View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20587_low_7 (Length: 255)

Name: NF20587_low_7
Description: NF20587
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20587_low_7
NF20587_low_7
[»] chr7 (40 HSPs)
chr7 (1-93)||(12218534-12218626)
chr7 (1-90)||(27456211-27456299)
chr7 (1-92)||(34333281-34333372)
chr7 (1-91)||(29993585-29993675)
chr7 (1-89)||(1736980-1737068)
chr7 (1-89)||(34606261-34606349)
chr7 (1-88)||(47656981-47657068)
chr7 (1-89)||(8754683-8754771)
chr7 (1-93)||(18485957-18486049)
chr7 (1-92)||(24798501-24798591)
chr7 (1-64)||(30810680-30810743)
chr7 (1-91)||(4628564-4628654)
chr7 (1-91)||(34546412-34546502)
chr7 (1-86)||(11686422-11686507)
chr7 (1-55)||(47083089-47083143)
chr7 (1-90)||(5239284-5239373)
chr7 (1-89)||(24438477-24438565)
chr7 (1-88)||(28587911-28587997)
chr7 (1-60)||(45045799-45045858)
chr7 (1-90)||(47839492-47839580)
chr7 (1-92)||(5729343-5729434)
chr7 (1-55)||(23363265-23363319)
chr7 (1-90)||(37631640-37631729)
chr7 (1-62)||(43594134-43594195)
chr7 (1-49)||(42044391-42044439)
chr7 (1-55)||(7689298-7689352)
chr7 (1-55)||(13064975-13065029)
chr7 (1-55)||(18117177-18117231)
chr7 (1-39)||(37674202-37674240)
chr7 (1-91)||(22739825-22739911)
chr7 (1-85)||(46716642-46716726)
chr7 (4-39)||(20116940-20116975)
chr7 (20-87)||(22973600-22973667)
chr7 (9-55)||(4100630-4100676)
chr7 (1-55)||(33636486-33636540)
chr7 (1-62)||(525173-525234)
chr7 (5-62)||(4087650-4087707)
chr7 (1-89)||(18470037-18470126)
chr7 (1-45)||(18220629-18220673)
chr7 (1-45)||(18220768-18220812)
[»] scaffold0014 (1 HSPs)
scaffold0014 (3-94)||(68390-68481)
[»] chr8 (42 HSPs)
chr8 (1-92)||(33357227-33357318)
chr8 (1-93)||(16785083-16785174)
chr8 (1-89)||(34228682-34228770)
chr8 (1-90)||(11112638-11112727)
chr8 (1-89)||(30675670-30675758)
chr8 (1-91)||(168464-168554)
chr8 (1-91)||(27988597-27988687)
chr8 (1-91)||(28045899-28045989)
chr8 (1-93)||(4648191-4648282)
chr8 (1-88)||(16888642-16888728)
chr8 (1-91)||(13643010-13643100)
chr8 (1-91)||(13743435-13743525)
chr8 (1-91)||(29444238-29444328)
chr8 (1-94)||(4537842-4537935)
chr8 (1-90)||(12203854-12203942)
chr8 (1-90)||(12448282-12448370)
chr8 (12-89)||(12652630-12652707)
chr8 (1-90)||(36730444-36730532)
chr8 (1-89)||(37373206-37373293)
chr8 (1-92)||(9063150-9063240)
chr8 (1-64)||(9253999-9254062)
chr8 (1-92)||(9278209-9278300)
chr8 (1-88)||(21595848-21595934)
chr8 (1-55)||(16890578-16890632)
chr8 (1-87)||(20831651-20831737)
chr8 (1-63)||(42035079-42035141)
chr8 (1-62)||(2805358-2805419)
chr8 (1-86)||(9537922-9538007)
chr8 (1-55)||(7304616-7304670)
chr8 (1-55)||(32113942-32113996)
chr8 (1-90)||(43119216-43119305)
chr8 (1-93)||(10618014-10618106)
chr8 (1-89)||(16394159-16394247)
chr8 (1-89)||(29235235-29235323)
chr8 (1-65)||(40831301-40831365)
chr8 (1-55)||(34192809-34192863)
chr8 (5-64)||(28626793-28626852)
chr8 (1-51)||(17467641-17467691)
chr8 (1-50)||(3930331-3930380)
chr8 (1-45)||(42433641-42433685)
chr8 (1-35)||(30933419-30933453)
chr8 (1-38)||(22451835-22451872)
[»] chr2 (38 HSPs)
chr2 (1-92)||(30486207-30486298)
chr2 (1-91)||(561616-561706)
chr2 (1-89)||(20552931-20553019)
chr2 (1-89)||(31438646-31438734)
chr2 (1-91)||(22567600-22567690)
chr2 (1-92)||(26387162-26387253)
chr2 (1-92)||(31390009-31390100)
chr2 (1-91)||(32860100-32860190)
chr2 (1-90)||(1859161-1859250)
chr2 (1-86)||(4381798-4381883)
chr2 (1-90)||(22887749-22887838)
chr2 (1-94)||(38590972-38591065)
chr2 (1-89)||(43637165-43637252)
chr2 (1-89)||(44587902-44587990)
chr2 (1-92)||(27856494-27856585)
chr2 (1-62)||(2898098-2898159)
chr2 (1-90)||(6580188-6580277)
chr2 (1-90)||(26891761-26891850)
chr2 (1-93)||(34442630-34442721)
chr2 (1-89)||(38296178-38296265)
chr2 (1-92)||(22068418-22068508)
chr2 (1-51)||(11021320-11021370)
chr2 (1-62)||(3668211-3668272)
chr2 (10-90)||(32360976-32361056)
chr2 (1-64)||(8969505-8969568)
chr2 (1-55)||(5093637-5093691)
chr2 (1-55)||(27584772-27584826)
chr2 (1-45)||(39531868-39531912)
chr2 (1-92)||(4022577-4022667)
chr2 (1-87)||(13574127-13574211)
chr2 (1-55)||(5881251-5881309)
chr2 (11-92)||(44854448-44854529)
chr2 (1-45)||(15079056-15079100)
chr2 (1-55)||(25782931-25782982)
chr2 (1-64)||(28600992-28601054)
chr2 (1-64)||(35851849-35851912)
chr2 (2-55)||(30217662-30217716)
chr2 (1-90)||(34123122-34123211)
[»] chr6 (35 HSPs)
chr6 (1-99)||(20897938-20898036)
chr6 (1-92)||(23402135-23402226)
chr6 (1-87)||(2350654-2350740)
chr6 (1-91)||(18276713-18276802)
chr6 (1-89)||(392096-392184)
chr6 (1-91)||(3515764-3515854)
chr6 (1-90)||(27433491-27433580)
chr6 (1-90)||(29451213-29451301)
chr6 (1-92)||(34396625-34396716)
chr6 (1-64)||(34477648-34477711)
chr6 (1-91)||(1391276-1391365)
chr6 (1-91)||(7851257-7851347)
chr6 (1-91)||(32929606-32929696)
chr6 (1-90)||(13529454-13529543)
chr6 (4-89)||(35043890-35043975)
chr6 (1-89)||(12145215-12145303)
chr6 (1-85)||(34851947-34852030)
chr6 (1-91)||(3026107-3026195)
chr6 (1-92)||(4215692-4215783)
chr6 (1-64)||(26467222-26467285)
chr6 (1-90)||(31280320-31280409)
chr6 (1-89)||(2580952-2581040)
chr6 (1-91)||(12525717-12525807)
chr6 (1-55)||(25165511-25165565)
chr6 (9-89)||(21878453-21878533)
chr6 (1-89)||(28225221-28225308)
chr6 (1-64)||(11115193-11115256)
chr6 (1-64)||(13417060-13417123)
chr6 (1-64)||(23629674-23629737)
chr6 (1-64)||(32985291-32985354)
chr6 (1-63)||(1840345-1840407)
chr6 (1-55)||(9661020-9661074)
chr6 (2-55)||(29978266-29978319)
chr6 (1-47)||(961051-961097)
chr6 (1-45)||(10431780-10431824)
[»] chr5 (26 HSPs)
chr5 (1-94)||(10069964-10070057)
chr5 (1-95)||(10054450-10054544)
chr5 (1-91)||(13661806-13661896)
chr5 (1-91)||(35132520-35132610)
chr5 (1-89)||(34650931-34651018)
chr5 (1-89)||(35504338-35504426)
chr5 (1-92)||(8787336-8787427)
chr5 (1-93)||(4837254-4837345)
chr5 (1-64)||(19647756-19647819)
chr5 (1-91)||(13470149-13470239)
chr5 (1-89)||(11958065-11958153)
chr5 (1-89)||(12506296-12506384)
chr5 (1-93)||(39069377-39069468)
chr5 (1-103)||(6283548-6283650)
chr5 (1-94)||(20175222-20175315)
chr5 (1-55)||(21547492-21547546)
chr5 (1-55)||(40564502-40564556)
chr5 (1-61)||(9721705-9721765)
chr5 (1-61)||(31909659-31909719)
chr5 (1-55)||(11846106-11846160)
chr5 (1-88)||(2619655-2619742)
chr5 (1-55)||(19436934-19436988)
chr5 (1-55)||(40057341-40057395)
chr5 (1-62)||(6284822-6284883)
chr5 (1-62)||(39067033-39067095)
chr5 (1-64)||(6042145-6042209)
[»] chr3 (43 HSPs)
chr3 (1-90)||(272219-272308)
chr3 (1-89)||(48725271-48725359)
chr3 (1-91)||(18014670-18014760)
chr3 (1-91)||(46352632-46352722)
chr3 (1-91)||(52520679-52520769)
chr3 (1-90)||(49893330-49893419)
chr3 (1-89)||(39074419-39074507)
chr3 (1-92)||(13159894-13159985)
chr3 (1-88)||(42964347-42964434)
chr3 (1-86)||(41554038-41554122)
chr3 (1-89)||(20923992-20924080)
chr3 (1-89)||(28139309-28139397)
chr3 (1-89)||(52246582-52246670)
chr3 (1-91)||(40362678-40362768)
chr3 (1-89)||(43786871-43786959)
chr3 (1-92)||(858586-858677)
chr3 (7-90)||(41304004-41304087)
chr3 (1-86)||(50359284-50359368)
chr3 (1-89)||(2505350-2505437)
chr3 (1-89)||(4168183-4168271)
chr3 (1-64)||(2119456-2119519)
chr3 (1-64)||(42548120-42548183)
chr3 (1-64)||(53489922-53489985)
chr3 (8-69)||(2391627-2391688)
chr3 (8-69)||(2393388-2393449)
chr3 (1-62)||(7468438-7468499)
chr3 (1-64)||(22248911-22248974)
chr3 (4-91)||(52718166-52718252)
chr3 (1-55)||(10617382-10617436)
chr3 (1-55)||(29241671-29241725)
chr3 (1-63)||(43269837-43269899)
chr3 (10-89)||(23925280-23925359)
chr3 (1-91)||(11308308-11308398)
chr3 (1-55)||(41993717-41993771)
chr3 (1-83)||(50395660-50395742)
chr3 (29-89)||(2362801-2362861)
chr3 (5-81)||(2938142-2938217)
chr3 (1-55)||(38852248-38852305)
chr3 (1-51)||(31514829-31514879)
chr3 (1-38)||(50299043-50299080)
chr3 (1-69)||(24488386-24488454)
chr3 (1-37)||(33140937-33140973)
chr3 (1-64)||(49529364-49529430)
[»] chr1 (51 HSPs)
chr1 (1-94)||(15227734-15227827)
chr1 (1-92)||(9266826-9266917)
chr1 (1-91)||(30657606-30657696)
chr1 (1-89)||(17333380-17333467)
chr1 (1-93)||(42770088-42770180)
chr1 (1-90)||(29210412-29210501)
chr1 (1-90)||(29657770-29657859)
chr1 (1-89)||(24178561-24178649)
chr1 (1-63)||(3784811-3784873)
chr1 (1-91)||(12072160-12072250)
chr1 (1-91)||(18043160-18043250)
chr1 (1-87)||(38702031-38702117)
chr1 (1-90)||(13961211-13961299)
chr1 (1-90)||(19031913-19032002)
chr1 (1-89)||(5694321-5694409)
chr1 (1-55)||(30294479-30294533)
chr1 (1-87)||(36446423-36446508)
chr1 (1-63)||(47010019-47010081)
chr1 (1-91)||(51065846-51065936)
chr1 (1-90)||(48071482-48071570)
chr1 (1-89)||(3097659-3097747)
chr1 (1-93)||(14350375-14350467)
chr1 (1-89)||(38162850-38162938)
chr1 (1-89)||(38335170-38335257)
chr1 (1-91)||(29683193-29683284)
chr1 (1-55)||(6770371-6770425)
chr1 (1-87)||(23473562-23473648)
chr1 (1-55)||(35985719-35985773)
chr1 (1-55)||(45431312-45431366)
chr1 (1-55)||(47532768-47532822)
chr1 (4-61)||(51368886-51368943)
chr1 (1-63)||(26228219-26228281)
chr1 (1-55)||(50128270-50128324)
chr1 (15-88)||(19011108-19011180)
chr1 (1-61)||(15282612-15282672)
chr1 (1-92)||(41730302-41730396)
chr1 (1-45)||(52431625-52431669)
chr1 (1-55)||(8473012-8473066)
chr1 (1-91)||(43286720-43286810)
chr1 (11-94)||(28726013-28726097)
chr1 (1-61)||(35700748-35700808)
chr1 (1-45)||(37315365-37315409)
chr1 (9-64)||(10976008-10976063)
chr1 (1-89)||(28481844-28481928)
chr1 (5-64)||(39912381-39912440)
chr1 (1-91)||(12306916-12307005)
chr1 (1-39)||(37503264-37503302)
chr1 (9-55)||(39497341-39497387)
chr1 (1-62)||(3838875-3838936)
chr1 (1-65)||(49867453-49867518)
chr1 (7-64)||(52749627-52749684)
[»] chr4 (45 HSPs)
chr4 (1-89)||(32217045-32217133)
chr4 (4-91)||(29591187-29591274)
chr4 (1-92)||(43944504-43944595)
chr4 (1-91)||(789628-789718)
chr4 (1-91)||(15186241-15186331)
chr4 (1-90)||(4089141-4089230)
chr4 (1-90)||(18067977-18068066)
chr4 (1-93)||(16536044-16536136)
chr4 (1-89)||(24679740-24679827)
chr4 (1-89)||(28755621-28755708)
chr4 (1-93)||(43202481-43202573)
chr4 (1-89)||(54054548-54054636)
chr4 (1-89)||(54655974-54656062)
chr4 (1-89)||(54897308-54897396)
chr4 (1-91)||(6164092-6164181)
chr4 (4-86)||(50619089-50619171)
chr4 (1-90)||(4268920-4269009)
chr4 (9-92)||(12356241-12356324)
chr4 (1-88)||(19503203-19503289)
chr4 (1-64)||(42898844-42898907)
chr4 (1-92)||(46688303-46688399)
chr4 (1-91)||(7768936-7769026)
chr4 (1-90)||(55882683-55882771)
chr4 (1-89)||(32202578-32202666)
chr4 (1-93)||(37987932-37988023)
chr4 (1-64)||(54945876-54945939)
chr4 (1-55)||(4220229-4220283)
chr4 (1-55)||(39843941-39843995)
chr4 (1-91)||(47231970-47232060)
chr4 (1-55)||(53655976-53656030)
chr4 (1-50)||(36395138-36395187)
chr4 (1-92)||(46148938-46149027)
chr4 (1-90)||(50167590-50167677)
chr4 (1-90)||(49915158-49915247)
chr4 (1-89)||(3783599-3783687)
chr4 (1-93)||(5091708-5091800)
chr4 (1-40)||(30387232-30387271)
chr4 (1-92)||(33108771-33108861)
chr4 (1-51)||(30154261-30154311)
chr4 (8-62)||(52533890-52533944)
chr4 (1-86)||(42815113-42815197)
chr4 (1-45)||(53268764-53268808)
chr4 (14-64)||(1432653-1432703)
chr4 (1-38)||(41265510-41265547)
chr4 (1-62)||(50603254-50603315)
[»] scaffold0188 (1 HSPs)
scaffold0188 (1-88)||(6208-6295)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-92)||(147003-147094)
[»] scaffold0264 (1 HSPs)
scaffold0264 (1-91)||(22959-23049)
[»] scaffold0003 (1 HSPs)
scaffold0003 (1-90)||(53783-53872)
[»] scaffold0021 (1 HSPs)
scaffold0021 (1-93)||(116200-116292)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-64)||(7995-8058)
[»] scaffold0549 (1 HSPs)
scaffold0549 (1-64)||(7313-7376)
[»] scaffold0206 (1 HSPs)
scaffold0206 (1-90)||(11068-11155)
[»] scaffold0524 (1 HSPs)
scaffold0524 (1-94)||(820-913)
[»] scaffold0190 (1 HSPs)
scaffold0190 (4-89)||(14896-14981)
[»] scaffold0263 (1 HSPs)
scaffold0263 (2-55)||(19684-19737)
[»] scaffold0045 (2 HSPs)
scaffold0045 (1-62)||(53444-53505)
scaffold0045 (1-89)||(50548-50636)
[»] scaffold1266 (1 HSPs)
scaffold1266 (2-90)||(292-379)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-89)||(25719-25806)
[»] scaffold0034 (1 HSPs)
scaffold0034 (1-92)||(95682-95773)
[»] scaffold1152 (1 HSPs)
scaffold1152 (1-51)||(716-766)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-55)||(40953-41007)
[»] scaffold1128 (1 HSPs)
scaffold1128 (1-45)||(1415-1459)
[»] scaffold0050 (1 HSPs)
scaffold0050 (1-64)||(69251-69314)
[»] scaffold0533 (1 HSPs)
scaffold0533 (1-55)||(5073-5127)
[»] scaffold0325 (1 HSPs)
scaffold0325 (6-52)||(17573-17619)


Alignment Details
Target: chr7 (Bit Score: 65; Significance: 1e-28; HSPs: 40)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 12218534 - 12218626
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaa 93  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| | || ||||| |||||||||||||||||    
T  12218534 aattacacaatttcaatgcattaactactatataatttcctttttcatatacttatccagtgccccgggggcaccggttagcatttcccttaa 12218626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 27456211 - 27456299
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| ||||||||||||||||||| |||||||||| |||||||| | || ||||||||||||||||||||    
T  27456211 aattacacaatttcaatgcattaactactatataatttctttttccatatccttaaccagtgcc-cgggggcaccagttagcatttccct 27456299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 34333372 - 34333281
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||| | || ||||| ||||||||||||||||    
T  34333372 aattacacaatttcaatgcattaattactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctta 34333281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 29993585 - 29993675
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || ||||| | || ||||| |||||||||||||||    
T  29993585 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtgccccgggggcacccgttagcatttccctt 29993675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 1737068 - 1736980
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||| ||||||||||||||| || ||||||||||| ||||||||||||||| |||||||| ||| |||||| |||||||||||||    
T  1737068 aattacactatttcaatgcattaactattatataatttcatttttcatatccttaaccagtgccccagaagcaccggttagcatttccc 1736980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34606349 - 34606261
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| | |  |||||||||||||||||||    
T  34606349 aatttcacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttccc 34606261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 47657068 - 47656981
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcc 88  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||| |||||||| | | |||||| ||||||||||||    
