View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20593_low_28 (Length: 244)

Name: NF20593_low_28
Description: NF20593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20593_low_28
NF20593_low_28
[»] chr6 (45 HSPs)
chr6 (6-156)||(8522455-8522607)
chr6 (4-152)||(15686455-15686604)
chr6 (4-152)||(16101971-16102121)
chr6 (19-131)||(23352131-23352243)
chr6 (1-131)||(13763958-13764088)
chr6 (16-148)||(16829470-16829603)
chr6 (16-148)||(29492427-29492560)
chr6 (17-148)||(16812450-16812582)
chr6 (12-130)||(24440865-24440982)
chr6 (16-131)||(15538831-15538948)
chr6 (12-130)||(15538952-15539072)
chr6 (12-131)||(29848495-29848614)
chr6 (18-152)||(221613-221747)
chr6 (4-152)||(12595586-12595735)
chr6 (1-131)||(2288262-2288394)
chr6 (28-148)||(16804631-16804752)
chr6 (6-130)||(13764310-13764434)
chr6 (12-131)||(8522599-8522717)
chr6 (1-130)||(23621264-23621394)
chr6 (6-130)||(13764076-13764200)
chr6 (6-130)||(13764154-13764278)
chr6 (6-118)||(13764244-13764356)
chr6 (5-116)||(8522575-8522686)
chr6 (16-130)||(16102033-16102148)
chr6 (12-130)||(13764388-13764506)
chr6 (61-131)||(24266675-24266746)
chr6 (1-78)||(29492458-29492536)
chr6 (12-78)||(2288234-2288301)
chr6 (12-130)||(15686424-15686542)
chr6 (1-78)||(23352145-23352222)
chr6 (1-70)||(29848523-29848592)
chr6 (16-73)||(12389543-12389602)
chr6 (1-71)||(16829508-16829579)
chr6 (18-73)||(21469786-21469840)
chr6 (1-130)||(23621225-23621354)
chr6 (1-78)||(12595621-12595699)
chr6 (16-110)||(25806902-25807000)
chr6 (3-73)||(9185963-9186035)
chr6 (3-110)||(12389463-12389575)
chr6 (16-130)||(12595648-12595762)
chr6 (43-130)||(15538872-15538960)
chr6 (4-71)||(16812488-16812556)
chr6 (16-78)||(23621201-23621263)
chr6 (2-71)||(24266697-24266766)
chr6 (4-40)||(16804701-16804737)
[»] chr5 (65 HSPs)
chr5 (6-156)||(26495409-26495561)
chr5 (5-155)||(43120765-43120915)
chr5 (5-155)||(43124298-43124448)
chr5 (6-151)||(29325666-29325813)
chr5 (1-156)||(22759104-22759260)
chr5 (16-150)||(24277647-24277782)
chr5 (16-150)||(24384431-24384566)
chr5 (16-152)||(16256365-16256501)
chr5 (16-152)||(16259959-16260095)
chr5 (12-130)||(8953030-8953148)
chr5 (16-152)||(22593678-22593814)
chr5 (16-152)||(22597233-22597369)
chr5 (3-131)||(22469776-22469905)
chr5 (16-152)||(22590123-22590259)
chr5 (12-131)||(22357907-22358027)
chr5 (5-156)||(23671454-23671605)
chr5 (16-131)||(27869811-27869926)
chr5 (15-152)||(26361435-26361574)
chr5 (1-117)||(43120842-43120957)
chr5 (1-117)||(43124375-43124490)
chr5 (6-130)||(22759070-22759194)
chr5 (6-131)||(16256276-16256402)
chr5 (5-132)||(23693107-23693234)
chr5 (53-152)||(4397416-4397516)
chr5 (16-142)||(22357990-22358118)
chr5 (15-131)||(26495553-26495668)
chr5 (12-131)||(16259877-16259996)
chr5 (12-131)||(22590041-22590160)
chr5 (12-131)||(22593596-22593715)
chr5 (12-131)||(22597151-22597270)
chr5 (5-116)||(26495529-26495640)
chr5 (3-130)||(27869721-27869847)
chr5 (12-131)||(29325556-29325674)
chr5 (5-90)||(29325587-29325673)
chr5 (18-130)||(22759004-22759116)
chr5 (3-78)||(16256312-16256388)
chr5 (5-131)||(23671518-23671644)
chr5 (16-78)||(27869696-27869757)
chr5 (6-78)||(16259909-16259982)
chr5 (6-78)||(22590073-22590146)
chr5 (6-78)||(22593628-22593701)
chr5 (6-78)||(22597183-22597256)
chr5 (1-78)||(16256389-16256466)
chr5 (1-78)||(16259983-16260060)
chr5 (1-78)||(22469868-22469947)
chr5 (16-130)||(43120869-43120981)
chr5 (16-130)||(43124402-43124514)
chr5 (1-78)||(22593702-22593779)
chr5 (1-78)||(22597257-22597334)
chr5 (1-131)||(22759026-22759156)
chr5 (12-130)||(23693148-23693266)
chr5 (1-78)||(22469790-22469867)
chr5 (1-78)||(22590147-22590224)
chr5 (15-78)||(16256247-16256309)
chr5 (19-127)||(26361399-26361509)
chr5 (16-130)||(24277606-24277722)
chr5 (16-130)||(24384491-24384607)
chr5 (1-78)||(27869758-27869834)
chr5 (55-131)||(16256248-16256323)
chr5 (16-73)||(7785121-7785178)
chr5 (3-41)||(23671491-23671529)
chr5 (53-131)||(27869694-27869771)
chr5 (1-38)||(22358014-22358051)
chr5 (9-78)||(22469963-22470035)
chr5 (5-44)||(7785110-7785150)
[»] chr2 (59 HSPs)
chr2 (6-156)||(21239551-21239703)
chr2 (6-156)||(21242101-21242253)
chr2 (5-155)||(31755525-31755676)
chr2 (6-150)||(28348671-28348816)
chr2 (6-150)||(28352496-28352641)
chr2 (5-155)||(24504268-24504418)
chr2 (16-156)||(25036024-25036164)
chr2 (3-148)||(31503118-31503264)
chr2 (3-148)||(31505684-31505830)
chr2 (1-152)||(44620562-44620714)
chr2 (16-150)||(23374863-23374997)
chr2 (16-152)||(41685077-41685215)
chr2 (18-150)||(10040234-10040366)
chr2 (53-156)||(12628182-12628286)
chr2 (18-130)||(28348770-28348882)
chr2 (3-130)||(31503254-31503382)
chr2 (1-78)||(24504384-24504460)
chr2 (3-130)||(31505820-31505948)
chr2 (16-131)||(23339599-23339714)
chr2 (12-130)||(23339478-23339595)
chr2 (1-130)||(25035968-25036098)
chr2 (14-130)||(25035942-25036059)
chr2 (15-131)||(21239444-21239559)
chr2 (15-131)||(21241994-21242109)
chr2 (6-130)||(23339549-23339673)
chr2 (58-131)||(24275709-24275782)
chr2 (1-78)||(31755642-31755718)
chr2 (5-116)||(21239472-21239583)
chr2 (5-116)||(21242022-21242133)
chr2 (12-131)||(20591420-20591540)
chr2 (1-131)||(23339506-23339635)
chr2 (16-119)||(31503303-31503408)
chr2 (16-119)||(31505869-31505974)
chr2 (16-130)||(31755629-31755742)
chr2 (16-131)||(24274239-24274354)
chr2 (16-130)||(44620624-44620738)
chr2 (16-130)||(24504371-24504484)
chr2 (6-130)||(24274267-24274392)
chr2 (3-110)||(31518254-31518366)
chr2 (16-78)||(22109451-22109513)
chr2 (16-130)||(31518274-31518393)
chr2 (1-78)||(20591448-20591526)
chr2 (1-78)||(28348783-28348860)
chr2 (6-70)||(23339627-23339692)
chr2 (1-78)||(23374896-23374973)
chr2 (1-41)||(22109449-22109489)
chr2 (53-131)||(22109437-22109515)
chr2 (1-62)||(24274341-24274403)
chr2 (53-110)||(24274237-24274293)
chr2 (50-130)||(41685072-41685153)
chr2 (50-90)||(28352634-28352674)
chr2 (3-78)||(10040258-10040333)
chr2 (8-73)||(23085339-23085405)
chr2 (16-73)||(23085419-23085478)
chr2 (12-73)||(31518498-31518561)
chr2 (16-117)||(28352568-28352669)
chr2 (53-130)||(31503332-31503410)
chr2 (53-130)||(31505898-31505976)
chr2 (3-130)||(22840917-22841049)
[»] chr7 (90 HSPs)
chr7 (5-155)||(124553-124704)
chr7 (6-151)||(16005868-16006015)
chr7 (6-155)||(8775848-8775999)
chr7 (16-156)||(38827772-38827912)
chr7 (6-151)||(4993038-4993185)
chr7 (3-148)||(21743727-21743873)
chr7 (3-150)||(13850024-13850173)
chr7 (1-152)||(48784825-48784977)
chr7 (1-142)||(14192134-14192275)
chr7 (4-152)||(13733868-13734017)
chr7 (3-150)||(16573070-16573219)
chr7 (3-150)||(16592443-16592592)
chr7 (1-131)||(17506164-17506295)
chr7 (1-131)||(17546919-17547050)
chr7 (16-131)||(13395897-13396014)
chr7 (3-142)||(14189381-14189520)
chr7 (12-130)||(8776031-8776148)
chr7 (6-131)||(16458906-16459031)
chr7 (5-117)||(21743690-21743803)
chr7 (6-130)||(38827877-38828002)
chr7 (19-131)||(13255429-13255541)
chr7 (4-130)||(13395806-13395933)
chr7 (44-131)||(711010-711097)
chr7 (1-130)||(13395842-13395973)
chr7 (6-142)||(48743232-48743369)
chr7 (12-131)||(16006085-16006203)
chr7 (1-131)||(48784925-48785055)
chr7 (16-130)||(21743623-21743737)
chr7 (1-130)||(38827838-38827968)
chr7 (5-130)||(16006047-16006172)
chr7 (1-78)||(124511-124587)
chr7 (6-90)||(13849910-13849995)
