View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2058_high_45 (Length: 238)
Name: NF2058_high_45
Description: NF2058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2058_high_45 |
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Alignment Details
Target: chr5 (Bit Score: 211; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 38802423 - 38802645
Alignment:
| Q |
1 |
atgtcgtctgaaagtagaccttggaacaaattatgccgtcataatcatactttcgaaaccatgtgtgattttttaatagatgtggggtcgataaagttgc |
100 |
Q |
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| T |
38802423 |
atgtcgtctgaaagtagaccttggaacaaattatgccgtcataatcatactttcgaaaccatgtgtgattttttaatagacgtggggtcgataaagttgc |
38802522 |
T |
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| Q |
101 |
tccttttctttctatacattttattacataggtttaggcttaccattccctgcttttgatccatggaggaatgaagaggtgagggacctaagaacaagaa |
200 |
Q |
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||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38802523 |
tccttgtctttttatacattttattacataggtttaggcttaccattccctgcttttgatccatggaggaatgaagaggtgagggacctaagaacaagaa |
38802622 |
T |
|
| Q |
201 |
gctatacaaattaaggtgttatt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
38802623 |
gctatacaaattaaggtgttatt |
38802645 |
T |
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