View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20589_low_19 (Length: 251)

Name: NF20589_low_19
Description: NF20589
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20589_low_19
NF20589_low_19
[»] chr7 (56 HSPs)
chr7 (139-251)||(28218426-28218538)
chr7 (139-251)||(41600221-41600333)
chr7 (139-251)||(28218181-28218294)
chr7 (139-251)||(12006803-12006915)
chr7 (139-251)||(20419539-20419651)
chr7 (139-251)||(48672542-48672654)
chr7 (139-251)||(23704665-23704776)
chr7 (139-251)||(23704924-23705035)
chr7 (139-251)||(20419799-20419912)
chr7 (139-251)||(12006544-12006655)
chr7 (139-251)||(20458954-20459065)
chr7 (139-251)||(25772594-25772706)
chr7 (139-249)||(16995203-16995312)
chr7 (139-248)||(20963760-20963868)
chr7 (139-251)||(38879726-38879839)
chr7 (139-251)||(20458695-20458806)
chr7 (139-251)||(23383763-23383875)
chr7 (140-251)||(1250469-1250580)
chr7 (139-251)||(38879987-38880096)
chr7 (139-251)||(41599961-41600073)
chr7 (139-251)||(10409637-10409748)
chr7 (139-251)||(44816834-44816950)
chr7 (139-251)||(6465858-6465969)
chr7 (139-251)||(25772367-25772478)
chr7 (139-251)||(48672280-48672394)
chr7 (139-251)||(20963497-20963610)
chr7 (135-192)||(7657968-7658025)
chr7 (139-251)||(48648265-48648376)
chr7 (139-251)||(23383502-23383615)
chr7 (139-192)||(7658287-7658340)
chr7 (139-188)||(24195198-24195247)
chr7 (168-251)||(24195059-24195142)
chr7 (141-187)||(31852157-31852203)
chr7 (139-188)||(33162862-33162911)
chr7 (139-251)||(48648492-48648602)
chr7 (149-192)||(14646972-14647015)
chr7 (141-192)||(23258246-23258297)
chr7 (141-251)||(33131638-33131748)
chr7 (209-247)||(7658236-7658274)
chr7 (209-247)||(31851506-31851544)
chr7 (214-251)||(23704843-23704880)
chr7 (202-250)||(24194929-24194978)
chr7 (203-247)||(1250273-1250317)
chr7 (202-250)||(10409440-10409488)
chr7 (159-251)||(14630359-14630449)
chr7 (139-192)||(6466127-6466180)
chr7 (214-251)||(20419695-20419732)
chr7 (214-251)||(20458850-20458887)
chr7 (214-251)||(20963654-20963691)
chr7 (214-251)||(24194973-24195010)
chr7 (214-251)||(25772522-25772559)
chr7 (214-251)||(28218322-28218359)
chr7 (139-192)||(31851244-31851297)
chr7 (214-251)||(41600117-41600154)
chr7 (214-251)||(44816994-44817031)
chr7 (214-251)||(48648420-48648457)
[»] chr8 (46 HSPs)
chr8 (139-251)||(10108373-10108485)
chr8 (139-251)||(7689786-7689898)
chr8 (139-251)||(43851668-43851779)
chr8 (141-250)||(10108634-10108743)
chr8 (141-250)||(14820558-14820667)
chr8 (139-248)||(30789773-30789882)
chr8 (139-250)||(5554872-5554983)
chr8 (139-251)||(14820298-14820409)
chr8 (141-250)||(21147941-21148051)
chr8 (139-251)||(10171406-10171518)
chr8 (144-250)||(5555133-5555239)
chr8 (139-251)||(7689527-7689638)
chr8 (144-251)||(42112993-42113099)
chr8 (139-247)||(43481581-43481690)
chr8 (139-251)||(18044092-18044202)
chr8 (139-251)||(21148199-21148311)
chr8 (141-244)||(26136690-26136793)
chr8 (147-251)||(30789519-30789622)
chr8 (139-248)||(42606019-42606128)
chr8 (139-251)||(17622893-17623002)
chr8 (139-247)||(17623154-17623261)
chr8 (139-251)||(2583583-2583696)
chr8 (139-251)||(26136948-26137059)
chr8 (139-251)||(2583323-2583435)
chr8 (140-251)||(22494647-22494757)
chr8 (141-250)||(14767511-14767621)
chr8 (141-190)||(20877069-20877118)
chr8 (139-192)||(35367413-35367466)
chr8 (139-192)||(42113303-42113356)
chr8 (161-251)||(26532807-26532898)
chr8 (140-251)||(42605759-42605868)
chr8 (141-192)||(1949657-1949708)
chr8 (149-251)||(38726700-38726802)
chr8 (141-192)||(40487736-40487787)
chr8 (139-192)||(14767826-14767879)
chr8 (214-251)||(17623046-17623083)
chr8 (154-250)||(21144769-21144865)
chr8 (141-188)||(20875703-20875750)
chr8 (141-192)||(39888486-39888537)
chr8 (148-191)||(40486641-40486684)
chr8 (214-251)||(7689705-7689742)
chr8 (214-251)||(10108552-10108589)
chr8 (214-251)||(22494566-22494603)
chr8 (218-251)||(42605939-42605972)
chr8 (160-192)||(21144598-21144630)
chr8 (204-244)||(35368684-35368724)
[»] chr5 (46 HSPs)
chr5 (139-251)||(23979164-23979276)
chr5 (139-251)||(14411700-14411812)
chr5 (139-250)||(31799643-31799754)
chr5 (130-251)||(14143896-14144016)
chr5 (139-251)||(24837172-24837284)
chr5 (139-251)||(17762286-17762397)
chr5 (139-250)||(18336720-18336830)
chr5 (139-251)||(7126180-7126292)
chr5 (139-251)||(17762545-17762657)
chr5 (139-251)||(24837432-24837544)
chr5 (139-251)||(41001616-41001727)
chr5 (141-250)||(14144165-14144274)
chr5 (141-250)||(7125923-7126031)
chr5 (139-251)||(24074306-24074418)
chr5 (139-251)||(6817126-6817237)
chr5 (141-250)||(29445070-29445178)
chr5 (141-250)||(27158996-27159104)
chr5 (140-251)||(31799903-31800013)
chr5 (139-251)||(4918992-4919105)
chr5 (139-251)||(18336470-18336583)
chr5 (139-251)||(994009-994120)
chr5 (139-251)||(24650962-24651074)
chr5 (139-251)||(30512291-30512402)
chr5 (139-251)||(30552631-30552742)
chr5 (139-251)||(993753-993862)
chr5 (139-251)||(4919253-4919364)
chr5 (140-251)||(29444810-29444921)
chr5 (150-248)||(41001370-41001465)
chr5 (141-250)||(27159221-27159327)
chr5 (139-251)||(14411929-14412040)
chr5 (141-248)||(20709478-20709584)
chr5 (139-246)||(24650705-24650810)
chr5 (167-250)||(24074566-24074649)
chr5 (149-251)||(22571090-22571192)
chr5 (202-251)||(20709278-20709327)
chr5 (203-247)||(6817388-6817432)
chr5 (141-251)||(41424521-41424631)
chr5 (214-251)||(18336638-18336675)
chr5 (203-247)||(20959358-20959402)
chr5 (204-251)||(32233967-32234014)
chr5 (141-187)||(28071825-28071871)
chr5 (214-251)||(7126076-7126113)
chr5 (214-251)||(17762464-17762501)
chr5 (214-251)||(24650859-24650896)
chr5 (214-251)||(24837328-24837365)
chr5 (219-251)||(28071760-28071792)
[»] chr3 (67 HSPs)
chr3 (139-251)||(9266978-9267090)
chr3 (139-248)||(14171852-14171961)
chr3 (139-251)||(14262299-14262411)
chr3 (139-251)||(35995681-35995793)
chr3 (139-247)||(45969918-45970026)
chr3 (139-250)||(16721994-16722105)
chr3 (139-250)||(16722255-16722366)
chr3 (141-250)||(14262041-14262150)
chr3 (141-250)||(14162135-14162243)
chr3 (139-251)||(19113028-19113140)
chr3 (139-251)||(33372409-33372521)
chr3 (139-251)||(43572392-43572504)
chr3 (139-246)||(45970183-45970291)
chr3 (141-250)||(5800869-5800977)
chr3 (139-251)||(5800608-5800720)
chr3 (139-250)||(19112767-19112879)
chr3 (139-251)||(20853959-20854070)
chr3 (139-251)||(21633159-21633271)
chr3 (139-251)||(30500304-30500415)
chr3 (139-249)||(33372669-33372779)
chr3 (139-248)||(11003735-11003844)
chr3 (139-236)||(19720336-19720433)
chr3 (141-250)||(30500048-30500155)
chr3 (139-247)||(49986530-49986639)
chr3 (139-251)||(14161874-14161986)
chr3 (139-251)||(45003499-45003611)
chr3 (139-251)||(52552951-52553063)
chr3 (128-192)||(27946187-27946251)
chr3 (139-251)||(20853698-20853811)
chr3 (139-251)||(9267238-9267349)
chr3 (139-251)||(17465630-17465742)
chr3 (139-247)||(17649277-17649384)
chr3 (139-251)||(21632904-21633011)
chr3 (139-251)||(43572654-43572765)
chr3 (139-251)||(4204712-4204823)
chr3 (139-251)||(14171590-14171701)
chr3 (139-250)||(35995942-35996050)
chr3 (141-192)||(27946114-27946165)
chr3 (150-251)||(45003759-45003859)
chr3 (148-251)||(36990923-36991025)
chr3 (148-251)||(37016363-37016465)
chr3 (141-250)||(15328724-15328834)
chr3 (139-251)||(49986791-49986903)
chr3 (148-251)||(35740829-35740930)
chr3 (139-251)||(38283553-38283665)
chr3 (141-250)||(52552695-52552806)
chr3 (141-189)||(3425973-3426021)
chr3 (141-192)||(3424779-3424830)
chr3 (141-192)||(35741906-35741957)
chr3 (139-191)||(24490242-24490294)
chr3 (208-251)||(1068912-1068955)
chr3 (139-244)||(17465370-17465476)
chr3 (203-250)||(38283814-38283861)
chr3 (139-192)||(15328466-15328519)
chr3 (214-251)||(16722173-16722210)
chr3 (214-251)||(49986710-49986747)
chr3 (149-251)||(32998397-32998497)
chr3 (202-250)||(45058755-45058803)
chr3 (214-251)||(9267134-9267171)
chr3 (214-251)||(19112924-19112961)
chr3 (214-251)||(21633078-21633115)
chr3 (210-251)||(35995837-35995878)
chr3 (210-251)||(38283728-38283769)
chr3 (214-251)||(45970097-45970134)
chr3 (210-251)||(47575431-47575472)
chr3 (139-192)||(47575593-47575646)
chr3 (215-251)||(14262195-14262231)
[»] chr1 (57 HSPs)
chr1 (126-251)||(18462276-18462400)
chr1 (139-248)||(39826312-39826421)
chr1 (141-250)||(17606572-17606679)
chr1 (139-251)||(39711335-39711447)
chr1 (139-251)||(4906965-4907077)
chr1 (139-251)||(4907225-4907337)
chr1 (139-251)||(33628693-33628805)
chr1 (139-251)||(52058271-52058383)
chr1 (139-251)||(24467632-24467743)
chr1 (141-251)||(33628953-33629063)
chr1 (139-251)||(39826053-39826165)
chr1 (139-251)||(24467890-24467999)
chr1 (139-251)||(8292807-8292919)
chr1 (139-251)||(30299494-30299606)
chr1 (139-251)||(52058014-52058126)
chr1 (139-251)||(17606307-17606423)
chr1 (140-247)||(18462551-18462658)
chr1 (139-251)||(39711077-39711187)
chr1 (139-251)||(8293070-8293183)
chr1 (139-247)||(30299235-30299342)
chr1 (139-251)||(34749368-34749480)
chr1 (139-250)||(39970909-39971021)
chr1 (139-243)||(29696568-29696671)
chr1 (139-251)||(18342282-18342392)
chr1 (139-251)||(29696821-29696932)
chr1 (139-251)||(34749141-34749252)
chr1 (141-251)||(48071966-48072076)
chr1 (139-245)||(48072230-48072336)
chr1 (130-192)||(20995692-20995754)
chr1 (141-250)||(20995932-20996040)
chr1 (155-251)||(42510034-42510129)
chr1 (139-251)||(30252161-30252275)
chr1 (139-251)||(43539350-43539462)
chr1 (148-251)||(17501993-17502095)
chr1 (141-188)||(27039643-27039690)
chr1 (141-188)||(42510341-42510388)
chr1 (141-192)||(43539669-43539720)
chr1 (139-251)||(39970648-39970761)
chr1 (141-190)||(37236723-37236772)
chr1 (139-187)||(13230059-13230107)
chr1 (149-192)||(17500782-17500825)
chr1 (141-192)||(43400758-43400809)
chr1 (214-251)||(42510173-42510210)
chr1 (159-250)||(16294211-16294302)
chr1 (215-251)||(34749296-34749332)
chr1 (215-251)||(48072144-48072180)
chr1 (141-192)||(26271207-26271258)
chr1 (213-251)||(7473869-7473907)
chr1 (217-251)||(13229916-13229950)
chr1 (214-251)||(4907121-4907158)
chr1 (214-251)||(17606490-17606527)
chr1 (214-251)||(29696745-29696782)
chr1 (214-251)||(33628849-33628886)
chr1 (214-251)||(39711254-39711291)
chr1 (209-250)||(43539611-43539652)
chr1 (219-251)||(30299418-30299450)
chr1 (219-251)||(39970805-39970837)
[»] chr4 (66 HSPs)
chr4 (139-251)||(9618983-9619095)
chr4 (139-251)||(38574231-38574343)
chr4 (139-251)||(46046687-46046798)
chr4 (139-251)||(3018014-3018127)
chr4 (139-251)||(9516613-9516725)
chr4 (139-251)||(9516873-9516985)
chr4 (139-251)||(34063985-34064097)
chr4 (139-251)||(35376391-35376502)
chr4 (139-249)||(26252502-26252612)
chr4 (139-245)||(9396968-9397073)
chr4 (139-248)||(9619245-9619354)
chr4 (144-251)||(15640724-15640830)
chr4 (139-251)||(9396702-9396814)
chr4 (139-251)||(31090324-31090436)
chr4 (134-251)||(38573967-38574083)
chr4 (139-250)||(48259826-48259938)
chr4 (139-247)||(35376166-35376273)
chr4 (146-247)||(31943959-31944061)
chr4 (141-251)||(48580129-48580239)
chr4 (141-250)||(37012712-37012821)
chr4 (139-251)||(7819018-7819129)
chr4 (139-192)||(31218303-31218356)
chr4 (139-247)||(37012974-37013081)
chr4 (139-251)||(3273883-3273993)
chr4 (139-251)||(3273624-3273737)
chr4 (139-251)||(15640978-15641091)
chr4 (139-251)||(31090063-31090176)
chr4 (130-191)||(41946959-41947020)
chr4 (139-251)||(46046433-46046539)
chr4 (139-250)||(13132205-13132314)
chr4 (133-250)||(4356145-4356261)
chr4 (154-251)||(43312227-43312324)
chr4 (141-250)||(48579871-48579980)
chr4 (141-250)||(3018276-3018383)
chr4 (139-247)||(12904750-12904857)
chr4 (136-251)||(13131940-13132056)
chr4 (139-251)||(31944213-31944325)
chr4 (209-251)||(26252341-26252383)
chr4 (139-188)||(41947180-41947229)
chr4 (139-244)||(48260021-48260125)
chr4 (202-250)||(34064246-34064294)
chr4 (141-184)||(18667620-18667663)
chr4 (141-192)||(36887685-36887736)
chr4 (209-251)||(7819277-7819319)
chr4 (141-250)||(18713224-18713335)
chr4 (148-249)||(31083362-31083463)
chr4 (141-192)||(43313533-43313584)
chr4 (141-192)||(53896451-53896502)
chr4 (141-251)||(4355887-4355996)
chr4 (146-192)||(51029095-51029141)
chr4 (214-251)||(9516769-9516806)
chr4 (202-251)||(18713026-18713075)
chr4 (139-192)||(20069620-20069673)
chr4 (139-187)||(7819347-7819395)
chr4 (142-190)||(12520643-12520691)
chr4 (203-251)||(36888943-36888991)
chr4 (141-177)||(50462733-50462769)
chr4 (214-251)||(9619161-9619198)
chr4 (209-250)||(18667553-18667594)
chr4 (139-192)||(31082188-31082241)
chr4 (214-251)||(31944132-31944169)
chr4 (214-251)||(34064141-34064178)
chr4 (209-250)||(41947120-41947161)
chr4 (214-251)||(46046583-46046620)
chr4 (215-251)||(9396882-9396918)
chr4 (148-188)||(46934083-46934123)
[»] scaffold0117 (1 HSPs)
scaffold0117 (141-248)||(12248-12355)
[»] chr6 (39 HSPs)
chr6 (139-251)||(9481185-9481297)
chr6 (139-251)||(32017767-32017878)
chr6 (139-251)||(18500318-18500429)
chr6 (139-251)||(19284132-19284244)
chr6 (139-251)||(26385281-26385393)
chr6 (139-251)||(24731938-24732053)
chr6 (139-251)||(24732201-24732312)
chr6 (139-247)||(26385541-26385649)
chr6 (141-246)||(9154884-9154990)
chr6 (136-251)||(33714483-33714602)
chr6 (140-191)||(10321737-10321788)
chr6 (139-188)||(18500655-18500704)
chr6 (139-251)||(30617970-30618077)
chr6 (139-192)||(2299635-2299688)
chr6 (148-251)||(9854150-9854251)
chr6 (202-250)||(9481446-9481494)
chr6 (159-247)||(3230129-3230217)
chr6 (149-192)||(2299353-2299396)
chr6 (205-248)||(10321997-10322040)
chr6 (149-192)||(21069527-21069570)
chr6 (139-186)||(30458903-30458950)
chr6 (209-243)||(2299580-2299614)
chr6 (214-251)||(26385437-26385474)
chr6 (202-251)||(33637625-33637674)
chr6 (139-192)||(34884560-34884613)
chr6 (203-247)||(17142744-17142788)
chr6 (214-250)||(17142798-17142834)
chr6 (203-243)||(30618232-30618272)
chr6 (141-192)||(21070859-21070910)
chr6 (149-188)||(34113591-34113630)
chr6 (146-184)||(30459229-30459267)
chr6 (203-248)||(14680949-14680994)
chr6 (206-250)||(18500538-18500583)
chr6 (214-251)||(24732120-24732157)
chr6 (219-248)||(32017619-32017648)
chr6 (218-251)||(33714646-33714679)
chr6 (215-251)||(32017695-32017731)
chr6 (211-251)||(33637791-33637831)
chr6 (139-187)||(33637844-33637892)
[»] chr2 (53 HSPs)
chr2 (139-251)||(17850849-17850961)
chr2 (139-251)||(23806215-23806327)
chr2 (141-251)||(19251476-19251585)
chr2 (139-251)||(17463354-17463466)
chr2 (141-245)||(23854693-23854797)
chr2 (147-251)||(26135828-26135932)
chr2 (139-251)||(26236130-26236242)
chr2 (134-251)||(26236358-26236474)
chr2 (139-251)||(15106070-15106182)
chr2 (139-251)||(15106330-15106440)
chr2 (139-251)||(17850590-17850701)
chr2 (139-251)||(22263454-22263568)
chr2 (139-251)||(13254699-13254811)
chr2 (141-250)||(26560561-26560668)
chr2 (139-251)||(42670982-42671094)
chr2 (139-251)||(19251733-19251844)
chr2 (140-251)||(30390463-30390574)
chr2 (139-251)||(13254500-13254612)
chr2 (139-251)||(20498750-20498860)
chr2 (141-250)||(42670722-42670833)
chr2 (133-247)||(39878100-39878213)
chr2 (139-248)||(20499011-20499120)
chr2 (147-251)||(17463103-17463206)
chr2 (141-250)||(22263197-22263305)
chr2 (139-242)||(23046710-23046813)
chr2 (139-183)||(23855025-23855069)
chr2 (139-242)||(44098894-44098997)
chr2 (139-189)||(26560880-26560930)
chr2 (141-190)||(12419046-12419095)
chr2 (141-190)||(12431106-12431155)
chr2 (139-247)||(34548577-34548684)
chr2 (141-192)||(30958689-30958740)
chr2 (141-188)||(30959997-30960044)
chr2 (149-250)||(33290062-33290163)
chr2 (141-250)||(33290313-33290420)
chr2 (139-192)||(23047904-23047957)
chr2 (139-188)||(26136143-26136192)
chr2 (148-192)||(13284735-13284779)
chr2 (209-251)||(13284671-13284713)
chr2 (158-251)||(21482143-21482235)
chr2 (209-251)||(23806025-23806067)
chr2 (139-192)||(39878395-39878447)
chr2 (141-185)||(13284417-13284461)
chr2 (203-251)||(23854929-23854977)
chr2 (212-251)||(13284484-13284523)
chr2 (214-251)||(15106249-15106286)
chr2 (214-251)||(22263350-22263387)
chr2 (214-251)||(23806134-23806171)
chr2 (214-251)||(26236277-26236314)
chr2 (206-251)||(30390618-30390663)
chr2 (214-251)||(33290231-33290268)
chr2 (214-251)||(39878365-39878402)
chr2 (215-251)||(23854825-23854861)
[»] scaffold0449 (2 HSPs)
scaffold0449 (139-247)||(7466-7575)
scaffold0449 (139-251)||(7229-7341)
[»] scaffold0361 (3 HSPs)
scaffold0361 (139-251)||(4565-4678)
scaffold0361 (139-251)||(4826-4937)
scaffold0361 (214-251)||(4745-4782)
[»] scaffold0185 (1 HSPs)
scaffold0185 (139-247)||(3872-3980)
[»] scaffold0141 (2 HSPs)
scaffold0141 (139-251)||(8585-8697)
scaffold0141 (139-247)||(8328-8434)
[»] scaffold0809 (2 HSPs)
scaffold0809 (139-251)||(1414-1525)
scaffold0809 (134-251)||(1673-1786)
[»] scaffold0352 (2 HSPs)
scaffold0352 (139-250)||(4670-4781)
scaffold0352 (139-251)||(5941-6054)
[»] scaffold0477 (2 HSPs)
scaffold0477 (139-251)||(5011-5121)
scaffold0477 (139-188)||(4883-4932)
[»] scaffold0176 (2 HSPs)
scaffold0176 (139-192)||(15950-16003)
scaffold0176 (209-247)||(15899-15937)
[»] scaffold0881 (4 HSPs)
scaffold0881 (126-246)||(487-605)
scaffold0881 (202-251)||(286-335)
scaffold0881 (214-251)||(379-416)
scaffold0881 (146-186)||(229-269)
[»] scaffold0157 (1 HSPs)
scaffold0157 (142-190)||(226-274)


Alignment Details
Target: chr7 (Bit Score: 82; Significance: 8e-39; HSPs: 56)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 28218538 - 28218426
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  28218538 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcca 28218439  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  28218438 cttttggtccctc 28218426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 41600333 - 41600221
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  41600333 taaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcca 41600234  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  41600233 cttttggtccctc 41600221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 28218181 - 28218294
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||||    
T  28218181 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttcc 28218280  T
Q  238 acttttggtccctc 251  Q
    ||||||||||||||    
T  28218281 acttttggtccctc 28218294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 12006915 - 12006803
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||| | |||||||||||||||||||| |||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  12006915 taaatacctcttttcgttcatgtaatattagcgaattccgattttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcca 12006816  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  12006815 cttttggtccctc 12006803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 20419539 - 20419651
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||| |||||||||    
T  20419539 taaatacctcttttcgtccctataatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 20419638  T
Q  239 cttttggtccctc 251  Q
     ||||||||||||    
T  20419639 tttttggtccctc 20419651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 48672654 - 48672542
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||| |||||||||||||||||| ||||||||||||||||         |||||| ||||| ||||||||||||||||||||||||    
T  48672654 taaatacctcttttcgtctctgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttatccctgtaatttcagattcttcca 48672555  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  48672554 cttttggtccctc 48672542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 23704665 - 23704776
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||         |||||| ||||||||||||||||||||||||||||||    
T  23704665 taaatacctcttttcgtccctgtaatattagcgaattccggttttactcactgt-aaaaaaaagatttacattttgtccctgtaatttcagattcttcca 23704763  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  23704764 cttttggtccctc 23704776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 23705035 - 23704924
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||| |||||||||    
T  23705035 taaatacctcttttcgtctctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcatattcttcca 23704937  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  23704936 cttttggtccctc 23704924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 20419912 - 20419799
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||          |||||| ||||||||||||||||||||||||||||     
T  20419912 taaatacctctttttgtccctgtaatattaacgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttct 20419813  T
Q  238 acttttggtccctc 251  Q
    ||||||||||||||    
T  20419812 acttttggtccctc 20419799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 12006544 - 12006655
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||          | ||| ||||||||||||||||||||||||||||||    
T  12006544 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaa-aattagattttgtccctgtaatttcagattcttcca 12006642  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  12006643 cttttgatccctc 12006655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 20459065 - 20458954
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||| |||||         |||||| |||||||| |||||||||||||||||||||    
T  20459065 taaatacctcttttcgtccctgtaatattagggaattccggttt-agtacctgtaaaaaaaaagatttagattttgtcactgtaatttcagattcttcca 20458967  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  20458966 cttttggtccctc 20458954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 25772706 - 25772594
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| |||||||||||||| ||||||||| ||||||| ||||||||||||||         |||||| |||||||||||||||||||||||||||| |    
T  25772706 taaatatctcttttcgtccctataatattagtgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcta 25772607  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  25772606 cttttggtccctc 25772594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 249
Target Start/End: Original strand, 16995203 - 16995312
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||| |||||          ||||| ||||||||||||||||||||||||||||||    
T  16995203 taaatacctcttttcgtctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaat-atttagattttgtccctgtaatttcagattcttcca 16995301  T
Q  239 cttttggtccc 249  Q
    |||||||||||    
T  16995302 cttttggtccc 16995312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 20963868 - 20963760
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||          ||||| |||| |||||||||||||||||||||| ||    
T  20963868 taaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaataaa-atttagatttagtccctgtaatttcagattctttca 20963770  T
Q  239 cttttggtcc 248  Q
    ||||||||||    
T  20963769 cttttggtcc 20963760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 38879726 - 38879839
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||| |||||          |||||| |||||||||||||||||||| ||||||||    