T  47657068 aattacacaatttcaatgcattaattactatataattttctttttcatatccttaaccagtgcccccgaagcaccggttagcatttcc 47656981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 8754683 - 8754771
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgc-cgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||| | |||| ||||| |||||||||||||    
T  8754683 aattacacaatttcaatgcattaactactatataatttcatttttcatatccttaaccagtgctcccagg-gcaccggttagcatttccc 8754771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 18486049 - 18485957
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaa 93  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||  ||||||||| |||||||| | || ||||| |||||||||||||||||    
T  18486049 aattacacaatttcaatacattaattactatataatttccttttcaatatccttaaccagtgccccgggggcaccggttagcatttcccttaa 18485957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 24798501 - 24798591
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||| | | |||||| | || ||||| ||||||||||||||||    
T  24798501 aattacacaatttcaatgcattaactactatataatttcctttttcatatcctcaacaagtgcc-cgggggcaccggttagcatttccctta 24798591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 30810743 - 30810680
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  30810743 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 30810680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 4628654 - 4628564
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||| |||||||||||| ||||| |||||||||||||| ||||||||||||||| || ||||| |||| ||| | |||||||||||||||    
T  4628654 aattaaacaatttcaatgtattaactactatataatttcctttttcatatccttaaccggtgccccaggggcatcggttagcatttccctt 4628564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 34546412 - 34546502
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || || || | || ||| | |||||||||||||||    
T  34546412 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtacctcgggggcatcggttagcatttccctt 34546502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 11686422 - 11686507
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcattt 86  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| |||||  | | | |||||||||||||||||    
T  11686422 aattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtatcccggaagcaccagttagcattt 11686507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 47083143 - 47083089
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  47083143 aattacacaatttcaatacattaactactatataatttcttttttcatatcctta 47083089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 5239373 - 5239284
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| | ||| |||||||  | |  ||||| ||||||||||||||    
T  5239373 aattacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtgctccggaggcaccggttagcatttccct 5239284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 24438565 - 24438477
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||||| |||||||||||||||| ||||||||| |||| ||||||||| ||||| | |||||| | || ||||| |||||||||||||    
T  24438565 aattacataatttcaatgcattaactactatatagtttcctttttcatacccttaactagtgccccgggggcaccggttagcatttccc 24438477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 28587997 - 28587911
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcc 88  Q
    ||||||||||||||||| |||| | |||||||||||||| ||||||||||||||| |||||| | | || ||||| ||||||||||||    
T  28587997 aattacacaatttcaatacattgactactatataatttcctttttcatatccttaaccagtgtc-cgggggcaccggttagcatttcc 28587911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 45045858 - 45045799
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccag 60  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||    
T  45045858 aattacacaatttcaatgcattaattactatataatttcatttttcatacccttaaccag 45045799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 47839580 - 47839492
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||| ||||| || ||||||| ||| ||||||||||||||| ||||| || | ||| |||| ||||||||||||||    
T  47839580 aattacacaatttcaatgtattaactattatataaattcctttttcatatccttaaccagtaccccggga-caccggttagcatttccct 47839492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 5729434 - 5729343
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||  |||||||| |||||| || ||||||||||| ||||||||||||||| |||||||  | ||| |||| |||| |||||||||||    
T  5729434 aattacattatttcaatacattaactattatataatttcctttttcatatccttaaccagtgctccgggaacaccggttaacatttccctta 5729343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 23363265 - 23363319
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||||||||| ||||||| |||||| |||||| ||||||||    
T  23363265 aattacacaatttcaatgcattaactactatacaatttcctttttcttatcctta 23363319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 37631640 - 37631729
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    ||||||| ||||| |||||||||| || ||||||||||| ||||| ||||||||| || ||||| | | |||||| |||| |||||||||    
T  37631640 aattacataattttaatgcattaattattatataatttccttttttatatccttaacccgtgccccggaagcaccggttaacatttccct 37631729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 43594134 - 43594195
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtg 62  Q
    ||||| |||||||||||||||||| || ||||||||||| ||||| ||||||||| ||||||    
T  43594134 aattatacaatttcaatgcattaactattatataatttccttttttatatccttaaccagtg 43594195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 42044391 - 42044439
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcata 49  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||||||    
T  42044391 aattacacaatttcaatctattaactactatataatttcttttttcata 42044439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7689298 - 7689352
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||||||||| |||| || |||||| ||||| |||||||||    
T  7689298 aattacacaatttcaatgcattaattactgtaaaatttccttttttatatcctta 7689352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 13064975 - 13065029
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||| |||||| |||||| || ||||||||||| |||||||||||||||    
T  13064975 aattacacaaattcaatacattaaatattatataatttcctttttcatatcctta 13065029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 18117231 - 18117177
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||||||||||||||| |||||| |||||||||||||| | |||||||| ||||    
T  18117231 aattacacaatttcaatacattaactactatataatttcctctttcatatactta 18117177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 37674202 - 37674240
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttc 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  37674202 aattacacaatttcaatgcattaactactatataatttc 37674240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 22739911 - 22739825
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| ||||||||| ||||  ||||  |||||||| | |||   ||||||||||||||||  |||||||||    
T  22739911 aattacacaatttcaatgcattaactactatatactttc-cttttagtatccttaactagt---gcaggagcaccagttaatatttccctt 22739825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 46716726 - 46716642
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatt 85  Q
    ||||||| ||||||| ||||||||||| ||||||||||| ||||| ||||| ||| ||| |||  |  | |||||||||||||||    
T  46716726 aattacataatttcagtgcattaagtattatataatttccttttttatatctttaaccaatgctccgagggcaccagttagcatt 46716642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 39
Target Start/End: Complemental strand, 20116975 - 20116940
Alignment:
Q  4 tacacaatttcaatgcattaagtactatataatttc 39  Q
    ||||||||||||||||||||| ||||||||||||||    
T  20116975 tacacaatttcaatgcattaattactatataatttc 20116940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 20 - 87
Target Start/End: Complemental strand, 22973667 - 22973600
Alignment:
Q  20 attaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttc 87  Q
    ||||| |||||||||||||||||||| ||||| ||| |||||||| | |  |||| ||||||||||||    
T  22973667 attaactactatataatttctttttttatatcattaaccagtgccccggaggcactagttagcatttc 22973600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Original strand, 4100630 - 4100676
Alignment:
Q  9 aatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||| ||| |||||| |||||||||||||| |||||||||||||||    
T  4100630 aattttaatacattaattactatataatttcctttttcatatcctta 4100676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 33636540 - 33636486
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||| ||||| || ||||||||||  |||||||||| ||||    
T  33636540 aattacacaatttcaatgaattaattattatataattttctttttcatattctta 33636486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 525173 - 525234
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtg 62  Q
    ||||| |||||||||||||||||| |||| |||| |||  ||||||||||| ||| ||||||    
T  525173 aattatacaatttcaatgcattaactactgtatacttttctttttcatatctttaaccagtg 525234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 4087707 - 4087650
Alignment:
Q  5 acacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtg 62  Q
    |||| ||||||||||||||| |||||||||||||| |||||  ||| |||| ||||||    
T  4087707 acactatttcaatgcattaactactatataatttcctttttagtatgcttaaccagtg 4087650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 18470037 - 18470126
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtg-ccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||| ||||| | |||||||||||| |||||  ||| |||| || ||| || | || ||||| |||||||||||||    
T  18470037 aattacacaatttcaatgtattaactgctatataatttcctttttagtatgcttaaccggtgcccccgggggcaccggttagcatttccc 18470126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18220629 - 18220673
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttctttttt 45  Q
    ||||||||||||||||| || ||| |||||||||||||| |||||    
T  18220629 aattacacaatttcaatacagtaattactatataatttccttttt 18220673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 18220768 - 18220812
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttctttttt 45  Q
    |||||||||||||| || |||||| |||||||||||||| |||||    
T  18220768 aattacacaatttctatacattaattactatataatttccttttt 18220812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 68390 - 68481
Alignment:
Q  3 ttacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaat 94  Q
    ||||||||||| |||||||||| |||||||||||||| ||||||||||||||| |||||||| | || ||||||||||||||||||||||||    
T  68390 ttacacaattttaatgcattaactactatataatttcatttttcatatccttaaccagtgccccgggggcaccagttagcatttcccttaat 68481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 4e-28; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33357227 - 33357318
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||  | || ||||||||||||||||||||||    
T  33357227 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccgggggcaccagttagcatttccctta 33357318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 16785174 - 16785083
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaa 93  Q
    ||||||||||||||||| |||||| | |||||||||||||||||||||||||||| |||||||| | |||||||| |||||||||||||||||    
T  16785174 aattacacaatttcaatacattaactgctatataatttcttttttcatatccttaaccagtgcc-ctggagcaccggttagcatttcccttaa 16785083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34228770 - 34228682
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| | || ||||| |||||||||||||    
T  34228770 aattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 34228682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 11112727 - 11112638
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||| | | |  ||||||||||||||||||||    
T  11112727 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgtcccggatgcaccagttagcatttccct 11112638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 30675670 - 30675758
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||| | || ||||| |||||||||||||    
T  30675670 aattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 30675758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 168554 - 168464
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||| | |  ||||| |||||||||||||||    
T  168554 aattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttccctt 168464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 27988597 - 27988687
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||||| | |  ||||| |||||||||||||||    
T  27988597 aattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 27988687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 28045899 - 28045989
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||||| | |  ||||| |||||||||||||||    
T  28045899 aattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccggaggcaccggttagcatttccctt 28045989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 4648282 - 4648191
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaa 93  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||||||||  ||||||| | ||| |||| |||||||||||||||||    
T  4648282 aattacacaatttcaatgtattaactactatataatttcctttttcatatccttaatcagtgccccggga-caccggttagcatttcccttaa 4648191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16888642 - 16888728
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcc 88  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || ||||| | || ||||| ||||||||||||    
T  16888642 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacctgtgcc-cgggggcaccggttagcatttcc 16888728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 13643100 - 13643010
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||| |||||||| |||||||| | || ||||| |||||||||| ||||    
T  13643100 aattacataatttcaatgcattaactactatataatttcctttttcgtatccttaaccagtgccccgggggcaccggttagcattttcctt 13643010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 13743525 - 13743435
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||| |||||||| |||||||| | || ||||| |||||||||| ||||    
T  13743525 aattacataatttcaatgcattaactactatataatttcctttttcgtatccttaaccagtgccccgggggcaccggttagcattttcctt 13743435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 29444238 - 29444328
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||||||||||||||||| |||| |||||||||||||| |||||||||||||||  ||||||| | |||||||| |||| ||||| ||||    
T  29444238 aattacacaatttcaatgcgttaactactatataatttcctttttcatatccttaatcagtgccccgggagcaccggttaacattttcctt 29444328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 4537842 - 4537935
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaat 94  Q
    ||||||| |||||||||||||||| |||||||||||||| | ||| ||||||||| |||||||| | |  ||||| ||||||||||||||||||    
T  4537842 aattacataatttcaatgcattaactactatataatttcctattttatatccttaaccagtgccccggaggcaccggttagcatttcccttaat 4537935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 12203942 - 12203854
