| ||||||||||||    
T  16867813 tttatgacatattcataagttgttttcaacttatttccataagctctcca 16867764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 479
Target Start/End: Original strand, 28677656 - 28677709
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataata 479  Q
    ||||||||| | |||||||||||||| ||| ||||| |||||||||||| ||||    
T  28677656 ttatgacattttcataagttgttttcggcttatttccataagctctccaaaata 28677709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 471
Target Start/End: Complemental strand, 32821882 - 32821837
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    |||||||||||||||||| ||||||||| | ||||| |||||||||    
T  32821882 ttatgacatgtccataagctgttttcagtttatttctataagctct 32821837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 355 - 471
Target Start/End: Original strand, 8820218 - 8820334
Alignment:
Q  355 attgacttattttagtttatctacatctataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagc 454  Q
    |||||||||||| ||| |||||||   ||||| |||||  ||||||  || |||||||| |||||||    || |||||||| || ||| ||||||||||    
T  8820218 attgacttatttgagtatatctactaatataagcactttcgagactgcttaagagaccttatggaaacagcttctgacatgttcacaagctgttttcagc 8820317  T
Q  455 taatttcaataagctct 471  Q
    | ||||| |||||||||    
T  8820318 ttatttccataagctct 8820334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 29316772 - 29316820
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||||| |||||||| ||||||||| ||||| ||||| ||||||    
T  29316772 ttatgacatgttcataagttcttttcagcttatttccataagttctcca 29316820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 44; Significance: 8e-16; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 389 - 480
Target Start/End: Original strand, 2460111 - 2460202
Alignment:
Q  389 acttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||||||||||| ||||||||| || |||||||    ||||||||||||  ||||||||||||| || ||||| ||||||||||||||||||    
T  2460111 acttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctccataatag 2460202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 427 - 474
Target Start/End: Original strand, 27909636 - 27909683
Alignment:
Q  427 tatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||    
T  27909636 tatgacatgtccataagttgttttcagcttatttccataagctctcca 27909683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 426 - 480
Target Start/End: Original strand, 7785741 - 7785795
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||||||||||| ||||||||||||||||| ||||| |||||||||||| |||||    
T  7785741 ttatgacatgtctataagttgttttcagcttatttccataagctctccaaaatag 7785795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 508
Target Start/End: Original strand, 9833071 - 9833191
Alignment:
Q  389 acttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagctctccataatagttta--gc 486  Q
    |||| ||||||| ||||||||| || |||||||  | | ||| ||||||||||| || |||||| || ||||| ||||||||| ||| |||| |||  ||    
T  9833071 acttatgagactatttgagagatcttatggaaaaacat-atggcatgtccataaattattttcaacttatttccataagctcttcatgatagcttattgc 9833169  T
Q  487 ttatatgaaaacagtttgactt 508  Q
    ||||| ||||||||||||||||    
T  9833170 ttataagaaaacagtttgactt 9833191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 426 - 471
Target Start/End: Complemental strand, 6537020 - 6536975
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||    
T  6537020 ttatgacatgttcataagttgttttcagcttatttccataagctct 6536975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 480
Target Start/End: Original strand, 8420151 - 8420248
Alignment:
Q  383 ataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||||||||||||||||| || | |||| || || |||||   |||||||||||||| ||| | |||||| || ||||| ||||||||||||| ||||    
T  8420151 ataaacacttgtgagactgttagtgagagcttatagaaatagcttatgacatgtccacaagctattttcaacttatttccataagctctccattatag 8420248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 426 - 471
Target Start/End: Complemental strand, 9027651 - 9027606
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    |||||||||||||||||||||||||||||| ||||  |||||||||    
T  9027651 ttatgacatgtccataagttgttttcagcttattttcataagctct 9027606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 443
Target Start/End: Original strand, 4325231 - 4325319
Alignment:
Q  355 attgacttattttagtttatctacatctataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataag 443  Q
    ||||||| ||||||||||||||||    |||||||||||||||||| |||| || | || | ||||||  ||||| |||||||||||||    
T  4325231 attgactaattttagtttatctactaacataaacacttgtgagactatttgtgacagcttagggaaatagtttatcacatgtccataag 4325319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 474
Target Start/End: Complemental strand, 4420716 - 4420668
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||||| |||||| ||||||||||| ||||| ||||||||||||    
T  4420716 ttatgacatgttcataagctgttttcagcttatttccataagctctcca 4420668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 474
Target Start/End: Complemental strand, 34939817 - 34939769
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||||||||||| |||||||||||| ||||| |||| |||||||    
T  34939817 ttatgacatgtccataaattgttttcagcttatttccataaactctcca 34939769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 472
Target Start/End: Original strand, 281808 - 281891
Alignment:
Q  389 acttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    |||||||||||| |||| |||| || ||||||     |||||||||||| ||||||||||||||||| ||||| || |||||||    
T  281808 acttgtgagactgtttgggagagctaatggaagcaacttatgacatgtctataagttgttttcagcttatttccatgagctctc 281891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 473
Target Start/End: Original strand, 9667982 - 9668029
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcc 473  Q
    |||||||||||||||||| |||||||| || ||||| |||||||||||    
T  9667982 ttatgacatgtccataagctgttttcaacttatttccataagctctcc 9668029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 480
Target Start/End: Original strand, 10616538 - 10616592
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    ||||||||||||| |||||||| ||||||| ||||  |||||||||||| |||||    
T  10616538 ttatgacatgtccgtaagttgtgttcagcttatttttataagctctccaaaatag 10616592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 471
Target Start/End: Original strand, 2034443 - 2034488
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    ||||||||| |||||||| ||||||||||| |||||| ||||||||    
T  2034443 ttatgacatttccataagctgttttcagcttatttcattaagctct 2034488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 471
Target Start/End: Original strand, 2167155 - 2167200
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    |||||| ||||||||||||||||||||||| ||||| |||| ||||    
T  2167155 ttatgatatgtccataagttgttttcagcttatttccataatctct 2167200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 471
Target Start/End: Original strand, 2178788 - 2178833
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    |||||| ||||||||||||||||||||||| ||||| |||| ||||    
T  2178788 ttatgatatgtccataagttgttttcagcttatttccataatctct 2178833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 480
Target Start/End: Original strand, 20512654 - 20512695
Alignment:
Q  439 ataagttgttttcagctaatttcaataagctctccataatag 480  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||    
T  20512654 ataagttgttttcagcttatttccataagctcttcataatag 20512695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 471
