View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2058_high_26 (Length: 343)
Name: NF2058_high_26
Description: NF2058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2058_high_26 |
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Alignment Details
Target: chr2 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 10 - 328
Target Start/End: Original strand, 1887094 - 1887413
Alignment:
| Q |
10 |
atatgaaagattttgttaattttttgataatgtgaatatgaatgatttgtaggccttcaaattaataagatactag-gatgatgagcttccagaagctgt |
108 |
Q |
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| T |
1887094 |
atatgaaagattttgttaattttttgataatgtgaatatgaatgatttgtaggccttcaaattaataagatactagtgatgatgagcttccagaagctgt |
1887193 |
T |
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| Q |
109 |
cactgcagtgtttatggtcatctcaatgtcaaatgcttaataattgcaagttgtgtttgctaaggagacgacatgaacttaatttttggtattgtttatt |
208 |
Q |
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| T |
1887194 |
cactgcagtgtttatggtcatctcaatgtcaaatgcttaataattgcaagttgtgtttgctaaggagacgacatgaacttaatttttggtattgtttatt |
1887293 |
T |
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| Q |
209 |
cttaattcaatttctccaaaaattaccaaaacaaagttcgaatatatgccgtgaatgaaagttggttcagttgataagaagttagtttatatttcgcnnn |
308 |
Q |
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| T |
1887294 |
cttaattcaatttctccaaaaattaccaaaacaaagttcgaatatatgccgtgaatgaaagttggttcagatgataagaagttagtttatattccgcaaa |
1887393 |
T |
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| Q |
309 |
nnnntagatttaacttgtat |
328 |
Q |
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| T |
1887394 |
aaaatagatttaacttgtat |
1887413 |
T |
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