View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2058_low_41 (Length: 268)
Name: NF2058_low_41
Description: NF2058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2058_low_41 |
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Alignment Details
Target: chr1 (Bit Score: 247; Significance: 1e-137; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 247; E-Value: 1e-137
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 38292992 - 38293246
Alignment:
| Q |
1 |
agaaaataattaatatatgtactgatcaatgcagaaccaaatgaatttagagtaagagaggttaattaatatactgagtgccgggaatgaaaacgtcaga |
100 |
Q |
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| T |
38292992 |
agaaaataattaatatatgtactgatcaatgcagaaccaaatgaatttagagtaagagaggttaattaatatactgagtgccaggaatgaaaacgtcgga |
38293091 |
T |
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| Q |
101 |
atttgaagctacgcagtgcttatgaagctgtgtttgtgcatcaaaagcttctcttccatgaacaaagctggtaccaaaggcagtgtgggcaattatattt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38293092 |
atttgaagctacgcagtgcttatgaagctgtgtttgtgcatcaaaagcttctcttccatgaacaaagctggtaccaaaggcagtgtgggcaattatattt |
38293191 |
T |
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| Q |
201 |
gctgttagctctcgaaattcttcagtcatctctattttctttgatttctcctttg |
255 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38293192 |
gctgttagctctcgaaattcttcagtcatctctattttctttgatttctcctttg |
38293246 |
T |
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