Target Start/End: Complemental strand, 30863319 - 30863274
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    ||||||||||| |||||||||||||||||| | ||| |||||||||    
T  30863319 ttatgacatgtacataagttgttttcagcttacttctataagctct 30863274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 428 - 469
Target Start/End: Complemental strand, 31583750 - 31583709
Alignment:
Q  428 atgacatgtccataagttgttttcagctaatttcaataagct 469  Q
    ||||||||||||||||||||||||| || ||||| |||||||    
T  31583750 atgacatgtccataagttgttttcaacttatttccataagct 31583709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 389 - 474
Target Start/End: Original strand, 32386523 - 32386608
Alignment:
Q  389 acttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||||  ||||| ||| || ||||||||   |||| ||||||||| || |||||||||||| ||||  ||||||||||||    
T  32386523 acttgtgagaccgtttgaaagagcttatggaaatatcttataacatgtccacaacttgttttcagcttattttcataagctctcca 32386608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 480
Target Start/End: Complemental strand, 34404149 - 34404108
Alignment:
Q  439 ataagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||||||||||||| || ||||| ||||||||||||||||||    
T  34404149 ataagttgttttcaacttatttctataagctctccataatag 34404108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 474
Target Start/End: Complemental strand, 3528876 - 3528828
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||||||||||| ||||||||| || ||||  ||||||||||||    
T  3528876 ttatgacatgtccataacttgttttcatcttattttcataagctctcca 3528828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 480
Target Start/End: Complemental strand, 4246481 - 4246429
Alignment:
Q  428 atgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||||||||||||||| |||||||| || ||||  ||| ||||||||||||||    
T  4246481 atgacatgtccataagctgttttcaacttatttttatatgctctccataatag 4246429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 469
Target Start/End: Original strand, 29296291 - 29296335
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagct 469  Q
    ||||||||||||||||||||| ||||||||| ||||  |||||||    
T  29296291 tttatgacatgtccataagttattttcagcttattttcataagct 29296335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 443
Target Start/End: Complemental strand, 32917313 - 32917253
Alignment:
Q  383 ataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataag 443  Q
    |||||||||||||||||| |||| |||| || |||||||    ||||||||||||||||||    
T  32917313 ataaacacttgtgagactgtttgggagagcttatggaaacaacttatgacatgtccataag 32917253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 8e-16; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 389 - 480
Target Start/End: Original strand, 27123312 - 27123403
Alignment:
Q  389 acttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||||||||||| ||||||||| || |||||||    ||||||||||||  ||||||||||||| || ||||| ||||||||||||||||||    
T  27123312 acttgtgagactgtttgagagagcttatggaaacaacttatgacatgtctttaagttgttttcaacttatttccataagctctccataatag 27123403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 427 - 472
Target Start/End: Original strand, 46415790 - 46415835
Alignment:
Q  427 tatgacatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    |||||||||||||||||||||||||||||||||| | |||||||||    
T  46415790 tatgacatgtccataagttgttttcagctaattttactaagctctc 46415835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 433 - 474
Target Start/End: Original strand, 5131254 - 5131295
Alignment:
Q  433 atgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  5131254 atgtccataagttgttttcagcttatttccataagctctcca 5131295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 426 - 471
Target Start/End: Complemental strand, 23819162 - 23819117
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    ||||||||||||||||||||||||||| || ||||| |||||||||    
T  23819162 ttatgacatgtccataagttgttttcatcttatttctataagctct 23819117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 431 - 479
Target Start/End: Original strand, 9843255 - 9843303
Alignment:
Q  431 acatgtccataagttgttttcagctaatttcaataagctctccataata 479  Q
    |||| |||||||||||||||||||| ||||||  |||||||||||||||    
T  9843255 acatatccataagttgttttcagcttatttcatcaagctctccataata 9843303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 423 - 475
Target Start/End: Original strand, 34398679 - 34398731
Alignment:
Q  423 gctttatgacatgtccataagttgttttcagctaatttcaataagctctccat 475  Q
    ||||||||||||| ||||||||||||||| ||| | ||| |||||||||||||    
T  34398679 gctttatgacatgcccataagttgttttcggcttacttccataagctctccat 34398731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 472
Target Start/End: Complemental strand, 1137785 - 1137739
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    ||||||||||| |||||||||||||||| | ||||| ||||||||||    
T  1137785 ttatgacatgttcataagttgttttcagtttatttccataagctctc 1137739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 355 - 417
Target Start/End: Original strand, 7367980 - 7368042
Alignment:
Q  355 attgacttattttagtttatctacatctataaacacttgtgagactttttgagagacctcatg 417  Q
    |||||||||||| ||||||||||||   |||||| ||||||||||| |||| |||| ||||||    
T  7367980 attgacttatttgagtttatctacaggcataaacgcttgtgagactgtttgggagagctcatg 7368042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 474
Target Start/End: Original strand, 7694009 - 7694055
Alignment:
Q  428 atgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||| |||||||||||||||||| ||||| |||| |||||||    
T  7694009 atgacatgttcataagttgttttcagcttatttccataaactctcca 7694055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 480
Target Start/End: Complemental strand, 19304999 - 19304945
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    ||||||||||||||||||||||||||||||  |||| || | ||||||| |||||    
T  19304999 ttatgacatgtccataagttgttttcagcttgtttccattaactctccaaaatag 19304945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 472
Target Start/End: Original strand, 29467621 - 29467667
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    |||||||||||||||||| ||||||||||| ||||| |||| |||||    
T  29467621 ttatgacatgtccataagctgttttcagcttatttccataaactctc 29467667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 474
Target Start/End: Complemental strand, 17884134 - 17884093
Alignment:
Q  433 atgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||| |||||||||||||||||||||||  ||||||||||||    
T  17884134 atgttcataagttgttttcagctaattttcataagctctcca 17884093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 433 - 474
Target Start/End: Original strand, 53673662 - 53673703
Alignment:
Q  433 atgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||||||||||||||||| ||||  ||||||||||||    
T  53673662 atgtccataagttgttttcagcttatttacataagctctcca 53673703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 440 - 480
Target Start/End: Original strand, 2592320 - 2592360
Alignment:
Q  440 taagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||||||||||||||| ||||| |||||||||||| |||||    
T  2592320 taagttgttttcagcttatttccataagctctccaaaatag 2592360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 460
Target Start/End: Complemental strand, 4691959 - 4691887
Alignment:
Q  388 cacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaattt 460  Q
    ||||||||||||| ||||||| | || |||||||    |||||||||| ||||| ||||||||||||| ||||    