T  38879726 taaatacctcttttcgtccctgtaatattagcgaattccaattttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 38879825  T
Q  238 acttttggtccctc 251  Q
    ||||||||||||||    
T  38879826 acttttggtccctc 38879839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 20458695 - 20458806
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||||||||||          ||||| |||||||| |||||||||||||||||||||    
T  20458695 taaatacattttttcgtccctgtaatattaacgaattccggttttagtccctgtaaataaaaa-atttagattttgtcgctgtaatttcagattcttcca 20458793  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  20458794 cttttggtccctc 20458806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 23383875 - 23383763
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||||||          |||||| |||||||||||||||||||| |||||||||    
T  23383875 taaatacctcttttcgtccctgtaatattagtgaattctgattttagtccctgaaaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 23383776  T
Q  239 cttttggtccctc 251  Q
    | |||||||||||    
T  23383775 cctttggtccctc 23383763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 1250580 - 1250469
Alignment:
Q  140 aaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccac 239  Q
    ||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||         |||||| ||||||||||| |||||||| ||||||||||    
T  1250580 aaatatctcttttcgtccttgtaatattagcgaattccagttttagtctctgtaaactaaaagatttagattttgtccctttaatttcatattcttccac 1250481  T
Q  240 ttttggtccctc 251  Q
    ||||||||||||    
T  1250480 ttttggtccctc 1250469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 38880096 - 38879987
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||    |          ||||| ||||||||||||||||||||||||||||||    
T  38880096 taaatacctcttttcgtccctgtaatattagcaaattccggttttagtct---ttaaaaaaaaaatttagattttgtccctgtaatttcagattcttcca 38880000  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  38879999 cttttggtccctc 38879987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 41599961 - 41600073
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||| | |          ||||| ||||||||||||||||||||||||||||||    
T  41599961 taaatacctcttttcatccctgtaatattagcgaatttcggttttagtccatataaaaaaaaatatttagattttgtccctgtaatttcagattcttcca 41600060  T
Q  239 cttttggtccctc 251  Q
    | |||| ||||||    
T  41600061 catttgatccctc 41600073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 10409748 - 10409637
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||| ||| |||||||||||||||||||| |||||||||||||         |||||| |||||||| ||||||||| |||||||||||    
T  10409748 taaatacctcttttcatccatgtaatattagcgaattccgattttagtccctgt-aaaaaaaagatttagattttgtctctgtaattttagattcttcca 10409650  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  10409649 cttttgatccctc 10409637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 44816834 - 44816950
Alignment:
Q  139 taaatacctcttttc--gtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnn--gatttaaattttgtccctgtaatttcagattct 234  Q
    |||||||||||||||  |||||||||||||||||||||| ||||||||||| ||||           |||||  ||||||||||||||||||||||||||    
T  44816834 taaatacctcttttctcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaaaagattttgattttgtccctgtaatttcagattct 44816933  T
Q  235 tccacttttggtccctc 251  Q
    |||||||||||||||||    
T  44816934 tccacttttggtccctc 44816950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 6465858 - 6465969
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| || ||||||||| ||||||||||||||||||||||||||||||||||          ||||| ||| ||| | ||||||||||||||||||||    
T  6465858 taaatatcttttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaat-atttagattatgttcttgtaatttcagattcttcca 6465956  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  6465957 cttttggtccctc 6465969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 25772367 - 25772478
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||  ||||         |||||| ||||||||| |||||||||| |||||||||    
T  25772367 taaatacctcttttcgtccctgtaatattagcgaatttcgattttagtttctgt-aaaaaaaagatttagattttgtccttgtaatttcatattcttcca 25772465  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  25772466 cttttgttccctc 25772478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 48672280 - 48672394
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt--nnnnnnnnngatttaaattttgtccctgtaatttcagattcttc 236  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||           |||||| |||| ||| |||||||||||||||||||    
T  48672280 taaatacctcttttcgtccctgtaatattagtgaatttcggttttagtctctgtaaaaaaaaaaagatttagatttcgtctctgtaatttcagattcttc 48672379  T
Q  237 cacttttggtccctc 251  Q
    |||||||| ||||||    
T  48672380 cacttttgatccctc 48672394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 20963497 - 20963610
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttaaattttgtccctgtaatttcagattcttcc 237  Q
    |||||| || ||||||||||||||||||||| ||||||  ||||||||||||||          |||||| |||| ||||||||||||| ||||||||||    
T  20963497 taaatatctattttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaaaagatttagatttagtccctgtaattttagattcttcc 20963596  T
Q  238 acttttggtccctc 251  Q
    ||||||||||||||    
T  20963597 acttttggtccctc 20963610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 135 - 192
Target Start/End: Original strand, 7657968 - 7658025
Alignment:
Q  135 aggctaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  7657968 aggctaaatacctcttttcgtccatgtaatattagcgaatttcggttttaatccctgt 7658025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 48648265 - 48648376
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| ||||||||||||||||||||| |||||||| || ||||||||| |||         |||||| |||||||||||||||||||||||| || ||    
T  48648265 taaatatctcttttcgtccctgtaatatcagcgaatttcgattttagtccatgt-aagaaaaagatttagattttgtccctgtaatttcagattttttca 48648363  T
Q  239 cttttggtccctc 251  Q
     ||||||||||||    
T  48648364 tttttggtccctc 48648376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 23383502 - 23383615
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||| |||||||||| |||||||||||| |||||||||||||||||||| |          |||||| ||||||||||| |||||||| ||||||||    
T  23383502 taaatacttcttttcgtctctgtaatattagtgaattccggttttagtccctataaaaaaaaaagatttagattttgtccctataatttcatattcttcc 23383601  T
Q  238 acttttggtccctc 251  Q
    | |||| |||||||    
T  23383602 attttttgtccctc 23383615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 7658340 - 7658287
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||| ||||    
T  7658340 taaatacctcttttcgtccctgtaatattaacgaatttcggttttagtctctgt 7658287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 24195247 - 24195198
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 188  Q
    |||||||||||||||||||||||||||||||||||||| | |||||||||    
T  24195247 taaatacctcttttcgtccctgtaatattagcgaattctgattttagtcc 24195198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 251
Target Start/End: Complemental strand, 24195142 - 24195059
Alignment:
Q  168 agcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||| ||||||||||||||||||         |||||| ||||||||| |||||||||| ||||||||||||||||||||||    
T  24195142 agcgaaatccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttttggtccctc 24195059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 31852203 - 31852157
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtc 187  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||    
T  31852203 aatacctcttttcgtccctgtaatattaacgaatttcggttttagtc 31852157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 33162911 - 33162862
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 188  Q
    |||||||||||||||||| |||||||||||||||||| | ||||||||||    
T  33162911 taaatacctcttttcgtctctgtaatattagcgaatttctgttttagtcc 33162862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 48648602 - 48648492
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||| |||||||||||| |||||||||||||||| || |||||||| || |         |||||| ||||||||  |||||||| |||||||||||    
T  48648602 taaatacttcttttcgtcccagtaatattagcgaatttcgattttagtctctat--aaaaaaagatttagattttgtctatgtaattttagattcttcca 48648505  T
Q  239 cttttggtccctc 251  Q
    ||| |||||||||    
T  48648504 cttctggtccctc 48648492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Complemental strand, 14647015 - 14646972
Alignment:
Q  149 ttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  14647015 ttttagtccctgtaatatgagcgaattccggttttagtccctgt 14646972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 23258297 - 23258246
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||| ||||||| ||| |||||||||||||||||||||||||| ||||||||    
T  23258297 aatatctcttttggtctctgtaatattagcgaattccggttttggtccctgt 23258246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 251
Target Start/End: Original strand, 33131638 - 33131748
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||||| | ||| ||||||||||||| ||||| |||||||||||||||||||          ||||| ||| ||||||| | ||||||||||||||| ||    
T  33131638 aataccccctttggtccctgtaatatgagcgatttccggttttagtccctgtaaataaaaaaatttagattctgtccctatcatttcagattcttccgct 33131737  T
Q  241 tttggtccctc 251  Q
    |||| ||||||    
T  33131738 tttgctccctc 33131748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 7658274 - 7658236
Alignment:
Q  209 attttgtccctgtaatttcagattcttccacttttggtc 247  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  7658274 attttgtccctgtaatttaagattcttccacttttggtc 7658236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 31851544 - 31851506
Alignment:
Q  209 attttgtccctgtaatttcagattcttccacttttggtc 247  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  31851544 attttgtccctgtaatttcatattcttccacttttggtc 31851506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 23704843 - 23704880
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||||||||||    
T  23704843 gtccctgtaatttcagattcctccacttttggtccctc 23704880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 24194929 - 24194978
Alignment:
Q  202 gatttaaattttgtccctgtaatttcagattcttc-cacttttggtccct 250  Q
    |||||| ||||||||||||||||||||||||| || ||||||||||||||    
T  24194929 gatttagattttgtccctgtaatttcagattcctctcacttttggtccct 24194978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 1250273 - 1250317
Alignment:
Q  203 atttaaattttgtccctgtaatttcagattcttccacttttggtc 247  Q
    ||||||||||||||| | |||||| ||||||||||||||||||||    
T  1250273 atttaaattttgtccttttaattttagattcttccacttttggtc 1250317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 250
Target Start/End: Original strand, 10409440 - 10409488
Alignment:
Q  202 gatttaaattttgtccctgtaatttcagattcttccacttttggtccct 250  Q
    |||||| ||||||||| |||||||||||||||||| |||||| ||||||    
T  10409440 gatttagattttgtccttgtaatttcagattcttctacttttagtccct 10409488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 251
Target Start/End: Original strand, 14630359 - 14630449
Alignment:
Q  159 tgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||| |||||||||||||||||||||||||         |  ||| ||| ||||||||| |||||||||||||||||  ||||||||||    
T  14630359 tgtaatatgagcgaattccggttttagtccctgtaaaaaaaagg--ttagattctgtccctgtcatttcagattcttccacaattggtccctc 14630449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 6466180 - 6466127
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||| ||||||| ||  |||||||||||||||||| ||||||||||| ||||    
T  6466180 taaatatctctttttgtatctgtaatattagcgaatttcggttttagtctctgt 6466127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 20419732 - 20419695
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  20419732 gtccctgtaatttcatattcctccacttttggtccctc 20419695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 20458887 - 20458850
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  20458887 gtccttgtaatttcagattcctccacttttggtccctc 20458850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 20963691 - 20963654
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||| |||||||||| ||||||||||||||||||||||    
T  20963691 gtccttgtaatttcatattcttccacttttggtccctc 20963654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 24194973 - 24195010
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  24194973 gtccctataatttcagattcctccacttttggtccctc 24195010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 25772559 - 25772522
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  25772559 gtccttgtaatttcagattcctccacttttggtccctc 25772522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 28218359 - 28218322
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||  |||||||||||||||||    
T  28218359 gtccctgtaatttcagattactccacttttggtccctc 28218322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 31851244 - 31851297
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    ||||||||||||||||||| | ||||||||| ||||| || ||||||| |||||    
T  31851244 taaatacctcttttcgtccttttaatattagtgaatttcgattttagttcctgt 31851297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 41600154 - 41600117
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  41600154 gtccctgtaatttcagattcctccacttttgatccctc 41600117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 44817031 - 44816994
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  44817031 gtccttgtaatttcagattcctccacttttggtccctc 44816994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 48648457 - 48648420
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  48648457 gtccctgtaatttcagattcctccaattttggtccctc 48648420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 78; Significance: 2e-36; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 10108373 - 10108485
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||| |||||||||    
T  10108373 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 10108472  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  10108473 cttttggtccctc 10108485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 7689898 - 7689786
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||| |||         |||||||||||||||||||||||||||||||||||||    
T  7689898 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccgtgtaaaaaaaaagatttaaattttgtccctgtaatttcagattcttcca 7689799  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  7689798 cttttgatccctc 7689786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 43851668 - 43851779
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  43851668 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaacaaaagatttagattttgtccctgtaatttcagattcttcca 43851766  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  43851767 cttttgatccctc 43851779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 10108743 - 10108634
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||         |||||| |||||||||||||||||||| |||||||||||    
T  10108743 aatacctcttttcgtccctgtaatattagcaaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 10108644  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  10108643 tttggtccct 10108634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 14820667 - 14820558
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||| |||||||||||    
T  14820667 aatacctcttttagtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 14820568  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  14820567 tttggtccct 14820558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 30789882 - 30789773
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  30789882 taaatacctcttttcgtccctgtaatattagtaaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcca 30789783  T
Q  239 cttttggtcc 248  Q
    ||||||||||    
T  30789782 cttttggtcc 30789773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 5554872 - 5554983
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||| | ||||||||||| |||||||| |||||||||    
T  5554872 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagattcagattttgtccctataatttcatattcttcca 5554971  T
Q  239 cttttggtccct 250  Q
    ||||||||||||    
T  5554972 cttttggtccct 5554983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 14820298 - 14820409
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||         |||||| |||||||||||||||||||| |||||||||    
T  14820298 taaatacctcttttcgtccctgtaatattagcgaattccggttttagttcctgt-aaaaaaaagatttagattttgtccctgtaatttcatattcttcca 14820396  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  14820397 cttttggtccctc 14820409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 21147941 - 21148051
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttccac 239  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||          |||||| |||||||||||||||||||||||||||||||    
T  21147941 aatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttccac 21148040  T
Q  240 ttttggtccct 250  Q
    |||||||||||    
T  21148041 ttttggtccct 21148051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 10171518 - 10171406
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||          ||||| |||||||||||||||||| |||||||| ||    
T  10171518 taaataccgcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaactatttagattttgtccctgtaattttagattctttca 10171419  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  10171418 cttttggtccctc 10171406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 144 - 250
Target Start/End: Complemental strand, 5555239 - 5555133
Alignment:
Q  144 acctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccactttt 243  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||||         |||||| |||||||||||||||||||| ||||||||||||||    
T  5555239 acctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccactttt 5555140  T
Q  244 ggtccct 250  Q
    |||||||    
T  5555139 ggtccct 5555133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 7689527 - 7689638
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||| |||         |||||| | ||||||| ||||||||||||||||||||    
T  7689527 taaatacctcttttcgtccctgtaatattagcgaatttcggctttagtccttgtaaataaaaagatttaga-tttgtccttgtaatttcagattcttcca 7689625  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  7689626 cttttggtccctc 7689638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 42112993 - 42113099
Alignment:
Q  144 acctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccactttt 243  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||         |||||| ||| |||||||||||||| |||||||| |||||||    
T  42112993 acctcttttcgtccctgtaatattagcgaattccgattttagtccctgt-aaaaaaaagatttagattatgtccctgtaatttaagattctttcactttt 42113091  T
Q  244 ggtccctc 251  Q
    ||||||||    
T  42113092 ggtccctc 42113099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 43481690 - 43481581
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||          ||||||||||||||||||||||||||| ||||||||    
T  43481690 taaatatctcttttcgtcactgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaattttgtccctgtaatttcaaattcttcc 43481591  T
Q  238 acttttggtc 247  Q
    ||| ||||||    
T  43481590 actcttggtc 43481581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 18044202 - 18044092
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||          | ||| ||||||||||||||||||||||||||| |     
T  18044202 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccatgtaaaaaaat--aattatattttgtccctgtaatttcagattctttcg 18044105  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  18044104 cttttgatccctc 18044092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 21148311 - 21148199
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||          | ||| ||||||||| |||||||||| |||||||||    
T  21148311 taaatacctcttttcgtctctgtaatattagtgaattccggttttagtccctgtaaaaaaaaaaaattagattttgtccttgtaatttcatattcttcca 21148212  T
Q  239 cttttggtccctc 251  Q
    ||||| |||||||    
T  21148211 cttttagtccctc 21148199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 141 - 244
Target Start/End: Original strand, 26136690 - 26136793
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||||          ||||| ||||||||| |||||||||||||||||||| |    
T  26136690 aatacctcttttcgttcctgtaatattagcgaattccagttttagtccctgtaaaaaaaaaaatttagattttgtccttgtaatttcagattcttccaat 26136789  T
Q  241 tttg 244  Q
    ||||    
T  26136790 tttg 26136793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 30789519 - 30789622
Alignment:
Q  147 tcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggt 246  Q
    |||||||||||||||||||||||||||||||| |||||||||||||         |||||| |||||||| |||||||||||||||| |||||||||| |    
T  30789519 tcttttcgtccctgtaatattagcgaattccgattttagtccctgt-aaaaaaaagatttagattttgtctctgtaatttcagattcctccacttttgat 30789617  T
Q  247 ccctc 251  Q
    |||||    
T  30789618 ccctc 30789622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 42606128 - 42606019
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| ||||||| ||||||||||||||||||||||| ||||||||||  |||         |||||| |||||||||| ||||||||| |||||||||    
T  42606128 taaatatctctttttgtccctgtaatattagcgaattctggttttagtcaatgtaaaaaaaaagatttagattttgtccccgtaatttcaaattcttcca 42606029  T
Q  239 cttttggtcc 248  Q
    ||||||||||    
T  42606028 cttttggtcc 42606019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 17622893 - 17623002
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||| ||||||||||||||||| | ||||||||||||||         |||||| |||||||  ||||||||| |||||||||||    
T  17622893 taaatacctcttttcgtccttgtaatattagcgaatttcagttttagtccctgt--aaaaaaagatttagattttgt-tctgtaattttagattcttcca 17622989  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  17622990 cttttggtccctc 17623002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 17623261 - 17623154
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||| |||||||||||||||| ||||| ||||||||| |||||         |||||| ||||||||| |||||||||| |||||||||    
T  17623261 taaatacctcttttcatccctgtaatattagccaattctggttttagtgcctgt-aaaaaaaagatttagattttgtccttgtaatttcaaattcttcca 17623163  T
Q  239 cttttggtc 247  Q
    |||||||||    
T  17623162 cttttggtc 17623154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 2583696 - 2583583
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttaaattttgtccctgtaatttcagattcttcc 237  Q
    |||||| ||||||||||||  |||||||||||||||||  ||||||| ||||||          |||||||||||||||||| |||||||||||||||||    
T  2583696 taaatatctcttttcgtcctcgtaatattagcgaattctagttttaggccctgtaaaaaaaaaagatttaaattttgtccctataatttcagattcttcc 2583597  T
Q  238 acttttggtccctc 251  Q
    ||||||||| ||||    
T  2583596 acttttggttcctc 2583583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 26137059 - 26136948
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccct-gtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    |||||||| |||||||||||||||||||||| ||||| | |||||||||||| ||          | ||| |||||||||||||||||||||||||||||    