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || || || | || ||||| ||||||||||||||    
T  12203942 aattacacaatttcaatgcattaactactatataatttcttttttcatacccttaaccggtacc-cgggggcaccggttagcatttccct 12203854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 12448370 - 12448282
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||||| || || || | || ||||| ||||||||||||||    
T  12448370 aattacacaatttcaatgcattaactactatataatttcttttttcatacccttaaccggtacc-cgggggcaccggttagcatttccct 12448282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 12652707 - 12652630
Alignment:
Q  12 ttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||||||||||| |||||||||||||| ||||||||||||||| |||||||  |||| ||||| |||||||||||||    
T  12652707 ttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccaggggcaccggttagcatttccc 12652630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 36730532 - 36730444
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| | |||| | | || ||||||||||||||| ||||    
T  36730532 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaactagtgtc-ctggggcaccagttagcattcccct 36730444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 37373293 - 37373206
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||| | | || ||||| |||||||||||||    
T  37373293 aattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgtc-cgggggcaccggttagcatttccc 37373206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 9063150 - 9063240
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||| ||| ||||||||||||||| |||||||||||||| ||||||||||||||| |||||||  | ||| |||| ||||||||||||||||    
T  9063150 aattgcacgatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccggga-caccggttagcatttccctta 9063240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 9253999 - 9254062
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||| ||||||||    
T  9253999 aattacacaatttcaatgcattaactactataaaatttcatttttcatatccttaaccagtgcc 9254062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 9278300 - 9278209
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||| ||| | |||| | | |  ||||||||||||||||||||||    
T  9278300 aattacacaatttcaatgcattaactattatataatttcctttttcatatctttaacgagtgtccctgaggcaccagttagcatttccctta 9278209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21595934 - 21595848
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcc 88  Q
    |||||||||||||||||||||||| | |||||||||||| ||||||||| ||||| |||||||| | || ||||| ||||||||||||    
T  21595934 aattacacaatttcaatgcattaactcctatataatttcctttttcatacccttaaccagtgcc-cgggggcaccggttagcatttcc 21595848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 16890578 - 16890632
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  16890578 aattacacaatttcaatgcattaactactatataatttcctttttcatatcctta 16890632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 20831651 - 20831737
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttc 87  Q
    ||||| || ||||||||||||||| |||||||||||||| ||||||||||||||| |||||| | | || ||||| |||||||||||    
T  20831651 aattatactatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttc 20831737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 42035079 - 42035141
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgc 63  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| |||||||    
T  42035079 aattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgc 42035141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 2805358 - 2805419
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtg 62  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||    
T  2805358 aattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtg 2805419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 9537922 - 9538007
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcattt 86  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||||| ||||| || |||  | |||| |||||||||    
T  9537922 aattacacaattttaatgcattaactactatataatttcctttttcatatccttaaccagtaccacagaggaaccaattagcattt 9538007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7304616 - 7304670
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||||    
T  7304616 aattacacaatttcaatgcattaactactatataattttctttttcatatcctta 7304670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 32113996 - 32113942
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||||    
T  32113996 aattaaacaatttcaatgcattaactactatataatttcctttttcatatcctta 32113942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 43119305 - 43119216
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    ||||| |||||||||||||||||| |||||||||||||  ||||||||||| |||  ||||||| |  | ||||| ||||||||||||||    
T  43119305 aattatacaatttcaatgcattaactactatataattttctttttcatatctttaatcagtgccccgagggcaccggttagcatttccct 43119216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 10618106 - 10618014
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaa 93  Q
    ||||||||||||| | |||||||| |||||||||||||  ||||||||||||||| || |||||  ||  ||||| |||||||||| ||||||    
T  10618106 aattacacaatttaattgcattaactactatataattttctttttcatatccttaacctgtgccctagaggcaccggttagcattttccttaa 10618014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 16394159 - 16394247
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||  ||||||||||||||| || ||||||||||  ||||||| ||||||| |||||||| | || ||||| |||||||||||||    
T  16394159 aattacattatttcaatgcattaactattatataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccc 16394247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 29235323 - 29235235
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||| || |||||||||| |||||||||||||||||||| |||||||||  || |||  | ||| |||| |||||||||||||    
T  29235323 aattacacaaatttaatgcattaactactatataatttctttttttatatccttaatcaatgctccgggaacaccggttagcatttccc 29235235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 40831365 - 40831301
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccg 65  Q
    ||||| |||||||||||||||||| |||||||||||||  ||||||||||| ||| |||||||||    
T  40831365 aattatacaatttcaatgcattaactactatataattttctttttcatatctttaaccagtgccg 40831301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 34192863 - 34192809
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||||||||| || ||||||||||| |||||||||| ||||    
T  34192863 aattacacaatttcaatgcattaactagtatataatttcctttttcatattctta 34192809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 28626852 - 28626793
Alignment:
Q  5 acacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||||||||||| |||||| |||||||||||||| ||||||| ||||||| || |||||    
T  28626852 acacaatttcaatacattaactactatataatttcctttttcacatccttaaccggtgcc 28626793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17467691 - 17467641
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatc 51  Q
    |||||||||||||||||||||||| ||||  |||||||| |||||||||||    
T  17467691 aattacacaatttcaatgcattaattactgcataatttcctttttcatatc 17467641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3930331 - 3930380
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatat 50  Q
    |||||||||| ||||||||||||| |||||||||||||| | ||||||||    
T  3930331 aattacacaacttcaatgcattaactactatataatttcctctttcatat 3930380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 42433641 - 42433685
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttctttttt 45  Q
    |||||||||||||||||||||||| || ||||||||||| |||||    
T  42433641 aattacacaatttcaatgcattaactattatataatttccttttt 42433685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 30933419 - 30933453
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataa 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  30933419 aattacacaatttcaatgcattaattactatataa 30933453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 22451872 - 22451835
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataattt 38  Q
    |||||||||||||||||||||||| | |||||||||||    
T  22451872 aattacacaatttcaatgcattaactgctatataattt 22451835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 64; Significance: 4e-28; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 30486298 - 30486207
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| |||||||| | || ||||||||||||||||||||||    
T  30486298 aattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccagttagcatttccctta 30486207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 561616 - 561706
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| | || ||||| |||||||||||||||    
T  561616 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccctt 561706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20553019 - 20552931
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| | || ||||| |||||||||||||    
T  20553019 aattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 20552931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 31438734 - 31438646
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||||||||||||| |||||||| | |||||||| |||||||||||||    
T  31438734 aattacacaatttcaatgcattaactactgtataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttccc 31438646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 22567690 - 22567600
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||| |  ||| ||| |||||||||||||||||    
T  22567690 aattacacaatttcaatacattaactactatataatttcttttttcatatccttaaccagtgtcttaggggcatcagttagcatttccctt 22567600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 26387162 - 26387253
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| | ||| |  | |  ||||||||||||||||||||||    
T  26387162 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacaagtacttcggaggcaccagttagcatttccctta 26387253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 31390100 - 31390009
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    ||||||| ||||||||| |||||| |||||||||||||| ||||||||||||||| | |||||| | |  ||||||||||||||||||||||    
T  31390100 aattacataatttcaatacattaactactatataatttcctttttcatatccttaactagtgccccggaggcaccagttagcatttccctta 31390009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 32860190 - 32860100
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| || ||||| | || ||||| |||| ||||||||||    
T  32860190 aattacacaatttcaatgcattaaatactatataatttccttttttatatccttaacccgtgcccccggggcaccggttaacatttccctt 32860100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 1859250 - 1859161
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    ||||||| |||||||||||||||| ||||||| |||||||||||| ||||||||| ||| | || | || ||||||||||||||||||||    
T  1859250 aattacataatttcaatgcattaactactatacaatttctttttttatatccttaaccattaccccgggggcaccagttagcatttccct 1859161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 4381883 - 4381798
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcattt 86  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||  | || ||||| ||||||||||    
T  4381883 aattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgcaccgggggcaccggttagcattt 4381798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22887838 - 22887749
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||| ||| |||| | |  ||| | ||||||||||||||    
T  22887838 aattacataatttcaatgcattaactactatataatttcttttttcatatccttaaccactgccccggaggcatcggttagcatttccct 22887749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 94
Target Start/End: Original strand, 38590972 - 38591065
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaat 94  Q
    ||||||||||||| ||| |||||| |||| ||||||||| |||||||||| |||| |||||||| ||||  |||| ||||||||||||||||||    
T  38590972 aattacacaattttaatacattaactactgtataatttcctttttcatattcttaaccagtgccccagggacaccggttagcatttcccttaat 38591065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43637252 - 43637165
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| || |||||||||||| |||||| | | || ||||| |||||||||||||    
T  43637252 aattacacaatttcaatgcattaactactatataatttccttattcatatccttaaccagtgtctc-ggggcaccggttagcatttccc 43637165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 44587990 - 44587902
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||| ||||||||| || ||||| | || ||||| |||||||||||||    
T  44587990 aattacacaatttcaatgtattaactactatataatttccttttttatatccttaaccggtgccccgggggcaccggttagcatttccc 44587902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 27856494 - 27856585
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||||||||| || ||||||||||| |||||||||  |||| |||||||| | || ||||| |||| |||||||||||    
T  27856494 aattacacaatttcaatgcattaactattatataatttcctttttcatactcttaaccagtgccccgggggcaccggttaacatttccctta 27856585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 2898159 - 2898098
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtg 62  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||| ||||||    
T  2898159 aattacacaatttcaatgcattaactactatataattttctttttcatatccttaaccagtg 2898098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 6580277 - 6580188
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    ||||||| |||||||||||||||| ||||||||| |||| ||||||||| ||||| |||||||| | || ||||  ||||||||||||||    
T  6580277 aattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgcccccggggcactggttagcatttccct 6580188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 26891761 - 26891850
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| || ||||||||||| ||||| |||||||||  ||||| | | || ||||| ||||||||||||||    
T  26891761 aattacacaatttcaatgcattaactaatatataatttccttttttatatccttaatcagtgtcccgggggcaccggttagcatttccct 26891850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 34442630 - 34442721
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaa 93  Q
    |||||||||||||||||||||||| ||||||||||| |  ||||||||||||||| |  ||||| | || ||||| |||||||||||||||||    
T  34442630 aattacacaatttcaatgcattaactactatataatcttctttttcatatccttaacatgtgcc-ccggggcaccggttagcatttcccttaa 34442721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38296265 - 38296178
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||| ||||| |||||||||||||  ||||||||||| ||| |||||||| || || |||| |||||||||||||    
T  38296265 aattacacaatttcaatgtattaattactatataattttctttttcatatctttaaccagtgccccaaga-caccggttagcatttccc 38296178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 22068418 - 22068508
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    ||||| ||||||||||||||| || |||||||||||| | ||||||||||||||| |||||||| | || ||||  ||||||||||||||||    
T  22068418 aattatacaatttcaatgcat-aactactatataattccctttttcatatccttaaccagtgccccgggggcacttgttagcatttccctta 22068508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 11021320 - 11021370