T  4691959 cacttgtgagactatttgagaaaacttatggaaacaacttatgacatgcccatatgttgttttcagcttattt 4691887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 461
Target Start/End: Original strand, 8469373 - 8469409
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttc 461  Q
    |||||||||||| |||||||||||||||||| |||||    
T  8469373 tttatgacatgttcataagttgttttcagcttatttc 8469409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 474
Target Start/End: Complemental strand, 43824356 - 43824308
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||| ||||| |||||||||||||||||| ||||| ||||||| ||||    
T  43824356 ttatggcatgttcataagttgttttcagcttatttccataagctttcca 43824308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 474
Target Start/End: Complemental strand, 46401337 - 46401290
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||||| |||||||||| ||||||| |||| |||||||||||||    
T  46401337 ttatgacatgttcataagttgtattcagcttattt-aataagctctcca 46401290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 460
Target Start/End: Original strand, 48719350 - 48719422
Alignment:
Q  388 cacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaattt 460  Q
    ||||||||||| | |||||| || || ||| ||||| |||||||||||| | |||| ||||||||||| ||||    
T  48719350 cacttgtgagattgtttgagggaacttatgaaaatggtttatgacatgttcgtaagctgttttcagcttattt 48719422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 472
Target Start/End: Original strand, 10199334 - 10199451
Alignment:
Q  355 attgacttattttagtttatctacatctataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagc 454  Q
    |||||||||||| || ||||||||    |||| ||||||||| ||| |||| |||| |||||| ||||   ||||||||||| |||||||||||||||||    
T  10199334 attgacttatttgagcttatctactaacataagcacttgtgacactatttgggagaactcatgaaaatagcttatgacatgttcataagttgttttcagc 10199433  T
Q  455 taatttcaataagctctc 472  Q
    | ||||  ||||||||||    
T  10199434 ttattttcataagctctc 10199451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 426 - 480
Target Start/End: Complemental strand, 27140551 - 27140497
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||    
T  27140551 ttatgacatgtccataagttgttttcagcttatttgcataagctctccatgatag 27140497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 426 - 480
Target Start/End: Original strand, 27963367 - 27963421
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    ||||||||||||||||||||||||| |||| ||||  ||||||||||||||||||    
T  27963367 ttatgacatgtccataagttgtttttagcttatttatataagctctccataatag 27963421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 428 - 474
Target Start/End: Complemental strand, 30371219 - 30371173
Alignment:
Q  428 atgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||    
T  30371219 atgacatgtccataagttgttttcagcttatttcaatacgctctcca 30371173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 387 - 505
Target Start/End: Complemental strand, 47877222 - 47877101
Alignment:
Q  387 acacttgtgagactttttgagagacctcatggaaatgc-tttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag--ttt 483  Q
    |||||||||||| |||||||| || |  ||| |||| | |||||||||||  |||||||||||||||||| ||||  ||||||| ||||||||||  | |    
T  47877222 acacttgtgagagtttttgagggagcgtatgaaaatacctttatgacatgctcataagttgttttcagcttattttcataagctttccataatagcttat 47877123  T
Q  484 agcttatatgaaaacagtttga 505  Q
    || ||||||||||||| |||||    
T  47877122 agtttatatgaaaacaatttga 47877101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 425 - 480
Target Start/End: Original strand, 16981932 - 16981987
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||||||||||||||||||||||||| |||| ||||  ||||||||||||| ||||    
T  16981932 tttatgacatgtccataagttgtttttagcttatttatataagctctccatgatag 16981987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 484
Target Start/End: Complemental strand, 6292566 - 6292508
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatagttta 484  Q
    ||||||||||| |||||| ||||||||||| ||||  |||||||||||| |||||||||    
T  6292566 ttatgacatgttcataagctgttttcagcttattttcataagctctccaaaatagttta 6292508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 480
Target Start/End: Original strand, 12477284 - 12477338
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||||||||||||||||||||||||||||| ||||| |||  |||||||| ||||    
T  12477284 ttatgacatgtccataagttgttttcagcttatttccatacactctccatgatag 12477338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 362 - 480
Target Start/End: Original strand, 32515374 - 32515492
Alignment:
Q  362 tattttagtttatctacatctataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttc 461  Q
    ||||| |||||||||||    |||| ||||||||||||| |||| |||| || |||||||     ||||||||||| |||||||||||||| || || ||    
T  32515374 tatttgagtttatctactaacataagcacttgtgagactgtttgggagagcttatggaaacagcgtatgacatgtcaataagttgttttcaacttatatc 32515473  T
Q  462 aataagctctccataatag 480  Q
     ||||||||||||| ||||    
T  32515474 tataagctctccatgatag 32515492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 389 - 462
Target Start/End: Original strand, 49692012 - 49692085
Alignment:
Q  389 acttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttca 462  Q
    |||||||||||| ||||||||| || ||| ||||   ||||||||||||||||  ||||||||||||| |||||    
T  49692012 acttgtgagactgtttgagagaacttatgaaaatagcttatgacatgtccatagtttgttttcagctattttca 49692085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 469
Target Start/End: Complemental strand, 4549304 - 4549260
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagct 469  Q
    ||||||||||||| ||||||||||||||||| ||||| |||||||    
T  4549304 tttatgacatgtctataagttgttttcagcttatttccataagct 4549260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 474
Target Start/End: Complemental strand, 26184821 - 26184773
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||||||||||| ||||||||| | ||||| ||||||||||||    
T  26184821 ttatgacatgtccataagctgttttcagattatttccataagctctcca 26184773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 28689449 - 28689497
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||||||||||||||||||||||| ||||  ||||||| ||||    
T  28689449 ttatgacatgtccataagttgttttcagcttattttcataagctttcca 28689497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 474
Target Start/End: Complemental strand, 35017649 - 35017601
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||||||||||||| |||||| || ||||| ||||||||||||    
T  35017649 ttatgacatgtccataagttattttcaacttatttccataagctctcca 35017601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 472
Target Start/End: Complemental strand, 6659580 - 6659541
Alignment:
Q  433 atgtccataagttgttttcagctaatttcaataagctctc 472  Q
    ||||||||||||||||||||||| ||||| ||||||||||    
T  6659580 atgtccataagttgttttcagcttatttcgataagctctc 6659541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 472
Target Start/End: Original strand, 28077073 - 28077112
Alignment:
Q  433 atgtccataagttgttttcagctaatttcaataagctctc 472  Q
    |||| |||||||||||||||||| ||||||||||||||||    
T  28077073 atgttcataagttgttttcagcttatttcaataagctctc 28077112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 484
Target Start/End: Complemental strand, 30257757 - 30257698
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagctctccataatagttta 484  Q
    |||||||||||| |||||| ||||||||||| ||||| |||||| |||||  ||||||||    
T  30257757 tttatgacatgttcataagctgttttcagcttatttctataagccctccaggatagttta 30257698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 469