T  26137059 taaataccacttttcgtccctgtaatattagtgaatttcagttttagtccctagtaaaaaaaa--aattagattttgtccctgtaatttcagattcttcc 26136962  T
Q  238 acttttggtccctc 251  Q
    ||||||||||||||    
T  26136961 acttttggtccctc 26136948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 2583323 - 2583435
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||| | ||||||||||||||||||| || ||||||| | |||         |||||| ||||||||||||||||||| |||||||| |    
T  2583323 taaatacctcttttcattcctgtaatattagcgaatttcgattttagttcttgtaaaataaaagatttagattttgtccctgtaatttcggattcttcta 2583422  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  2583423 cttttgatccctc 2583435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 22494757 - 22494647
Alignment:
Q  140 aaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccac 239  Q
    |||||||||| |||||||||||||||| || |||||| ||||||||| || ||         |||||| | |||||||||||||||||| ||||||||||    
T  22494757 aaatacctctcttcgtccctgtaatatcagtgaattctggttttagttcc-gtaaaaaaagagatttagaatttgtccctgtaatttcaaattcttccac 22494659  T
Q  240 ttttggtccctc 251  Q
    ||||||||||||    
T  22494658 ttttggtccctc 22494647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 14767511 - 14767621
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttaaattttgtccctgtaatttcagattcttccac 239  Q
    ||||||||||||| || ||||||||||||||||||  ||||||||||||  |          |||||| |||||||||||||||||||||||| ||||||    
T  14767511 aatacctcttttcatctctgtaatattagcgaattttggttttagtcccaataaaaaaaaaagatttagattttgtccctgtaatttcagatttttccac 14767610  T
Q  240 ttttggtccct 250  Q
    |||||||||||    
T  14767611 ttttggtccct 14767621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 20877118 - 20877069
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccct 190  Q
    |||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  20877118 aatacctcttttggtccctgtaatatgagcgaattccggttttagtccct 20877069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 35367413 - 35367466
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||||||||||| ||||||| ||||||||||||||||||||||| |||||||    
T  35367413 taaatacctcttttggtccctgcaatattagcgaattccggttttaatccctgt 35367466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 42113356 - 42113303
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    ||||||| |||||||||||||||||||||| |||||| |||||||||| |||||    
T  42113356 taaatacatcttttcgtccctgtaatattaacgaatttcggttttagttcctgt 42113303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 161 - 251
Target Start/End: Original strand, 26532807 - 26532898
Alignment:
Q  161 taatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttaaattttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||||||||||| |||          |||||| |||||||||||||||||||| ||| ||||||||||| ||||||    
T  26532807 taatattagcgaattccggttttagtccatgtaaaaaaaaaagatttagattttgtccctgtaatttcaaatttttccacttttgatccctc 26532898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 42605759 - 42605868
Alignment:
Q  140 aaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccac 239  Q
    |||||| ||||||||||| |||||||||| ||||||||| |||||||  ||||          | ||| ||||| |||||||||||||| ||||||||||    
T  42605759 aaatacttcttttcgtccatgtaatattaacgaattccgattttagtttctgtaaaaaaaa--aattagattttatccctgtaatttcatattcttccac 42605856  T
Q  240 ttttggtccctc 251  Q
    ||||||||||||    
T  42605857 ttttggtccctc 42605868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 1949657 - 1949708
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||| |||||    
T  1949657 aatacctcttttggtccctgtaatatgatcgaattccggttttagtgcctgt 1949708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 251
Target Start/End: Original strand, 38726700 - 38726802
Alignment:
Q  149 ttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtcc 248  Q
    |||| ||||||||||||| ||| ||||||||||||||||||| |           |||| ||||||||| |||||||||||||||||||||||| | |||    
T  38726700 ttttggtccctgtaatatgagcaaattccggttttagtccctataaaaaaaaaagtttagattttgtccttgtaatttcagattcttccactttagatcc 38726799  T
Q  249 ctc 251  Q
    |||    
T  38726800 ctc 38726802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 40487787 - 40487736
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||| ||||| |||| ||||||||||||||||||| ||||||||||||||    
T  40487787 aataccacttttggtccttgtaatattagcgaattccagttttagtccctgt 40487736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 14767879 - 14767826
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    ||||||||||||||||| |||||||||||||  |||| || |||||||||||||    
T  14767879 taaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgt 14767826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 17623083 - 17623046
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||||||||||    
T  17623083 gtccctgtaatttcagattcctccacttttggtccctc 17623046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 250
Target Start/End: Complemental strand, 21144865 - 21144769
Alignment:
Q  154 gtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtccct 250  Q
    ||||||||||||||| ||||||||| ||||||||||| |          ||||| ||||||||| ||||||||||||||| |||| |||| ||||||    
T  21144865 gtccctgtaatattaacgaattccgattttagtccctataaaataaaaaatttagattttgtccttgtaatttcagattcctccatttttcgtccct 21144769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 20875703 - 20875750
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 188  Q
    |||||||||||| ||||||||||||| ||| |||| ||||||||||||    
T  20875703 aatacctcttttggtccctgtaatatgagcaaatttcggttttagtcc 20875750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 39888486 - 39888537
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||||||||| |||||| |||||| |||||| | ||||||||||||||||    
T  39888486 aatacctcttttggtccctataatataagcgaaattcggttttagtccctgt 39888537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 148 - 191
Target Start/End: Original strand, 40486641 - 40486684
Alignment:
Q  148 cttttcgtccctgtaatattagcgaattccggttttagtccctg 191  Q
    ||||| ||||||||||||||| ||||||||| ||||||||||||    
T  40486641 cttttggtccctgtaatattaacgaattccgattttagtccctg 40486684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 7689705 - 7689742
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  7689705 gtccctgtaatttcagattcctccacttttgatccctc 7689742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 10108552 - 10108589
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  10108552 gtccctgtaatttcaaattcctccacttttggtccctc 10108589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 22494566 - 22494603
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  22494566 gtcccagtaatttcagattcctccacttttggtccctc 22494603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 218 - 251
Target Start/End: Original strand, 42605939 - 42605972
Alignment:
Q  218 ctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||| |||||||||||||||||    
T  42605939 ctgtaatttcagattcctccacttttggtccctc 42605972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 192
Target Start/End: Original strand, 21144598 - 21144630
Alignment:
Q  160 gtaatattagcgaattccggttttagtccctgt 192  Q
    |||||||||| ||||||||||||||||||||||    
T  21144598 gtaatattagagaattccggttttagtccctgt 21144630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 244
Target Start/End: Complemental strand, 35368724 - 35368684
Alignment:
Q  204 tttaaattttgtccctgtaatttcagattcttccacttttg 244  Q
    |||||||| ||||||||||||||||||||| | ||||||||    
T  35368724 tttaaattatgtccctgtaatttcagattccttcacttttg 35368684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 23979276 - 23979164
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||| |||||||||    
T  23979276 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattcttcca 23979177  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  23979176 cttttggtccctc 23979164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 14411700 - 14411812
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||| ||||||||  ||||||||||||||||||||    
T  14411700 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtataaaaaaagatttatattttgtctatgtaatttcagattcttcca 14411799  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  14411800 cttttggtccctc 14411812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 31799643 - 31799754
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||||||         |||||| ||||||||||||||||||||||||||||||    
T  31799643 taaatacctcttttcgtccctataatattagcgaattccggtttcagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 31799742  T
Q  239 cttttggtccct 250  Q
    ||||||||||||    
T  31799743 cttttggtccct 31799754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 130 - 251
Target Start/End: Original strand, 14143896 - 14144016
Alignment:
Q  130 ataagaggctaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcag 229  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||| ||||||||||||||||||||     
T  14143896 ataaaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcat 14143994  T
Q  230 attcttccacttttggtccctc 251  Q
    ||||||||||||||||| ||||    
T  14143995 attcttccacttttggtacctc 14144016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 24837172 - 24837284
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||         |||||| ||||||||| |||||||||| |||||||||    
T  24837172 taaatacctcttttcgtccctgtaataatagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttcca 24837271  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  24837272 cttttggtccctc 24837284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 17762286 - 17762397
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||         |||||| ||||||| ||||||||||||||||||||||    
T  17762286 taaatacctctttttgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttatattttgttcctgtaatttcagattcttcca 17762384  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  17762385 cttttggtccctc 17762397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 18336830 - 18336720
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  18336830 taaatacctcttttcgtccctgtaa-attagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 18336732  T
Q  239 cttttggtccct 250  Q
    |||||| |||||    
T  18336731 cttttgatccct 18336720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 7126292 - 7126180
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||  |||         |||||| |||||||||||||||||||| |||||||||    
T  7126292 taaatacctcttttcatccctgtaatattagcgaattccggttttagtctttgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 7126193  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  7126192 cttttggtccctc 7126180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 17762657 - 17762545
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||||||||||         |||||| ||||||||||  ||||||||||||||||||    
T  17762657 taaatacctcttttcgtccctgtagtattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccataatttcagattcttcca 17762558  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  17762557 cttttggtccctc 17762545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 24837544 - 24837432
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||         |||||| |||||||||||||||||||| ||||||| |    
T  24837544 taaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattcttcta 24837445  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  24837444 cttttgctccctc 24837432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 41001727 - 41001616
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||| |||         |||||| ||||||||||| ||||||||||||||||||    
T  41001727 taaataccttttttcgtccctgtaatattagcgaattccggttttagtccttgt-aaaaaaaagatttagattttgtccctataatttcagattcttcca 41001629  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  41001628 cttttggtccctc 41001616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 14144274 - 14144165
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||||||||||||||| ||||||||||| ||||||||| |||||||||||||         |||||| |||||||||||||||||||| |||||||||||    
T  14144274 aatacctcttttcgtcactgtaatattaacgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcaaattcttccact 14144175  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  14144174 tttggtccct 14144165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 7125923 - 7126031
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||         |||||| ||||||||||| ||||||||||||||||||||    
T  7125923 aatacctcttttcgttcctgtaatattagcgaattccgattttagtccctgt-aaaaaaaagatttagattttgtccctataatttcagattcttccact 7126021  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  7126022 tttggtccct 7126031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 24074306 - 24074418
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||          ||||| |||||||| ||||||||||| |||||||||    
T  24074306 taaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaaaaaaaatatttagattttgtctctgtaatttcatattcttcca 24074405  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  24074406 cttttggtccctc 24074418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 6817126 - 6817237
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||         |||||| ||| ||||| ||||||||||||||||||||    
T  6817126 taaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgt-aaaaaaaagatttagattatgtccatgtaatttcagattcttcca 6817224  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  6817225 cttttggtccctc 6817237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 29445178 - 29445070
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||| |||         |||||| ||||||||| ||||||||||||||||||||||    
T  29445178 aatatctcttttcgtccctgtaatattagcgaattccagttttagtcc-tgtaaaaaaaaagatttagattttgtccttgtaatttcagattcttccact 29445080  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  29445079 tttggtccct 29445070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 27158996 - 27159104
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    ||||||||||||||||| ||||||||||||||||| | ||||||||| | ||         |||||||||||||||||||||||||||||||||||||||    
T  27158996 aatacctcttttcgtccatgtaatattagcgaatttcagttttagtctcagttaaaaaaa-gatttaaattttgtccctgtaatttcagattcttccact 27159094  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  27159095 tttggtccct 27159104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 140 - 251
Target Start/End: Complemental strand, 31800013 - 31799903
Alignment:
Q  140 aaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccac 239  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||         |||||| ||||||||| ||||||||||||||||||| |    
T  31800013 aaatacctcttttcgtccctataatattagcgaattccggttttagt-cctgtaaaaaaaaagatttagattttgtccatgtaatttcagattcttcctc 31799915  T
Q  240 ttttggtccctc 251  Q
    ||||| ||||||    
T  31799914 ttttgatccctc 31799903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 4918992 - 4919105
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||||||||||| || |||||||||||||||||| |||||||||| |||||          |||||| |||||||||||||||||||| ||||||||    
T  4918992 taaatacctcttttcatctctgtaatattagcgaatttcggttttagttcctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 4919091  T
Q  238 acttttggtccctc 251  Q
    ||||||||||||||    
T  4919092 acttttggtccctc 4919105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 18336470 - 18336583
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    |||||| |||||||||||||| |||||||||||||||||| |||||||||||||          |||||| |||||||||||||||||||||||||||||    
T  18336470 taaatatctcttttcgtccctataatattagcgaattccgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttcc 18336569  T
Q  238 acttttggtccctc 251  Q
     |||||| ||||||    
T  18336570 gcttttgatccctc 18336583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 994120 - 994009
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||| |||| ||||| |||||| ||||||||| ||||||||||||||||         |||||| ||||||||||||||||| ||||||||||||    
T  994120 taaatacctttttt-gtccccgtaataatagcgaatttcggttttagtccctgtagaataaaagatttagattttgtccctgtaattgcagattcttcca 994022  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  994021 cttttggtccctc 994009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 24651074 - 24650962
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||          || || ||||| |||||||||||| |||||||||||    
T  24651074 taaatacctcttttcgtctctgtaatattagcgaattccggttttagtccatgtaaaaaagaaaatctagattttatccctgtaattttagattcttcca 24650975  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  24650974 cttttgatccctc 24650962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 30512291 - 30512402
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| |||||||||||||||||||||||| |||||  |||||||||||||||         |||||| |||| ||||||||||||||||||| |||||    
T  30512291 taaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgt-aaaaaaaggatttagatttggtccctgtaatttcagatttttcca 30512389  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  30512390 cttttggtccctc 30512402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 30552631 - 30552742
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| |||||||||||||||||||||||| |||||  |||||||||||||||         |||||| |||| ||||||||||||||||||| |||||    
T  30552631 taaatatctcttttcgtccctgtaatattagtgaattttggttttagtccctgt-aaaaaaaggatttagatttggtccctgtaatttcagatttttcca 30552729  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  30552730 cttttggtccctc 30552742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 993753 - 993862
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||          | ||| |||| |||| |||||||||| |||||||||    
T  993753 taaatacttcttttcgtctctgtaatattagcgaattccggttttagtccctgtaaaaaaa---aattagatttagtccttgtaatttcatattcttcca 993849  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  993850 cttttggtccctc 993862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 4919364 - 4919253
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||| |||||          | ||| |||||||||||||||||||||||||||| |    
T  4919364 taaatacctcttttcgtctctggaatattagcgaattccggttttagttcctgtaaaaaaaaa-aattagattttgtccctgtaatttcagattcttcta 4919266  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  4919265 cttttgatccctc 4919253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 29444810 - 29444921
Alignment:
Q  140 aaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccac 239  Q
    ||||| ||||||||||||||||||||||| ||||||| | |||||||||||||         |||||| ||| ||||| |||||||||| ||||||| ||    
T  29444810 aaatatctcttttcgtccctgtaatattaacgaattctgattttagtccctgtaaaaaaaaggatttagattatgtccttgtaatttcatattcttctac 29444909  T
Q  240 ttttggtccctc 251  Q
    ||||||||||||    
T  29444910 ttttggtccctc 29444921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 248
Target Start/End: Original strand, 41001370 - 41001465
Alignment:
Q  150 tttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtcc 248  Q
    |||||||||||||||||||||||||| ||||||||||||||||          | ||| |||||||||||||||||||| |||||||||||||||||||    
T  41001370 tttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaa---aattagattttgtccctgtaatttcatattcttccacttttggtcc 41001465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 27159327 - 27159221
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||| |||          ||||| |||||||||||||||||| | ||||||||| |    
T  27159327 aatacctcttttcgtccttgtaatattagcgaatttcggttttagtccttgtaaaaaaa---atttagattttgtccctgtaattttatattcttccatt 27159231  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  27159230 tttggtccct 27159221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 14412040 - 14411929
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||| || || |||||||| |||||| ||||||||||||||||          ||||| ||||||||| ||||||||||||||||||||    
T  14412040 taaatacctcttttcatctctataatattaacgaatttcggttttagtccctgtaaaaaaaaa-atttagattttgtccttgtaatttcagattcttcca 14411942  T
Q  239 cttttggtccctc 251  Q
    | |||||||||||    
T  14411941 cgtttggtccctc 14411929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 248
Target Start/End: Complemental strand, 20709584 - 20709478
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    ||||||||||||||||| |||||||||| ||||||  |||||||||||||||         |||||| ||||||||| |||||||||| |||||||||||    
T  20709584 aatacctcttttcgtccatgtaatattaacgaattttggttttagtccctgt-aaaaaaaagatttagattttgtccatgtaatttcatattcttccact 20709486  T
Q  241 tttggtcc 248  Q
    ||| ||||    
T  20709485 ttttgtcc 20709478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 139 - 246
Target Start/End: Original strand, 24650705 - 24650810
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||| |||||| |||||||| ||  |||         |||||| ||||||| |||||||||||| |||||||||    
T  24650705 taaatacctcttttcgtccctgtaatattaacgaatttcggttttaatctatgt--aaaaaaagatttagattttgttcctgtaatttcatattcttcca 24650802  T
Q  239 cttttggt 246  Q
    ||||||||    
T  24650803 cttttggt 24650810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 167 - 250
Target Start/End: Complemental strand, 24074649 - 24074566
Alignment:
Q  167 tagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtccct 250  Q
    |||||||||||||||||| |||||||         |||||| ||||||||| |||||||||| |||||||||||||||||||||    
T  24074649 tagcgaattccggttttaatccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccacttttggtccct 24074566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 149 - 251
Target Start/End: Original strand, 22571090 - 22571192
Alignment:
Q  149 ttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtcc 248  Q
    |||| |||| |||||||||||||||||||| |||||||||||||          ||||| ||| | || ||||||||||| |||||||||||||||||||    
T  22571090 tttttgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaatttagattatatctctgtaatttcatattcttccacttttggtcc 22571189  T
Q  249 ctc 251  Q
    |||    
T  22571190 ctc 22571192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 20709278 - 20709327
Alignment:
Q  202 gatttaaattttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||| ||| |||||||||||||||| ||||||||||||||||||||||    
T  20709278 gatttagattctgtccctgtaatttcaaattcttccacttttggtccctc 20709327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 6817432 - 6817388
Alignment:
Q  203 atttaaattttgtccctgtaatttcagattcttccacttttggtc 247  Q
    ||||| |||||||||||||||||||| ||||||||||||||||||    
T  6817432 atttagattttgtccctgtaatttcatattcttccacttttggtc 6817388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 251
Target Start/End: Original strand, 41424521 - 41424631
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||||||||||| |||| || |||||||||||||||||||||  |||| |||           |||| ||| ||||||||| ||||||||||||||||||    
T  41424521 aatacctcttttggtccttgcaatattagcgaattccggtttaggtccttgtaaaaaaaaaagtttagattctgtccctgtcatttcagattcttccact 41424620  T