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatc 51  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  11021320 aattacacaatttcaatgcattaactaccatataatttcttttttcatatc 11021370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3668211 - 3668272
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtg 62  Q
    |||||||||||||||||||||||| |||||||||||||| |||| |||| ||||| ||||||    
T  3668211 aattacacaatttcaatgcattaactactatataatttccttttccatacccttaaccagtg 3668272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 32360976 - 32361056
Alignment:
Q  10 atttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    ||||||||||||||| || ||||||||||  ||||||| ||||||| |||||||| | || ||||| ||||||||||||||    
T  32360976 atttcaatgcattaactattatataattttctttttcacatccttaaccagtgccccgggggcaccggttagcatttccct 32361056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 8969505 - 8969568
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    |||||||| ||||||||||||||| |||||||||||||  ||||||||||||||| | ||||||    
T  8969505 aattacactatttcaatgcattaactactatataattttctttttcatatccttaactagtgcc 8969568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 5093637 - 5093691
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||||||||||| |||||||||| |||||| ||||||| |||||||||||||||    
T  5093637 aattacacaattttaatgcattaactactatttaatttcctttttcatatcctta 5093691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 27584826 - 27584772
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||||||||||||||||| |||| ||||||||||||||  ||||||||||||||    
T  27584826 aattacacaatttcaatgctttaactactatataatttcccttttcatatcctta 27584772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 39531912 - 39531868
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttctttttt 45  Q
    |||||||||||||||||||||||| |||||||||||||| |||||    
T  39531912 aattacacaatttcaatgcattaactactatataatttccttttt 39531868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 4022577 - 4022667
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    ||||||| ||||||||| |||||| |||||| |||||||||||||||||| ||||  ||||  | |  | ||||||||||||||||||||||    
T  4022577 aattacagaatttcaatacattaactactat-taatttcttttttcatattcttaatcagtatcccgtgggcaccagttagcatttccctta 4022667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 13574127 - 13574211
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttc 87  Q
    ||||||||||||||||| |||||| |  |||||| |||| ||||||||||||||| ||||| || |||| ||||| |||||||||||    
T  13574127 aattacacaatttcaatacattaatttttatatattttcctttttcatatccttaaccagtacc-cagg-gcacctgttagcatttc 13574211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5881309 - 5881251
Alignment:
Q  1 aattacacaatttcaatgcat----taagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||||||    ||| |||||||||||||| |||||||||||||||    
T  5881309 aattacacaatttcaatgcatgcattaactactatataatttcctttttcatatcctta 5881251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 44854448 - 44854529
Alignment:
Q  11 tttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||| ||| ||  |||||||||| |||||  |||||||| |||||||| | |||| ||| ||||||||||||||||    
T  44854448 tttcaatgcaataattaacatataatttcctttttattatccttaaccagtgccccgggagtaccggttagcatttccctta 44854529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 15079056 - 15079100
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttctttttt 45  Q
    ||||||||||||||||| |||||| |||||||||||||| |||||    
T  15079056 aattacacaatttcaatacattaactactatataatttccttttt 15079100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25782931 - 25782982
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||||||||   ||||||||||||| |||||||||| ||||    
T  25782931 aattacacaatttcaatgcatta---actatataatttcctttttcatattctta 25782982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 28601054 - 28600992
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||| ||||||||||||||| || |||| ||||||| | ||||||||||||||| ||||||||    
T  28601054 aattatacaatttcaatgcat-aactactttataattccctttttcatatccttaaccagtgcc 28600992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 35851849 - 35851912
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    |||||||  ||||||||||||||| || ||||||||||| ||||||| ||||||| || |||||    
T  35851849 aattacattatttcaatgcattaactattatataatttcctttttcacatccttaaccggtgcc 35851912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 30217662 - 30217716
Alignment:
Q  2 attacacaatttcaatgcattaagtactatataa-tttcttttttcatatcctta 55  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||  ||||||||    
T  30217662 attacacaatttcaatgcaataaatactatataattttcttttttagtatcctta 30217716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 34123122 - 34123211
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||| ||||| ||||||| || |||||||||||||||||  ||| || | ||||| || | |  ||||| ||||||||||||||    
T  34123122 aattacacaaattcaaagcattaactattatataatttcttttttagtatgctcaaccagtaccccggaggcaccggttagcatttccct 34123211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 20898036 - 20897938
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaataaatt 99  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||   || ||||| ||||||||||||||||| |||||    
T  20898036 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccctgggggcaccggttagcatttcccttaaaaaatt 20897938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 23402226 - 23402135
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||| ||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| | |  ||||||||||||||||||||||    
T  23402226 aatttcacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgccccggaggcaccagttagcatttccctta 23402135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 2350740 - 2350654
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttc 87  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| |||||||| | |||||||| |||||||||||    
T  2350740 aattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgccccgggagcaccggttagcatttc 2350654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 18276713 - 18276802
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||| ||||||||||||| |||||||||||||| ||||||||||||||| |||||||| |||| |||||||||| ||||||||||    
T  18276713 aattacacaaattcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc-caggggcaccagttaacatttccctt 18276802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 392184 - 392096
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||| | || ||||| |||||||||||||    
T  392184 aattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 392096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 3515854 - 3515764
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||||||||   || ||||| |||||||||||||||    
T  3515854 aattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccctgggggcaccggttagcatttccctt 3515764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 27433580 - 27433491
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||| ||||| |||||||| | || ||||| ||||||||||||||    
T  27433580 aattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 27433491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 29451213 - 29451301
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || ||||| | |  ||||||||||||||||||||    
T  29451213 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtgcc-cggaggcaccagttagcatttccct 29451301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 34396625 - 34396716
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || ||| |   || ||||| ||||||||||||||||    
T  34396625 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacctgtgtcctgggggcaccggttagcatttccctta 34396716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 34477648 - 34477711
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  34477648 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 34477711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 1391276 - 1391365
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||||||||  |||| || | |||||||| |||||||||||||||    
T  1391276 aattatacaatttcaatgcattaactactatataatttcctttttcatatccttaatcagtacc-ccggagcaccggttagcatttccctt 1391365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 7851257 - 7851347
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||||||||||| |||||||||| |||||||||||||  ||||||||||||||| ||||||||   || ||||| |||||||||||||||    
T  7851257 aattacacaattttaatgcattaattactatataattttctttttcatatccttaaccagtgccctgggggcaccggttagcatttccctt 7851347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 32929606 - 32929696
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||| ||||| ||| |||| | || ||||| |||||||||||||||    
T  32929606 aattacacaatttcaatgcattaattaatatataatttcctttttcatacccttaaccattgccccgggggcaccggttagcatttccctt 32929696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 13529543 - 13529454
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| ||||||| |||||||| |    |||| |||||||||||||||    
T  13529543 aattacacaatttcaatgcattaactactatataatttcctttttcacatccttaaccagtgccccgaaggcacaagttagcatttccct 13529454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 35043975 - 35043890
Alignment:
Q  4 tacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||| | |  |  ||||||||||||||||||    
T  35043975 tacacaatttcaatgaattaactactatataatttcttttttcatatccttaaccagtgtcccgtggacaccagttagcatttccc 35043890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12145215 - 12145303
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| | |||||    || ||||| |||||||||||||    
T  12145215 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaacaagtgcactgggggcaccggttagcatttccc 12145303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 34851947 - 34852030
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatt 85  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||| |||  ||||| | |||||||||| |||||||||    
T  34851947 aattacacaatttcaatgcattaactactatataatttcctttttcatatcttta-acagtgtcccaggagcaccggttagcatt 34852030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 3026107 - 3026195
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||| |||||||||||||||||| |||| ||||||||| ||||||||| ||||| |||||||  | || |||||||||||||||||||||    
T  3026107 aattatacaatttcaatgcattaactactgtataatttcatttttcatacccttaaccagtgc--ccggggcaccagttagcatttccctt 3026195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 4215783 - 4215692
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||||||||| || ||||||||||| |||||||||  |||| |||||||| | || ||||| |||| |||||||||||    
T  4215783 aattacacaatttcaatgcattaactattatataatttcctttttcatactcttaaccagtgccccgggggcaccggttaacatttccctta 4215692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 26467222 - 26467285
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| || |||||    
T  26467222 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccggtgcc 26467285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 31280409 - 31280320
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||   ||||  ||||||| | |||||||| ||||||||||||||    
T  31280409 aattatacaatttcaatgcattaactactatataatttcctttttcattctcttaatcagtgcctcgggagcaccggttagcatttccct 31280320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2581040 - 2580952
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||||| |||||||||||||||| |||||||||||||| ||||| ||||| ||| ||||| || || | ||||| |||||||||||||    
T  2581040 aattacataatttcaatgcattaactactatataatttccttttttatatcattaaccagtacctcaagggcaccggttagcatttccc 2580952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 12525807 - 12525717
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||||||| |||||||| ||||| |||||||||||||| ||||||||| ||||| ||||| || | |  ||||| |||||||||||||||    
T  12525807 aattacacattttcaatgtattaactactatataatttcctttttcatacccttaaccagtaccccggaggcaccggttagcatttccctt 12525717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25165511 - 25165565
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||  ||||| ||||||||||||||||||||||||||||||    
T  25165511 aattacacaatttcaatatattaactactatataatttcttttttcatatcctta 25165565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 9 - 89
Target Start/End: Original strand, 21878453 - 21878533
Alignment:
Q  9 aatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcagga-gcaccagttagcatttccc 89  Q
    |||||||||||||||| |||||||||||||| ||||||||||||||| || ||||| | ||| ||||| |||||||||||||    
T  21878453 aatttcaatgcattaactactatataatttcctttttcatatccttaacccgtgcc-cgggaggcaccggttagcatttccc 21878533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 28225308 - 28225221
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||||||||||||||| |||||| |||||||||| ||| ||||||||||||||| || ||  | |||  |||||||||||||||||||    
T  28225308 aattacacaatttcaatacattaattactatataa-ttcctttttcatatccttaacccgtatcccagaggcaccagttagcatttccc 28225221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 11115193 - 11115256
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    |||||||||||||||||| ||||| || ||||||||||| ||||| ||||||||| ||||||||    
T  11115193 aattacacaatttcaatgtattaactattatataatttccttttttatatccttaaccagtgcc 11115256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 13417060 - 13417123
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||||||||||||||| |||||| || ||||||||||| ||||||||||||||| | ||||||    
T  13417060 aattacacaatttcaatacattaactaatatataatttcctttttcatatccttaactagtgcc 13417123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 23629674 - 23629737
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||||||||||||||| |||||| |||||||||||||  |||||||||||||||  |||||||    
T  23629674 aattacacaatttcaatacattaactactatataattttctttttcatatccttaatcagtgcc 23629737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 32985291 - 32985354
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||| ||||||||| ||| ||||    
T  32985291 aattacacaatttcaatacattaactactatataatttccttttttatatccttaaccaatgcc 32985354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 1840345 - 1840407
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgc 63  Q
    ||||||||||||| ||| |||||| || ||||||||||||||||| ||||||||| |||||||    
T  1840345 aattacacaattttaatacattaattattatataatttctttttttatatccttaaccagtgc 1840407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 9661074 - 9661020
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||| |||||||||||||||||| || ||| |||||||||||||||||||||||    