Target Start/End: Complemental strand, 34380518 - 34380475
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagct 469  Q
    ||||||||| |||||||| ||||||||||| |||||||||||||    
T  34380518 ttatgacatttccataagctgttttcagcttatttcaataagct 34380475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 428 - 471
Target Start/End: Original strand, 44031998 - 44032041
Alignment:
Q  428 atgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    |||||||||||||||| | ||||||||||||||| |||||||||    
T  44031998 atgacatgtccataagctattttcagctaatttccataagctct 44032041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 482
Target Start/End: Original strand, 44815265 - 44815356
Alignment:
Q  391 ttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagctctccataatagtt 482  Q
    |||||||||||| ||  ||| ||||||||| |   |||||| ||||  |||| |||||||||||| ||||| |||||||||||| |||||||    
T  44815265 ttgtgagactttgtggaagaactcatggaactagcttatgatatgtgtataaattgttttcagcttatttccataagctctccaaaatagtt 44815356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 484
Target Start/End: Original strand, 27887115 - 27887173
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatagttta 484  Q
    ||||||||||||||||| ||||||| |||| ||||  ||| ||||||||| ||||||||    
T  27887115 ttatgacatgtccataaattgtttttagcttatttttatatgctctccatgatagttta 27887173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 471
Target Start/End: Original strand, 28935872 - 28935918
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    ||||||||||||||||||||| |||| |||| ||||| |||||||||    
T  28935872 tttatgacatgtccataagttttttttagcttatttccataagctct 28935918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 4549538 - 4549587
Alignment:
Q  426 ttatgacatgtccataa-gttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||||| |||| |||||||||| | |||||||||||||||||||    
T  4549538 ttatgacatgtctataaagttgttttcaacaaatttcaataagctctcca 4549587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 472
Target Start/End: Complemental strand, 6279467 - 6279426
Alignment:
Q  431 acatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    ||||||||||||||||||||||||  ||||| ||||||||||    
T  6279467 acatgtccataagttgttttcagcgtatttccataagctctc 6279426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 469
Target Start/End: Complemental strand, 6659747 - 6659710
Alignment:
Q  432 catgtccataagttgttttcagctaatttcaataagct 469  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  6659747 catgtccataagttgttttcagctcattttaataagct 6659710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 469
Target Start/End: Original strand, 39347970 - 39348007
Alignment:
Q  432 catgtccataagttgttttcagctaatttcaataagct 469  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  39347970 catgtccataagttgttttcagcttatttccataagct 39348007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 383 - 480
Target Start/End: Original strand, 40485727 - 40485824
Alignment:
Q  383 ataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||| ||||||||||||| |||| |||| || || ||||    ||||||||||| || || ||| |||||||||| ||| |||||||||||| |||||    
T  40485727 ataagcacttgtgagactgtttgggagaacttattgaaacatcttatgacatgtgcagaatttgctttcagctaacttccataagctctccaaaatag 40485824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 485
Target Start/End: Complemental strand, 6981566 - 6981506
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagctctccataatagtttag 485  Q
    |||||| |||||| ||||||||||||||||  ||||| |||| ||||||| ||||| ||||    
T  6981566 tttatgtcatgtcaataagttgttttcagcatatttccataaactctccagaatagcttag 6981506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 469
Target Start/End: Original strand, 7761607 - 7761651
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagct 469  Q
    ||||||||||||||||||||| ||||||||| ||||  |||||||    
T  7761607 tttatgacatgtccataagtttttttcagcttattttgataagct 7761651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 481
Target Start/End: Complemental strand, 11695935 - 11695879
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagctctccataatagt 481  Q
    ||||||||||||||||||| |||||||| || ||||  ||||||| |||| ||||||    
T  11695935 tttatgacatgtccataagctgttttcaacttattttcataagctttccagaatagt 11695879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 12564496 - 12564544
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||| ||| ||||||||||||||||| ||||| ||||| ||||||    
T  12564496 ttatgacaagtcaataagttgttttcagcttatttccataagttctcca 12564544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 466
Target Start/End: Complemental strand, 15579555 - 15579515
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataa 466  Q
    ||||||||||||||||||||||| |||||| ||||| ||||    
T  15579555 ttatgacatgtccataagttgttctcagcttatttccataa 15579515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 469
Target Start/End: Original strand, 29007712 - 29007756
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagct 469  Q
    ||||||| |||| |||||||||||||||||| ||||| |||||||    
T  29007712 tttatgatatgttcataagttgttttcagcttatttcgataagct 29007756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 425 - 457
Target Start/End: Original strand, 37659910 - 37659942
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaa 457  Q
    |||||||||||||||| ||||||||||||||||    
T  37659910 tttatgacatgtccattagttgttttcagctaa 37659942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 46252679 - 46252727
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||||| |||||||||||||||| | ||||  ||||||||||||    
T  46252679 ttatgacatgttcataagttgttttcaggttattttcataagctctcca 46252727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 426 - 480
Target Start/End: Complemental strand, 11795165 - 11795111
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||||||||||||||||  ||||||||||| ||||| ||||||||||||||||||    
T  11795165 ttatgacatgtccataacctgttttcagcttatttccataagctctccataatag 11795111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 426 - 480
Target Start/End: Original strand, 25869263 - 25869317
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||||||||||||||||||||||||||||| ||||| |||| |||||||| ||||    
T  25869263 ttatgacatgtccataagttgttttcagcttatttccataaactctccatgatag 25869317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 355 - 471
Target Start/End: Complemental strand, 6950466 - 6950350
Alignment:
Q  355 attgacttattttagtttatctacatctataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagc 454  Q
    |||||||||||| |||||||||||    ||||||| |||||||| | |||| |||| || ||| |||     ||||||||||| ||||||||||||||||    
T  6950466 attgacttatttgagtttatctactggcataaacatttgtgagattgtttgggagagcttatgtaaacaacctatgacatgtcgataagttgttttcagc 6950367  T
Q  455 taatttcaataagctct 471  Q
    | ||||| |||||||||    
T  6950366 ttatttccataagctct 6950350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 484
Target Start/End: Complemental strand, 21130728 - 21130629
Alignment:
Q  383 ataaacacttgtgagactttttgagagacctcatggaaat-gctttatgacatgtccataagttgttttcagctaatttcaataagctctccataatagt 481  Q
    ||||| |||||||||||| ||||||||| || |||||||| ||||| ||||||||||||  | |||||| |||| ||||| |||||||||| || |||||    
T  21130728 ataaatacttgtgagactgtttgagagagcttatggaaatagcttt-tgacatgtccat--gctgttttgagcttatttccataagctctcaatgatagt 21130632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 425 - 474