Q  241 tttggtccctc 251  Q
    ||| |||||||    
T  41424621 tttagtccctc 41424631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 18336638 - 18336675
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||||||||||    
T  18336638 gtccctgtaatttcagattcctccacttttggtccctc 18336675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 20959402 - 20959358
Alignment:
Q  203 atttaaattttgtccctgtaatttcagattcttccacttttggtc 247  Q
    ||||| |||||||||||| |||||||||||| |||||||||||||    
T  20959402 atttagattttgtccctgcaatttcagattcctccacttttggtc 20959358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 32233967 - 32234014
Alignment:
Q  204 tttaaattttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||| ||||||||||| | |||| ||||||||||||||||||||||||    
T  32233967 tttagattttgtccctatcatttgagattcttccacttttggtccctc 32234014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 28071871 - 28071825
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtc 187  Q
    |||||| ||||| ||||||||||||| |||||||| |||||||||||    
T  28071871 aataccccttttggtccctgtaatatgagcgaatttcggttttagtc 28071825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 7126113 - 7126076
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  7126113 gtccctgtaatttcaaattcctccacttttggtccctc 7126076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 17762464 - 17762501
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||| |||||| |||||||||||||||||    
T  17762464 gtccctgtaattttagattcctccacttttggtccctc 17762501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 24650896 - 24650859
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  24650896 gtccctgtaatttcagattcctccatttttggtccctc 24650859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 24837365 - 24837328
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  24837365 gtccctgtaatttcagattcctccacttttgatccctc 24837328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 28071792 - 28071760
Alignment:
Q  219 tgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||||||| ||||||||    
T  28071792 tgtaatttcagattcttccactttaggtccctc 28071760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 78; Significance: 2e-36; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 9266978 - 9267090
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||| |||||||||    
T  9266978 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 9267077  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  9267078 cttttggtccctc 9267090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 14171961 - 14171852
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||| ||||||||||||||||||| ||||||||||    
T  14171961 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttctgattcttcca 14171862  T
Q  239 cttttggtcc 248  Q
    ||||||||||    
T  14171861 cttttggtcc 14171852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 14262411 - 14262299
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||| ||| |||||    
T  14262411 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattgttcca 14262312  T
Q  239 cttttggtccctc 251  Q
    ||||| |||||||    
T  14262311 cttttagtccctc 14262299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 35995681 - 35995793
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||           |||| ||||||||||||||||||||||||||||||    
T  35995681 taaatacctcttttcgttcctgtaatattagcgaattccggttttagtccctgtagaattttttttttagattttgtccctgtaatttcagattcttcca 35995780  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  35995781 cttttggtccctc 35995793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 45969918 - 45970026
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||         |||||| ||||||||||||||||||||||||||| ||    
T  45969918 taaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattctttca 45970017  T
Q  239 cttttggtc 247  Q
    |||||||||    
T  45970018 cttttggtc 45970026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 16721994 - 16722105
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||          ||||| ||||||||| ||||||||||||||||||||    
T  16721994 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatttagattttgtccatgtaatttcagattcttcca 16722093  T
Q  239 cttttggtccct 250  Q
    ||||||||||||    
T  16722094 cttttggtccct 16722105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 16722366 - 16722255
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||| | ||||||||||||||         |||||| |||||||||||||||||||| |||||||||    
T  16722366 taaatacctcttttcgtccctgtaatattagcgaatttcagttttagtccctgtacaaaaaaagatttagattttgtccctgtaatttcatattcttcca 16722267  T
Q  239 cttttggtccct 250  Q
    ||||||||||||    
T  16722266 cttttggtccct 16722255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 14262041 - 14262150
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| |||          ||||| ||||||||||||||||||||||||||||||||    
T  14262041 aatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaatatttagattttgtccctgtaatttcagattcttccact 14262140  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  14262141 tttggtccct 14262150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 14162243 - 14162135
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||         |||||| ||||||||| ||||||||||||||||||||||    
T  14162243 aatacctctttttgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaagagatttagattttgtccttgtaatttcagattcttccact 14162145  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  14162144 tttggtccct 14162135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 19113140 - 19113028
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||         |||||| ||||| |||||||||||||||||||||| |    
T  19113140 taaatacctcttttcgtccctataatattaacgaattccggttttagtccctgtaaaaaaaaagatttagattttatccctgtaatttcagattcttcta 19113041  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  19113040 cttttggtccctc 19113028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 33372409 - 33372521
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| ||||||||||||||||||||||||||||||| ||||||||| |||||         |||||| |||||||||||||||||||||||| |||||    
T  33372409 taaatatctcttttcgtccctgtaatattagcgaattctggttttagttcctgtaaataaaaagatttagattttgtccctgtaatttcagattattcca 33372508  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  33372509 cttttggtccctc 33372521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 43572392 - 43572504
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||| ||||||||| ||||||||||||||||||| ||||||||||||||||          ||||| ||||||||||||||||||||||||||||||    
T  43572392 taaatacatcttttcgttcctgtaatattagcgaatttcggttttagtccctgtaaaaagaaaaatttagattttgtccctgtaatttcagattcttcca 43572491  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  43572492 cttttggtccctc 43572504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 246
Target Start/End: Complemental strand, 45970291 - 45970183
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||          ||||||||||||||||||||||||||||||||||||    
T  45970291 taaatacctcttttcgtccctgtaatattagtgaatttcggttttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttcagattcttcc 45970192  T
Q  238 acttttggt 246  Q
    |||||||||    
T  45970191 acttttggt 45970183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 5800977 - 5800869
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||         |||||| ||||||||| |||||||||| |||||||||||    
T  5800977 aatacctcttttcgtccctgtaatattagcgaattccgg-tttagtccctgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttccact 5800879  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  5800878 tttggtccct 5800869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 5800608 - 5800720
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||| |||||| ||||||||||||||||         |||||| ||| |||||||||||||||| |||||||||    
T  5800608 taaatacctcttttcgtccctgtaatattaacgaatttcggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattcttcca 5800707  T
Q  239 cttttggtccctc 251  Q
     ||||||||||||    
T  5800708 tttttggtccctc 5800720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 19112767 - 19112879
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||          |||||| |||||||||||| ||||||| ||||||||    
T  19112767 taaatacctcttttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctggaatttcatattcttcc 19112866  T
Q  238 acttttggtccct 250  Q
    |||||||||||||    
T  19112867 acttttggtccct 19112879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 20854070 - 20853959
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| |||||||||||| ||||||||||||||||| |||||||||||| |||         |||||| ||||||||||||||||||||||||||||||    
T  20854070 taaatatctcttttcgtccatgtaatattagcgaatttcggttttagtcc-tgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 20853972  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  20853971 cttttggtccctc 20853959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 21633271 - 21633159
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||| || |||||||||||||||||||||||| | |||||||||||| |         |||||| ||||||||||||||||||||||||||||||    
T  21633271 taaatacctattctcgtccctgtaatattagcgaatttcagttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 21633172  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  21633171 cttttggtccctc 21633159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 30500415 - 30500304
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||          ||||| |||||||||||||||||||| ||| |||||    
T  30500415 taaatacctcttttcgtccctgtaatattagcgaattccagttttagtccctgtaaaaaaaaa-atttagattttgtccctgtaatttcatattgttcca 30500317  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  30500316 cttttggtccctc 30500304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 33372779 - 33372669
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||| |||||||||||||||| || ||||||| |||||         |||||| ||||||||||||||||||||||||||||||    
T  33372779 taaatacctcttttcgtccccgtaatattagcgaatttcgattttagttcctgttaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 33372680  T
Q  239 cttttggtccc 249  Q
    |||||| ||||    
T  33372679 cttttgatccc 33372669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 248
Target Start/End: Original strand, 11003735 - 11003844
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||| |||| |||||||||| |||||||||||||||||||||||         || ||| ||||||||| ||||||||||||||||||||    
T  11003735 taaatacctctttttgtccttgtaatattaccgaattccggttttagtccctgtaaataaaaagacttagattttgtccttgtaatttcagattcttcca 11003834  T
Q  239 cttttggtcc 248  Q
    ||||||||||    
T  11003835 cttttggtcc 11003844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 236
Target Start/End: Original strand, 19720336 - 19720433
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttc 236  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||| |||||||    
T  19720336 taaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttc 19720433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 30500048 - 30500155
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||          ||||| |||||||||||||||||||| |||||||||||    
T  30500048 aatacctcttttcatccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcatattcttccact 30500145  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  30500146 tttggtccct 30500155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 49986530 - 49986639
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||| ||||          |||||| ||||||||||||||||||||||||||||     
T  49986530 taaatacctcttttcgtccctgtaatattagagaattccggttttagtcactgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttct 49986629  T
Q  238 acttttggtc 247  Q
    ||||||||||    
T  49986630 acttttggtc 49986639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 14161874 - 14161986
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||| ||| |         |||||| ||| |||||||||||||||| |||||||||    
T  14161874 taaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctataaaaaaaaagatttagattatgtccctgtaatttcatattcttcca 14161973  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  14161974 cttttggtccctc 14161986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 45003499 - 45003611
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||| ||||||| |         |||||| ||||||||||||||||||||||||||||||    
T  45003499 taaatatctcttttcgtccccgtaatattagcaaattccggtttcagtccctataaaataaaagatttagattttgtccctgtaatttcagattcttcca 45003598  T
Q  239 cttttggtccctc 251  Q
    ||||| |||||||    
T  45003599 ctttttgtccctc 45003611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 52553063 - 52552951
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||| ||||||||||| ||||||||||||||||||  ||||||||||||||         |||||| |||||||| ||||||||||| |||||||||    
T  52553063 taaatacatcttttcgtccttgtaatattagcgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcatattcttcca 52552964  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  52552963 cttttggtccctc 52552951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 128 - 192
Target Start/End: Complemental strand, 27946251 - 27946187
Alignment:
Q  128 ttataagaggctaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27946251 ttataagagggtaaatacctcttttcgtcccagtaatattagcgaattccggttttagtccctgt 27946187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 20853698 - 20853811
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  ||||||          |||||| ||||||||||| |||||||| ||||||||    
T  20853698 taaatacctcttttcgtccctgtaatattagcgaatttcggttttaaaccctgtaaaaaaaaaagatttagattttgtccctataatttcatattcttcc 20853797  T
Q  238 acttttggtccctc 251  Q
    ||||||||||||||    
T  20853798 acttttggtccctc 20853811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 9267349 - 9267238
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||           |||| |||||||||||||||| ||||||||||| |    
T  9267349 taaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtatataaatt-ttttagattttgtccctgtaatatcagattcttcta 9267251  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  9267250 cttttggtccctc 9267238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 17465742 - 17465630
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||| ||||||||||||||||| | |||||| || ||||          ||||||||||||||||||||| || |||||||| ||    
T  17465742 taaatacctcttttcgtccttgtaatattagcgaatttcagttttaatctctgtaaaataaaatatttaaattttgtccctgtaactttagattctttca 17465643  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  17465642 cttttggtccctc 17465630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 17649384 - 17649277
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||| ||||          |||||| |||||||||||||||||||||||| |||||    
T  17649384 taaatacctcttttcgaccctgtaatactagcgaattccggttttagttcctg-gaaaaaaaagatttagattttgtccctgtaatttcagattattcca 17649286  T
Q  239 cttttggtc 247  Q
    | |||||||    
T  17649285 catttggtc 17649277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 21632904 - 21633011
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||     |||||||||||||         ||| || || |||||||||||||||||||||||| ||    
T  21632904 taaatacctcttttcgtccctgtaatattagcgaat-----ttttagtccctgtaaaaaaaaagatctagatgttgtccctgtaatttcagattctttca 21632998  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  21632999 cttttggtccctc 21633011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 43572765 - 43572654
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||| |||||||||||||  | ||||||||||||||| |||||          ||||| ||| ||||||||||||||||||||||||||    
T  43572765 taaatacctcttttcatccctgtaatattgacaaattccggttttagttcctgtaaaaaaaaa-atttagattctgtccctgtaatttcagattcttcca 43572667  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  43572666 cttttggtccctc 43572654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 4204712 - 4204823
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||| |||||||||||||||||||||||||  ||||| | |||||||| |||||         |||||| ||| ||||||||||||||||||||||||||    
T  4204712 taaagacctcttttcgtccctgtaatattaatgaatttcagttttagttcctgtaaaaaaaa-gatttagattatgtccctgtaatttcagattcttcca 4204810  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  4204811 cttttggtccctc 4204823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 14171590 - 14171701
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||| |  ||||         |||||| |||||||||||||||||||| |||||||||    
T  14171590 taaataccacttttcgtccctgtaatattagcgaattccgattttaatttctgt-aaaaaaaagatttagattttgtccctgtaatttcaaattcttcca 14171688  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  14171689 cttttgatccctc 14171701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 35996050 - 35995942
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||          | ||| | |||||| | |||||||||||||||||||    
T  35996050 taaatacatcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaa---aattagaatttgtctcagtaatttcagattcttcca 35995954  T
Q  239 cttttggtccct 250  Q
    ||||||||||||    
T  35995953 cttttggtccct 35995942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 27946114 - 27946165
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  27946114 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt 27946165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 251
Target Start/End: Complemental strand, 45003859 - 45003759
Alignment:
Q  150 tttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtccc 249  Q
    |||||||||||||||||||||||||| |||||||||| |||||         |||||| |||| |||||| |||||||| ||||||||||||||||||||    
T  45003859 tttcgtccctgtaatattagcgaatttcggttttagttcctgt-aaaaaaaagatttagatttagtccctataatttcatattcttccacttttggtccc 45003761  T
Q  250 tc 251  Q
    ||    
T  45003760 tc 45003759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 36991025 - 36990923
Alignment:
Q  148 cttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtc 247  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||         | |||| ||| |||||||||||||| |||||||||||||||| |||    
T  36991025 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattcttccacttttagtc 36990927  T
Q  248 cctc 251  Q
    ||||    
T  36990926 cctc 36990923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 37016465 - 37016363
Alignment:
Q  148 cttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtc 247  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||         | |||| ||| |||||||||||||| |||||||||||||||| |||    
T  37016465 cttttggtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaag-tttagattctgtccctgtaattttagattcttccacttttagtc 37016367  T
Q  248 cctc 251  Q
    ||||    
T  37016366 cctc 37016363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 15328834 - 15328724
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttaaattttgtccctgtaatttcagattcttccac 239  Q
    ||||||||||||| || ||||||||||||||||||  ||||||||||||  |          |||||| |||||||||||||||||||||||| ||||||    
T  15328834 aatacctcttttcatctctgtaatattagcgaattttggttttagtcccaataaaaaaaaaagatttagattttgtccctgtaatttcagatttttccac 15328735  T
Q  240 ttttggtccct 250  Q
    |||||||||||    
T  15328734 ttttggtccct 15328724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 49986903 - 49986791
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||| |||||           ||||| ||||||| | |||||||||| ||||||||    
T  49986903 taaatacctcttttcgtcccagtaatattagcgaatttcggttttagttcctgtaaaaaaaagaaatttagattttgt-cttgtaatttcatattcttcc 49986805  T
Q  238 acttttggtccctc 251  Q
    ||||||||||||||    
T  49986804 acttttggtccctc 49986791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 251
Target Start/End: Original strand, 35740829 - 35740930
Alignment:
Q  148 cttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtc 247  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||           |||| |||||||||||||||||| | |||||||||||||| |||    
T  35740829 cttttggtccctgtaatattagcgaattccggttttagtccccgtaaaaaaaag--tttagattttgtccctgtaattttaaattcttccacttttagtc 35740926  T
Q  248 cctc 251  Q
    ||||    
T  35740927 cctc 35740930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 38283553 - 38283665
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| |||||||| |||||||||||||| ||||||||||||||||||| |||          ||||| ||||||| ||| |||||||| ||| |||||    
T  38283553 taaatatctcttttcatccctgtaatattaacgaattccggttttagtccttgtaaaaaaaaaaatttagattttgttcctataatttcatattgttcca 38283652  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  38283653 cttttgatccctc 38283665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 52552695 - 52552806
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnn--gatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||| |||||||||||||| |||||||||| |||| || |||||||| ||||           |||||| ||||||||||||||||||||||||||||||    
T  52552695 aatatctcttttcgtccctctaatattagcaaatttcgattttagtctctgtaaaaaaaaatagatttagattttgtccctgtaatttcagattcttcca 52552794  T
Q  239 cttttggtccct 250  Q
    |||||| |||||    
T  52552795 cttttgatccct 52552806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 189
Target Start/End: Complemental strand, 3426021 - 3425973
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccc 189  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||    
T  3426021 aatacctcttttggcccctgtaatattagcgaattccggttttagtccc 3425973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 3424779 - 3424830
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  3424779 aatacctcttttggtccctgtaatattagcgatttccggttttggtccctgt 3424830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 35741957 - 35741906
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||| ||||| |||||||||||||||||||||||| ||||||||||||||    
T  35741957 aataccacttttggtccctgtaatattagcgaattccagttttagtccctgt 35741906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 191
Target Start/End: Complemental strand, 24490294 - 24490242
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctg 191  Q
    |||||| || ||||| ||||||||||||||| |||||||||||||||||||||    
T  24490294 taaatatcttttttcctccctgtaatattagtgaattccggttttagtccctg 24490242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 251
Target Start/End: Complemental strand, 1068955 - 1068912
Alignment:
Q  208 aattttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||| ||||||||||||||||||||| |||||||    
T  1068955 aattttgtccctgtcatttcagattcttccacttttagtccctc 1068912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 244
Target Start/End: Original strand, 17465370 - 17465476
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtc-cctgtaatttcagattcttcc 237  Q
    |||||||||||||| |||| | |||||||||||||||| | ||||||| |||||         |||||| |||| ||| |||||||||||||||||||||    
