View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2058_high_12 (Length: 423)
Name: NF2058_high_12
Description: NF2058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2058_high_12 |
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Alignment Details
Target: chr4 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 11 - 261
Target Start/End: Original strand, 1582867 - 1583117
Alignment:
| Q |
11 |
caaaggtcctcctccgtagcattaggtaaatttgtttctttctctattttccaataaaacacaacaaaactagtttaataagaggagtgtagtaaataaa |
110 |
Q |
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| T |
1582867 |
caaaggtcctcctccgtagcattaggtaaatttgtttctttctctattttccaataaaacacaacaaaactagtttaataagaggagtgtagtaaataaa |
1582966 |
T |
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| Q |
111 |
taaatagagtaagtttaggataaattatgaagtgcagttatggagaaaggaatatgaaaagaacaatgaacatataaatttcattatttatcttagaatt |
210 |
Q |
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| T |
1582967 |
taaatagagtaagtttaggataaattatgaagtgcagttatggagaaaggaatatgaaaagaacaatgaacatataaatttcataatttatcttagaatt |
1583066 |
T |
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| Q |
211 |
tgggtttggccaattcatcctcacaaaaccaaaaccagactctttatcaac |
261 |
Q |
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| T |
1583067 |
tgggtttggccaattcatcctcacaaaaccaaaaccagactctttatcaac |
1583117 |
T |
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