Target Start/End: Complemental strand, 5088926 - 5088877
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||| ||||||||||||| |||||||| || ||||||||||||||||||    
T  5088926 tttataacatgtccataagctgttttcaacttatttcaataagctctcca 5088877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 460
Target Start/End: Original strand, 11569411 - 11569488
Alignment:
Q  383 ataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaattt 460  Q
    |||| ||||||||||||| ||| ||||| || |||||||    ||||||||||| |||||||||||||||||| ||||    
T  11569411 ataaccacttgtgagactgtttaagagagcttatggaaacagcttatgacatgtacataagttgttttcagcttattt 11569488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 427 - 480
Target Start/End: Original strand, 28769337 - 28769390
Alignment:
Q  427 tatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    ||||| ||||||||||||||||||||||| ||||| |||| ||||||| |||||    
T  28769337 tatgatatgtccataagttgttttcagcttatttccataaactctccaaaatag 28769390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 471
Target Start/End: Complemental strand, 14949982 - 14949894
Alignment:
Q  383 ataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    ||||||| |||||||||| |||  |||| || ||| ||||   |||||||||||||||||| ||||||||||| ||||| |||| ||||    
T  14949982 ataaacatttgtgagactgtttaggagagcttatgaaaataacttatgacatgtccataagctgttttcagcttatttctataatctct 14949894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 469
Target Start/End: Original strand, 13000421 - 13000464
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagct 469  Q
    |||||||||||||| ||||||||||||||| ||||| |||||||    
T  13000421 ttatgacatgtccacaagttgttttcagcttatttccataagct 13000464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 472
Target Start/End: Original strand, 41606900 - 41606946
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    ||||||||||| || ||||||||||||||| ||||| ||||||||||    
T  41606900 ttatgacatgttcaaaagttgttttcagcttatttccataagctctc 41606946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 455
Target Start/End: Complemental strand, 38421337 - 38421308
Alignment:
Q  426 ttatgacatgtccataagttgttttcagct 455  Q
    ||||||||||||||||||||||||||||||    
T  38421337 ttatgacatgtccataagttgttttcagct 38421308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 474
Target Start/End: Complemental strand, 11183618 - 11183570
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||| ||||| ||||| ||||||||||| ||||| ||||||||||||    
T  11183618 ttatgatatgtctataagctgttttcagcttatttccataagctctcca 11183570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 474
Target Start/End: Complemental strand, 20672823 - 20672775
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||||| |||||| ||||||||||| ||||  ||||||||||||    
T  20672823 ttatgacatgttcataagctgttttcagcttattttcataagctctcca 20672775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 438 - 474
Target Start/End: Complemental strand, 30918174 - 30918138
Alignment:
Q  438 cataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||||||||||| ||||| ||||||||||||    
T  30918174 cataagttgttttcagcttatttccataagctctcca 30918138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 426 - 480
Target Start/End: Original strand, 54180777 - 54180831
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    ||||||||||||||||||||||||| |||| ||||  ||||||||||||||||||    
T  54180777 ttatgacatgtccataagttgtttttagcttatttatataagctctccataatag 54180831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 474
Target Start/End: Complemental strand, 37825195 - 37825147
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  37825195 ttatgacatgtccataagttgttttcaggttatttccataagctctcca 37825147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 426 - 482
Target Start/End: Complemental strand, 43115129 - 43115073
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatagtt 482  Q
    ||||||||||||||||| |||||||||||| ||||| |||||||||| || ||||||    
T  43115129 ttatgacatgtccataacttgttttcagcttatttccataagctctcaatgatagtt 43115073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 383 - 474
Target Start/End: Complemental strand, 37273250 - 37273159
Alignment:
Q  383 ataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||| |||| |||||||| |||| |||| || |||||||    ||||||||||||||||||||||||||| || ||||| ||||| ||||||    
T  37273250 ataagcactggtgagactgtttgggagagcttatggaaacaacttatgacatgtccataagttgttttcaacttatttccataagttctcca 37273159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 469
Target Start/End: Original strand, 11039301 - 11039379
Alignment:
Q  391 ttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagct 469  Q
    |||||||||| ||||| ||| || |||||||    |||||||||||||||||||||||||||||| || || |||||||    
T  11039301 ttgtgagactgtttgaaagagcttatggaaacatattatgacatgtccataagttgttttcagcttatctccataagct 11039379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 473
Target Start/End: Original strand, 21862177 - 21862219
Alignment:
Q  431 acatgtccataagttgttttcagctaatttcaataagctctcc 473  Q
    ||||||||||||||||||||||||| ||||| |||||||||||    
T  21862177 acatgtccataagttgttttcagcttatttccataagctctcc 21862219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 425 - 474
Target Start/End: Original strand, 13709819 - 13709868
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||| ||||||||||||||||||| | |||||||||| |||||||    
T  13709819 tttatgacaagtccataagttgttttcagtttatttcaataaactctcca 13709868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 426 - 471
Target Start/End: Complemental strand, 36200169 - 36200124
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    |||||||||||||||||||||||||||||| ||||| || ||||||    
T  36200169 ttatgacatgtccataagttgttttcagcttatttccatgagctct 36200124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 426 - 471
Target Start/End: Original strand, 45432936 - 45432981
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    ||||||||||| |||||||||||||||||| ||||| |||||||||    
T  45432936 ttatgacatgttcataagttgttttcagcttatttccataagctct 45432981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 467
Target Start/End: Complemental strand, 1810093 - 1810009
Alignment:
Q  383 ataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataag 467  Q
    |||| ||||||||||||| ||||||||| || | |||||    ||||||||||||||| |||||||||| ||| ||||| |||||    
T  1810093 ataatcacttgtgagactatttgagagagcttacggaaacaacttatgacatgtccatgagttgttttctgcttatttctataag 1810009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 439 - 479
Target Start/End: Original strand, 5292530 - 5292570
Alignment:
Q  439 ataagttgttttcagctaatttcaataagctctccataata 479  Q
    ||||||||||||||||| ||||| |||||||||||||||||    
T  5292530 ataagttgttttcagcttatttccataagctctccataata 5292570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 467
Target Start/End: Original strand, 20210882 - 20210966
Alignment:
Q  383 ataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataag 467  Q
    |||| ||||||||||||| ||||||||| || ||| ||| |  |||||| ||||| || |||||||||||||| ||||| |||||    
T  20210882 ataaccacttgtgagactgtttgagagatcttatgcaaacggattatgatatgtctatgagttgttttcagcttatttctataag 20210966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 473
Target Start/End: Original strand, 20192603 - 20192650