T  9661074 aattatacaatttcaatgcattaactattatgtaatttcttttttcatatcctta 9661020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 29978319 - 29978266
Alignment:
Q  2 attacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||| ||||||||| |||||| |||||||||||||| |||||||||||||||    
T  29978319 attacataatttcaatacattaaatactatataatttcctttttcatatcctta 29978266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 961097 - 961051
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttca 47  Q
    ||||||||||||| |||||||||| |||||||||||||| |||||||    
T  961097 aattacacaattttaatgcattaactactatataatttcctttttca 961051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 10431824 - 10431780
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttctttttt 45  Q
    |||||||||||||||||| | ||| || |||||||||||||||||    
T  10431824 aattacacaatttcaatgtaataactattatataatttctttttt 10431780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 7e-27; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 10070057 - 10069964
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaat 94  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| | || ||||| ||||||||||||| ||||    
T  10070057 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttcccataat 10069964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 10054450 - 10054544
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaata 95  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||| ||||| |||||||| | || ||||| |||||||||||||||||||    
T  10054450 aattacacaatttcaatgcattaattattatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttcccttaata 10054544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 13661896 - 13661806
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||  | || ||||| |||||||||||||||    
T  13661896 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttccctt 13661806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 35132610 - 35132520
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| |||||| | | || ||||| |||||||||||||||    
T  35132610 aattacacaatttcaatgtattaactactatataatttcctttttcatatccttaaccagtgtcccgggggcaccggttagcatttccctt 35132520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 34650931 - 34651018
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||| | || ||||| |||||||||||||    
T  34650931 aattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgcc-cgggggcaccggttagcatttccc 34651018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 35504338 - 35504426
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||| | | || ||||| |||||||||||||    
T  35504338 aattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgtcccgggggcaccggttagcatttccc 35504426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 8787427 - 8787336
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| ||| |||| | ||  |||| ||||||||||||||||    
T  8787427 aattacacaatttcaatgcattaactactatataatttcatttttcatacccttaaccaatgccccggggacaccggttagcatttccctta 8787336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 4837345 - 4837254
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaa 93  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||| |||| || ||||| | || ||||| |||| ||||||||||||    
T  4837345 aattacacaatttcaatgcattaattactatataatttcctttttcatattcttaaccggtgcc-ccggggcaccggttaacatttcccttaa 4837254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 19647756 - 19647819
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  19647756 aattatacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 19647819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 13470239 - 13470149
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||| |||||||||||||||| | |||||||| ||||| ||||||||||||||| |||||||| ||   ||||| |||||||||||||||    
T  13470239 aattatacaatttcaatgcattgactactatattatttcctttttcatatccttaaccagtgccccataggcaccggttagcatttccctt 13470149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11958065 - 11958153
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||||||||||||| |||||||| |||||||||||||| ||||| ||||| ||| || ||||| | || ||||| |||||||||||||    
T  11958065 aattacacaatttcattgcattaactactatataatttccttttttatatctttaacctgtgccccgggggcaccggttagcatttccc 11958153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 12506384 - 12506296
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||  |||| | |||||  |||  ||||| |||||||||||||    
T  12506384 aattacacaatttcaatgcattaactactatataatttcctttttcatactcttaacgagtgctccagaggcaccggttagcatttccc 12506296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 39069468 - 39069377
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaa 93  Q
    ||||||||||||| |||||||||| ||||||||||||||  |||||||| ||||| ||||||||   | |||||| |||||||||||||||||    
T  39069468 aattacacaattttaatgcattaactactatataatttc-cttttcatacccttaaccagtgccctggaagcaccggttagcatttcccttaa 39069377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 6283650 - 6283548
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaataaattt 100  Q
    |||||||||||||||||||||||| || ||||||||||  ||||||||||| ||| | |||||| | |  ||||| ||||||||||||| || || ||||    
T  6283650 aattacacaatttcaatgcattaattattatataattttctttttcatatctttaactagtgccccggaggcaccggttagcatttcccatattatattt 6283551  T
Q  101 cat 103  Q
    |||    
T  6283550 cat 6283548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 20175315 - 20175222
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggag-caccagttagcatttcccttaat 94  Q
    |||||||||||||||||||||||| |||||||||||||||||||| ||||  ||| |||||| | | |||| |||| |||||||||||| |||||    
T  20175315 aattacacaatttcaatgcattaactactatataatttctttttttatatttttaaccagtgtctc-ggagacaccggttagcatttccattaat 20175222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21547492 - 21547546
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||||||    
T  21547492 aattacacaatttcaatgcattaactactatataatttccttttttatatcctta 21547546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 40564502 - 40564556
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||| |||||||    
T  40564502 aattacacaatttcaatgcattaactactatataatttcctttttcaaatcctta 40564556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9721705 - 9721765
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagt 61  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||||| |||| |||||    
T  9721705 aattaaacaatttcaatgcattaattactatataatttcctttttcatattcttaaccagt 9721765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 31909719 - 31909659
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagt 61  Q
    |||||||||||||||||||||||| ||||||||||||||  |||| ||||||||| |||||    
T  31909719 aattacacaatttcaatgcattaactactatataatttcccttttaatatccttaaccagt 31909659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11846160 - 11846106
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||| |||||||||    
T  11846160 aattacacaatttcaatgtattaactactatataatttccttttttatatcctta 11846106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2619655 - 2619742
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggag-caccagttagcatttcc 88  Q
    ||||||||||||||||| |||||| ||||| |||||||  ||||||||||||||| | |||| | | |||| |||||||||||||||||    
T  2619655 aattacacaatttcaatacattaactactaaataattttctttttcatatccttaacaagtgtc-ccggagacaccagttagcatttcc 2619742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 19436934 - 19436988
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||| ||||||||||||| ||||  ||||||||||||| |||||||||||||||    
T  19436934 aattatacaatttcaatgctttaaccactatataatttcctttttcatatcctta 19436988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40057395 - 40057341
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||| || ||||||||||| ||| |||||||||||||| |||||||||||||||    
T  40057395 aattatactatttcaatgcactaactactatataatttcctttttcatatcctta 40057341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 6284883 - 6284822
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtg 62  Q
    ||||| ||||||||||| |||||| |||||||||||||| |||||  |||||||| ||||||    
T  6284883 aattatacaatttcaatacattaattactatataatttcctttttagtatccttaaccagtg 6284822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 39067033 - 39067095
Alignment:
Q  1 aattacacaatttcaatgcattaagtact-atataatttcttttttcatatccttatccagtg 62  Q
    ||||||| |||||||||  ||||| || | |||||||||||||||||||||||||| ||||||    
T  39067033 aattacataatttcaatatattaactaattatataatttcttttttcatatccttaaccagtg 39067095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 6042145 - 6042209
Alignment:
Q  1 aattacacaattt-caatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||||||||||| ||||||| ||| ||||||||||||| ||||||  |||| ||| ||||||||    
T  6042145 aattacacaattttcaatgcaataattactatataattttttttttagtatctttaaccagtgcc 6042209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 7e-27; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 272308 - 272219
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| | || ||||| ||||||||||||||    
T  272308 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 272219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 48725359 - 48725271
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| | || ||||| |||||||||||||    
T  48725359 aattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggcaccggttagcatttccc 48725271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 18014760 - 18014670
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||||  ||||||| | || |||||||||||||||||||||    
T  18014760 aattacacaatttcaatgcattaactactatataatttactttttcatatccttaatcagtgccccgggggcaccagttagcatttccctt 18014670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 46352722 - 46352632
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| |||| ||||||||| ||||||||||||||| |||||||| | || ||||| |||||||||||||||    
T  46352722 aattacacaatttcaatgcattaactactgtataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccctt 46352632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 52520769 - 52520679
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||| | || ||||| |||||||||||||||    
T  52520769 aattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctt 52520679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 49893419 - 49893330
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||||| | || ||||| ||||||||||||||    
T  49893419 aattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccgggggcaccggttagcatttccct 49893330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 39074507 - 39074419
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||| | || ||||| |||||||||||||    
T  39074507 aattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccc 39074419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 13159985 - 13159894
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| | ||  || |||||||||| ||||||||||||||||    
T  13159985 aattacacaatttcaatgtattaactactatataatttcctttttcatatccttaactagaaccccaggagcaccggttagcatttccctta 13159894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 42964347 - 42964434
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcc 88  Q
    |||||||||||||||||||||||| ||||||| |||||| ||||||||||||||| |||||||| | | ||||||||||| |||||||    
T  42964347 aattacacaatttcaatgcattaactactataaaatttcatttttcatatccttaaccagtgccccggaagcaccagttaacatttcc 42964434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 41554038 - 41554122
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcattt 86  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||| | | || ||||||||||||||||    
T  41554038 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtg-caccggggcaccagttagcattt 41554122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 20924080 - 20923992
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||| ||||| |||||||| | | |||||| |||||||||||||    
T  20924080 aattacacaatttcaatgaattaactactatataatttcctttttcatacccttaaccagtgccccggaagcaccggttagcatttccc 20923992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 28139397 - 28139309
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||| |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||| |   || |||||||||||||||||||    
T  28139397 aattatacaatttcaatgcattaactactatttaatttcttttttcatatccttaaccagtgtcttgggggcaccagttagcatttccc 28139309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 52246670 - 52246582
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||| ||||||||||||||||||  ||||||||||||| ||||||||||||||| |||||||| | |  |||||||||||||||||||    
T  52246670 aattatacaatttcaatgcattaacaactatataatttcatttttcatatccttaaccagtgccccggaggcaccagttagcatttccc 52246582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 40362678 - 40362768
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||  ||||||| | |  ||||  |||||||||||||||    
T  40362678 aattacacaattttaatgcattaactactatataatttcttttttcatatccttaatcagtgccccggaggcacgggttagcatttccctt 40362768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43786959 - 43786871
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| | ||| |||||||| | |  ||||| |||||||||||||    
T  43786959 aattacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtgccccggaggcaccggttagcatttccc 43786871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 858677 - 858586
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| | |||||    || ||||| ||| ||||||||||||    
T  858677 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaactagtgcactgggggcaccggtttgcatttccctta 858586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 41304087 - 41304004
Alignment:
Q  7 acaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||| |||||||||||||| ||||||||||||||| ||| |||| | |  ||||| ||||||||||||||    
T  41304087 acaatttcaatgcattaattactatataatttcctttttcatatccttaaccactgccccggaggcaccggttagcatttccct 41304004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 50359284 - 50359368
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcattt 86  Q
    |||||| ||||||||||||||||| ||||||||||||| ||||||| || ||||| |||||||| | || ||||||||||||||||    
T  50359284 aattacccaatttcaatgcattaactactatataattttttttttcttaaccttaaccagtgccac-ggggcaccagttagcattt 50359368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 2505437 - 2505350
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||| ||| |||||||||||||| ||||||||||| ||| ||| || | |||||||| | |||||||||||||    
T  2505437 aattacacaatttcaatgcactaactactatataatttcctttttcatatctttaaccaatgtc-caggagcagcggttagcatttccc 2505350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 4168271 - 4168183