chr7 (18-90)||(21065502-21065575)
chr7 (4-131)||(48784964-48785091)
chr7 (16-131)||(8775991-8776105)
chr7 (16-131)||(13255705-13255819)
chr7 (5-115)||(8775968-8776078)
chr7 (6-116)||(16005983-16006093)
chr7 (53-131)||(47976031-47976109)
chr7 (6-130)||(16573169-16573293)
chr7 (6-130)||(16592369-16592493)
chr7 (6-131)||(14189305-14189431)
chr7 (1-130)||(48784887-48785016)
chr7 (19-131)||(11660763-11660874)
chr7 (1-78)||(13255719-13255795)
chr7 (16-131)||(48785003-48785118)
chr7 (16-130)||(13395779-13395893)
chr7 (16-130)||(124487-124600)
chr7 (6-87)||(4993181-4993263)
chr7 (6-130)||(13849988-13850113)
chr7 (55-131)||(14192072-14192147)
chr7 (6-115)||(13255644-13255752)
chr7 (53-130)||(709608-709684)
chr7 (53-130)||(13849880-13849956)
chr7 (16-137)||(16573202-16573321)
chr7 (16-137)||(16592341-16592460)
chr7 (55-131)||(17506100-17506177)
chr7 (55-131)||(17547037-17547114)
chr7 (53-130)||(38827956-38828032)
chr7 (53-130)||(48743323-48743399)
chr7 (16-131)||(13849882-13849996)
chr7 (16-78)||(709714-709777)
chr7 (1-76)||(13255644-13255718)
chr7 (84-131)||(13407739-13407786)
chr7 (1-76)||(14189418-14189493)
chr7 (16-110)||(4325016-4325114)
chr7 (16-77)||(13733841-13733902)
chr7 (16-129)||(48743284-48743397)
chr7 (1-78)||(11660777-11660853)
chr7 (1-78)||(13255443-13255520)
chr7 (16-110)||(15725457-15725553)
chr7 (12-131)||(14192068-14192186)
chr7 (16-131)||(16006007-16006121)
chr7 (6-130)||(14192100-14192223)
chr7 (53-131)||(35365977-35366054)
chr7 (12-110)||(40555752-40555854)
chr7 (16-77)||(709610-709670)
chr7 (6-78)||(35365952-35366024)
chr7 (6-69)||(709638-709702)
chr7 (84-128)||(13865424-13865468)
chr7 (3-73)||(15689926-15689997)
chr7 (3-73)||(15697519-15697590)
chr7 (84-131)||(21735541-21735588)
chr7 (16-130)||(38827916-38828030)
chr7 (1-73)||(15725455-15725529)
chr7 (54-131)||(16573247-16573322)
chr7 (54-131)||(16592340-16592415)
chr7 (11-73)||(12202126-12202189)
chr7 (98-130)||(12757143-12757175)
chr7 (6-38)||(21065568-21065600)
[»] chr4 (102 HSPs)
chr4 (5-155)||(55503109-55503260)
chr4 (6-150)||(56116213-56116358)
chr4 (6-155)||(41791195-41791347)
chr4 (16-155)||(6511370-6511510)
chr4 (6-150)||(15242525-15242671)
chr4 (1-156)||(10313340-10313495)
chr4 (3-148)||(14698249-14698395)
chr4 (4-152)||(16359093-16359243)
chr4 (3-148)||(4170557-4170703)
chr4 (4-152)||(28382453-28382602)
chr4 (4-152)||(15280424-15280573)
chr4 (17-150)||(33684861-33684994)
chr4 (26-150)||(27027527-27027652)
chr4 (1-131)||(16278641-16278772)
chr4 (4-152)||(286718-286868)
chr4 (5-103)||(31117452-31117550)
chr4 (16-152)||(47127140-47127278)
chr4 (12-131)||(53388029-53388150)
chr4 (19-152)||(24047832-24047965)
chr4 (5-117)||(14698319-14698432)
chr4 (17-130)||(14942704-14942817)
chr4 (5-116)||(4170628-4170740)
chr4 (6-131)||(15989756-15989881)
chr4 (1-131)||(16278522-16278654)
chr4 (8-106)||(3336973-3337072)
chr4 (16-130)||(6511474-6511588)
chr4 (6-116)||(15242447-15242557)
chr4 (16-127)||(15989960-15990071)
chr4 (16-131)||(33848480-33848595)
chr4 (6-117)||(31117415-31117525)
chr4 (6-130)||(16278488-16278613)
chr4 (6-130)||(14942653-14942777)
chr4 (16-130)||(4170693-4170807)
chr4 (1-131)||(9388405-9388534)
chr4 (16-130)||(14698385-14698499)
chr4 (12-130)||(16278417-16278534)
chr4 (12-130)||(33848599-33848716)
chr4 (53-131)||(6511551-6511629)
chr4 (12-131)||(15989995-15990115)
chr4 (1-130)||(31117372-31117498)
chr4 (6-130)||(33848521-33848645)
chr4 (1-78)||(55503067-55503143)
chr4 (5-116)||(41791315-41791426)
chr4 (3-109)||(27027653-27027760)
chr4 (1-131)||(33848559-33848688)
chr4 (18-130)||(56115949-56116063)
chr4 (18-130)||(56116029-56116141)
chr4 (4-130)||(16359155-16359282)
chr4 (17-131)||(21190078-21190192)
chr4 (6-76)||(56116095-56116166)
chr4 (1-130)||(6511435-6511564)
chr4 (1-130)||(16278445-16278573)
chr4 (6-90)||(15449787-15449872)
chr4 (16-130)||(286780-286895)
chr4 (16-130)||(16359195-16359309)
chr4 (16-130)||(55503043-55503156)
chr4 (22-131)||(9388387-9388495)
chr4 (1-78)||(13877720-13877798)
chr4 (6-90)||(15448464-15448549)
chr4 (16-150)||(13881346-13881481)
chr4 (1-72)||(13881385-13881457)
chr4 (12-131)||(41791339-41791457)
chr4 (1-150)||(13877687-13877829)
chr4 (53-130)||(3337090-3337167)
chr4 (53-130)||(14942623-14942699)
chr4 (6-78)||(21190105-21190178)
chr4 (98-155)||(31131813-31131870)
chr4 (6-78)||(33848494-33848567)
chr4 (55-150)||(20899759-20899854)
chr4 (16-130)||(28382515-28382629)
chr4 (16-119)||(31117348-31117450)
chr4 (16-78)||(15280397-15280459)
chr4 (84-131)||(18221102-18221149)
chr4 (12-78)||(20899755-20899821)
chr4 (1-78)||(28382488-28382566)
chr4 (2-118)||(56116130-56116247)
chr4 (20-129)||(15448402-15448509)
chr4 (6-78)||(15989930-15990003)
chr4 (1-78)||(33684884-33684961)
chr4 (43-131)||(15989834-15989921)
chr4 (1-80)||(56116051-56116130)
chr4 (16-78)||(6511565-6511627)
chr4 (16-110)||(8710553-8710651)
chr4 (16-78)||(14942625-14942686)
chr4 (3-41)||(20899785-20899823)
chr4 (1-71)||(24047853-24047923)
chr4 (53-130)||(15242417-15242493)
chr4 (1-78)||(15989770-15989847)
chr4 (50-130)||(47127135-47127216)
chr4 (1-131)||(56115971-56116103)
chr4 (54-130)||(15449758-15449833)
chr4 (53-131)||(10313443-10313521)
chr4 (16-78)||(10313456-10313519)
chr4 (16-130)||(15449759-15449872)
chr4 (53-130)||(3336989-3337066)
chr4 (16-78)||(3337103-3337165)
chr4 (54-110)||(10704514-10704572)
chr4 (54-110)||(10918284-10918342)
chr4 (50-119)||(14698434-14698504)
chr4 (16-131)||(15242419-15242533)
chr4 (11-73)||(18079533-18079597)
chr4 (3-78)||(27027560-27027636)
[»] chr3 (93 HSPs)
chr3 (6-149)||(10989981-10990125)
chr3 (6-149)||(52339110-52339254)
chr3 (1-156)||(15010474-15010630)
chr3 (6-148)||(54972865-54973009)
chr3 (6-148)||(54975475-54975619)
chr3 (6-148)||(54978085-54978229)
chr3 (16-156)||(603940-604081)
chr3 (4-152)||(14037805-14037955)
chr3 (4-152)||(14041273-14041423)
chr3 (1-152)||(2035361-2035514)
chr3 (1-152)||(2039102-2039255)
chr3 (1-152)||(2042843-2042996)
chr3 (6-150)||(6806047-6806192)
chr3 (47-150)||(17211118-17211221)
chr3 (1-131)||(16799368-16799500)
chr3 (1-130)||(10554073-10554202)
chr3 (16-155)||(14951843-14951983)
chr3 (55-156)||(7631908-7632010)
chr3 (12-131)||(16799487-16799608)
chr3 (1-148)||(18958527-18958677)
chr3 (12-130)||(23396054-23396173)
chr3 (53-156)||(54046438-54046542)
chr3 (3-150)||(179765-179914)
chr3 (16-152)||(39230409-39230545)
chr3 (27-131)||(1989371-1989476)
chr3 (1-131)||(54973001-54973132)
chr3 (1-131)||(54975611-54975742)
chr3 (1-131)||(54978221-54978352)
chr3 (1-130)||(2039063-2039193)
chr3 (1-130)||(2042804-2042934)
chr3 (43-152)||(10834489-10834597)
chr3 (4-130)||(2035325-2035452)
chr3 (1-131)||(2038868-2038998)
chr3 (1-131)||(2038946-2039076)
chr3 (1-131)||(2042609-2042739)
chr3 (1-131)||(2042687-2042817)
chr3 (1-130)||(2039024-2039153)
chr3 (1-130)||(2042765-2042894)
chr3 (6-130)||(179729-179854)
chr3 (4-131)||(2038832-2038959)
chr3 (4-131)||(2042573-2042700)
chr3 (18-130)||(10989915-10990027)
chr3 (16-150)||(23396177-23396311)
chr3 (12-130)||(54973081-54973198)
chr3 (12-130)||(54975691-54975808)
chr3 (12-130)||(54978301-54978418)
chr3 (16-90)||(10554034-10554109)
chr3 (6-131)||(52338992-52339118)
chr3 (5-130)||(54973041-54973167)
chr3 (5-130)||(54975651-54975777)