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcc 473  Q
    |||||||||||||||||| |||||||| || ||||| |||||||||||    
T  20192603 ttatgacatgtccataagctgttttcaactcatttccataagctctcc 20192650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 472
Target Start/End: Complemental strand, 41724285 - 41724238
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttca-ataagctctc 472  Q
    |||||||||||||||||||||||||||||| |||| | ||||||||||    
T  41724285 ttatgacatgtccataagttgttttcagcttattttatataagctctc 41724238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 472
Target Start/End: Original strand, 3015840 - 3015886
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    |||||||||||||||||| |||||||| || |||| |||||||||||    
T  3015840 ttatgacatgtccataagatgttttcatcttattttaataagctctc 3015886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 460
Target Start/End: Original strand, 12923322 - 12923356
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaattt 460  Q
    |||||||||||||||||||||||||||||| ||||    
T  12923322 ttatgacatgtccataagttgttttcagcttattt 12923356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 472
Target Start/End: Original strand, 30923852 - 30923941
Alignment:
Q  382 tataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    ||||||||||||||||||| |||  |||| || |||||||    |||||||||||| ||||| ||||||||||| ||||| |||| |||||    
T  30923852 tataaacacttgtgagactgtttatgagagct-atggaaacagcttatgacatgtctataagctgttttcagcttatttctataaactctc 30923941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 472
Target Start/End: Complemental strand, 31010475 - 31010429
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    |||||||||||||||||| ||||||||||| | ||| ||||||||||    
T  31010475 ttatgacatgtccataagctgttttcagcttaattccataagctctc 31010429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 480
Target Start/End: Complemental strand, 13371177 - 13371136
Alignment:
Q  439 ataagttgttttcagctaatttcaataagctctccataatag 480  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||    
T  13371177 ataagttgttttcagcttatttccataagctcttcataatag 13371136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 434 - 475
Target Start/End: Complemental strand, 23785320 - 23785279
Alignment:
Q  434 tgtccataagttgttttcagctaatttcaataagctctccat 475  Q
    ||||||||||||||||||||||  |||| |||||||||||||    
T  23785320 tgtccataagttgttttcagcttgtttccataagctctccat 23785279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 480
Target Start/End: Complemental strand, 24281191 - 24281066
Alignment:
Q  355 attgacttattttagtttatctacatctataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagc 454  Q
    |||||||||||| ||| |||||||   ||||| |||||||| || | ||||||||| || ||| |||    |||||| || ||||||||||||||||| |    
T  24281191 attgacttatttgagtctatctactggtataagcacttgtgtgattgtttgagagagcttatgaaaacaacttatgatatctccataagttgttttcaac 24281092  T
Q  455 taatttcaataagctctccataatag 480  Q
    | | ||  ||||||||||||| ||||    
T  24281091 ttactttcataagctctccatgatag 24281066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 484
Target Start/End: Complemental strand, 27792932 - 27792887
Alignment:
Q  439 ataagttgttttcagctaatttcaataagctctccataatagttta 484  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||    
T  27792932 ataagttgttttcagcttatttctataagctctacatgatagttta 27792887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 480
Target Start/End: Original strand, 49546494 - 49546535
Alignment:
Q  439 ataagttgttttcagctaatttcaataagctctccataatag 480  Q
    ||||||||||||||||  ||||||||||||||||||| ||||    
T  49546494 ataagttgttttcagcatatttcaataagctctccatgatag 49546535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 480
Target Start/End: Complemental strand, 41633431 - 41633379
Alignment:
Q  428 atgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||||||||| |||| |||||||||||| ||||  |||||||||||| |||||    
T  41633431 atgacatgtctataaattgttttcagcttattttcataagctctccaaaatag 41633379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 383 - 462
Target Start/End: Complemental strand, 42530376 - 42530293
Alignment:
Q  383 ataaacacttgtgagactttttgagagacctcatggaaat-gctt--tatgacatgtccataagttg-ttttcagctaatttca 462  Q
    |||| ||||||||||||| ||| ||| | || |||||||| ||||  ||||||||||||||||| || ||||||||||||||||    
T  42530376 ataagcacttgtgagactgtttcagaaagcttatggaaatagcttattatgacatgtccataagctgtttttcagctaatttca 42530293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 427 - 455
Target Start/End: Original strand, 42817220 - 42817248
Alignment:
Q  427 tatgacatgtccataagttgttttcagct 455  Q
    |||||||||||||||||||||||||||||    
T  42817220 tatgacatgtccataagttgttttcagct 42817248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 425 - 474
Target Start/End: Original strand, 9423590 - 9423639
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||||| |||||||||||||||||| ||||||| ||||||||||    
T  9423590 tttatgacatgttcataagttgttttcagcttatttcaagaagctctcca 9423639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 427 - 466
Target Start/End: Complemental strand, 33894699 - 33894660
Alignment:
Q  427 tatgacatgtccataagttgttttcagctaatttcaataa 466  Q
    ||||||||||||||||||||||||||||| ||||||||||    
T  33894699 tatgacatgtccataagttgttttcagcttatttcaataa 33894660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 389 - 467
Target Start/End: Complemental strand, 39345581 - 39345503
Alignment:
Q  389 acttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataag 467  Q
    |||||||||||| ||||  |||  |||||||||   |||||||||||||||||||||| |||||||| ||||| |||||    
T  39345581 acttgtgagactgtttggtagagttcatggaaacagtttatgacatgtccataagttgctttcagcttatttccataag 39345503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 480
Target Start/End: Complemental strand, 46082109 - 46082055
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||||||||| ||||||||||||||||||| ||||  |||||||||||| |||||    
T  46082109 ttatgacatgaccataagttgttttcagcttattttcataagctctccagaatag 46082055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 429 - 474
Target Start/End: Original strand, 24363601 - 24363646
Alignment:
Q  429 tgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||||||||||||||||||||| ||||| |||| |||||||    
T  24363601 tgacatgtccataagttgttttcagcttatttccataacctctcca 24363646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 426 - 475
Target Start/End: Complemental strand, 32329142 - 32329093
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccat 475  Q
    ||||||||||||| |||||||||||||||||||  | |||||||||||||    
T  32329142 ttatgacatgtccctaagttgttttcagctaatacctataagctctccat 32329093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 474
Target Start/End: Complemental strand, 7244825 - 7244705
Alignment:
Q  355 attgacttattttagtttatctacatctataaacacttgtgagactt-tttgagagacctcatggaaatgctttatgacatgtccataagttgttttcag 453  Q
    |||| ||| ||| |||||||||||  | |||||||||| | ||| || ||||| ||| || |||||||   |||||||||||  ||||||||||||||||    
T  7244825 attggcttgtttgagtttatctactgccataaacacttctaagatttgtttgaaagagctgatggaaacaatttatgacatgctcataagttgttttcag 7244726  T
Q  454 ctaatttcaataagctctcca 474  Q
    || ||||  ||||||||||||    
T  7244725 cttattttcataagctctcca 7244705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 474
Target Start/End: Complemental strand, 35267435 - 35267387