T  17465370 taaatacctctttttgtccttttaatattagcgaattctgattttagtacctgtaaaaaaaatgatttagatttcgtctcctgtaatttcagattcttcc 17465469  T
Q  238 acttttg 244  Q
    | |||||    
T  17465470 atttttg 17465476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 38283861 - 38283814
Alignment:
Q  203 atttaaattttgtccctgtaatttcagattcttccacttttggtccct 250  Q
    ||||| ||||||||||| |||||||||||||||||||||||| |||||    
T  38283861 atttagattttgtccctataatttcagattcttccacttttgatccct 38283814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 15328466 - 15328519
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    ||||||||||||||||| |||||||||||||  |||| || |||||||||||||    
T  15328466 taaatacctcttttcgttcctgtaatattagtaaatttcgtttttagtccctgt 15328519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 16722173 - 16722210
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||||||||||    
T  16722173 gtccctgtaatttcagattcctccacttttggtccctc 16722210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 49986710 - 49986747
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||||||||||    
T  49986710 gtccctgtaatttcagattcctccacttttggtccctc 49986747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 251
Target Start/End: Complemental strand, 32998497 - 32998397
Alignment:
Q  149 ttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtcc 248  Q
    |||| ||||||||||||||||||||||| ||| ||||| |||||           |||| ||| ||||||||||||||||||||| ||||||||| ||||    
T  32998497 ttttggtccctgtaatattagcgaattctggtgttagttcctgtaaaaaaaag--tttagattctgtccctgtaatttcagattcctccacttttagtcc 32998400  T
Q  249 ctc 251  Q
    |||    
T  32998399 ctc 32998397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 45058803 - 45058755
Alignment:
Q  202 gatttaaattttgtccctgtaatttcagattcttccacttttggtccct 250  Q
    |||||| |||||||| ||||||||||||||||||||| ||||| |||||    
T  45058803 gatttagattttgtctctgtaatttcagattcttccatttttgatccct 45058755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 9267171 - 9267134
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  9267171 gtccttgtaatttcagattcctccacttttggtccctc 9267134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 19112961 - 19112924
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||  |||||||||||||||||    
T  19112961 gtccctgtaatttcagatttctccacttttggtccctc 19112924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 21633078 - 21633115
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  21633078 gtccttgtaatttcagattcctccacttttggtccctc 21633115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 35995878 - 35995837
Alignment:
Q  210 ttttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||  ||| |||||||||||||||||    
T  35995878 ttttgtccctgtaatttcatgttcctccacttttggtccctc 35995837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Original strand, 38283728 - 38283769
Alignment:
Q  210 ttttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||| |||||||||| |||| |||||||||||||||||    
T  38283728 ttttgtccgtgtaatttcaaattcctccacttttggtccctc 38283769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 45970097 - 45970134
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||  |||||||||||||||||    
T  45970097 gtccctgtaatttcagatttctccacttttggtccctc 45970134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 210 - 251
Target Start/End: Complemental strand, 47575472 - 47575431
Alignment:
Q  210 ttttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||||||||| |||| |||||||||| ||||||    
T  47575472 ttttgtccctgtaatttcaaattcctccacttttgatccctc 47575431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 47575646 - 47575593
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    ||||||||||| |||||| | ||||||| || |||||| |||||||||||||||    
T  47575646 taaatacctctattcgtctccgtaatatgagtgaattctggttttagtccctgt 47575593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 14262231 - 14262195
Alignment:
Q  215 tccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||| |||| |||||||||||||||||    
T  14262231 tccctgtaatttcaaattcctccacttttggtccctc 14262195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 57)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 126 - 251
Target Start/End: Original strand, 18462276 - 18462400
Alignment:
Q  126 atttataagaggctaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatt 225  Q
    |||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||    
T  18462276 atttataaaagggtaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatt 18462374  T
Q  226 tcagattcttccacttttggtccctc 251  Q
    ||||||||||||| ||||||||||||    
T  18462375 tcagattcttccatttttggtccctc 18462400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 39826421 - 39826312
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  39826421 taaatacctcttttcgtccatgtaatattagcgaatttcggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcca 39826322  T
Q  239 cttttggtcc 248  Q
    ||||||||||    
T  39826321 cttttggtcc 39826312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 17606679 - 17606572
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||| ||||||||| ||||||||||||||||||||||    
T  17606679 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt--aaaaaaagatttagattttgtccttgtaatttcagattcttccact 17606582  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  17606581 tttggtccct 17606572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 39711447 - 39711335
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||         |||||| |||||||||| ||||||||| |||||||||    
T  39711447 taaatacctcttttcgtccctgtaatattagcgaattctggttttagtccctgtaaaaaaaaagatttagattttgtccccgtaatttcatattcttcca 39711348  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  39711347 cttttggtccctc 39711335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 4906965 - 4907077
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||| ||||||  ||||||||||||||         |||||| |||||||||||||||||||| |||||||||    
T  4906965 taaatacctcttttcgtccctgtaatattagtgaattctagttttagtccctgtaaaaaaaatgatttagattttgtccctgtaatttcatattcttcca 4907064  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  4907065 cttttggtccctc 4907077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 4907337 - 4907225
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| || ||||| ||||||||||||||||||||||| ||||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  4907337 taaatatctattttcctccctgtaatattagcgaattccagttttagtccctgtaaaataaaagatttagattttgtccctgtaatttcagattcttcca 4907238  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  4907237 cttttggtccctc 4907225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 33628693 - 33628805
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| ||         |||||| |||||||||| |||||||||||||||| ||    
T  33628693 taaatacctcttttcgtccctgtaatattagcgaattctggttttagtccccgtaaaaaaaaagatttagattttgtccccgtaatttcagattctttca 33628792  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  33628793 cttttggtccctc 33628805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 52058383 - 52058271
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||| |||||         |||||| ||| ||||||||||||||||||||||||||    
T  52058383 taaatacctcttttcgtccctgtaatattagcgaattttggttttagttcctgtagaaaaaaagatttagattatgtccctgtaatttcagattcttcca 52058284  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  52058283 cttttggtccctc 52058271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 24467632 - 24467743
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||| |||||||||||||||||||||||||||||||  |||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  24467632 taaatacatcttttcgtccctgtaatattagcgaattccaattttagtccctgtaaaaaaaa-gatttagattttgtccctgtaatttcagattcttcca 24467730  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  24467731 cttttggtccctc 24467743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 141 - 251
Target Start/End: Complemental strand, 33629063 - 33628953
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||          | ||  ||||||||||||||||||||||||||||||||    
T  33629063 aatacctctttttgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaatttgattttgtccctgtaatttcagattcttccact 33628964  T
Q  241 tttggtccctc 251  Q
    |||||||||||    
T  33628963 tttggtccctc 33628953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 39826053 - 39826165
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||| | ||||||||||||||| || |||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  39826053 taaatacctcttttcgtccatataatattagcgaatttcgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 39826152  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  39826153 cttttgatccctc 39826165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 24467999 - 24467890
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||   | ||||||||||| ||||||||||||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  24467999 taaatacctcttttc---catgtaatattagtgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcca 24467903  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  24467902 cttttggtccctc 24467890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 8292807 - 8292919
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| ||||||||||||||||| ||||||||||| |||||||||||||||||         |||||| |||||||||||| ||||||| |||||||||    
T  8292807 taaataactcttttcgtccctgtactattagcgaatcccggttttagtccctgtaaaataaaagatttagattttgtccctgaaatttcatattcttcca 8292906  T
Q  239 cttttggtccctc 251  Q
    |||||||| ||||    
T  8292907 cttttggttcctc 8292919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 30299606 - 30299494
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||| |||||||| ||||||||||||| |||| |||||||||| |||||         |||||| |||||||||||||||||| |||||||||||    
T  30299606 taaatacctattttcgtctctgtaatattagcaaatttcggttttagttcctgtaaaaaaaaagatttagattttgtccctgtaattttagattcttcca 30299507  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  30299506 cttttggtccctc 30299494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 52058014 - 52058126
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||| |||||||||| |||||||||||||||||  ||||         |||||| | | ||||||||||||||||||||||||||    
T  52058014 taaatacctcttttcgtccttgtaatattaacgaattccggttttagtttctgtaaaaaaaaagatttagactatgtccctgtaatttcagattcttcca 52058113  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  52058114 cttttggtccctc 52058126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 17606307 - 17606423
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt----nnnnnnnnngatttaaattttgtccctgtaatttcagattct 234  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||             |||||| ||||||| |||||||||||| |||||    
T  17606307 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaaaaaagatttagattttgttcctgtaatttcatattct 17606406  T
Q  235 tccacttttggtccctc 251  Q
    |||||||||||||||||    
T  17606407 tccacttttggtccctc 17606423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 18462658 - 18462551
Alignment:
Q  140 aaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccac 239  Q
    |||||||||||||| |||||||||||||||| ||||||||||||||| | |||         |||||| |||||||||| ||||||||||||||||||||    
T  18462658 aaatacctcttttcctccctgtaatattagcaaattccggttttagttcttgtataaaaaaagatttagattttgtccccgtaatttcagattcttccac 18462559  T
Q  240 ttttggtc 247  Q
    ||||||||    
T  18462558 ttttggtc 18462551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 39711077 - 39711187
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||  ||||||||||||||||||||||||||||||||||         |||||| ||||||||| |||||||||| |||||||||    
T  39711077 taaatacctcttttcgtct-tgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccttgtaatttcatattcttcca 39711174  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  39711175 cttttggtccctc 39711187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 8293183 - 8293070
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||||||||||||||||| |||||||| |||||||  ||||||||||||||          |||||| |||||||||||||||||||| ||||||||    
T  8293183 taaatacctcttttcgtccctataatattaacgaattctagttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 8293084  T
Q  238 acttttggtccctc 251  Q
    ||||||||||||||    
T  8293083 acttttggtccctc 8293070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 30299235 - 30299342
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||| | || ||||||| |||||         |||||| |||||||||||||||||||| |||||||||    
T  30299235 taaatacctcttttcgtccctgtaatattagcgaacttcgattttagt-cctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 30299333  T
Q  239 cttttggtc 247  Q
    |||||||||    
T  30299334 cttttggtc 30299342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 34749480 - 34749368
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||| ||| ||||||||||| ||||||||| ||||||||| |||         |||||| ||||| ||||||||||||||||||||||||    
T  34749480 taaatacctctttttgtctctgtaatattatcgaattccgattttagtccttgtaaaaaaaaagatttagattttatccctgtaatttcagattcttcca 34749381  T
Q  239 cttttggtccctc 251  Q
    |||||||| ||||    
T  34749380 cttttggtacctc 34749368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 39971021 - 39970909
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||||||||          |||||| |||||||||||||||||| |||| |||||    
T  39971021 taaatacctcttttcgtccatgtaatattaacgaatttcggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaattttagatccttcc 39970922  T
Q  238 acttttggtccct 250  Q
    |||||||||||||    
T  39970921 acttttggtccct 39970909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 243
Target Start/End: Original strand, 29696568 - 29696671
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||         |||||| |||||||||| ||||||||| |||||||||    
T  29696568 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtctctgt-aaaaaaaagatttagattttgtccccgtaatttcatattcttcca 29696666  T
Q  239 ctttt 243  Q
    |||||    
T  29696667 ctttt 29696671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 18342392 - 18342282
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||          ||||||||||| | | |||||||||| |||||||||    
T  18342392 taaataccttttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaa--atttaaattttattcttgtaatttcatattcttcca 18342295  T
Q  239 cttttggtccctc 251  Q
    ||||| |||||||    
T  18342294 cttttagtccctc 18342282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 29696932 - 29696821
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||   ||||||||||||||||||||||||||||| ||||          ||| | ||||||||| ||||||||||||||||||||    
T  29696932 taaatacctcttttcgtttatgtaatattagcgaattccggttttagtcactgtaaaaaaaaaaatt-agattttgtccatgtaatttcagattcttcca 29696834  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  29696833 cttttggtccctc 29696821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 34749141 - 34749252
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||| ||||||| |||||||||||||||||||||| | ||||||||||| |         |||||| |||||||||| ||||||||| |||||||||    
T  34749141 taaatacatcttttcatccctgtaatattagcgaattctgattttagtccctataaaaaaaa-gatttagattttgtccccgtaatttcatattcttcca 34749239  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  34749240 cttttggtccctc 34749252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 141 - 251
Target Start/End: Original strand, 48071966 - 48072076
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||| |||||||||| | |||||||||||||||||| ||||||||| |||||         |||||| |||||||||||||||||||| ||| |||||||    
T  48071966 aatatctcttttcgttcatgtaatattagcgaattctggttttagttcctgtaataaaaaagatttagattttgtccctgtaatttcatattattccact 48072065  T
Q  241 tttggtccctc 251  Q
    |||| ||||||    
T  48072066 tttgctccctc 48072076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 245
Target Start/End: Complemental strand, 48072336 - 48072230
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||  ||||||||||| |||||||||||||||||| |||          ||||| ||| |||||||||||||||| |||||||||    
T  48072336 taaatacctcttttcgtcattgtaatattagtgaattccggttttagtccttgtaaaaaaaaatatttagattatgtccctgtaatttcatattcttcca 48072237  T
Q  239 cttttgg 245  Q
    |||||||    
T  48072236 cttttgg 48072230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 130 - 192
Target Start/End: Original strand, 20995692 - 20995754
Alignment:
Q  130 ataagaggctaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||| ||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||    
T  20995692 ataatagggtaaatacctcttttcatctctgtaatattagcgaattccggttttagtccctgt 20995754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 20996040 - 20995932
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||||||||||| ||||||||||||||||||||||   |||||||||| |||         |||||| |||||||| ||||||||||| |||||||||||    
T  20996040 aatacctctttttgtccctgtaatattagcgaattttagttttagtccatgtaaaaaaaa-gatttagattttgtctctgtaatttcatattcttccact 20995942  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  20995941 tttggtccct 20995932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 155 - 251
Target Start/End: Original strand, 42510034 - 42510129
Alignment:
Q  155 tccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||||||||||||| |||||||          ||||| |||||||||||||||||||| |||||||||||||| |||||||    
T  42510034 tccctgtaatattagcgaattccggttttaatccctgtaaaaaaata-atttagattttgtccctgtaatttcatattcttccacttttagtccctc 42510129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 30252275 - 30252161
Alignment:
Q  139 taaatacctcttttc--gtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttc 236  Q
    ||||||||||||| |  |||||| |||||||||||||||| |||||||||||||||         |||||| |||||||||| ||||||||| |||||||    
T  30252275 taaatacctctttccttgtccctataatattagcgaattctggttttagtccctgtaaaaataaagatttagattttgtccccgtaatttcatattcttc 30252176  T
Q  237 cacttttggtccctc 251  Q
    || ||||| ||||||    
T  30252175 catttttgatccctc 30252161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 43539350 - 43539462
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| |||||||| ||| ||||| |||||| ||||||| ||||||||| |||         |||||| |||||||||||||||||| | ||| |||||    
T  43539350 taaatatctcttttcatccatgtaagattagcaaattccgattttagtccttgtaaaaaaaacgatttagattttgtccctgtaattttatattgttcca 43539449  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  43539450 cttttggtccctc 43539462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 17502095 - 17501993
Alignment:
Q  148 cttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtc 247  Q
    ||||| |||| |||||||||||||||||||||||||||||||| |         | |||| ||| ||||||||||||||||||||| ||||||||| |||    
T  17502095 cttttggtccttgtaatattagcgaattccggttttagtccctataaaaaaaaag-tttagattctgtccctgtaatttcagattcctccacttttagtc 17501997  T
Q  248 cctc 251  Q
    ||||    
T  17501996 cctc 17501993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 188
Target Start/End: Original strand, 27039643 - 27039690
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 188  Q
    |||||||||||||||||||||||||| |||||||||||||||| ||||    
T  27039643 aatacctcttttcgtccctgtaatatgagcgaattccggttttggtcc 27039690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 42510388 - 42510341
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 188  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||    
T  42510388 aataccacttttggtccctgtaatattagcgaattccggttttagtcc 42510341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 43539720 - 43539669
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||| |||||    
T  43539720 aatagctcttttcgtccctgtaatattagcaaattccggttttagttcctgt 43539669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 39970648 - 39970761
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||||||||||||||| |||||||||| |||||| |  ||||| || ||||          |||||| ||||||||  |||||||||||||||||||    
T  39970648 taaatacctcttttcgtccatgtaatattaacgaatttcaattttaatctctgtaaaaaaaaaagatttagattttgtctatgtaatttcagattcttcc 39970747  T
Q  238 acttttggtccctc 251  Q
    ||||||||||||||    
T  39970748 acttttggtccctc 39970761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 141 - 190
Target Start/End: Original strand, 37236723 - 37236772
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccct 190  Q
    |||| ||||||| ||||||||||||| |||||||||||||||||||||||    
T  37236723 aatatctcttttggtccctgtaatatgagcgaattccggttttagtccct 37236772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 13230107 - 13230059
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtc 187  Q
    |||||||||||||||||| ||| |||||||||||||| |||||||||||    
T  13230107 taaatacctcttttcgtctctgaaatattagcgaatttcggttttagtc 13230059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 17500782 - 17500825
Alignment:
Q  149 ttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    
T  17500782 ttttggtccctgtaatattagcgaattccggttttagtctctgt 17500825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 43400758 - 43400809
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||||||||||||| || |||||| |||||||||||||||| ||||||||    
T  43400758 aatacctcttttcgtctctataatatgagcgaattccggttttggtccctgt 43400809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 42510210 - 42510173
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||||||||||    
T  42510210 gtccctgtaatttcagattcctccacttttggtccctc 42510173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 159 - 250
Target Start/End: Complemental strand, 16294302 - 16294211
Alignment:
Q  159 tgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtccct 250  Q
    |||||||||||| |||| || |||||||||||||          ||||| ||||||||| |||||||||| |||| ||||||||||||||||    
T  16294302 tgtaatattagcaaatttcgattttagtccctgtaaaataaaaaatttagattttgtccttgtaatttcatattcctccacttttggtccct 16294211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 34749332 - 34749296
Alignment:
Q  215 tccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||||||||| |||||||||||||||||    
T  34749332 tccctgtaatttcagattcctccacttttggtccctc 34749296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 48072144 - 48072180
Alignment:
Q  215 tccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||||||||| |||||||||||||||||    
T  48072144 tccctgtaatttcagattcctccacttttggtccctc 48072180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 26271258 - 26271207
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||||||||| ||||| |||||||||||||| | ||||||| ||||||||    
T  26271258 aatacctcttttagtcccagtaatattagcgaaattcggttttggtccctgt 26271207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 251
Target Start/End: Original strand, 7473869 - 7473907
Alignment:
Q  213 tgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  7473869 tgtctctgtaatttcatattcttccacttttggtccctc 7473907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 13229916 - 13229950
Alignment:
Q  217 cctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||||||| |||||||||||||||||    
T  13229916 cctgtaatttcagattcctccacttttggtccctc 13229950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 4907158 - 4907121
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  4907158 gtccctgtaatttcagattcatccacttttagtccctc 4907121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 17606490 - 17606527
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  17606490 gtccctgtaatttcaaattcctccacttttggtccctc 17606527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 29696745 - 29696782
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||| |||||||||| |||||||||||||||||    
T  29696745 gtccctgtattttcagattcctccacttttggtccctc 29696782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 33628886 - 33628849
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| || ||||||||||||||    
T  33628886 gtccctgtaatttcagattcctctacttttggtccctc 33628849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 39711254 - 39711291
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  39711254 gtccctgtaatttcggattcctccacttttggtccctc 39711291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 43539652 - 43539611
Alignment:
Q  209 attttgtccctgtaatttcagattcttccacttttggtccct 250  Q
    ||||||||| |||||||||| ||||||||| |||||||||||    
T  43539652 attttgtccatgtaatttcaaattcttccagttttggtccct 43539611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 251
Target Start/End: Original strand, 30299418 - 30299450
Alignment:
Q  219 tgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||||| |||||||||||||||||    
T  30299418 tgtaatttcagattcctccacttttggtccctc 30299450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 39970837 - 39970805
Alignment:
Q  219 tgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||||| |||||||||||||||||    
T  39970837 tgtaatttcagattcatccacttttggtccctc 39970805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 9618983 - 9619095
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  9618983 taaatacctattttcgtccatgtaatattagcgaattccggttttagtccctgtaaaaacaaagatttagattttgtccctgtaatttcagattcttcca 9619082  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  9619083 cttttggtccctc 9619095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 38574343 - 38574231
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||         |||||| |||||||||||||||||||| |||||||||    
T  38574343 taaataccttttttcgtccctgtaatattagcgaattctggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcatattcttcca 38574244  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  38574243 cttttggtccctc 38574231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 46046798 - 46046687
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  46046798 taaatacct-ttttcgtccctgtaatattagcgaattccggttttagtccctgtaaataaaaagatttagattttgtccctgtaatttcagattcttcca 46046700  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  46046699 cttttgatccctc 46046687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 3018014 - 3018127
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||          |||||| |||||||||||||||||||| ||||||||    
T  3018014 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcccggtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 3018113  T
Q  238 acttttggtccctc 251  Q
    ||||||||||||||    
T  3018114 acttttggtccctc 3018127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 9516613 - 9516725
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||         |||||| ||||||||| |||||||||| |||||||||    
T  9516613 taaatatctcttttcgtccctgtaatattagcgaattccggttttagtccttgtaaaaaaaaagatttagattttgtccttgtaatttcatattcttcca 9516712  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  9516713 cttttggtccctc 9516725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 9516985 - 9516873
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||| ||||         |||||| |||||||||||||||||||||||||||| |    
T  9516985 taaatatctcttttcgtccctgtaatattagcgaatttcggttttagtctctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttcta 9516886  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  9516885 cttttggtccctc 9516873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 34063985 - 34064097
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||| |||||||  ||||||||||||||         |||||| |||||||| |||||||||||||||||||||    
T  34063985 taaatacctcttttcgtccctgtaatattaacgaattctagttttagtccctgtaaaaaaaaagatttagattttgtctctgtaatttcagattcttcca 34064084  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  34064085 cttttggtccctc 34064097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 35376502 - 35376391
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| ||||||||||||||||||||||||| |||||| ||||||||||||||         ||||||||||||||||||||||||||||| |||||||    
T  35376502 taaatatctcttttcgtccctgtaatattagcaaattccagttttagtccctgtaaaaaaaa-gatttaaattttgtccctgtaatttcagaatcttcca 35376404  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  35376403 cttttggtccctc 35376391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 139 - 249
Target Start/End: Complemental strand, 26252612 - 26252502
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||| |||||         |||||| |||||||||||||||||||| |||||||||    
T  26252612 taaatatctcttttcgtccctgtaatattagcgaattccagttttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 26252513  T
Q  239 cttttggtccc 249  Q
    |||||||||||    
T  26252512 cttttggtccc 26252502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 245
Target Start/End: Complemental strand, 9397073 - 9396968
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||||||         |||||| ||||||||||||||||||||||||||||||    
T  9397073 taaatacttcttttcgtccctgtaatattagcaaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcagattcttcca 9396975  T
Q  239 cttttgg 245  Q
    |||||||    
T  9396974 cttttgg 9396968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 9619354 - 9619245
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||         |||||| ||||||||| |||||||||| |||||||||    
T  9619354 taaatacctctttttgtccctgtaatattagcgaattctggttttagtccctgtagaaaaaaagatttagattttgtccttgtaatttcatattcttcca 9619255  T
Q  239 cttttggtcc 248  Q
    ||||||||||    
T  9619254 cttttggtcc 9619245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 15640724 - 15640830
Alignment:
Q  144 acctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccactttt 243  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||         |||||| |||||||||||||||||||| |||||| |||||||    
T  15640724 acctcttttcgtccctgtaatattagcgaattccggttttagttcctgt-aaaaaaaagatttagattttgtccctgtaatttcatattctttcactttt 15640822  T
Q  244 ggtccctc 251  Q
    ||||||||    
T  15640823 ggtccctc 15640830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 9396702 - 9396814
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||| || |||||||| ||||         |||||| ||||||||||| |||||||| ||| |||||    
T  9396702 taaatacctcttttcgtccctgtaatattagcgaatttcgattttagtctctgttaaaaaaaagatttagattttgtccctataatttcaaatttttcca 9396801  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  9396802 cttttggtccctc 9396814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 31090436 - 31090324
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| |||||||||||||||||||||||||||||| || |||||||||||||          | ||| |||||||||||||||||||||||||||| |    
T  31090436 taaatatctcttttcgtccctgtaatattagcgaatttcgattttagtccctgtaaaaaaaaaaaattagattttgtccctgtaatttcagattcttcta 31090337  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  31090336 cttttggtccctc 31090324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 251
Target Start/End: Original strand, 38573967 - 38574083
Alignment:
Q  134 gaggctaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattc 233  Q
    |||| ||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||         |||||| |||||||||||||||||||| ||||    
T  38573967 gagggtaaatacctcttttcgtccatgtaatattagtgaattccgattttaatccctgtaaaaaaaa-gatttagattttgtccctgtaatttcatattc 38574065  T
Q  234 ttccacttttggtccctc 251  Q
    ||||||||||||||||||    
T  38574066 ttccacttttggtccctc 38574083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 48259826 - 48259938
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc- 237  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||         |||||| ||||||||| ||||||||||||||| |||     
T  48259826 taaatatctcttttcgtccctgtaatattagcgaattccggttttaatccctgtaaataaaaagatttagattttgtccatgtaatttcagattcctcct 48259925  T
Q  238 acttttggtccct 250  Q
    |||||||||||||    
T  48259926 acttttggtccct 48259938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 35376166 - 35376273
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||| |||||||||||||||||||||||||||| |||||||||||||||         |||||| |||||||| ||||||||| |||||||||||    
T  35376166 taaatacctattttcgtccctgtaatattagcgaattctggttttagtccctgt-aaaaaaaagatttagattttgtctctgtaattttagattcttcca 35376264  T
Q  239 cttttggtc 247  Q
    |||||||||    
T  35376265 cttttggtc 35376273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 31943959 - 31944061
Alignment:
Q  146 ctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttg 244  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||          |||||| |||||||||||||||||||| |||||||||||||||    
T  31943959 ctcttttcgtccctgtaatattagcgaattccggttttagttcctgtaaataaaaaagatttagattttgtccctgtaatttcatattcttccacttttg 31944058  T
Q  245 gtc 247  Q
    |||    
T  31944059 gtc 31944061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 251
Target Start/End: Complemental strand, 48580239 - 48580129
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||   |         |||||| |||||||||||||||||||| ||| |||||||    
T  48580239 aatacctcttttcgtccctgtaatattagcgaattccggttttaatcctgataaaaaaaacgatttagattttgtccctgtaatttcatattgttccact 48580140  T
Q  241 tttggtccctc 251  Q
    |||||||||||    
T  48580139 tttggtccctc 48580129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 37012712 - 37012821
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    ||||||||||||||||| ||||||||||||||||||   ||| ||||| |||         |||||| ||||||||||||||||||||||||||||||||    
T  37012712 aatacctcttttcgtccttgtaatattagcgaattctaatttcagtccttgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 37012811  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  37012812 tttggtccct 37012821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 7819018 - 7819129
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||| || | |||||||||||||||||||||||||||  |||         |||||| ||||||||||||||||||||||||||||||    
T  7819018 taaatacctcttttcgaccatataatattagcgaattccggttttagtca-tgtaaataaaaagatttagattttgtccctgtaatttcagattcttcca 7819116  T
Q  239 cttttggtccctc 251  Q
    |||||||| ||||    
T  7819117 cttttggttcctc 7819129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 31218356 - 31218303
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31218356 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 31218303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 37013081 - 37012974
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||| ||||||||||||||||||||||||||| |||||||||||||||          | ||| |||||||||||||||||||| |||||||||    
T  37013081 taaatacctcatttcgtccctgtaatattagcgaattctggttttagtccctgtataaaaaaa-aattagattttgtccctgtaatttcatattcttcca 37012983  T
Q  239 cttttggtc 247  Q
    |||||||||    
T  37012982 cttttggtc 37012974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 3273993 - 3273883
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||| |||||||||||||||| |||||||||||||| |         |||||| ||||| ||||||||||||||||||||||||    
T  3273993 taaatacctcttttcgtccc-gtaatattagcgaatttcggttttagtccctat-aaaaaaaagatttagattttatccctgtaatttcagattcttcca 3273896  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  3273895 cttttgatccctc 3273883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 3273624 - 3273737
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatt-taaattttgtccctgtaatttcagattcttcc 237  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||           || || |||||||||||||||||||| ||||||||    
T  3273624 taaatatctcttttcgtccctgtaatattagcgaattccgattttagtccccgtaatttttttttttatagattttgtccctgtaatttcatattcttcc 3273723  T
Q  238 acttttggtccctc 251  Q
    ||||||||||||||    
T  3273724 acttttggtccctc 3273737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 15641091 - 15640978
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||| | |||||          |||||| ||| |||||||||||||||||||||||||    
T  15641091 taaatacctcttttcgtccttgtaatattagtgaattccggttttaattcctgtaaaaaaaaaagatttagattatgtccctgtaatttcagattcttcc 15640992  T
Q  238 acttttggtccctc 251  Q
    ||||||||| ||||    
T  15640991 acttttggttcctc 15640978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 31090063 - 31090176
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnn-gatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||| |||||| |||||||||||||||| ||||| || |||||||||||||          |||||| |||||||||||||||||||| ||||||||    
T  31090063 taaatacttctttttgtccctgtaatattagtgaatttcgattttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcatattcttcc 31090162  T
Q  238 acttttggtccctc 251  Q
    ||||||||||||||    
T  31090163 acttttggtccctc 31090176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 191
Target Start/End: Original strand, 41946959 - 41947020
Alignment:
Q  130 ataagaggctaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctg 191  Q
    |||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41946959 ataaaagggtaaatacctcttttcgtccctgtaatattagtgaattccggttttagtccctg 41947020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 46046433 - 46046539
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||||||||          |  || |||||||||||||||||||| |||||||||    
T  46046433 taaataccttttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaa------aaatagattttgtccctgtaatttcatattcttcca 46046526  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  46046527 cttttgatccctc 46046539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 139 - 250
Target Start/End: Complemental strand, 13132314 - 13132205
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||| ||||||||||||||||||||||||||| || ||||||| |||||         |||||| ||| |||||||||||||||| |||||||||    
T  13132314 taaatacctattttcgtccctgtaatattagcgaatttcgattttagt-cctgt-aaaaaaaagatttagattctgtccctgtaatttcatattcttcca 13132217  T
Q  239 cttttggtccct 250  Q
    ||||||||||||    
T  13132216 cttttggtccct 13132205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 250
Target Start/End: Complemental strand, 4356261 - 4356145
Alignment:
Q  133 agaggctaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagatt 232  Q
    ||||||| ||||||||||||| ||||||||||||||||||||| |||||||| || ||||          ||||  |||||||| ||||||||||| |||    
T  4356261 agaggcttaatacctcttttcatccctgtaatattagcgaatttcggttttaatctctgtaataaaaaaaattt-gattttgtctctgtaatttcaaatt 4356163  T
Q  233 cttccacttttggtccct 250  Q
    ||||||||||||||||||    
T  4356162 cttccacttttggtccct 4356145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 154 - 251
Target Start/End: Original strand, 43312227 - 43312324
Alignment:
Q  154 gtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||||||| ||||||| |||||||||||||          ||||||||| ||||||||||||||||||||| ||||||||| |||||||    
T  43312227 gtccctgtaatattagcaaattccgattttagtccctgtaaaaaaaaaaatttaaattctgtccctgtaatttcagattcctccacttttagtccctc 43312324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 48579871 - 48579980
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||||||||||||||||||||||||||| |||| | |||||||||||  |||         |||||| |||||||| |||||||||||||||||| || |    
T  48579871 aatacctcttttcgtccctgtaatattaacgaagttcggttttagtctatgtaaaaaaaaagatttagattttgtctctgtaatttcagattctttcaat 48579970  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  48579971 tttggtccct 48579980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 3018383 - 3018276
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||| ||||||||||||||||||||||| |||||| ||||||||||||||||         |||||| | ||||||| |||||||||||||||| |||||    
T  3018383 aatatctcttttcgtccctgtaatattaacgaatttcggttttagtccctgt-aaaaaaaagatttaga-tttgtccgtgtaatttcagattctaccact 3018286  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  3018285 tttggtccct 3018276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 12904750 - 12904857
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| |||||||||||||| |||||||||||||||  |||||||||||||||          ||||| ||||||||| | ||||||||||||||||||    
T  12904750 taaatatctcttttcgtccctataatattagcgaattttggttttagtccctgtaaaaaaaaa-atttagattttgtccttataatttcagattcttcca 12904848  T
Q  239 cttttggtc 247  Q
    |||||||||    
T  12904849 cttttggtc 12904857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 136 - 251
Target Start/End: Original strand, 13131940 - 13132056
Alignment:
Q  136 ggctaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattct 234  Q
    |||||||||||||||||||||| |||||||||| |||||| | ||||||||||||||          |||||| ||| ||| | ||||||||||||||||    
T  13131940 ggctaaatacctcttttcgtccttgtaatattaacgaatttctgttttagtccctgtaaaaaaaaaagatttagattatgttcatgtaatttcagattct 13132039  T
Q  235 tccacttttggtccctc 251  Q
    |||||||||| ||||||    
T  13132040 tccacttttgatccctc 13132056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 31944325 - 31944213
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||| ||||||||||| ||||||||||||||||| ||||||||||| ||||          | ||| ||||||||| |||||||||| |||||||||    
T  31944325 taaatacttcttttcgtccttgtaatattagcgaatttcggttttagtctctgtaaaaaaaaataattagattttgtccatgtaatttcatattcttcca 31944226  T
Q  239 cttttggtccctc 251  Q
    ||||| |||||||    
T  31944225 ctttttgtccctc 31944213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 26252341 - 26252383
Alignment:
Q  209 attttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26252341 attttgtccctgtaatttcagattcttccacttttggtccctc 26252383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 41947229 - 41947180
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 188  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  41947229 taaatatctcttttcgtccctgtaatattagcgaatttcggttttagtcc 41947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 244
Target Start/End: Complemental strand, 48260125 - 48260021
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| ||||||||||||||||||||||||||||||  | ||||| || ||||         |||||| |||||||||||||||||||| |||||||||    
T  48260125 taaatatctcttttcgtccctgtaatattagcgaattttgattttaatctctgtaaaaaaaa-gatttagattttgtccctgtaatttcaaattcttcca 48260027  T
Q  239 cttttg 244  Q
    ||||||    
T  48260026 cttttg 48260021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 34064294 - 34064246
Alignment:
Q  202 gatttaaattttgtccctgtaatttcagattcttccacttttggtccct 250  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  34064294 gatttagattttgtctctgtaatttcagattcttccacttttggtccct 34064246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 184
Target Start/End: Complemental strand, 18667663 - 18667620
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggtttta 184  Q
    ||||||||||||||||||||||||||||||||||||| ||||||    
T  18667663 aatacctcttttcgtccctgtaatattagcgaattccagtttta 18667620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 36887685 - 36887736
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  36887685 aatacctcttttggtccctgtaatattagcgaattttggttttagtccctgt 36887736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 7819319 - 7819277
Alignment:
Q  209 attttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  7819319 attttgtccctgtaatgtcagattcttccacttttggtccctc 7819277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 18713335 - 18713224
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtc---cctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||||||||||| |||||| ||||||||| || |||||||||||   |||||         |||||| |||||||| ||||||||||||||||||||    
T  18713335 aatacctcttttcgtacctgtattattagcgagtttcggttttagtcgtccctgtaaaaaaaa-gatttagattttgtctctgtaatttcagattcttcc 18713237  T
Q  238 acttttggtccct 250  Q
    | |||||||||||    
T  18713236 agttttggtccct 18713224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 148 - 249
Target Start/End: Complemental strand, 31083463 - 31083362
Alignment:
Q  148 cttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtc 247  Q
    ||||||||||||||||||| |||||||||||||||| || || ||          ||||| ||||||||||| | |||| ||||||||||||||||||||    
T  31083463 cttttcgtccctgtaatatgagcgaattccggttttggttccagtaaaaaataaaatttagattttgtccctatcatttgagattcttccacttttggtc 31083364  T
Q  248 cc 249  Q
    ||    
T  31083363 cc 31083362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 43313584 - 43313533
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||| ||||| ||| ||||||||||||||||||| |||||||||||||||    
T  43313584 aataccacttttggtctctgtaatattagcgaattctggttttagtccctgt 43313533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 53896451 - 53896502
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    ||||||||||||  || ||||||||| |||||||||||||||||||||||||    
T  53896451 aatacctcttttgatcgctgtaatatgagcgaattccggttttagtccctgt 53896502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 141 - 251
Target Start/End: Original strand, 4355887 - 4355996
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||||||||||| || | | |||||||||||||||||||||||||| |||||         | |||| ||||||||  |||||||||| |||||| ||||    
T  4355887 aatacctctttttgttcatataatattagcgaattccggttttagttcctgt-aaaaacaagctttagattttgtctatgtaatttcatattctttcact 4355985  T
Q  241 tttggtccctc 251  Q
    |||||||||||    
T  4355986 tttggtccctc 4355996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 51029141 - 51029095
Alignment:
Q  146 ctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    ||||||| ||||||||||||| |||||||| ||||||||||||||||    
T  51029141 ctcttttggtccctgtaatatgagcgaatttcggttttagtccctgt 51029095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 9516806 - 9516769
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||||||||||    
T  9516806 gtccctgtaatttcagattcctccacttttggtccctc 9516769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 18713026 - 18713075
Alignment:
Q  202 gatttaaattttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||| |||||||||||||||||||| ||| ||||| ||||||||||||    
T  18713026 gatttagattttgtccctgtaatttcatattgttccaattttggtccctc 18713075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 20069673 - 20069620