chr3 (5-130)||(54978261-54978387)
chr3 (16-131)||(2038805-2038920)
chr3 (16-131)||(2042546-2042661)
chr3 (12-131)||(179697-179816)
chr3 (16-130)||(2035298-2035412)
chr3 (43-131)||(6818901-6818988)
chr3 (16-130)||(14037867-14037982)
chr3 (16-130)||(14041335-14041450)
chr3 (53-101)||(15446413-15446461)
chr3 (16-131)||(23396098-23396214)
chr3 (16-130)||(6806019-6806132)
chr3 (53-131)||(30206556-30206635)
chr3 (16-130)||(52338964-52339078)
chr3 (1-78)||(14951867-14951945)
chr3 (16-130)||(10554113-10554226)
chr3 (12-78)||(18958639-18958705)
chr3 (3-116)||(54972977-54973091)
chr3 (3-116)||(54975587-54975701)
chr3 (3-116)||(54978197-54978311)
chr3 (12-110)||(3394997-3395099)
chr3 (53-130)||(6806017-6806093)
chr3 (20-91)||(6819013-6819085)
chr3 (54-130)||(52338963-52339038)
chr3 (16-78)||(30206558-30206621)
chr3 (4-78)||(39230444-39230518)
chr3 (1-130)||(14951802-14951918)
chr3 (2-78)||(179804-179881)
chr3 (16-130)||(6819053-6819169)
chr3 (1-76)||(10554010-10554085)
chr3 (1-71)||(603964-604035)
chr3 (12-78)||(14951774-14951840)
chr3 (16-78)||(15010450-15010512)
chr3 (1-78)||(10989937-10990014)
chr3 (19-130)||(12855990-12856105)
chr3 (11-73)||(15232139-15232203)
chr3 (11-73)||(15238007-15238071)
chr3 (1-41)||(55292767-55292807)
chr3 (99-131)||(55292787-55292819)
chr3 (16-110)||(3395042-3395140)
chr3 (16-78)||(17211151-17211213)
chr3 (3-130)||(9885-10016)
chr3 (2-71)||(10834486-10834555)
chr3 (43-110)||(18367781-18367850)
[»] chr1 (51 HSPs)
chr1 (6-151)||(45306842-45306989)
chr1 (6-150)||(293762-293907)
chr1 (3-148)||(20586715-20586861)
chr1 (3-148)||(20579022-20579168)
chr1 (1-152)||(20630905-20631058)
chr1 (16-156)||(24087103-24087244)
chr1 (1-152)||(36181203-36181356)
chr1 (6-149)||(21181503-21181647)
chr1 (12-150)||(18270180-18270319)
chr1 (12-150)||(18274834-18274973)
chr1 (16-150)||(28204700-28204835)
chr1 (1-156)||(2333395-2333552)
chr1 (4-152)||(14432690-14432840)
chr1 (16-152)||(22900644-22900780)
chr1 (53-152)||(37358180-37358279)
chr1 (16-130)||(18823462-18823577)
chr1 (16-131)||(16400611-16400728)
chr1 (1-131)||(296177-296307)
chr1 (1-131)||(20901017-20901146)
chr1 (6-130)||(2333361-2333485)
chr1 (20-131)||(19209423-19209536)
chr1 (19-131)||(28312083-28312195)
chr1 (2-117)||(20586785-20586901)
chr1 (2-115)||(20579094-20579208)
chr1 (4-130)||(20630967-20631094)
chr1 (12-131)||(22900562-22900681)
chr1 (5-116)||(45306957-45307068)
chr1 (12-131)||(45306981-45307099)
chr1 (12-130)||(296218-296335)
chr1 (12-130)||(2333289-2333407)
chr1 (5-130)||(20579119-20579244)
chr1 (12-130)||(20579158-20579275)
chr1 (5-130)||(20586812-20586937)
chr1 (12-130)||(20586851-20586968)
chr1 (17-131)||(21181397-21181511)
chr1 (6-78)||(22900594-22900667)
chr1 (16-130)||(14432663-14432778)
chr1 (16-130)||(20631007-20631121)
chr1 (16-130)||(36181265-36181380)
chr1 (22-130)||(293861-293970)
chr1 (6-110)||(18823521-18823627)
chr1 (1-78)||(22900668-22900745)
chr1 (16-131)||(20901094-20901210)
chr1 (15-130)||(18823541-18823656)
chr1 (16-130)||(21181436-21181549)
chr1 (3-78)||(20901108-20901184)
chr1 (1-78)||(24087142-24087220)
chr1 (1-78)||(28312097-28312174)
chr1 (53-131)||(20901133-20901212)
chr1 (16-78)||(293874-293935)
chr1 (3-78)||(21181341-21181419)
[»] scaffold0107 (3 HSPs)
scaffold0107 (6-150)||(2758-2903)
scaffold0107 (12-78)||(2870-2935)
scaffold0107 (55-130)||(2857-2931)
[»] chr8 (71 HSPs)
chr8 (6-129)||(44431492-44431616)
chr8 (6-155)||(45135351-45135502)
chr8 (16-155)||(28853500-28853639)
chr8 (6-148)||(7301595-7301738)
chr8 (18-150)||(363594-363727)
chr8 (6-150)||(43111889-43112034)
chr8 (16-156)||(44523204-44523345)
chr8 (1-152)||(22145759-22145913)
chr8 (3-128)||(6608696-6608822)
chr8 (12-149)||(21415580-21415717)
chr8 (1-131)||(20459874-20460004)
chr8 (6-131)||(32949542-32949668)
chr8 (16-131)||(19881725-19881841)
chr8 (16-149)||(17614513-17614646)
chr8 (4-152)||(22059756-22059905)
chr8 (5-138)||(6608659-6608792)
chr8 (5-117)||(28853577-28853690)
chr8 (1-150)||(362206-362356)
chr8 (1-130)||(7301434-7301563)
chr8 (30-142)||(38186114-38186226)
chr8 (6-90)||(7301517-7301602)
chr8 (19-131)||(21861647-21861759)
chr8 (16-131)||(17794970-17795085)
chr8 (12-131)||(45135241-45135359)
chr8 (16-130)||(6608592-6608706)
chr8 (1-130)||(28853604-28853732)
chr8 (6-130)||(17795011-17795135)
chr8 (18-130)||(44431570-44431682)
chr8 (12-131)||(17614609-17614728)
chr8 (4-130)||(22145723-22145851)
chr8 (12-130)||(7301368-7301485)
chr8 (5-115)||(45135272-45135382)
chr8 (6-130)||(19881805-19881930)
chr8 (18-90)||(44431727-44431800)
chr8 (16-130)||(22145696-22145811)
chr8 (12-130)||(17795089-17795206)
chr8 (16-130)||(19881884-19881998)
chr8 (6-78)||(17614623-17614696)
chr8 (12-130)||(19881923-19882042)
chr8 (1-131)||(17795049-17795178)
chr8 (5-78)||(7301399-7301472)
chr8 (3-130)||(22521912-22522044)
chr8 (43-131)||(20454262-20454349)
chr8 (53-152)||(24708120-24708219)
chr8 (1-64)||(17614559-17614622)
chr8 (16-130)||(28853643-28853756)
chr8 (1-78)||(44523228-44523306)
chr8 (3-130)||(15267118-15267250)
chr8 (1-78)||(38186124-38186201)
chr8 (12-78)||(21415540-21415607)
chr8 (16-130)||(32949583-32949696)
chr8 (1-78)||(363627-363705)
chr8 (16-130)||(43111988-43112100)
chr8 (6-70)||(17794992-17795057)
chr8 (1-78)||(21861668-21861745)
chr8 (53-130)||(32949622-32949698)
chr8 (56-131)||(15004830-15004906)
chr8 (16-129)||(22059690-22059803)
chr8 (4-78)||(22059717-22059791)
chr8 (4-41)||(24708149-24708186)
chr8 (1-41)||(15004100-15004140)
chr8 (12-130)||(20459915-20460032)
chr8 (16-78)||(15004076-15004138)
chr8 (1-71)||(22059792-22059863)
chr8 (15-110)||(22434598-22434697)
chr8 (17-78)||(15004830-15004892)
chr8 (1-39)||(20454315-20454353)
chr8 (44-78)||(44523193-44523227)
chr8 (93-130)||(17272816-17272853)
chr8 (6-78)||(44431661-44431734)
chr8 (86-130)||(44431766-44431810)
[»] scaffold0109 (5 HSPs)
scaffold0109 (6-150)||(1989-2134)
scaffold0109 (18-130)||(2166-2278)
scaffold0109 (6-90)||(2127-2212)
scaffold0109 (1-116)||(2140-2256)
scaffold0109 (57-130)||(2244-2318)
[»] scaffold0044 (2 HSPs)
scaffold0044 (7-131)||(6118-6243)
scaffold0044 (53-130)||(6087-6163)
[»] scaffold0141 (4 HSPs)
scaffold0141 (3-155)||(32715-32868)
scaffold0141 (5-117)||(32792-32905)
scaffold0141 (1-78)||(32871-32947)
scaffold0141 (16-130)||(32858-32971)
[»] scaffold0049 (4 HSPs)
scaffold0049 (3-155)||(81944-82097)
scaffold0049 (5-117)||(81907-82020)
scaffold0049 (1-78)||(81865-81941)
scaffold0049 (16-130)||(81841-81954)
[»] scaffold0525 (7 HSPs)
scaffold0525 (1-148)||(11291-11440)
scaffold0525 (1-131)||(8681-8811)
scaffold0525 (1-130)||(8799-8928)
scaffold0525 (3-130)||(11215-11342)
scaffold0525 (3-130)||(11254-11382)
scaffold0525 (16-131)||(11189-11304)
scaffold0525 (12-130)||(8838-8956)
[»] scaffold0003 (3 HSPs)
scaffold0003 (18-129)||(137484-137596)
scaffold0003 (18-90)||(137641-137714)
scaffold0003 (1-130)||(137562-137692)
[»] scaffold0151 (4 HSPs)
scaffold0151 (1-150)||(2101-2251)
scaffold0151 (1-150)||(8945-9095)
scaffold0151 (16-130)||(2161-2275)
scaffold0151 (16-130)||(9005-9119)
[»] scaffold0413 (2 HSPs)
scaffold0413 (4-150)||(10549-10696)
scaffold0413 (16-130)||(10609-10723)
[»] scaffold0034 (3 HSPs)
scaffold0034 (1-131)||(34940-35071)
scaffold0034 (1-110)||(34901-35011)