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||||| |||| ||||||||||||| ||||| ||||||||||||    
T  35267435 ttatgacatgttcataggttgttttcagcttatttctataagctctcca 35267387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 383 - 455
Target Start/End: Complemental strand, 36538024 - 36537952
Alignment:
Q  383 ataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagct 455  Q
    |||||||||||||||| | ||||||||| || |||||||    ||||||||||| ||||||||||||| ||||    
T  36538024 ataaacacttgtgagattgtttgagagaacttatggaaacaacttatgacatgttcataagttgtttttagct 36537952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 470
Target Start/End: Complemental strand, 39360096 - 39360052
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctc 470  Q
    ||||||||| ||||||||||| |||||||| ||||||||||||||    
T  39360096 ttatgacatatccataagttgctttcagcttatttcaataagctc 39360052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 425 - 469
Target Start/End: Original strand, 44151476 - 44151520
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagct 469  Q
    ||||||||||||||||||| ||||||||||| ||||| |||||||    
T  44151476 tttatgacatgtccataagatgttttcagcttatttccataagct 44151520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 474
Target Start/End: Original strand, 36598318 - 36598401
Alignment:
Q  391 ttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||| | ||||||||| || |||||||    ||||||||||| |||||| ||||||||||| ||||||| | ||||||||    
T  36598318 ttgtgagattgtttgagagagcttatggaaacatcttatgacatgttcataagctgttttcagcttatttcaaaacgctctcca 36598401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 480
Target Start/End: Original strand, 6263361 - 6263414
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatag 480  Q
    |||||| |||||||||||||||||| |||| ||||| ||| ||||||||||||||    
T  6263361 ttatgagatgtccataagttgtttt-agcttatttccatatgctctccataatag 6263414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 472
Target Start/End: Original strand, 12234886 - 12234932
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    |||||||||||| ||||| ||||||||||| ||||| ||||||||||    
T  12234886 ttatgacatgtctataagctgttttcagcttatttccataagctctc 12234932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 389 - 467
Target Start/End: Original strand, 28727723 - 28727801
Alignment:
Q  389 acttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataag 467  Q
    ||||| |||||| ||||||||| || ||||||| |  ||||||||||| | || ||||||||||||| ||||| |||||    
T  28727723 acttgcgagactgtttgagagagcttatggaaacggcttatgacatgttcgtatgttgttttcagcttatttctataag 28727801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 39593656 - 39593694
Alignment:
Q  236 atcgaacttcaattgttggaatatcaagtccaactctgt 274  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  39593656 atcgaacttcaattgtaggaatatcaactccaactctgt 39593694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 471
Target Start/End: Complemental strand, 4966229 - 4966184
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    |||||| ||||||||||||||||||||| | ||||| |||||||||    
T  4966229 ttatgatatgtccataagttgttttcagtttatttccataagctct 4966184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 470
Target Start/End: Complemental strand, 39334267 - 39334222
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagctc 470  Q
    ||||||||||||||||||||||  ||||||| ||||| ||||||||    
T  39334267 tttatgacatgtccataagttgcattcagcttatttccataagctc 39334222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 388 - 472
Target Start/End: Original strand, 3610699 - 3610783
Alignment:
Q  388 cacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    ||||||||| |||||||| || |||| |||||||    | ||||||||||||||||   ||||||||| ||||| ||||||||||    
T  3610699 cacttgtgatactttttgggaaaccttatggaaacagctaatgacatgtccataagcctttttcagcttatttctataagctctc 3610783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 428 - 456
Target Start/End: Complemental strand, 6977485 - 6977457
Alignment:
Q  428 atgacatgtccataagttgttttcagcta 456  Q
    |||||||||||||||||||||||||||||    
T  6977485 atgacatgtccataagttgttttcagcta 6977457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 470
Target Start/End: Original strand, 28521009 - 28521053
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctc 470  Q
    |||||||||||| ||||| |||||||||||| |||| ||||||||    
T  28521009 ttatgacatgtctataagctgttttcagctattttccataagctc 28521053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 33645958 - 33646006
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||||| |||||||||||| || | ||||| ||||||||||||    
T  33645958 ttatgacatgtctataagttgtttttaggttatttccataagctctcca 33646006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000005; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 425 - 476
Target Start/End: Original strand, 19138713 - 19138764
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagctctccata 476  Q
    |||||||||||| ||||| |||||||||||| ||||| ||||||||||||||    
T  19138713 tttatgacatgtacataaattgttttcagcttatttccataagctctccata 19138764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 427 - 469
Target Start/End: Complemental strand, 35963313 - 35963271
Alignment:
Q  427 tatgacatgtccataagttgttttcagctaatttcaataagct 469  Q
    ||||||||||||||||||||||||||||| ||||| |||||||    
T  35963313 tatgacatgtccataagttgttttcagcttatttccataagct 35963271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 383 - 472
Target Start/End: Complemental strand, 6109599 - 6109510
Alignment:
Q  383 ataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    |||||||||||||||| | |||  |||| || |||||||    |||||| ||||||||||||||||||||||| ||||| | ||||||||    
T  6109599 ataaacacttgtgagaatattttggagagcttatggaaaaaaattatgatatgtccataagttgttttcagcttatttccaaaagctctc 6109510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 18543194 - 18543241
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||||||    
T  18543194 ttatgacatgtccatgagttgttttcagcttatttc-ataagctctcca 18543241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 427 - 479
Target Start/End: Original strand, 37690634 - 37690686
Alignment:
Q  427 tatgacatgtccataagttgttttcagctaatttcaataagctctccataata 479  Q
    ||||||||||  ||||| ||||||||||| ||||| |||||||||||||||||    
T  37690634 tatgacatgttaataagctgttttcagcttatttccataagctctccataata 37690686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 503
Target Start/End: Original strand, 8177529 - 8177604
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatagtttagcttatatgaaaacagttt 503  Q
    |||||| ||||||||||||||||||||| | ||||  ||||||||||||  ||||  |||||  ||||||||||||||    
T  8177529 ttatgatatgtccataagttgttttcaggttattttcataagctctccaggatagcatagct--tatgaaaacagttt 8177604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 472
Target Start/End: Original strand, 32194076 - 32194122
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    ||||||||| |||||||||||||||||||| ||||  ||||||||||    
T  32194076 ttatgacatttccataagttgttttcagcttatttatataagctctc 32194122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 425 - 479
Target Start/End: Complemental strand, 32223597 - 32223544
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagctctccataata 479  Q
    |||||||||||||  |||||||||||||| ||| ||||||||||||| |||||||    
T  32223597 tttatgacatgtct-taagttgttttcagttaagttcaataagctcttcataata 32223544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 431 - 506