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||| ||||||||| ||||| || | |  ||||| |||||||||||||    
T  4168271 aattacacaatttcaatacattaactactatataatttccttttttatatccttaaccagttccccggaggcaccggttagcatttccc 4168183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 2119519 - 2119456
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    |||||| ||||||||||||||||| |||||||||||||| ||||||||||| ||| ||||||||    
T  2119519 aattactcaatttcaatgcattaactactatataatttcctttttcatatctttaaccagtgcc 2119456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 42548183 - 42548120
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||| |||  |||||||    
T  42548183 aattacataatttcaatgcattaactactatataatttcttttttcatatctttaagcagtgcc 42548120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 53489922 - 53489985
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||| ||||| ||||||||    
T  53489922 aattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgcc 53489985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 2391688 - 2391627
Alignment:
Q  8 caatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcagg 69  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||| |||||||| ||||    
T  2391688 caatttcaatgcattaactactatataatttcctttttcttatccttaaccagtgccccagg 2391627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 69
Target Start/End: Complemental strand, 2393449 - 2393388
Alignment:
Q  8 caatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcagg 69  Q
    ||||||||||||||||| |||||||||||||| |||||| |||||||| |||||||| ||||    
T  2393449 caatttcaatgcattaactactatataatttcctttttcttatccttaaccagtgccccagg 2393388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 7468499 - 7468438
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtg 62  Q
    ||||| |||||||||||||||||| |||||||||||||| |||||||| |||||| ||||||    
T  7468499 aattatacaatttcaatgcattaactactatataatttcctttttcatttccttaaccagtg 7468438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 22248974 - 22248911
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||||||||||||||| || ||| |||||||||||||| ||||||||||||||| | ||||||    
T  22248974 aattacacaatttcaatacaataactactatataatttcctttttcatatccttaactagtgcc 22248911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 52718252 - 52718166
Alignment:
Q  4 tacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||| |||| ||||| |||||||||||||| ||||||||||||||| |||||| | | ||||||||  |||| |||||||||    
T  52718252 tacacaattttaatgtattaactactatataatttcctttttcatatccttaaccagtgtc-cgggagcaccgattagtatttccctt 52718166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 10617382 - 10617436
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||| |||||||||    
T  10617382 aattacacaattttaatgcattaactactatataatttccttttttatatcctta 10617436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 29241725 - 29241671
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||    
T  29241725 aattacataatttcaatgcattaactactatataatttccattttcatatcctta 29241671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 43269837 - 43269899
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgc 63  Q
    ||||||| |||||||||||||||| |||||| |||||||  |||||||||||||| |||||||    
T  43269837 aattacataatttcaatgcattaactactatgtaatttcccttttcatatccttaaccagtgc 43269899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 89
Target Start/End: Complemental strand, 23925359 - 23925280
Alignment:
Q  10 atttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||| |||||||||| |||||||||||||| ||||| |||| |||| ||||| || | || | |||||||||||||||||    
T  23925359 attttaatgcattaattactatataatttccttttttatattcttaaccagttccccgggggtaccagttagcatttccc 23925280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 11308308 - 11308398
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||  ||||||||||||||| || ||||||||||| ||||||| |||||||  ||||| | | | | |||| |||||||||||||||    
T  11308308 aattacattatttcaatgcattaactattatataatttcctttttcacatccttaatcagtgtcccggaaacaccggttagcatttccctt 11308398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 41993717 - 41993771
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||||| |||||||||||||||| |||||||||||||| ||||| |||| ||||    
T  41993717 aattacataatttcaatgcattaactactatataatttcatttttaatatactta 41993771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 50395660 - 50395742
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagca 83  Q
    |||||||||||||| ||||||||| |||| ||||||||  |||||||||||| || |||||| | | || ||||| |||||||    
T  50395660 aattacacaatttctatgcattaactactgtataattttctttttcatatccctaaccagtgtcccgggggcaccggttagca 50395742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 2362861 - 2362801
Alignment:
Q  29 tatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||||||||| ||||||||||||||| ||| |||  | |||||||| |||||||||||||    
T  2362861 tatataatttcctttttcatatccttaaccattgcaccgggagcaccggttagcatttccc 2362801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 81
Target Start/End: Original strand, 2938142 - 2938217
Alignment:
Q  5 acacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttag 81  Q
    ||||||||||| |||||||| |||||||||||||  ||||| ||||| ||| ||||| || |||| |||||||||||    
T  2938142 acacaatttcagtgcattaactactatataattttcttttttatatctttaaccagtacc-caggggcaccagttag 2938217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 38852305 - 38852248
Alignment:
Q  1 aattacacaatttcaatgcatta---agtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||||||||   | |||||||||||||| ||||| |||||||||    
T  38852305 aattacacaatttcaatgcattaattactactatataatttcattttttatatcctta 38852248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 31514879 - 31514829
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatc 51  Q
    ||||||||||||| ||| |||||| |||||||||||||  |||||||||||    
T  31514879 aattacacaattttaatacattaactactatataattttatttttcatatc 31514829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 50299043 - 50299080
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataattt 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  50299043 aattacacaatttcagtgcattaactactatataattt 50299080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 24488454 - 24488386
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcagg 69  Q
    |||||||| ||||| ||||||||| || ||||||||||| ||||| | || |||| |||||||| ||||    
T  24488454 aattacactatttccatgcattaactattatataatttccttttttacattcttaaccagtgccccagg 24488386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 33140973 - 33140937
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatt 37  Q
    ||||| |||||||||||||||||| ||||||||||||    
T  33140973 aattatacaatttcaatgcattaactactatataatt 33140937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 49529364 - 49529430
Alignment:
Q  1 aattacacaatttcaatgcattaagtac---tatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||||| |||||||||||||||| |||   ||||||||||  |||||||||||||||  |||||||    
T  49529364 aattacataatttcaatgcattaactactagtatataattttctttttcatatccttaatcagtgcc 49529430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 7e-27; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 15227827 - 15227734
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaat 94  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| | || | ||| ||||||||||||||||||    
T  15227827 aattacacaatttcaatgcattaattactatataatttcctttttcatatccttaaccagtgcccccggggtaccggttagcatttcccttaat 15227734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 9266826 - 9266917
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||||| ||  |||| |||| |||||||||||    
T  9266826 aattacacaatttcaatgcattaaatactatataatttcctttttcatatccttaaccagtgccgcggggacaccggttaacatttccctta 9266917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 30657696 - 30657606
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||||| |||| | |||||| | |||||||| |||||||||||||||    
T  30657696 aattacataatttcaatgcattaactactatataatttcttttttcatatgcttaactagtgccccgggagcaccggttagcatttccctt 30657606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 17333380 - 17333467
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| | || ||||| |||||||||||||    
T  17333380 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc-cgggggcaccggttagcatttccc 17333467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 42770088 - 42770180
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaa 93  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| | ||| |||||||| | || ||||| |||||||||||||||||    
T  42770088 aattacacaatttcaatgcattaactactatataatttcctttttcataccattaaccagtgccccgggggcaccggttagcatttcccttaa 42770180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 29210501 - 29210412
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||| | |  ||||| ||||||||||||||    
T  29210501 aattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttccct 29210412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 29657859 - 29657770
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||| ||||||||| |||||||| | || ||||| ||||||||||||||    
T  29657859 aattatacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccccgggggcaccggttagcatttccct 29657770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 24178561 - 24178649
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||||||| |||||||| | || ||| | |||||||||||||    
T  24178561 aattacacaatttcaatgcattaactattatataatttcctttttcatatccttaaccagtgccccgggggcatcggttagcatttccc 24178649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 3784811 - 3784873
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgc 63  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||    
T  3784811 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgc 3784873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 12072160 - 12072250
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||||||||||||| || ||||| | || ||||| |||||||||| ||||    
T  12072160 aattacacaatttcaatgcattaactactacataatttcctttttcatatccttaaccggtgccccgggggcaccggttagcattttcctt 12072250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 18043250 - 18043160
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||| ||||| |||||||| | |  ||||| |||||||||||||||    
T  18043250 aattacacaatttcaatgcattaactactatataatttccttttttatacccttaaccagtgccccggaggcaccggttagcatttccctt 18043160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 38702031 - 38702117
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttc 87  Q
    ||||||| |||||||||||||||| ||||||||| |||| ||||||||| ||||| |||||||| | |||||||| |||||||||||    
T  38702031 aattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccccgggagcaccggttagcatttc 38702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 13961299 - 13961211
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| ||||||||||||| |||||| ||||||||| || ||||| | || ||||| ||||||||||||||    
T  13961299 aattacacaatttcaatgcattaactactatataattt-tttttttatatccttaacccgtgccccgggggcaccggttagcatttccct 13961211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 19031913 - 19032002
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    ||||||||||||||||||  |||| |||||||||||||| ||||||||||||||| | | |||| | |||||||| ||||||||||||||    
T  19031913 aattacacaatttcaatgttttaactactatataatttcctttttcatatccttaactaatgcccccggagcaccggttagcatttccct 19032002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 5694409 - 5694321
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| ||||||||||||||  |||| ||||||||| |||||||| | |  ||||| |||||||||||||    
T  5694409 aattacacaatttcaatgcattaactactatataatttccctttttatatccttaaccagtgccccggaggcaccggttagcatttccc 5694321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30294479 - 30294533
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||    
T  30294479 aattacacaatttcaatgcattaactactatataatttcctttttcatatcctta 30294533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 36446423 - 36446508
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttc 87  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||| |||| |||||||| | || |||||||||| ||||||    
T  36446423 aattacacaatttcaatgcattaactactatataatttccttttt-atattcttaaccagtgcctcgggggcaccagttaacatttc 36446508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 47010081 - 47010019
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgc 63  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||||||||||||| |||||||    
T  47010081 aattacacaatttcaatacattaactactatataatttcctttttcatatccttaaccagtgc 47010019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 51065846 - 51065936
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||||||||||||||| |||||| |||||||||||||  ||||||||||||||| |||||| | | ||  |||| |||||||||||||||    
T  51065846 aattacacaatttcaatacattaactactatataatttactttttcatatccttaaccagtgtcccggggacaccggttagcatttccctt 51065936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 48071570 - 48071482
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| || ||||||||||| |||| |||||||||| ||||| || | |||||| | ||||||||||||||    
T  48071570 aattacacaatttcaatgcattaactattatataatttccttttacatatccttaaccagtacc-ccggagcatcggttagcatttccct 48071482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3097747 - 3097659
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||||| |||||||||||||||| |||||||||||||| ||||||||||||||| ||||  |  | || |||||| ||||||||||||    
T  3097747 aattacataatttcaatgcattaactactatataatttcctttttcatatccttaaccaggactccgggggcaccaattagcatttccc 3097659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 14350375 - 14350467
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaa 93  Q
    ||||||||||||| |||||||||| ||| |||||||||| ||||||||| ||||| || ||||  | || ||||| |||||||||||||||||    
T  14350375 aattacacaattttaatgcattaactacaatataatttcctttttcatacccttaaccggtgctccgggggcaccggttagcatttcccttaa 14350467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38162938 - 38162850
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||| ||||| |||||||| | |  ||||| |||| ||||||||    
T  38162938 aattacacaatttcaatgcattaactactatataattttctttttcatacccttaaccagtgccccggaggcaccggttaacatttccc 38162850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 38335257 - 38335170
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||| |||||| | || || |||| |||||||||||||    
T  38335257 aattacacaattacaatgcattaattactatataatttcctttttcatatctttaaccagtgtcccaaga-caccggttagcatttccc 38335170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 29683284 - 29683193