scaffold0034 (16-78)||(34877-34939)
[»] scaffold0586 (2 HSPs)
scaffold0586 (12-149)||(1484-1621)
scaffold0586 (12-78)||(1594-1661)
[»] scaffold0126 (3 HSPs)
scaffold0126 (6-150)||(5680-5825)
scaffold0126 (16-117)||(5752-5853)
scaffold0126 (53-117)||(5792-5855)
[»] scaffold0338 (2 HSPs)
scaffold0338 (6-131)||(4011-4137)
scaffold0338 (12-130)||(3939-4057)
[»] scaffold0635 (2 HSPs)
scaffold0635 (18-150)||(6704-6836)
scaffold0635 (3-78)||(6737-6812)
[»] scaffold0021 (2 HSPs)
scaffold0021 (16-152)||(134263-134401)
scaffold0021 (15-78)||(134302-134366)
[»] scaffold0004 (4 HSPs)
scaffold0004 (1-150)||(59146-59294)
scaffold0004 (12-129)||(59283-59401)
scaffold0004 (1-78)||(59256-59333)
scaffold0004 (16-110)||(205344-205442)
[»] scaffold0825 (2 HSPs)
scaffold0825 (6-150)||(1873-2018)
scaffold0825 (16-130)||(1805-1919)
[»] scaffold0042 (6 HSPs)
scaffold0042 (3-131)||(50696-50825)
scaffold0042 (9-131)||(50774-50900)
scaffold0042 (6-110)||(50877-50982)
scaffold0042 (1-90)||(50697-50787)
scaffold0042 (12-78)||(50949-51014)
scaffold0042 (55-127)||(50939-51010)
[»] scaffold1276 (2 HSPs)
scaffold1276 (53-150)||(112-209)
scaffold1276 (16-78)||(145-207)
[»] scaffold0026 (6 HSPs)
scaffold0026 (16-150)||(20783-20919)
scaffold0026 (6-130)||(20923-21048)
scaffold0026 (17-150)||(23861-23996)
scaffold0026 (16-130)||(20883-20998)
scaffold0026 (65-130)||(23961-24026)
scaffold0026 (27-130)||(23921-24025)
[»] scaffold0447 (2 HSPs)
scaffold0447 (16-150)||(13893-14026)
scaffold0447 (3-73)||(14050-14122)
[»] scaffold0383 (2 HSPs)
scaffold0383 (16-150)||(11888-12021)
scaffold0383 (3-73)||(12045-12117)
[»] scaffold0008 (5 HSPs)
scaffold0008 (1-123)||(13174-13296)
scaffold0008 (12-130)||(12504-12623)
scaffold0008 (16-119)||(12587-12690)
scaffold0008 (3-129)||(13056-13185)
scaffold0008 (16-130)||(13030-13146)
[»] scaffold0395 (3 HSPs)
scaffold0395 (16-130)||(8998-9112)
scaffold0395 (18-117)||(8961-9060)
scaffold0395 (18-117)||(8921-9021)
[»] scaffold0381 (2 HSPs)
scaffold0381 (16-150)||(14026-14162)
scaffold0381 (12-130)||(13982-14102)
[»] scaffold0058 (4 HSPs)
scaffold0058 (1-131)||(40238-40369)
scaffold0058 (1-78)||(40160-40237)
scaffold0058 (17-131)||(40137-40251)
scaffold0058 (1-130)||(40199-40328)
[»] scaffold0500 (3 HSPs)
scaffold0500 (16-150)||(11768-11903)
scaffold0500 (12-131)||(11684-11805)
scaffold0500 (1-78)||(11792-11870)
[»] scaffold0860 (3 HSPs)
scaffold0860 (3-131)||(151-280)
scaffold0860 (1-78)||(244-321)
scaffold0860 (1-78)||(165-243)
[»] scaffold0609 (5 HSPs)
scaffold0609 (3-131)||(4316-4445)
scaffold0609 (1-78)||(4330-4408)
scaffold0609 (1-74)||(4452-4525)
scaffold0609 (1-130)||(4357-4486)
scaffold0609 (17-78)||(4487-4548)
[»] scaffold0012 (1 HSPs)
scaffold0012 (18-131)||(223630-223743)
[»] scaffold1098 (3 HSPs)
scaffold1098 (17-150)||(1045-1180)
scaffold1098 (65-130)||(1145-1210)
scaffold1098 (27-130)||(1105-1209)
[»] scaffold0491 (3 HSPs)
scaffold0491 (55-155)||(10442-10542)
scaffold0491 (12-78)||(10480-10546)
scaffold0491 (1-41)||(10478-10518)
[»] scaffold0071 (1 HSPs)
scaffold0071 (53-101)||(15731-15779)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-67)||(1414-1481)
scaffold0131 (12-103)||(1417-1509)
[»] scaffold0007 (3 HSPs)
scaffold0007 (6-71)||(165648-165714)
scaffold0007 (27-110)||(165631-165714)
scaffold0007 (64-130)||(165629-165694)
[»] scaffold0556 (3 HSPs)
scaffold0556 (1-72)||(9638-9710)
scaffold0556 (85-131)||(9562-9608)
scaffold0556 (16-131)||(9618-9734)
[»] scaffold0016 (1 HSPs)
scaffold0016 (84-150)||(120016-120082)
[»] scaffold0011 (2 HSPs)
scaffold0011 (15-130)||(21806-21926)
scaffold0011 (12-78)||(21844-21913)
[»] scaffold0364 (2 HSPs)
scaffold0364 (16-110)||(7089-7186)
scaffold0364 (3-73)||(7087-7159)
[»] scaffold0117 (1 HSPs)
scaffold0117 (8-73)||(33623-33690)
[»] scaffold0106 (1 HSPs)
scaffold0106 (20-103)||(20731-20818)
[»] scaffold0180 (1 HSPs)
scaffold0180 (43-110)||(29349-29418)
[»] scaffold0130 (1 HSPs)
scaffold0130 (16-72)||(2812-2869)
[»] scaffold0069 (1 HSPs)
scaffold0069 (45-78)||(34489-34522)
[»] scaffold0607 (1 HSPs)
scaffold0607 (12-40)||(2742-2770)
[»] scaffold0388 (1 HSPs)
scaffold0388 (11-73)||(16151-16215)
[»] scaffold0371 (1 HSPs)
scaffold0371 (8-70)||(5316-5379)
[»] scaffold0207 (1 HSPs)
scaffold0207 (19-73)||(8649-8704)
[»] scaffold0149 (1 HSPs)
scaffold0149 (8-70)||(28096-28159)


Alignment Details
Target: chr6 (Bit Score: 122; Significance: 1e-62; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 8522607 - 8522455
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg--ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8522607 tcattcaaccgttgagggcttatgccctggaattgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggct 8522508  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 156  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  8522507 tatgccccggaatgcttagtcattcaatgtgttgaaaatagtaccacgtcgta 8522455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 15686455 - 15686604
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttggggg 101  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  |||||||||||||||||||    
T  15686455 tgtcattcaacagttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggctcatgccctggaatgccttgtcattcaaattgttggggg 15686553  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  15686554 cttatgccccggaatgcttagtcattcaacccgttggaaatagtaccacgt 15686604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 16102121 - 16101971
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttggggg 101  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  |||||||||||||||||||    
T  16102121 tgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaattgttggggg 16102022  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  16102021 cttatgccccggaatgcttagtcattcaacccgttgaaattagtaccacgt 16101971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 23352243 - 23352131
Alignment:
Q  19 gagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatg 117  Q
    ||||||| ||||| |||||||||  ||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  23352243 gagggctcatgccttggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgtttatcattcaaattgttgggggcttatgccccggaatg 23352145  T
Q  118 cttagtcattcaac 131  Q
    ||||||||||||||    
T  23352144 cttagtcattcaac 23352131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 13764088 - 13763958
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggg 99  Q
    ||||||||||||| | |||||||||| ||||| ||||||  |  ||||||||| ||||||||||| ||||||||||||| | ||||||||||||||||||    
T  13764088 ctttgtcattcaaactgttgagggctcatgccgtggaatttttatcattcaat-tgttgagggcttatgccctggaatgtttatcattcaaattgttggg 13763990  T
Q  100 ggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||||||||||||||||||||||||||    
T  13763989 ggcttatgccccggaatgcttagtcattcaac 13763958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 16829603 - 16829470
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  |||||||||||||||||||||||||||||||    
T  16829603 gttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccccgg 16829505  T
Q  114 aatgcttagtcattcaacgtgttggaaatagtacc 148  Q
    | ||||||||||||||||  |||| ||||||||||    