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||| | ||||||||||||||||||| |||||||||| ||||| ||||||||    
T  20069673 taaatatcccttttcgtccctgtaatatgagcgaattccagttttggtccctgt 20069620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 7819395 - 7819347
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtc 187  Q
    |||||| || |||||||||| |||||||||||||||| |||||||||||    
T  7819395 taaatatcttttttcgtcccggtaatattagcgaatttcggttttagtc 7819347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 12520643 - 12520691
Alignment:
Q  142 atacctcttttcgtccctgtaatattagcgaattccggttttagtccct 190  Q
    ||||| ||||| |||||| ||||||||||||||||| ||||||||||||    
T  12520643 ataccacttttagtccctataatattagcgaattccagttttagtccct 12520691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 36888991 - 36888943
Alignment:
Q  203 atttaaattttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||| ||| ||||||||||||||||||||| ||||||||| |||||||    
T  36888991 atttagattatgtccctgtaatttcagattcctccacttttagtccctc 36888943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 177
Target Start/End: Complemental strand, 50462769 - 50462733
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattcc 177  Q
    |||||||||||| ||||||||||||||||||||||||    
T  50462769 aatacctcttttggtccctgtaatattagcgaattcc 50462733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 9619161 - 9619198
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  9619161 gtccctgtaatttcagattcctccacttttgctccctc 9619198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 18667594 - 18667553
Alignment:
Q  209 attttgtccctgtaatttcagattcttccacttttggtccct 250  Q
    |||||| ||||||||||||||||||||||| |||| ||||||    
T  18667594 attttgaccctgtaatttcagattcttccagtttttgtccct 18667553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 31082188 - 31082241
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||||| |||||||||||| |||||| |||||||||| | ||| ||||||||    
T  31082188 taaataccccttttcgtccctataatatgagcgaattccaggtttggtccctgt 31082241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 31944132 - 31944169
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||| ||||||||||||||| |||||||||||||||||    
T  31944132 gtccatgtaatttcagattcctccacttttggtccctc 31944169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 34064178 - 34064141
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| ||||||||| |||||||    
T  34064178 gtccctgtaatttcagattcctccacttttagtccctc 34064141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 209 - 250
Target Start/End: Complemental strand, 41947161 - 41947120
Alignment:
Q  209 attttgtccctgtaatttcagattcttccacttttggtccct 250  Q
    ||||||||| |||||||||| ||| |||||||||||||||||    
T  41947161 attttgtccttgtaatttcatatttttccacttttggtccct 41947120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 46046620 - 46046583
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  46046620 gtccctgtaatttcagattcctccacttttgatccctc 46046583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 251
Target Start/End: Original strand, 9396882 - 9396918
Alignment:
Q  215 tccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||| |||| |||||||||||||||||    
T  9396882 tccctgtaatttcatattcctccacttttggtccctc 9396918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 188
Target Start/End: Original strand, 46934083 - 46934123
Alignment:
Q  148 cttttcgtccctgtaatattagcgaattccggttttagtcc 188  Q
    ||||| ||||||||||||||| | |||||||||||||||||    
T  46934083 cttttggtccctgtaatattaacaaattccggttttagtcc 46934123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 141 - 248
Target Start/End: Complemental strand, 12355 - 12248
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |         |||||| ||||||||||||||||||||||||||||||||    
T  12355 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctataaaaaaaaagatttagattttgtccctgtaatttcagattcttccact 12256  T
Q  241 tttggtcc 248  Q
    ||||||||    
T  12255 tttggtcc 12248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 9481185 - 9481297
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||| ||| |||||||||||||||| |||||||||    
T  9481185 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatattcttcca 9481284  T
Q  239 cttttggtccctc 251  Q
     ||||||||||||    
T  9481285 attttggtccctc 9481297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 32017878 - 32017767
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||         |||||| |||||||||||||||||||| |||||||||    
T  32017878 taaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcatattcttcca 32017780  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  32017779 cttttggtccctc 32017767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 18500318 - 18500429
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||         |||||| |||||||||||||||||||| |||||||||    
T  18500318 taaatacctcttttcgtccctataatattagcgaatttcggttttagtccctgt-aagaaaaagatttagattttgtccctgtaatttcatattcttcca 18500416  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  18500417 cttttggtccctc 18500429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 19284132 - 19284244
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||||||  ||         |||||| ||||||||||||||||||||||||||||||    
T  19284132 taaatacctcttttcgttcatgtaatattagcgaattccagttttagtccacgtaaaataaaagatttagattttgtccctgtaatttcagattcttcca 19284231  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  19284232 cttttggtccctc 19284244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 26385281 - 26385393
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||| ||||||||||||||||||| ||||||||||| |||         |||||| |||||||||||||||||| | |||||||||    
T  26385281 taaatacctcttttcgtctctgtaatattagcgaattctggttttagtccatgtagaaaaaaagatttagattttgtccctgtaattttatattcttcca 26385380  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  26385381 cttttggtccctc 26385393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 24731938 - 24732053
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt---nnnnnnnnngatttaaattttgtccctgtaatttcagattctt 235  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||             | ||| |||||||||||||||||||||||||||    
T  24731938 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaaaaaaattagattttgtccctgtaatttcagattctt 24732037  T
Q  236 ccacttttggtccctc 251  Q
    | ||||||||||||||    
T  24732038 ctacttttggtccctc 24732053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 24732312 - 24732201
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||||||||         |||||| ||||||||| |||||||||| |||||||||    
T  24732312 taaatacctcttttcgtccctgtaatattagcgaattcc-aatttagtccctgtaaaaaaaaagatttagattttgtccatgtaatttcatattcttcca 24732214  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  24732213 cttttggtccctc 24732201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 26385649 - 26385541
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||         |||||| || |||| |||| ||||||| |||||||||    
T  26385649 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaacaaagatttagatgttgttcctgcaatttcatattcttcca 26385550  T
Q  239 cttttggtc 247  Q
    |||||||||    
T  26385549 cttttggtc 26385541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 141 - 246
Target Start/End: Original strand, 9154884 - 9154990
Alignment:
Q  141 aatacctcttttcgtccctgtaata-ttagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccac 239  Q
    ||||||||||||| ||||||||||| ||||||||||||| |||||||||||||         |||||| ||||||||||||||||||||||||||||||     
T  9154884 aatacctcttttcctccctgtaatatttagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttccag 9154983  T
Q  240 ttttggt 246  Q
    |||||||    
T  9154984 ttttggt 9154990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 251
Target Start/End: Original strand, 33714483 - 33714602
Alignment:
Q  136 ggctaaatacctcttttcgtccctgtaatattagcgaattccggttt--tagtccctgt--nnnnnnnnngatttaaattttgtccctgtaatttcagat 231  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||  ||||||||||           |||||| ||||||||| |||||||||| ||    
T  33714483 ggctaaataaatcttttcgtccctgtaatattagcgaattccggttttatagtccctgtaaaaaaaaaaagatttagattttgtccttgtaatttcatat 33714582  T
Q  232 tcttccacttttggtccctc 251  Q
    ||||||||||||||||||||    
T  33714583 tcttccacttttggtccctc 33714602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 140 - 191
Target Start/End: Original strand, 10321737 - 10321788
Alignment:
Q  140 aaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctg 191  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10321737 aaatacttcttttcgtccctgtaatattagcgaattccggttttagtccctg 10321788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 18500704 - 18500655
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 188  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  18500704 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcc 18500655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 30617970 - 30618077
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||| |||||| | ||||||||| |            ||||| |||||||||||||||||||| ||| |||||    
T  30617970 taaatacctcttttcgtccctgtaatattagtgaattctgattttagtcctt-----taaaaaaatttagattttgtccctgtaatttcatattgttcca 30618064  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  30618065 cttttggtccctc 30618077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 2299688 - 2299635
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||| |||||    
T  2299688 taaatatctcttttcgttcctgtaatattagcgaattccggttttagttcctgt 2299635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 148 - 251
Target Start/End: Complemental strand, 9854251 - 9854150
Alignment:
Q  148 cttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtc 247  Q
    ||||| ||||||||||||||||||||||| ||||||||||  |||          ||||| ||||||||| |||||||||| ||||||||||||||||||    
T  9854251 ctttttgtccctgtaatattagcgaattctggttttagtc--tgtaaaaataataatttagattttgtccttgtaatttcatattcttccacttttggtc 9854154  T
Q  248 cctc 251  Q
    ||||    
T  9854153 cctc 9854150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 9481494 - 9481446
Alignment:
Q  202 gatttaaattttgtccctgtaatttcagattcttccacttttggtccct 250  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  9481494 gatttagattttgtccttgtaatttcagattcttccacttttggtccct 9481446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 3230217 - 3230129
Alignment:
Q  159 tgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtc 247  Q
    |||||||||||||||||||| |||||||||||||         |||||| ||||||||| | |||||||| |||||| |||||||||||    
T  3230217 tgtaatattagcgaattccgattttagtccctgtaaaataaaagatttagattttgtccatataatttcatattctttcacttttggtc 3230129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 2299353 - 2299396
Alignment:
Q  149 ttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    ||||||||  ||||||||||||||||||||||||||||||||||    
T  2299353 ttttcgtctatgtaatattagcgaattccggttttagtccctgt 2299396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 205 - 248
Target Start/End: Complemental strand, 10322040 - 10321997
Alignment:
Q  205 ttaaattttgtccctgtaatttcagattcttccacttttggtcc 248  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||    
T  10322040 ttaaattatgtccctgtaatttcagattctttcacttttggtcc 10321997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 149 - 192
Target Start/End: Original strand, 21069527 - 21069570
Alignment:
Q  149 ttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||| ||||||||||||| |||||||||||||||||||||||||    
T  21069527 ttttagtccctgtaatatgagcgaattccggttttagtccctgt 21069570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 139 - 186
Target Start/End: Original strand, 30458903 - 30458950
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagt 186  Q
    ||||||| ||||||||||||||||||||||| ||||| ||||||||||    
T  30458903 taaatacatcttttcgtccctgtaatattagtgaatttcggttttagt 30458950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 2299614 - 2299580
Alignment:
Q  209 attttgtccctgtaatttcagattcttccactttt 243  Q
    |||||||||||||||||||||||||||||||||||    
T  2299614 attttgtccctgtaatttcagattcttccactttt 2299580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 26385474 - 26385437
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||||||||||    
T  26385474 gtccctgtaatttcagattcctccacttttggtccctc 26385437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 33637625 - 33637674
Alignment:
Q  202 gatttaaattttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||| ||||||| | |||||||| ||||||||||||||||||||||||    
T  33637625 gatttagattttgttcttgtaattttagattcttccacttttggtccctc 33637674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Original strand, 34884560 - 34884613
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||| |||||||||||| ||||||||||| ||||| |||||||| |||||||    
T  34884560 taaatatctcttttcgtccttgtaatattagtgaatttcggttttaatccctgt 34884613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 17142744 - 17142788
Alignment:
Q  203 atttaaattttgtccctgtaatttcagattcttccacttttggtc 247  Q
    ||||| ||| |||||||||||||||| ||||||||||||||||||    
T  17142744 atttagattatgtccctgtaatttcaaattcttccacttttggtc 17142788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 17142834 - 17142798
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccct 250  Q
    |||||||||||||||||||| ||||||||||||||||    
T  17142834 gtccctgtaatttcagattcctccacttttggtccct 17142798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 243
Target Start/End: Complemental strand, 30618272 - 30618232
Alignment:
Q  203 atttaaattttgtccctgtaatttcagattcttccactttt 243  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  30618272 atttagattttgtccctgtaattttagattcttccactttt 30618232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 21070910 - 21070859
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||| ||||| ||||||||||||| ||||||||||||| |||||| ||||    
T  21070910 aataccccttttagtccctgtaatatgagcgaattccggtattagtctctgt 21070859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 34113630 - 34113591
Alignment:
Q  149 ttttcgtccctgtaatattagcgaattccggttttagtcc 188  Q
    |||| |||||||||||||||||||||| ||||||||||||    
T  34113630 ttttggtccctgtaatattagcgaatttcggttttagtcc 34113591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 184
Target Start/End: Complemental strand, 30459267 - 30459229
Alignment:
Q  146 ctcttttcgtccctgtaatattagcgaattccggtttta 184  Q
    |||||||||| ||||||||||||||||||| ||||||||    
T  30459267 ctcttttcgttcctgtaatattagcgaatttcggtttta 30459229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 14680949 - 14680994
Alignment:
Q  203 atttaaattttgtccctgtaatttcagattcttccacttttggtcc 248  Q
    ||||| ||||||||  |||||||||| |||||||||||||||||||    
T  14680949 atttagattttgtctttgtaatttcatattcttccacttttggtcc 14680994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 250
Target Start/End: Complemental strand, 18500583 - 18500538
Alignment:
Q  206 taaattttgtccctgtaatttcagattc-ttccacttttggtccct 250  Q
    |||||| ||||||||||||||||||| | |||||||||||||||||    
T  18500583 taaattatgtccctgtaatttcagatcctttccacttttggtccct 18500538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 24732120 - 24732157
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  24732120 gtccctataatttcagattcctccacttttggtccctc 24732157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 219 - 248
Target Start/End: Original strand, 32017619 - 32017648
Alignment:
Q  219 tgtaatttcagattcttccacttttggtcc 248  Q
    ||||||||||||||||||||||||||||||    
T  32017619 tgtaatttcagattcttccacttttggtcc 32017648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 218 - 251
Target Start/End: Complemental strand, 33714679 - 33714646
Alignment:
Q  218 ctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||| |||||||||||||||||    
T  33714679 ctgtaatttcagattcctccacttttggtccctc 33714646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 32017731 - 32017695
Alignment:
Q  215 tccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||| |||| |||||||||||||||||    
T  32017731 tccctgtaatttcaaattcctccacttttggtccctc 32017695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 211 - 251
Target Start/End: Complemental strand, 33637831 - 33637791
Alignment:
Q  211 tttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||| |||||| |||||||| ||||||    
T  33637831 tttgtccctgtaatttcatattctttcacttttgatccctc 33637791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 187
Target Start/End: Complemental strand, 33637892 - 33637844
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtc 187  Q
    ||||||||||||||| ||  |||||||||| |||||| |||||||||||    
T  33637892 taaatacctcttttcatctttgtaatattaccgaatttcggttttagtc 33637844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 17850961 - 17850849
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||         | |||| ||||||||||||||||||||||||||||||    
T  17850961 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtcactgtaaataaaatgctttagattttgtccctgtaatttcagattcttcca 17850862  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  17850861 cttttggtccctc 17850849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 23806327 - 23806215
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||         |||||| |||||||||||||||||||| |||||||||    
T  23806327 taaatacctctttttgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 23806228  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  23806227 cttttggtccctc 23806215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 141 - 251
Target Start/End: Original strand, 19251476 - 19251585
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||         |||||| |||||||||||||||||||| |||||||||||    
T  19251476 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgt-aaaaaaaagatttagattttgtccctgtaatttcatattcttccact 19251574  T
Q  241 tttggtccctc 251  Q
    |||||||||||    
T  19251575 tttggtccctc 19251585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 17463466 - 17463354
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||         |||||| ||||||||||||||||| || |||||||||    
T  17463466 taaatacctcttttcgcccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaattgcatattcttcca 17463367  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  17463366 cttttgatccctc 17463354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 141 - 245
Target Start/End: Original strand, 23854693 - 23854797
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||         |||||| |||||||||||||||||||| |||||||||||    
T  23854693 aatacctcttttcgtccctgtaatattagcgaatttcggttttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttccact 23854792  T
Q  241 tttgg 245  Q
    |||||    
T  23854793 tttgg 23854797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 26135828 - 26135932
Alignment:
Q  147 tcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggt 246  Q
    |||||||||||||||||||||||||||||||| |||||||||||||         |||||| |||||||||||||||||||||||||||| |||||||||    
T  26135828 tcttttcgtccctgtaatattagcgaattccgattttagtccctgtaaaaaaaaagatttagattttgtccctgtaatttcagattcttctacttttggt 26135927  T
Q  247 ccctc 251  Q
    |||||    
T  26135928 ccctc 26135932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 26236130 - 26236242
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| |||||||||||| |||||||||||||||||| |||||||||||||||         |||||| ||||||||||||||||||||||||||| ||    
T  26236130 taaatatctcttttcgtccttgtaatattagcgaattctggttttagtccctgtataaaaaaagatttatattttgtccctgtaatttcagattctttca 26236229  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  26236230 cttttggtccctc 26236242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 26236474 - 26236358
Alignment:
Q  134 gaggctaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattc 233  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||          |||||| |||||||||||||||||||||||||    
T  26236474 gagggtaaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccttg-gaaaaaaaagatttagattttgtccctgtaatttcagattc 26236376  T
Q  234 ttccacttttggtccctc 251  Q
    ||||| ||||||||||||    
T  26236375 ttccatttttggtccctc 26236358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 15106070 - 15106182
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| ||||||||||||| |||||||||||||||| |||||||| |||||||         |||||| |||||||||||||||||| ||||| |||||    
T  15106070 taaatatctcttttcgtccccgtaatattagcgaatttcggttttaatccctgtaaataaaaagatttagattttgtccctgtaattttagattattcca 15106169  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  15106170 cttttggtccctc 15106182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 15106440 - 15106330
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||| |||||||||||||||| || |||||||||||||          ||||| ||||||||||||||||||||||||||||||    
T  15106440 taaatacctcttttcgtccccgtaatattagcgaatttcgattttagtccctgtaaaaaaaa--atttagattttgtccctgtaatttcagattcttcca 15106343  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  15106342 cttttgatccctc 15106330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 17850590 - 17850701
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||| |         |||||| |||||||| ||||||||| |||||||||||    
T  17850590 taaatacctcttttcgtccctgtaatattagcgaattccgattttagtccctat-aaaaaaaagatttagattttgtctctgtaatttaagattcttcca 17850688  T
Q  239 cttttggtccctc 251  Q
    |||||| ||||||    
T  17850689 cttttgatccctc 17850701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 22263568 - 22263454
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt--nnnnnnnnngatttaaattttgtccctgtaatttcagattcttc 236  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||           |||| | |||||||||||||||||||| |||||||    
T  22263568 taaatacctcttttcgttcctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaaagattcagattttgtccctgtaatttcatattcttc 22263469  T
Q  237 cacttttggtccctc 251  Q
    |||||||||||||||    
T  22263468 cacttttggtccctc 22263454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 13254811 - 13254699
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||||          |||||||||||  | |||||||||||||||||||||    
T  13254811 taaatatctcttttcgtccctgtaatattagcgaattccggttttagtctctgtaaaaaaaaaagatttaaatttaat-cctgtaatttcagattcttcc 13254713  T
Q  238 acttttggtccctc 251  Q
    ||||||||||||||    
T  13254712 acttttggtccctc 13254699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 26560561 - 26560668
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||| ||||||||||||||||||||||| |||||| || |||||||||||||         |||||| |||| |||||||||||||||||||||||||||    