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataattt-cttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||| || ||||||||||||||| ||||||||||||| ||||||| ||||| ||| |||||||| | || ||||| |||||||||||||||    
T  29683284 aattatacgatttcaatgcattaactactatataatttcctttttttatatctttaaccagtgccccgggggcaccggttagcatttccctt 29683193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6770425 - 6770371
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  6770425 aattacacaatttcaatacattaactactatataatttcctttttcatatcctta 6770371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 23473562 - 23473648
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttc 87  Q
    ||||| ||||||||||| |||||| | ||||||||| || ||||||||||||||| ||| |||| |||| ||| |||||||||||||    
T  23473562 aattatacaatttcaatacattaactgctatataatctcctttttcatatccttaaccaatgccccaggggcatcagttagcatttc 23473648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35985719 - 35985773
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| |||||||||    
T  35985719 aattacacaatttcaatgcattaactactatataatttccttttttatatcctta 35985773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45431366 - 45431312
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  45431366 aattacacaatttcaatacattaactactatataatttcctttttcatatcctta 45431312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 47532768 - 47532822
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||||||||| |||||||||||||  |||||||||||||||    
T  47532768 aattacacaatttcaatgcattaactactatataattttctttttcatatcctta 47532822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 51368886 - 51368943
Alignment:
Q  4 tacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagt 61  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||    
T  51368886 tacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagt 51368943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 26228281 - 26228219
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgc 63  Q
    ||||||| |||||||||||||||| |||||||||||||| ||||| || |||||| |||||||    
T  26228281 aattacataatttcaatgcattaactactatataatttcattttttatctccttaaccagtgc 26228219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 50128270 - 50128324
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||||||||| |||||| ||||||  |||||||||||||||    
T  50128270 aattacacaatttcaatgcattaactactatgtaattttctttttcatatcctta 50128324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Original strand, 19011108 - 19011180
Alignment:
Q  15 aatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcc 88  Q
    |||||||||| |||||||||||||| ||||||||||||||| || ||||| | ||| |||| ||||||||||||    
T  19011108 aatgcattaactactatataatttcctttttcatatccttaacccgtgccccggga-caccggttagcatttcc 19011180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 15282612 - 15282672
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagt 61  Q
    |||||||||||||||||  ||||| |||||||||||||  ||||||||||||||| |||||    
T  15282612 aattacacaatttcaatatattaactactatataattttctttttcatatccttaaccagt 15282672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 41730396 - 41730302
Alignment:
Q  1 aattacacaatttcaatgcattaagtacta---tataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    ||||| |||||||||||||||||| |||||   |||||||||||||||||||| |||| || ||||| | || ||||| ||||  ||||||||||    
T  41730396 aattaaacaatttcaatgcattaattactactatataatttcttttttcatattcttaacccgtgcccctggggcaccggttaagatttccctta 41730302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 52431669 - 52431625
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttctttttt 45  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  52431669 aattacacaatttcaatgcattaactactatataatttttttttt 52431625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8473012 - 8473066
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||||||||||| |||||||||| || ||||||||||| ||||| |||||||||    
T  8473012 aattacacaattttaatgcattaactattatataatttccttttttatatcctta 8473066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 43286810 - 43286720
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||||| ||||||||  |||||| || ||||||||||| ||||||||||||||| |||||| | ||||  || | |||||||||| ||||    
T  43286810 aattacataatttcaaaacattaactattatataatttcctttttcatatccttaaccagtgtcccagggacatcggttagcattttcctt 43286720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 28726013 - 28726097
Alignment:
Q  11 tttcaatgcattaagtactatataatttcttttttcat-atccttatccagtgccgcaggagcaccagttagcatttcccttaat 94  Q
    |||||||||| ||| ||  |||||||||| ||||| || ||||||| |||||||| | || ||||| ||||||||||||||||||    
T  28726013 tttcaatgcaataattaacatataatttccttttttattatccttaaccagtgccccgggggcaccggttagcatttcccttaat 28726097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 35700748 - 35700808
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagt 61  Q
    |||||||||||||||||| ||||| |||| ||||||||| |||||  |||||||| |||||    
T  35700748 aattacacaatttcaatgtattaactactgtataatttcctttttagtatccttaaccagt 35700808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 37315365 - 37315409
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttctttttt 45  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||    
T  37315365 aattacataatttcaatgcattaactactatataatttccttttt 37315409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 9 - 64
Target Start/End: Original strand, 10976008 - 10976063
Alignment:
Q  9 aatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||| |||||||||| ||||||||||| || ||||||||||||||| | ||||||    
T  10976008 aattttaatgcattaactactatataatctcctttttcatatccttaacaagtgcc 10976063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 28481928 - 28481844
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||||||||||| |||||||||    || ||||||||| ||||||||||||||| |||| |||  ||  ||||| |||||||||||||    
T  28481928 aattacacaattttaatgcatta----ctgtataatttcctttttcatatccttaaccagggcccaagaggcaccggttagcatttccc 28481844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 39912381 - 39912440
Alignment:
Q  5 acacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    |||||||||||||||||||| || |||||||||||  |||| |||||||||  |||||||    
T  39912381 acacaatttcaatgcattaactagtatataatttccctttttatatccttaatcagtgcc 39912440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 12307005 - 12306916
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||| ||||| ||| |||||||||  |||||| |||| ||| | || ||| |||  ||||| |||||||||||||||    
T  12307005 aattacacaatttcaatgtattaactac-atataattttctttttcgtatcattaactagagccccagaggcaccggttagcatttccctt 12306916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37503302 - 37503264
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttc 39  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  37503302 aattacacaatttcaatgtattaactactatataatttc 37503264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 39497387 - 39497341
Alignment:
Q  9 aatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||| |||||||||| |||||||||||||  |||||||||||||||    
T  39497387 aattttaatgcattaactactatataattttctttttcatatcctta 39497341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 3838875 - 3838936
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtg 62  Q
    ||||||||||||| |||||||||| || ||||||||||| |||||  ||| |||| ||||||    
T  3838875 aattacacaattttaatgcattaactattatataatttcctttttagtatgcttaaccagtg 3838936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 49867518 - 49867453
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataa-tttcttttttcatatccttatccagtgccg 65  Q
    ||||||||||||||||  |||||| |||||||||| ||||||||||  |||| ||| |||||||||    
T  49867518 aattacacaatttcaaaacattaattactatataactttcttttttagtatcattaaccagtgccg 49867453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 7 - 64
Target Start/End: Complemental strand, 52749684 - 52749627
Alignment:
Q  7 acaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||||||||| |||||| || ||||||||||| ||||||||||| ||| ||| ||||    
T  52749684 acaatttcaatacattaactattatataatttcctttttcatatctttaaccaatgcc 52749627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 32217133 - 32217045
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| |||||||| | || |||||||||||||||||||    
T  32217133 aattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgccccgggggcaccagttagcatttccc 32217045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 29591274 - 29591187
Alignment:
Q  4 tacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||||||||||||||||||| |||||||||||||| || ||||||| |||| |||||||| | || |||||||||||||||||||||    
T  29591274 tacacaatttcaatgcattaactactatataatttccttattcatattcttaaccagtgccccgggggcaccagttagcatttccctt 29591187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 43944595 - 43944504
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| |||||||| | |  ||||| ||||||||||||||||    
T  43944595 aattacacaatttcaatgcattaactactatataatttcctttttcatacccttaaccagtgccccggaggcaccggttagcatttccctta 43944504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 789628 - 789718
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| ||||| || ||||| | || ||||| |||||||||||||||    
T  789628 aattacacaatttcaatgcattaactactatataatttcctttttcatacccttaacccgtgccccgggggcaccggttagcatttccctt 789718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 15186331 - 15186241
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||| ||||| |||||||| | || ||||| |||||||||||||||    
T  15186331 aattacacaatttcaatggattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccctt 15186241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 4089230 - 4089141
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||| |||||  ||||||| |||| ||||| ||||||||||||||    
T  4089230 aattacacaatttcaatgcattaactactatataattttctttttcatacccttaatcagtgccccaggggcaccggttagcatttccct 4089141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 18067977 - 18068066
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||| ||||| |||||||| | || ||||| ||||||||||||||    
T  18067977 aattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 18068066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 16536136 - 16536044
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaa 93  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||| |||||  | ||||| | || ||||| |||||||||||||||||    
T  16536136 aattacacaatttcaatgcattaactactatataatttcctttttcatacccttaatccgtgccccgggggcaccggttagcatttcccttaa 16536044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 24679740 - 24679827
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||||||||||||||| |||||| |||||||||||||||||||||||||||||| |||||||| |  || |||| |||||||||||||    
T  24679740 aattacacaatttcaatacattaactactatataatttcttttttcatatccttaaccagtgccccgaga-caccggttagcatttccc 24679827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 28755708 - 28755621
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||||||| | ||  |||| |||||||||||||    
T  28755708 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc-ctgggacaccggttagcatttccc 28755621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 43202481 - 43202573
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaa 93  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||| ||||| | |||||| | || ||||| |||||||||||||||||    
T  43202481 aattacacaattttaatgcattaattactatataatttcctttttcatacccttaactagtgccccgggggcaccggttagcatttcccttaa 43202573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 54054636 - 54054548
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||| ||||||||||||||| || ||||||||||||||||||||||||||| || ||||| | || ||||| |||||||||||||    
T  54054636 aattacactatttcaatgcattaactattatataatttcttttttcatatccttaaccggtgcccccggggcaccggttagcatttccc 54054548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 54655974 - 54656062
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||| ||||||||| |||||||| | ||| ||||||||| ||||||||    
T  54655974 aattacacaatttcaatacattaactactatataatttccttttttatatccttaaccagtgcccccggaacaccagttaacatttccc 54656062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 54897396 - 54897308
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||| |||||||| | || ||||| |||||||||||||    
T  54897396 aattatacaatttcaatgcattaactactatataatttcctttctcatatccttaaccagtgccccgggggcaccggttagcatttccc 54897308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 6164181 - 6164092
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||||||||| ||||||||||||| | |||| ||||||||| |||||||| || ||||||| |||| ||||||||||    
T  6164181 aattacacaatttcaatgcattaactactatataattt-tcttttgatatccttaaccagtgccccaagagcaccggttatcatttccctt 6164092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 86
Target Start/End: Complemental strand, 50619171 - 50619089
Alignment:
Q  4 tacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcattt 86  Q
    ||||||||||||||||||||| |||||||||||||  |||||||||| ||||  ||||||| | |||||||||||||||||||    
T  50619171 tacacaatttcaatgcattaactactatataattttctttttcatattcttaatcagtgccccgggagcaccagttagcattt 50619089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 4268920 - 4269009
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    ||||||| |||||||||||||||| ||||||||| |||| ||||||||| ||||| |||||||| | || ||||| ||||||||||||||    
T  4268920 aattacataatttcaatgcattaactactatatagtttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 4269009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 92
Target Start/End: Complemental strand, 12356324 - 12356241
Alignment:
Q  9 aatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||| ||||| |||||||||||||| ||||||||||||||| |||||  | |||| ||||| ||||||||||||||||    
T  12356324 aatttcaatgtattaactactatataatttcctttttcatatccttaaccagtatctcaggggcaccggttagcatttccctta 12356241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 19503203 - 19503289
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcc 88  Q
    |||||||||||||||||| ||||| || ||||||||||| ||||||||||||||| ||||| || | |||||||| ||||||||||||    
T  19503203 aattacacaatttcaatgtattaactagtatataatttcctttttcatatccttaaccagtacc-cgggagcaccggttagcatttcc 19503289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 42898844 - 42898907
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||||||    
T  42898844 aattacacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtgcc 42898907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 46688303 - 46688399
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataattt-cttt----tttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||||||||| |||| |||||||| ||||    ||||||||||||| |||||||| | || ||||||||||||||||||||||    