T  16829504 attgcttagtcattcaacccgttgaaaatagtacc 16829470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 29492560 - 29492427
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| |||||||||||||||  ||||||||| | ||||||||||||||||||||||||  || |||||||||||||||||||||||||||||||    
T  29492560 gttgagggctcatgccctggaatgctttgtcattcaacc-gttgagggctcatgccctggaatgcctcgtcattcaaattgttgggggcttatgccccgg 29492462  T
Q  114 aatgcttagtcattcaacgtgttggaaatagtacc 148  Q
    |||||||||||||||| |  |||| ||||||||||    
T  29492461 aatgcttagtcattcagcccgttgaaaatagtacc 29492427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 16812582 - 16812450
Alignment:
Q  17 ttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgga 114  Q
    ||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||||    
T  16812582 ttgagggctcatgccctggaatgctatgtcattcaa-ctgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccccgga 16812484  T
Q  115 atgcttagtcattcaacgtgttggaaatagtacc 148  Q
     ||||||||||||||||  |||| ||||||||||    
T  16812483 ttgcttagtcattcaacccgttgaaaatagtacc 16812450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 24440982 - 24440865
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgcccc 111  Q
    |||||||||||||| ||||||||||||| |  |||||||| |||||||||||||||||| ||||||| | |||||| |||||||| ||||||||||||||    
T  24440982 aaccgttgagggctcatgccctggaatgttaatcattcaaactgttgagggctcatgccttggaatgtttatcattgaaattgtt-ggggcttatgcccc 24440884  T
Q  112 ggaatgcttagtcattcaa 130  Q
    ||||||| |||||||||||    
T  24440883 ggaatgcgtagtcattcaa 24440865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 15538948 - 15538831
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| ||||||||| |||||  ||||||||| ||||||||||||||||||||||||||  |  |||||||||||||||||||||||||||| ||    
T  15538948 gttgagggctcatgccctgggatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccctgg 15538849  T
Q  114 aatgcttagtcattcaac 131  Q
    ||||||||||||||||||    
T  15538848 aatgcttagtcattcaac 15538831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 15539072 - 15538952
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgcc 109  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |   |||||||||||||||||||||||||     
T  15539072 aaccgttgagggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgccattcaaattgttgggggcttatgct 15538973  T
Q  110 ccggaatgcttagtcattcaa 130  Q
    |||||| |||| |||||||||    
T  15538972 ccggaaagctttgtcattcaa 15538952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 29848495 - 29848614
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||||||||||| |||||||  ||||||||| |||||||||||| ||||||||||||| | |||||||||||| ||| |||||||||||     
T  29848495 aaccgttgagggcttatgcccttgaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgtttatcattcaaatttttgagggcttatgcct 29848593  T
Q  111 cggaatgcttagtcattcaac 131  Q
    || ||||||||||||||||||    
T  29848594 cgaaatgcttagtcattcaac 29848614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 221747 - 221613
Alignment:
Q  18 tgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaat 116  Q
    |||||| | ||||||||||||||| ||||| ||||| |||||| |||| ||||||||||||| | |||||||||||||||||||||||||||||| ||||    
T  221747 tgagggatcatgccctggaatgcttcgtcactcaat-tgttgatggcttatgccctggaatgtttatcattcaaattgttgggggcttatgccccagaat 221649  T
Q  117 gcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||||||||  |||| |||| || ||||||    
T  221648 gcttagtcattcaacacgttgaaaatggtgccacgt 221613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 12595735 - 12595586
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttggggg 101  Q
    ||||||||||| ||||||||||||||| || |||||||  ||||||||| ||||||||||||||||||||||||||  |  ||||||||||||||||||     
T  12595735 tgtcattcaactgttgagggcttatgctctagaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgccttgtcattcaaattgttgggga 12595637  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||  |||||||||||||||||||  |||| || ||||| |||||    
T  12595636 cttatgccctagaatgcttagtcattcaacccgttgaaattagtatcacgt 12595586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 2288262 - 2288394
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatca-tcattcaaattgttg 97  Q
    ||||||||||||| | |||||||||| | |||||||||||| | ||||||||| || ||||||| ||||||||||||||| |   |||||||||||||||    
T  2288262 ctttgtcattcaaactgttgagggctcaagccctggaatgccttgtcattcaa-ctattgagggttcatgccctggaatgctttgtcattcaaattgttg 2288360  T
Q  98 ggggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||||||||||||||||||||||||||||    
T  2288361 ggggcttatgccccggaatgcttagtcattcaac 2288394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 148
Target Start/End: Complemental strand, 16804752 - 16804631
Alignment:
Q  28 tgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccggaatgcttagtca 125  Q
    ||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  |||||||||||||||||| ||||||||||||| ||||||||||    
T  16804752 tgccctggaatgctatgtcattcaa-ctgttgagggctcatgccctggaatgccttgtcattcaaattgttggggtcttatgccccggattgcttagtca 16804654  T
Q  126 ttcaacgtgttggaaatagtacc 148  Q
    ||||||  |||| ||||||||||    
T  16804653 ttcaacccgttgaaaatagtacc 16804631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 13764434 - 13764310
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||  |||||||||||||||||| ||||| |  ||||||||| |||||||||||||||||||||||||| | ||||||| ||||||||  |||||    
T  13764434 tcattcaattgttgagggcttatgccctagaatgatttgtcattcaaactgttgagggctcatgccctggaatgtttatcattc-aattgttgatggctt 13764336  T
Q  105 atgccccggaatgcttagtcattcaa 130  Q
    |||||| ||||||||| |||||||||    
T  13764335 atgccctggaatgctttgtcattcaa 13764310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 8522717 - 8522599
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| ||||| ||||||    
T  8522717 aaccgttgagggctcatgccctggaatgctcgtcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccc 8522619  T
Q  111 cggaatgcttagtcattcaac 131  Q
     |||||| ||| |||||||||    
T  8522618 tggaatg-ttaatcattcaac 8522599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 23621264 - 23621394
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    ||||| |||||||| |||||||| | |||||||||||||||  ||||||||| |||||||||||| |||||||| ||||  |  |||||||||||||||     
T  23621264 ctttgacattcaactgttgagggttcatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctgtaatgccttgtcattcaaattgttga 23621362  T
Q  99 gggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||| |||||||||||||||||||    
T  23621363 gggcttatgccctggaatgcttagtcattcaa 23621394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 13764200 - 13764076
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||  |||||||||||||||||||||||| |  ||||||||| ||||||||||||||||||||||| || | ||||||| ||||||||  |||||    
T  13764200 tcattcaattgttgagggcttatgccctggaatgatttgtcattcaaactgttgagggctcatgccctggattgtttatcattc-aattgttgatggctt 13764102  T
Q  105 atgccccggaatgcttagtcattcaa 130  Q
    |||||| || |||||| |||||||||    
T  13764101 atgccctggtatgctttgtcattcaa 13764076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 13764278 - 13764154
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||| ||||||||||||||||||||||||| | ||| ||||| |||  |||||||||||| |||||||| | ||||||| |||||||| ||||||    
T  13764278 tcattcaactgttgagggcttatgccctggaatgcctggtcgttcaaactgccgagggctcatgctctggaatgtttatcattc-aattgttgagggctt 13764180  T