Target Start/End: Complemental strand, 37968946 - 37968869
Alignment:
Q  431 acatgtccataagttgttttcagctaatttcaataagctctccataatag--tttagcttatatgaaaacagtttgac 506  Q
    ||||||||||||| |||||| |||| ||||  ||||| ||||||| ||||  |||||||| |||||||||| ||||||    
T  37968946 acatgtccataagctgtttttagcttatttttataagatctccatgatagtttttagcttctatgaaaacactttgac 37968869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 471
Target Start/End: Original strand, 17369436 - 17369481
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    |||||||||||| ||||||||||||||| | ||||| |||||||||    
T  17369436 ttatgacatgtctataagttgttttcagattatttctataagctct 17369481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 480
Target Start/End: Original strand, 20028500 - 20028541
Alignment:
Q  439 ataagttgttttcagctaatttcaataagctctccataatag 480  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||    
T  20028500 ataagttgttttcagcttatttctataagctcttcataatag 20028541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 391 - 472
Target Start/End: Original strand, 28586728 - 28586809
Alignment:
Q  391 ttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    |||||| ||| |||| |||| || ||||||||   ||||||||| ||| |||| ||||||||||| ||||| ||||||||||    
T  28586728 ttgtgaaactgtttgggagagcttatggaaatagcttatgacatatccgtaagctgttttcagcttatttcgataagctctc 28586809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 474
Target Start/End: Original strand, 33533535 - 33533584
Alignment:
Q  425 tttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||| | ||||||||||||||| || ||||| ||||||||||||    
T  33533535 tttatgacatattcataagttgttttcaacttatttccataagctctcca 33533584  T

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Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 466
Target Start/End: Complemental strand, 1899227 - 1899187
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataa 466  Q
    ||||||||||| |||||||||||||||||| ||||| ||||    
T  1899227 ttatgacatgtgcataagttgttttcagcttatttccataa 1899187  T

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Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 474
Target Start/End: Complemental strand, 14331440 - 14331392
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||||||||||| || |||||||| ||||  ||||||||||||    
T  14331440 ttatgacatgtccataagctgatttcagcttattttcataagctctcca 14331392  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 430 - 474
Target Start/End: Original strand, 15074750 - 15074794
Alignment:
Q  430 gacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||||||||||||| ||||||||||| ||||| ||||||| ||||    
T  15074750 gacatgtccataagctgttttcagcttatttccataagctttcca 15074794  T

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Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 426 - 474
Target Start/End: Original strand, 40205071 - 40205119
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctcca 474  Q
    |||| ||||||||||||  ||||||||||| ||||| ||||||||||||    
T  40205071 ttataacatgtccataatctgttttcagcttatttctataagctctcca 40205119  T

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Target: scaffold0072 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 426 - 505
Target Start/End: Complemental strand, 5032 - 4951
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctccataatagttta--gcttatatgaaaacagtttga 505  Q
    |||||||||||||||||| || ||| |||| ||||| ||||||| | ||| ||||||||  ||||||||| |||||||||||    
T  5032 ttatgacatgtccataagctgattttagcttatttctataagctatacatgatagtttatggcttatatggaaacagtttga 4951  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 355 - 471
Target Start/End: Original strand, 159899 - 160015
Alignment:
Q  355 attgacttattttagtttatctacatctataaacacttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagc 454  Q
    |||| ||||||| || ||||||||   ||||||||||||||| ||| |||  |||| || |||||||   ||||||||||||| |||||  |||||||||    
T  159899 attggcttatttgagcttatctactaatataaacacttgtgaaactattttggagaactaatggaaacagtttatgacatgtctataagcagttttcagc 159998  T
Q  455 taatttcaataagctct 471  Q
    | ||||| | |||||||    
T  159999 ttatttccacaagctct 160015  T

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Target: scaffold0311 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 428 - 466
Target Start/End: Original strand, 10616 - 10654
Alignment:
Q  428 atgacatgtccataagttgttttcagctaatttcaataa 466  Q
    |||||||||||||||||||||||||||| ||||| ||||    
T  10616 atgacatgtccataagttgttttcagcttatttccataa 10654  T

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Target: scaffold0153 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0153
Description:

Target: scaffold0153; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 473
Target Start/End: Original strand, 6492 - 6538
Alignment:
Q  427 tatgacatgtccataagttgttttcagctaatttcaataagctctcc 473  Q
    ||||||||||| ||||||||||||||| | ||||| |||||||||||    
T  6492 tatgacatgtctataagttgttttcagtttatttccataagctctcc 6538  T

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Target: scaffold0153; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 427 - 473
Target Start/End: Original strand, 13512 - 13558
Alignment:
Q  427 tatgacatgtccataagttgttttcagctaatttcaataagctctcc 473  Q
    ||||||||||| ||||||||||||||| | ||||| |||||||||||    
T  13512 tatgacatgtctataagttgttttcagtttatttccataagctctcc 13558  T

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Target: scaffold0147 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0147
Description:

Target: scaffold0147; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 426 - 472
Target Start/End: Original strand, 12701 - 12747
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctctc 472  Q
    |||||||||||||||||||||||||||||| |  || ||||||||||    
T  12701 ttatgacatgtccataagttgttttcagcttagctccataagctctc 12747  T

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Target: scaffold0254 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 471
Target Start/End: Complemental strand, 3546 - 3501
Alignment:
Q  426 ttatgacatgtccataagttgttttcagctaatttcaataagctct 471  Q
    |||||| ||||||||||||||||||||||| ||||| |||| ||||    
T  3546 ttatgatatgtccataagttgttttcagcttatttccataatctct 3501  T

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Target: scaffold0089 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 439 - 480
Target Start/End: Original strand, 33637 - 33678
Alignment:
Q  439 ataagttgttttcagctaatttcaataagctctccataatag 480  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||    
T  33637 ataagttgttttcagcttatttccataagctcttcataatag 33678  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 415 - 451
Target Start/End: Original strand, 51938 - 51974
Alignment:
Q  415 atggaaatgctttatgacatgtccataagttgttttc 451  Q
    ||||||||  |||||||||||||||||||||||||||    
T  51938 atggaaataatttatgacatgtccataagttgttttc 51974  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 389 - 461
Target Start/End: Complemental strand, 27686 - 27614
Alignment:
Q  389 acttgtgagactttttgagagacctcatggaaatgctttatgacatgtccataagttgttttcagctaatttc 461  Q
    |||| ||||||| |||| |||| || ||||||||   |||||||||| | ||||||||||||||||| |||||    
T  27686 acttctgagactgtttgggagagcttatggaaatagcttatgacatggctataagttgttttcagcttatttc 27614  T

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