T  26560561 aatatctcttttcgtccctgtaatattaacgaatttcgattttagtccctgtaaaaaaa--gatttagatttagtccctgtaatttcagattcttccact 26560658  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  26560659 tttggtccct 26560668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 42671094 - 42670982
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||| ||||||||| |||||||||||| | ||||||||||||||         |||||| ||| |||||||||||||||| ||| |||||    
T  42671094 taaatacctctttttgtccctgtagtattagcgaatttcagttttagtccctgtaaaaaaaaggatttagattatgtccctgtaatttcatatttttcca 42670995  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  42670994 cttttggtccctc 42670982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 19251844 - 19251733
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||         |||||| ||| ||||| |||||||||| |||||||||    
T  19251844 taaatacctcttttcgtccttgtaatattagtgaattccggttttagtccctgt-aaaaaaaagatttagattctgtccttgtaatttcatattcttcca 19251746  T
Q  239 cttttggtccctc 251  Q
    |||| ||||||||    
T  19251745 ctttcggtccctc 19251733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 140 - 251
Target Start/End: Original strand, 30390463 - 30390574
Alignment:
Q  140 aaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccac 239  Q
    ||||| |||||||||||| |||||||||||||||||||| ||||| |||||||          | ||| |||||||||||||||||||| ||||||||||    
T  30390463 aaatatctcttttcgtccatgtaatattagcgaattccgattttaatccctgtaaaaaaaaaaaattagattttgtccctgtaatttcatattcttccac 30390562  T
Q  240 ttttggtccctc 251  Q
    ||||||||||||    
T  30390563 ttttggtccctc 30390574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 13254500 - 13254612
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||| ||| |||||||||||||||||||  ||||||| |||||||         |||||| ||||||||| ||||||||||||||||| ||    
T  13254500 taaatacctctttccgttcctgtaatattagcgaattttggttttactccctgtaaaataaaagatttagattttgtccttgtaatttcagattctttca 13254599  T
Q  239 cttttggtccctc 251  Q
    |||||||| ||||    
T  13254600 cttttggttcctc 13254612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 20498750 - 20498860
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||||||||          ||||| ||| ||||||||| ||||||||||||||||    
T  20498750 taaatacctcttttcgtctatgtaatattagcgaattacggttttagtccctgtaaaaaaaat-atttagattatgtccctgt-atttcagattcttcca 20498847  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  20498848 cttttggtccctc 20498860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 42670722 - 42670833
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt--nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||            | ||| ||||||||| |||||||||| |||||||||    
T  42670722 aatacctcttttcgtccctgtaatagtagcgaattccggttttagtccctgtaaaaaaaaaaaaaattagattttgtccttgtaatttcatattcttcca 42670821  T
Q  239 cttttggtccct 250  Q
    ||||||||||||    
T  42670822 cttttggtccct 42670833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 39878100 - 39878213
Alignment:
Q  133 agaggctaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagatt 232  Q
    ||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||          ||||| ||| |||  |||||||||||||||    
T  39878100 agagggtaaatacctttttt-gtccttgtaatattagcgaattccggttttagtccctgtaaaaaaagatatttagattatgtatctgtaatttcagatt 39878198  T
Q  233 cttccacttttggtc 247  Q
    |||||||||||||||    
T  39878199 cttccacttttggtc 39878213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 248
Target Start/End: Complemental strand, 20499120 - 20499011
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||| ||||| || ||| ||||||| | |||||||||||||||| ||||         |||||| ||||||||||||||||||||||||||| ||    
T  20499120 taaatacctattttcatctctgaaatattaacaaattccggttttagtcactgtaaaaaaaaagatttagattttgtccctgtaatttcagattctttca 20499021  T
Q  239 cttttggtcc 248  Q
    ||||||||||    
T  20499020 cttttggtcc 20499011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 147 - 251
Target Start/End: Original strand, 17463103 - 17463206
Alignment:
Q  147 tcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggt 246  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||          | ||| ||||||||||||||||||||| |||| |||||||||||    
T  17463103 tcttttcgtccctataatattagcgaattccggttttagtcgctgtaaaaaaaaa-aattagattttgtccctgtaatttcaggttctcccacttttggt 17463201  T
Q  247 ccctc 251  Q
    |||||    
T  17463202 ccctc 17463206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 22263197 - 22263305
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    ||||| ||||||| ||||||||||||||| |||||| |||||||||| || |         |||||| |||||||||||||||||||| |||||||||||    
T  22263197 aatacatcttttcatccctgtaatattagagaattctggttttagtctctatgaaaaaaa-gatttagattttgtccctgtaatttcatattcttccact 22263295  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  22263296 tttggtccct 22263305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 242
Target Start/End: Original strand, 23046710 - 23046813
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||| |||||||| |||||||||||||||| ||| || |          ||||| ||| ||||||||||||||||||||||||||    
T  23046710 taaatacctcttttcgtccttgtaatatgagcgaattccggttttggtctctataaaaaaaataatttagattctgtccctgtaatttcagattcttcca 23046809  T
Q  239 cttt 242  Q
    ||||    
T  23046810 cttt 23046813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 23855069 - 23855025
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggtttt 183  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  23855069 taaatacctcttttcgtccctgtaatattagcgaattccggtttt 23855025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 139 - 242
Target Start/End: Complemental strand, 44098997 - 44098894
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||| || |||||          ||||| ||| ||||||||||||||||||||||||||    
T  44098997 taaatatctcttttcgtccctgtaatatgagcgaattctggttttggttcctgtaaaaaaaataatttagattatgtccctgtaatttcagattcttcca 44098898  T
Q  239 cttt 242  Q
    ||||    
T  44098897 cttt 44098894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 26560930 - 26560880
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccc 189  Q
    ||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  26560930 taaatacctcttttcgtccttgtaatattagcgaattccgattttagtccc 26560880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 12419095 - 12419046
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccct 190  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  12419095 aataccacttttggtccctgtaatattagcgaattccggttttagtccct 12419046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 141 - 190
Target Start/End: Complemental strand, 12431155 - 12431106
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccct 190  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  12431155 aataccacttttggtccctgtaatattagcgaattccggttttagtccct 12431106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 34548577 - 34548684
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||| ||||||||||||||||||||||| |||||  |||||||||||||||         |||||| ||||||||| |||||||||| ||| |||||    
T  34548577 taaatacttcttttcgtccctgtaatattagtgaattttggttttagtccctgt-aaaaaaaagatttagattttgtccatgtaatttcatattgttcca 34548675  T
Q  239 cttttggtc 247  Q
    | |||||||    
T  34548676 cctttggtc 34548684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 192
Target Start/End: Original strand, 30958689 - 30958740
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||| ||||| |||||||||||||||||||||| ||||||||||||||||    
T  30958689 aataccacttttggtccctgtaatattagcgaatttcggttttagtccctgt 30958740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 141 - 188
Target Start/End: Complemental strand, 30960044 - 30959997
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 188  Q
    |||||| ||||| |||||||||||||||||||||||||||||||||||    
T  30960044 aataccacttttggtccctgtaatattagcgaattccggttttagtcc 30959997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 250
Target Start/End: Original strand, 33290062 - 33290163
Alignment:
Q  149 ttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtcc 248  Q
    |||| |||||||||||||||||||||||| ||||||||||||||          ||||| ||| ||||| |||||||||| | || ||||||||||||||    
T  33290062 ttttggtccctgtaatattagcgaattccagttttagtccctgtaaaataaaaaatttagattctgtccttgtaatttcatactcctccacttttggtcc 33290161  T
Q  249 ct 250  Q
    ||    
T  33290162 ct 33290163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 141 - 250
Target Start/End: Complemental strand, 33290420 - 33290313
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccact 240  Q
    |||||| ||||| ||||||||||||||||||||||| ||||||| |||||||          | ||| |||||| || |||||||||| |||||||||||    
T  33290420 aataccgcttttggtccctgtaatattagcgaattctggttttaatccctgtaaaaaaaa--aattagattttgaccttgtaatttcatattcttccact 33290323  T
Q  241 tttggtccct 250  Q
    ||||||||||    
T  33290322 tttggtccct 33290313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 23047957 - 23047904
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||  |||||||    
T  23047957 taaatacctattttcgtccctgtaatatgagcgaattccggttttgctccctgt 23047904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 188
Target Start/End: Complemental strand, 26136192 - 26136143
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 188  Q
    ||||||||||||||||||| |||||||||| |||||| ||||||||||||    
T  26136192 taaatacctcttttcgtccttgtaatattaacgaatttcggttttagtcc 26136143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 148 - 192
Target Start/End: Complemental strand, 13284779 - 13284735
Alignment:
Q  148 cttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||    
T  13284779 cttttggtccctgtaatattagcgaatttcggttttagtccctgt 13284735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 251
Target Start/End: Complemental strand, 13284713 - 13284671
Alignment:
Q  209 attttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||| ||||||||||||||| |||||||||||||||||    
T  13284713 attttgtccttgtaatttcagattcctccacttttggtccctc 13284671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 158 - 251
Target Start/End: Complemental strand, 21482235 - 21482143
Alignment:
Q  158 ctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||| |||         | |||| ||||||||||||| |||| |||||||||||||||| |||||||    
T  21482235 ctgtaatattagcgaattccagttttagtccttgtaaaaaaatag-tttagattttgtccctgtcattttagattcttccacttttagtccctc 21482143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 209 - 251
Target Start/End: Original strand, 23806025 - 23806067
Alignment:
Q  209 attttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||| ||||||||||| ||||||||||||||||||||||||    
T  23806025 attttgcccctgtaattttagattcttccacttttggtccctc 23806067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 39878447 - 39878395
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||| ||||||||    
T  39878447 taaatacctctttttgtcc-tgtaatattagcgaattccagttttcgtccctgt 39878395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 141 - 185
Target Start/End: Original strand, 13284417 - 13284461
Alignment:
Q  141 aatacctcttttcgtccctgtaatattagcgaattccggttttag 185  Q
    |||||| ||||| ||||||||||||| ||||||||||||||||||    
T  13284417 aataccactttttgtccctgtaatatcagcgaattccggttttag 13284461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 23854977 - 23854929
Alignment:
Q  203 atttaaattttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||| |||||||| ||||||||| | ||||||||||||||||||||||    
T  23854977 atttagattttgtctctgtaattttatattcttccacttttggtccctc 23854929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 212 - 251
Target Start/End: Original strand, 13284484 - 13284523
Alignment:
Q  212 ttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||||||| |||||||||||||| |||||||    
T  13284484 ttgtccctgtaatttcatattcttccacttttagtccctc 13284523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 15106249 - 15106286
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||| ||||||    
T  15106249 gtccctgtaatttcagattcctccacttttgatccctc 15106286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 22263387 - 22263350
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  22263387 gtccctgtaatttcaaattcctccacttttggtccctc 22263350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 23806134 - 23806171
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  23806134 gtccctataatttcagattcctccacttttggtccctc 23806171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 26236277 - 26236314
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||||| |||| |||||||||||||||||    
T  26236277 gtccctgtaatttcatattcctccacttttggtccctc 26236314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 30390663 - 30390618
Alignment:
Q  206 taaattttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||| ||||||||||||||||||||| | || ||||||||||||    
T  30390663 taaattatgtccctgtaatttcagattccttcatttttggtccctc 30390618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 33290231 - 33290268
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||| | |||||||||||||||||    
T  33290231 gtccctgtaatttcagatacctccacttttggtccctc 33290268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 39878402 - 39878365
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    ||||||||||||||||||| || |||||||||||||||    
T  39878402 gtccctgtaatttcagattttttcacttttggtccctc 39878365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 23854861 - 23854825
Alignment:
Q  215 tccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||| |||| |||||||||||||||||    
T  23854861 tccctgtaatttcaaattcctccacttttggtccctc 23854825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0449
Description:

Target: scaffold0449; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 7575 - 7466
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||          |||||| ||||||||||||||||||||||||||||     
T  7575 taaatacctattttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaaagatttagattttgtccctgtaatttcagattcttct 7476  T
Q  238 acttttggtc 247  Q
    ||||||||||    
T  7475 acttttggtc 7466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0449; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 7229 - 7341
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||| |||||||||||||||||| ||| ||||| |||||         |||||| |||||||||||||||||||| |||||||||    
T  7229 taaatacctcttttcgtccttgtaatattagcgaattctggtgttagttcctgtaaaaaaaaagatttagattttgtccctgtaatttcatattcttcca 7328  T
Q  239 cttttggtccctc 251  Q
    |||| ||||||||    
T  7329 ctttcggtccctc 7341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 4565 - 4678
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt-nnnnnnnnngatttaaattttgtccctgtaatttcagattcttcc 237  Q
    ||||||||||||||||||| |||||||||||||||||||| |||||||||||||          ||||||||||||||||||||||||| |||||||||     
T  4565 taaatacctcttttcgtccttgtaatattagcgaattccgattttagtccctgtaaaaaaaaaagatttaaattttgtccctgtaatttgagattcttct 4664  T
Q  238 acttttggtccctc 251  Q
    ||||||||||||||    
T  4665 acttttggtccctc 4678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 4937 - 4826
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||||||         |||||| ||||||||| |||||||||| |||||||||    
T  4937 taaatacctcttttcgtccctgtaatattagcaaattccggttttaatccctgt-aaaaataagatttagattttgtccttgtaatttcatattcttcca 4839  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  4838 cttttggtccctc 4826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 214 - 251
Target Start/End: Original strand, 4745 - 4782
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| |||||||||||||||||    
T  4745 gtccctgtaatttcagattcctccacttttggtccctc 4782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 3872 - 3980
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||         |||||| ||| |||||||||||||||| |||||||||    
T  3872 taaatatctcttttcgtccctgtaatattagcgaattccggttttagtccctgtaaaaaaaaagatttagattatgtccctgtaatttcaaattcttcca 3971  T
Q  239 cttttggtc 247  Q
    || ||||||    
T  3972 ctgttggtc 3980  T

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Target: scaffold0141 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 8697 - 8585
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||  ||||| || |||| ||||||||||||||||||||||||||||| |         |||||| |||||||||||||||||| |||||||||||    
T  8697 taaatactgctttttgttcctgcaatattagcgaattccggttttagtccctttaaaaaaaaagatttagattttgtccctgtaattttagattcttcca 8598  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  8597 cttttggtccctc 8585  T

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Target: scaffold0141; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 8328 - 8434
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||         |||||| |||||||||| ||||  |||||||||| ||    
T  8328 taaatacctcttttcgtccctgtaatattagcgaatttcggttttagtccccgtaaataaaaagatttagattttgtcccagtaa--tcagattctttca 8425  T
Q  239 cttttggtc 247  Q
    |||||||||    
T  8426 cttttggtc 8434  T

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Target: scaffold0809 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 139 - 251
Target Start/End: Original strand, 1414 - 1525
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||||| ||| |||||||| ||||||| || |||||||||||||         |||||| ||| ||||||||||||||||||||||||||    
T  1414 taaatacctcttttcgacccggtaatatttgcgaatttcgattttagtccctgtaaaaaaaa-gatttagattatgtccctgtaatttcagattcttcca 1512  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  1513 cttttggtccctc 1525  T

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Target: scaffold0809; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 134 - 251
Target Start/End: Complemental strand, 1786 - 1673
Alignment:
Q  134 gaggctaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattc 233  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||| |          | ||| ||| ||||| |||||||||||||||    
T  1786 gagggtaaatccctcttttcgtccctgtaatattaacgaattccggttttagtccctataaaaaa----aattagattatgtccttgtaatttcagattc 1691  T
Q  234 ttccacttttggtccctc 251  Q
    ||||||||||||||||||    
T  1690 ttccacttttggtccctc 1673  T

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Target: scaffold0352 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 139 - 250
Target Start/End: Original strand, 4670 - 4781
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||||||||| ||||||| |||||||||||||||| |||||||||||| |           |||| ||| ||||||||||||||||||||| ||||    
T  4670 taaatacctcttttagtccctgcaatattagcgaattccagttttagtccctataaaaaaaaaagtttagattctgtccctgtaatttcagattcctcca 4769  T
Q  239 cttttggtccct 250  Q
    ||||||||||||    
T  4770 cttttggtccct 4781  T

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Target: scaffold0352; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 6054 - 5941
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnnga-tttaaattttgtccctgtaatttcagattcttcc 237  Q
    |||||||||||||| ||||||| ||||||||||||||||| |||||||||||||          | |||| ||| ||||||||||||||||||||| |||    
T  6054 taaatacctcttttggtccctgcaatattagcgaattccgattttagtccctgtaaaaaaaaaaagtttagattctgtccctgtaatttcagattcctcc 5955  T
Q  238 acttttggtccctc 251  Q
    ||||||| ||||||    
T  5954 acttttgatccctc 5941  T

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Target: scaffold0477 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0477
Description:

Target: scaffold0477; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 251
Target Start/End: Complemental strand, 5121 - 5011
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatttcagattcttcca 238  Q
    |||||||| |||||||||| ||||||||||||||||||||||||| ||||  ||          ||||| |||| ||||||||||||| |||||||||||    
T  5121 taaatacc-cttttcgtccatgtaatattagcgaattccggtttttgtcctagtaaaaaaaat-atttagatttagtccctgtaattttagattcttcca 5024  T
Q  239 cttttggtccctc 251  Q
    |||||||||||||    
T  5023 cttttggtccctc 5011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0477; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 139 - 188
Target Start/End: Original strand, 4883 - 4932
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtcc 188  Q
    |||||||||||||| || ||||||||||||||||||| ||||||||||||    
T  4883 taaatacctctttttgttcctgtaatattagcgaatttcggttttagtcc 4932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 139 - 192
Target Start/End: Complemental strand, 16003 - 15950
Alignment:
Q  139 taaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgt 192  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||||| ||||    
T  16003 taaatatctcttttcgtccatgtaatattagcgaattccggttttagtctctgt 15950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 247
Target Start/End: Complemental strand, 15937 - 15899
Alignment:
Q  209 attttgtccctgtaatttcagattcttccacttttggtc 247  Q
    |||||||||||||||||||| |||||| |||||||||||    
T  15937 attttgtccctgtaatttcatattctttcacttttggtc 15899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881 (Bit Score: 35; Significance: 0.00000000009; HSPs: 4)
Name: scaffold0881
Description:

Target: scaffold0881; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 246
Target Start/End: Complemental strand, 605 - 487
Alignment:
Q  126 atttataagaggctaaatacctcttttcgtccctgtaatattagcgaattccggttttagtccctgtnnnnnnnnngatttaaattttgtccctgtaatt 225  Q
    |||| ||| ||| ||||||||||||||  || ||| ||||||| ||||||||||||||| |||||||         |||||| ||||||| |  ||||||    
T  605 atttgtaaaagggtaaatacctctttttatctctggaatattaacgaattccggttttactccctgtaaaataaaagatttagattttgttc--gtaatt 508  T
Q  226 tcagattcttccacttttggt 246  Q
    ||||||| |||||||||||||    
T  507 tcagattattccacttttggt 487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 286 - 335
Alignment:
Q  202 gatttaaattttgtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||| ||||| ||||  |||||||||||||||||||||||||||||||    
T  286 gatttagattttctccccataatttcagattcttccacttttggtccctc 335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 416 - 379
Alignment:
Q  214 gtccctgtaatttcagattcttccacttttggtccctc 251  Q
    |||||||||||||||||||| || ||||||||||||||    
T  416 gtccctgtaatttcagattcctctacttttggtccctc 379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0881; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 146 - 186
Target Start/End: Original strand, 229 - 269
Alignment:
Q  146 ctcttttcgtccctgtaatattagcgaattccggttttagt 186  Q
    ||||||| |||||||||| |||||||||||| |||||||||    
T  229 ctctttttgtccctgtaaaattagcgaattctggttttagt 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 142 - 190
Target Start/End: Complemental strand, 274 - 226
Alignment:
Q  142 atacctcttttcgtccctgtaatattagcgaattccggttttagtccct 190  Q
    ||||| ||||| |||||| ||||||||||||||||| ||||||||||||    
T  274 ataccacttttagtccctataatattagcgaattccagttttagtccct 226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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