Q  105 atgccccggaatgcttagtcattcaa 130  Q
    |||||| |||||| || |||||||||    
T  13764179 atgccctggaatgatttgtcattcaa 13764154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 118
Target Start/End: Complemental strand, 13764356 - 13764244
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||  ||||| ||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||| | ||||||| || ||||| ||||||    
T  13764356 tcattcaattgttgatggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgtttatcattc-aactgttgagggctt 13764258  T
Q  105 atgccccggaatgc 118  Q
    |||||| |||||||    
T  13764257 atgccctggaatgc 13764244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 8522686 - 8522575
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||| |||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| |||||    
T  8522686 gtcattcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggct 8522588  T
Q  104 tatgccccggaat 116  Q
    ||||||| |||||    
T  8522587 tatgccctggaat 8522575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 16102148 - 16102033
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||  |  ||||||||| ||||| ||||| |||||| ||    
T  16102148 gttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctgg 16102050  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||| | |||||||||    
T  16102049 aatgccttgtcattcaa 16102033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 13764506 - 13764388
Alignment:
Q  12 aaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    ||||||||||||||||||||||| |||| || |||||| || ||| ||||||||||| | |||||||| | ||||||| |||||||| ||||||||||||    
T  13764506 aaccgttgagggcttatgccctgtaatgcctggtcatttaaactgctgagggctcattctctggaatgtttatcattc-aattgttgagggcttatgccc 13764408  T
Q  111 cggaatgcttagtcattcaa 130  Q
      ||||| || |||||||||    
T  13764407 tagaatgatttgtcattcaa 13764388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 131
Target Start/End: Complemental strand, 24266746 - 24266675
Alignment:
Q  61 ggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgctt-agtcattcaac 131  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||  ||||||| |||||||||||    
T  24266746 ggctcatgccctggaatgtttatcattcaaattgttgggggcttatgccccataatgcttaagtcattcaac 24266675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 29492536 - 29492458
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||||||||  ||||| ||||| |||||| ||||||    
T  29492536 ctttgtcattcaaccgttgagggctcatgccctggaatgcctcgtcattcaaattgttgggggcttatgccccggaatg 29492458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 2288234 - 2288301
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||| ||||||||||||||||||| | ||||||||| |||||||||||||| |||||||||||    
T  2288234 aaccgttgaaggcttatgccctggaatgctttgtcattcaaactgttgagggctcaagccctggaatg 2288301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 15686424 - 15686542
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatgat-catcattcaaattgttgggggcttatgcc 109  Q
    ||||||||||||||||||||||||||||||  ||||||||| | |||||||||| ||||||||||||| |   |||||| || ||||| ||||| |||||    
T  15686424 aaccgttgagggcttatgccctggaatgctatgtcattcaa-cagttgagggcttatgccctggaatgctatgtcattc-aactgttgagggctcatgcc 15686521  T
Q  110 ccggaatgcttagtcattcaa 130  Q
    | ||||||| | |||||||||    
T  15686522 ctggaatgccttgtcattcaa 15686542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23352222 - 23352145
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| |||||||||| ||||||||||||| |  ||||||||  ||||| ||||| |||||| ||||||    
T  23352222 ctttgtcattcaactgttgagggctcatgccctggaatgtttatcattcaaattgttgggggcttatgccccggaatg 23352145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 29848523 - 29848592
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgcc 70  Q
    |||||||||||||| |||||||||||||||||||||||| |  ||||||||  | ||||||||| |||||    
T  29848523 ctttgtcattcaactgttgagggcttatgccctggaatgtttatcattcaaatttttgagggcttatgcc 29848592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 12389602 - 12389543
Alignment:
Q  16 gttgagggcttatgccctg-gaatgc-tcgtcattcaatctgttgagggctcatgccctg 73  Q
    ||||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||||    
T  12389602 gttgagggcttatgccctgtgaatgccttgtcattcaaactgttgagggctcatgccctg 12389543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 16829579 - 16829508
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccc 71  Q
    |||||||||||||| |||||||||| ||||||||||||| || |||||||||  ||||| ||||| ||||||    
T  16829579 ctttgtcattcaactgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccc 16829508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 21469840 - 21469786
Alignment:
Q  18 tgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctg 73  Q
    |||||||| ||||||||||||||| |||||||||| || |||||||||||||||||    
T  21469840 tgagggctcatgccctggaatgctagtcattcaat-tggtgagggctcatgccctg 21469786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 23621225 - 23621354
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||| |||||||||  ||||||||| |||||||||||||| | | ||||||| |||||||||| |||||||||||||||  |  |||||| || |||||     
T  23621225 ctttttcattcaactattgagggctcatgccctggaatgctttgacattcaa-ctgttgagggttcatgccctggaatgctttgtcattc-aactgttga 23621322  T
Q  99 gggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||| | ||||| | |||||||||    
T  23621323 gggcttatgccctgtaatgccttgtcattcaa 23621354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 12595699 - 12595621
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| |||||||||| ||||||||||||| || |||||||||  ||||| || || ||||||| |||||    
T  12595699 ctttgtcattcaactgttgagggctcatgccctggaatgccttgtcattcaaattgttggggacttatgccctagaatg 12595621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 25807000 - 25806902
Alignment:
Q  16 gttgagggcttatgccctg-gaatgc-tcgtcattcaatctgttgagggctcatgccctg-gaatgatca-tcattcaaattgttgggggcttatgccc 110  Q
    ||||||||||||||||||| |||||| | ||| ||||| || |||||||||||||||||| ||||| | | ||||||||||||||| ||||| ||||||    
T  25807000 gttgagggcttatgccctgtgaatgccttgtcgttcaaactattgagggctcatgccctgtgaatgcttaatcattcaaattgttgagggctcatgccc 25806902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Original strand, 9185963 - 9186035
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctg-gaatgctcgt-cattcaatctgttgagggctcatgccctg 73  Q
    ||||| |||||  ||||||||||||||||||| ||||||| || ||||||| | |||||||||||||||||||    
T  9185963 ttgtcgttcaattgttgagggcttatgccctgtgaatgctagttcattcaaaccgttgagggctcatgccctg 9186035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 12389575 - 12389463
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctg-gaatgctcgt-cattcaatctgttgagggctcatgccctg-gaatg-atcatcattcaaattgttg 97  Q
    ||||||||||| | |||||||||| |||||||| ||||||| || ||||||  ||||||||||||||||||||| |||||  | |||||||||||||||     
T  12389575 ttgtcattcaaactgttgagggctcatgccctgtgaatgctagttcattcagactgttgagggctcatgccctgtgaatgcttaatcattcaaattgtta 12389476  T
Q  98 ggggcttatgccc 110  Q
     ||||| ||||||    
T  12389475 agggctcatgccc 12389463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 12595762 - 12595648
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||| || |||||  |  |||||| || ||||| ||||| |||||| ||    