T  46688303 aattacacaatttcaatgcattaactactgtataattttctttaatttttcatatccttaaccagtgcctcgggggcaccagttagcatttccctta 46688399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 7769026 - 7768936
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||||||| ||||| |||||||| | || | |||  ||||||||||||||    
T  7769026 aattacacaatttcaatacattaactactatataatttcctttttcatacccttaaccagtgccccgggggtaccgattagcatttccctt 7768936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 55882771 - 55882683
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggag-caccagttagcatttccct 90  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||| | |||||| | |||| |||| ||||||||||||||    
T  55882771 aattacacaatttcaatgcattaattactatataattt-ttttttcatatccttaacgagtgcc-ccggagacaccggttagcatttccct 55882683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 32202578 - 32202666
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||||||||||||||| |||||||||||||| ||||| ||||||||| || ||||| | ||  |||| |||| ||||||||    
T  32202578 aattacacaatttcaatgcattaactactatataatttccttttttatatccttaacccgtgccccggggacaccggttaacatttccc 32202666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 37988023 - 37987932
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaa 93  Q
    ||||||||||||||||| |||||| |||||||||||||| ||||||||| ||||| ||| | || | |||||||| |||| ||||||||||||    
T  37988023 aattacacaatttcaatacattaactactatataatttcctttttcatacccttaaccattacc-ctggagcaccggttaacatttcccttaa 37987932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 54945876 - 54945939
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||||||||||||||| |||||| | |||||||||||| ||||||||||||||| ||||||||    
T  54945876 aattacacaatttcaatacattaactgctatataatttcctttttcatatccttaaccagtgcc 54945939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 4220283 - 4220229
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||||||||||||||| |||||| |||||||||||||| |||||||||||||||    
T  4220283 aattacacaatttcaatacattaactactatataatttcctttttcatatcctta 4220229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 39843995 - 39843941
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||||| |||||||||||||||| |||||||||||||| |||||||||||||||    
T  39843995 aattacataatttcaatgcattaactactatataatttcatttttcatatcctta 39843941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 47231970 - 47232060
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||  ||||||||||||||| || ||||||||||| ||||||| ||||||| |||||||  | || ||||| |||||||||||||||    
T  47231970 aattacattatttcaatgcattaactattatataatttcctttttcacatccttaaccagtgctccgggggcaccggttagcatttccctt 47232060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 53655976 - 53656030
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||||||||||||||| |||||| || |||||||||||||||||||||||||||    
T  53655976 aattacacaatttcaatacattaactattatataatttcttttttcatatcctta 53656030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36395187 - 36395138
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatat 50  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  36395187 aattacacaatttcaatgcattaactactatataatttcctttttcatat 36395138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 46149027 - 46148938
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||| ||||| || ||||||||||| |||||||||| |||||| | |||  | || ||||| ||||||||||||||||    
T  46149027 aattacacaatttcaatgtattaattattatataatttcctttttcatattcttatcaaatgc--ccggggcaccggttagcatttccctta 46148938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 50167677 - 50167590
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| |||  ||||||||  ||||||||||| ||| |||||||| |  || |||| ||||||||||||||    
T  50167677 aattacacaatttcaatgcattaactac--tataattttctttttcatatctttaaccagtgccccgagaacaccggttagcatttccct 50167590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 49915247 - 49915158
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    ||||||||||||||||| |||||| |||||||||| ||  |||||||||||||||  ||||||  |||| || || ||| ||||||||||    
T  49915247 aattacacaatttcaatacattaattactatataaatttctttttcatatccttaatcagtgcaccaggggcgccggtttgcatttccct 49915158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3783599 - 3783687
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||| ||||||| |||||||||| |||||||||||||| ||||||||||  ||| || ||||| | |  ||||| |||||||||||||    
T  3783599 aattaaacaattttaatgcattaactactatataatttcatttttcatatgtttaaccggtgccccggaggcaccggttagcatttccc 3783687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 5091708 - 5091800
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaa 93  Q
    ||||||||||||| |||  ||||| || ||||||||||  |||||||||| |||| |||||||| | |||| ||| ||||| |||||||||||    
T  5091708 aattacacaattttaatatattaattattatataattttatttttcatattcttaaccagtgccccgggagtaccggttagtatttcccttaa 5091800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 30387232 - 30387271
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttct 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  30387232 aattacacaatttcaatgcattaactactatataatttct 30387271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 33108771 - 33108861
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    ||||| || ||||||||||||||| || ||||||||||| |||||||||| |||| |||||||| | |  ||||| |||| |||||||||||    
T  33108771 aattatactatttcaatgcattaactattatataatttcctttttcatat-cttaaccagtgccccggaggcaccggttaacatttccctta 33108861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30154261 - 30154311
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatc 51  Q
    ||||||| ||||||||| |||||| |||||||||||||| |||||||||||    
T  30154261 aattacataatttcaatacattaactactatataatttcctttttcatatc 30154311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 52533890 - 52533944
Alignment:
Q  8 caatttcaatgcattaagtactatataatttcttttttcatatccttatccagtg 62  Q
    |||||||| |||||||| |||||||||||||| |||||||||| |||| ||||||    
T  52533890 caatttcagtgcattaactactatataatttcctttttcatattcttaaccagtg 52533944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 42815197 - 42815113
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcattt 86  Q
    ||||||| ||||||||| |||||| ||  |||||||||| ||||||||||||||| ||||| |  || ||||||| ||||||||||    
T  42815197 aattacataatttcaatacattaactatgatataatttcctttttcatatccttaaccagtactcca-gagcaccggttagcattt 42815113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 53268808 - 53268764
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttctttttt 45  Q
    ||||||||||||| |||||||||| || |||||||||||||||||    
T  53268808 aattacacaattttaatgcattaactaatatataatttctttttt 53268764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 64
Target Start/End: Original strand, 1432653 - 1432703
Alignment:
Q  14 caatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||| ||||| || ||||||||||| ||||||||||||||| ||||||||    
T  1432653 caatgtattaactattatataatttcctttttcatatccttaaccagtgcc 1432703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 41265547 - 41265510
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataattt 38  Q
    ||||||||||||||| |||||||| |||||||||||||    
T  41265547 aattacacaatttcactgcattaactactatataattt 41265510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 50603315 - 50603254
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtg 62  Q
    |||||||||||||||||||||||| || |||| |||||| |||| || | ||||| ||||||    
T  50603315 aattacacaatttcaatgcattaattattatacaatttccttttccacacccttaaccagtg 50603254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 6208 - 6295
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcc 88  Q
    |||||||||||| ||||||||||| ||||||||| |||| ||||||||||||||| |||||||| |||| ||||| ||||||||||||    
T  6208 aattacacaattccaatgcattaactactatatagtttcctttttcatatccttaaccagtgccccaggggcaccggttagcatttcc 6295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 147003 - 147094
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| | ||  || |||||||||| ||||||||||||||||    
T  147003 aattacacaatttcaatgtattaactactatataatttcctttttcatatccttaactagaaccccaggagcaccggttagcatttccctta 147094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0264 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 23049 - 22959
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctt 91  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||||||||||||| |||||||  | || ||||| |||||||||||||||    
T  23049 aattacacaatttcaatgtattaattactatataatttcctttttcatatccttaaccagtgctccgggggcaccggttagcatttccctt 22959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 53783 - 53872
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||| ||||| |||||||| | || ||||| ||||||||||||||    
T  53783 aattacacaattttaatgcattaactactatataatttcctttttcatacccttaaccagtgccccgggggcaccggttagcatttccct 53872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 116292 - 116200
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaa 93  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| || ||||| | || ||||| |||||||||| ||||||    
T  116292 aattacacaatttcaatgcattaactactatataatttcctttttcatatctttaacctgtgccccgggggcaccggttagcattttccttaa 116200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 7995 - 8058
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  7995 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 8058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0549 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 7376 - 7313
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||||    
T  7376 aattacacaatttcaatgcattaactactatataatttcctttttcatatccttaaccagtgcc 7313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 11068 - 11155
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    |||||||||||||||||||||||| || ||||||||||| ||||||||||||||| ||||||   | || ||||||||||||||||||||    
T  11068 aattacacaatttcaatgcattaactaatatataatttcctttttcatatccttaaccagtg--tccggggcaccagttagcatttccct 11155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 913 - 820
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttcccttaat 94  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||||||||| | |||||  | | |||||| | ||||||||||| ||||    
T  913 aattacacaatttcaatgcattaactactatataattttctttttcatatccttaactagtgctccggaagcaccggctagcatttcccataat 820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 14981 - 14896
Alignment:
Q  4 tacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    |||||||||||| |||||||| |||||||||||||||||||| ||||| ||| |||||||| | ||  |||| |||||||||||||    
T  14981 tacacaatttcagtgcattaactactatataatttctttttttatatctttaaccagtgccccggggacaccggttagcatttccc 14896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 19684 - 19737
Alignment:
Q  2 attacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||||||||||||||||||||| || |||||||||||||||||||||| ||||    
T  19684 attacacaatttcaatgcattaattattatataatttcttttttcatatgctta 19737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 53444 - 53505
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtg 62  Q
    ||||| |||||||||||||||||| |||||||||||||| ||||| ||||||||| ||||||    
T  53444 aattatacaatttcaatgcattaactactatataatttccttttttatatccttaaccagtg 53505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 50636 - 50548
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||| ||||||||||  |||||| |||||||||||||| ||||||||||| ||| |||||||| | |  ||||| |||| ||||||||    
T  50636 aattatacaatttcaaaacattaactactatataatttcctttttcatatctttaaccagtgccccggaggcaccggttaacatttccc 50548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 379 - 292
Alignment:
Q  2 attacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccct 90  Q
    ||||||||||||||||||||||| || ||||||||||  |||||||||| |||| |||||||| | || ||||| ||||| ||||||||    
T  379 attacacaatttcaatgcattaactattatataattttctttttcatatgcttaaccagtgcc-ctggggcaccggttaggatttccct 292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 25806 - 25719
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccc 89  Q
    ||||||||||||||||| |||||| |||||||||| ||| ||||||||||||||| || ||  | |||  |||||||||||||||||||    
T  25806 aattacacaatttcaatacattaattactatataa-ttcctttttcatatccttaacccgtatcccagaggcaccagttagcatttccc 25719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 95682 - 95773
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgccgcaggagcaccagttagcatttccctta 92  Q
    ||||||| ||||||||| |||||| || ||||||||||| |||||||||| |||| ||||| || | || ||||| |||||||||| |||||    
T  95682 aattacataatttcaattcattaattattatataatttcctttttcatattcttaaccagtacctcgggggcaccggttagcattttcctta 95773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1152 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 766 - 716
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatc 51  Q
    |||||||||||||||||| ||||| |||||||||||||| |||||||||||    
T  766 aattacacaatttcaatggattaactactatataatttcctttttcatatc 716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 41007 - 40953
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    ||||||| |||||||||||||||| || ||||||||||| |||||||||| ||||    
T  41007 aattacataatttcaatgcattaactattatataatttcatttttcatattctta 40953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 1459 - 1415
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttctttttt 45  Q
    |||||||||||||||||||| ||| || |||||||||||||||||    
T  1459 aattacacaatttcaatgcaataactattatataatttctttttt 1415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 69314 - 69251
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatccttatccagtgcc 64  Q
    ||||||| ||||| |||| ||||| |||||||||||||  ||||||||||||||| | ||||||    
T  69314 aattacataattttaatgtattaactactatataatttactttttcatatccttaacgagtgcc 69251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0533 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 5127 - 5073
Alignment:
Q  1 aattacacaatttcaatgcattaagtactatataatttcttttttcatatcctta 55  Q
    |||||||||||||||||  ||||| ||||||||||||| |||||| |||| ||||    
T  5127 aattacacaatttcaataaattaactactatataattttttttttaatattctta 5073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0325 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0325
Description:

Target: scaffold0325; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 17573 - 17619
Alignment:
Q  6 cacaatttcaatgcattaagtactatataatttcttttttcatatcc 52  Q
    ||||||||||||||||||  |||||||||||||  ||||||||||||    
T  17573 cacaatttcaatgcattagctactatataattttctttttcatatcc 17619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University