T  12595762 gttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggcttatgctctagaatgctttgtcattc-aactgttgagggctcatgccctgg 12595665  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||| | |||||||||    
T  12595664 aatgccttgtcattcaa 12595648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 43 - 130
Target Start/End: Complemental strand, 15538960 - 15538872
Alignment:
Q  43 gtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||  ||||||||||||||||||||| |||  |  ||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  15538960 gtcattcaaattgttgagggctcatgccctgggatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 15538872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 71
Target Start/End: Complemental strand, 16812556 - 16812488
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccc 71  Q
    ||||||||||| |||||||||| ||||||||||||| || |||||||||  ||||| ||||| ||||||    
T  16812556 tgtcattcaactgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccc 16812488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 23621201 - 23621263
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||| |||||||||||||| |  |||||||| || |||||||||||||||||||||||    
T  23621201 gttgagggctcatgccctggaatgctttttcattcaa-ctattgagggctcatgccctggaatg 23621263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 24266766 - 24266697
Alignment:
Q  2 tttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccc 71  Q
    ||||||||||||||||| | |||| ||||||||||||| |  ||||||||  ||||| ||||| ||||||    
T  24266766 tttgtcattcaaccgttaacggctcatgccctggaatgtttatcattcaaattgttgggggcttatgccc 24266697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 16804737 - 16804701
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgc 40  Q
    ||||||||||| |||||||||| ||||||||||||||    
T  16804737 tgtcattcaactgttgagggctcatgccctggaatgc 16804701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 122; Significance: 1e-62; HSPs: 65)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 26495561 - 26495409
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg--ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  26495561 tcattcaaccgttgagggcttatgccctggaattgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggct 26495462  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 156  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  26495461 tatgccccggaatgcttagtcattcaatgtgttgaaaatagtaccacgtcgta 26495409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 43120915 - 43120765
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43120915 gtcattcaaccgttgagggcttatgccctggaatgttaatcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggctt 43120816  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgt 155  Q
    |||||||||||||||||||||||||| | |||| |||||||||| ||||||    
T  43120815 atgccccggaatgcttagtcattcaatgagttgaaaatagtaccccgtcgt 43120765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 43124448 - 43124298
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  43124448 gtcattcaaccgttgagggcttatgccctggaatgttaatcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggctt 43124349  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgt 155  Q
    |||||||||||||||||||||||||| | |||| |||||||||| ||||||    
T  43124348 atgccccggaatgcttagtcattcaatgagttgaaaatagtaccccgtcgt 43124298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 6 - 151
Target Start/End: Original strand, 29325666 - 29325813
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg--ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||| ||||||   || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  29325666 tcattcaaccgttgagggcttatgccttggaattgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggct 29325765  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacg 151  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  29325766 tatgccccggaatgcttagtcattcaatgtgttgaaaatagtaccacg 29325813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 22759104 - 22759260
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    ||||||||||||| | |||||||||| ||||||||||||| |  |||||||| | ||||||||||||||||||||||||  |  ||||||||||||||||    
T  22759104 ctttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaacc-gttgagggctcatgccctggaatgccttgtcattcaaattgttgg 22759202  T
Q  99 gggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 156  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  22759203 gggcttatgccccggaatgcttagtcattcaacatgttggaaatagtaccacgtcgta 22759260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 24277647 - 24277782
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  24277647 gttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgtttatcattcaaattgttgggggcttatgccccgga 24277746  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||||| |||||||||  |||| |||| |||||||    
T  24277747 atgcttattcattcaacacgttgaaaatggtaccac 24277782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 24384566 - 24384431
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  24384566 gttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgtttatcattcaaattgttgggggcttatgccccgga 24384467  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||||| |||||||||  |||| |||| |||||||    
T  24384466 atgcttattcattcaacacgttgaaaatggtaccac 24384431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 16256365 - 16256501
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||||  ||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  16256365 gttgagggctcatgccctggaatgctttgtcattcaacc-gttgagggcttatgccctggaatgttcatcattcaaattgttgggggcttatgctccgga 16256463  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||||||||||  |||| ||||||||||||||    
T  16256464 atgcttagtcattcaacacgttgaaaatagtaccacgt 16256501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 16259959 - 16260095
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||||  ||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  16259959 gttgagggctcatgccctggaatgctttgtcattcaacc-gttgagggcttatgccctggaatgttcatcattcaaattgttgggggcttatgctccgga 16260057  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||||||||||  |||| ||||||||||||||    
T  16260058 atgcttagtcattcaacacgttgaaaatagtaccacgt 16260095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 8953030 - 8953148
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgcccc 111  Q
    |||||||||||||| ||||||| ||||| |  |||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  8953030 aaccgttgagggctcatgcccttgaatgttaatcattcaaactgttgagggctcatgccctggaatgtttatcattcaaattgttggggacttatgcccc 8953129  T
Q  112 ggaatgcttagtcattcaa 130  Q
    |||||||||||||||||||    
T  8953130 ggaatgcttagtcattcaa 8953148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 22593678 - 22593814
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||||  ||||||||| | |||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  22593678 gttgagggctcatgccctggaatgctttgtcattcaacc-gttgtgggcttatgccctggaatgttcatcattcaaattgttgggggcttatgctccgga 22593776  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||||||||||  |||| ||||||||||||||    
T  22593777 atgcttagtcattcaacacgttgaaaatagtaccacgt 22593814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 22597233 - 22597369
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||||  ||||||||| | |||| ||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  22597233 gttgagggctcatgccctggaatgctttgtcattcaacc-gttgtgggcttatgccctggaatgttcatcattcaaattgttgggggcttatgctccgga 22597331  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||||||||||  |||| ||||||||||||||    
T  22597332 atgcttagtcattcaacacgttgaaaatagtaccacgt 22597369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 22469905 - 22469776
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggg 100  Q
    ||||||||||| | |||||||||| |||||||||||||||  ||||||||| |||||||||||| |||||||| |||| | |||||||||||||||||||    
T  22469905 ttgtcattcaaactgttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctgaaatgtttatcattcaaattgttgggg 22469807  T
Q  101 gcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||||||||||||||||||||||    
T  22469806 gcttatgccccggaatgcttagtcattcaac 22469776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 22590123 - 22590259
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||||  ||||||||| | |||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||| |||||    
T  22590123 gttgagggctcatgccctggaatgctttgtcattcaacc-gttgtgggcttatgccctagaatgttcatcattcaaattgttgggggcttatgctccgga 22590221  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||||||||||  |||| ||||||||||||||    
T  22590222 atgcttagtcattcaacacgttgaaaatagtaccacgt 22590259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 22357907 - 22358027
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| |||||||||||||||  |||||||||  ||||||||||||||||||||||||| | |||||||||||||||| ||||||||||||    
T  22357907 aaccgttgagggctcatgccctggaatgctttgtcattcaaattgttgagggctcatgccctggaatgtttatcattcaaattgttgagggcttatgccc 22358006  T
Q  111 cggaatgcttagtcattcaac 131  Q
     ||||||||| ||||||||||    
T  22358007 tggaatgctttgtcattcaac 22358027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 23671605 - 23671454
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggc 102  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||||||||  |  |||||| || ||||| ||||    
T  23671605 gtcattcaaccgttgagggctcatgccctggaatgcctcgtcattcaatc-gttgagggctcatgccctggaatgccttgtcattc-aactgttgagggc 23671508  T
Q  103 ttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 156  Q
    | |||||| ||||||||||| ||||||| |||||| |||| |||||||||||||    
T  23671507 tcatgccctggaatgcttagccattcaatgtgttgaaaatggtaccacgtcgta 23671454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 27869811 - 27869926
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||| ||| |||||||||||||| | ||||||||| ||||||||| ||||||||||| |||| | |||||||||||||||||||||||||||||||||    
T  27869811 gttgagagctcatgccctggaatgccttgtcattcaaactgttgaggactcatgccctgaaatgtt-atcattcaaattgttgggggcttatgccccgga 27869909  T
Q  115 atgcttagtcattcaac 131  Q
    |||||||||||||||||    
T  27869910 atgcttagtcattcaac 27869926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 15 - 152
Target Start/End: Original strand, 26361435 - 26361574
Alignment:
Q  15 cgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccg 112  Q
    ||||||||||| |||||||| ||||||  |||||||||   ||||||||||||||||||||||||  |  ||||| ||||||||||||||||||||||||    
T  26361435 cgttgagggctcatgccctgaaatgctatgtcattcaaatcgttgagggctcatgccctggaatgccttgtcattgaaattgttgggggcttatgccccg 26361534  T
Q  113 gaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||||||||||||  |||| ||||||||||||||    
T  26361535 gaatgcttagtcattcaacccgttgaaaatagtaccacgt 26361574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 43120957 - 43120842
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggg 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| ||||||||||||| | |||||||||  ||||| ||    
T  43120957 ctttgtcattcaaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatgttaatcattcaatctgttgagg 43120859  T
Q  101 gcttatgccccggaatg 117  Q
    ||| |||||| ||||||    
T  43120858 gctcatgccctggaatg 43120842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 43124490 - 43124375
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggg 100  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| ||||||||||||| | |||||||||  ||||| ||    
T  43124490 ctttgtcattcaaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatgttaatcattcaatctgttgagg 43124392  T
Q  101 gcttatgccccggaatg 117  Q
    ||| |||||| ||||||    
T  43124391 gctcatgccctggaatg 43124375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 22759070 - 22759194
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | ||||||| ||  |||| |||||     
T  22759070 tcattcaactgttgagggcttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggctc 22759168  T
Q  105 atgccccggaatgcttagtcattcaa 130  Q
    |||||| ||||||| | |||||||||    
T  22759169 atgccctggaatgccttgtcattcaa 22759194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 16256276 - 16256402
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||| |||||||||||||| | ||||||||| | ||||||||||||||||||||||||  |  ||||||||||||||| |||||    
T  16256276 tcattcaaccgttgagggctcatgccctggaatgccttgtcattcaacc-gttgagggctcatgccctggaatgccttgtcattcaaattgttgagggct 16256374  T
Q  104 tatgccccggaatgcttagtcattcaac 131  Q
     |||||| ||||||||| ||||||||||    
T  16256375 catgccctggaatgctttgtcattcaac 16256402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 5 - 132
Target Start/End: Complemental strand, 23693234 - 23693107
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggc 102  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||| | ||||||||||||||||||||||||  || |||||| |||||||| ||||    
T  23693234 gtcattcaaccgttgagggctcatgccctggaatgcttcgtcattcaa-ccgttgagggctcatgccctggaatgcctcgtcattc-aattgttgagggc 23693137  T
Q  103 ttatgccccggaatgcttagtcattcaacg 132  Q
    | |||||| ||||||| | |||||||||||    
T  23693136 tcatgccctggaatgccttgtcattcaacg 23693107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 4397516 - 4397416
Alignment:
Q  53 ctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacg 151  Q
    ||||||||||||||||||||| ||||  |  ||||||||||| ||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||    
T  4397516 ctgttgagggctcatgccctgaaatgccttgtcattcaaattattgggggcttatgccccagaatgcttagtcattcaacccgttggaaatagtaccacg 4397417  T
Q  152 t 152  Q
    |    
T  4397416 t 4397416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 142
Target Start/End: Original strand, 22357990 - 22358118
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatc--atcattcaaattgttgggggcttatgccccg 112  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||  |   |||||||||||||||| || |||||||||      
T  22357990 gttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatatttttatcattcaaattgttgaggtcttatgcccta 22358088  T
Q  113 gaatgcttagtcattcaacgtgttggaaat 142  Q
    ||||||||||| ||||||| ||||| ||||    
T  22358089 gaatgcttagttattcaacatgttgaaaat 22358118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 131
Target Start/End: Complemental strand, 26495668 - 26495553
Alignment:
Q  15 cgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| ||||| |||||| ||    
T  26495668 cgttgagggctcatgccctggaatgctcgtcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctgg 26495570  T
Q  114 aatgcttagtcattcaac 131  Q
    |||| ||| |||||||||    
T  26495569 aatg-ttaatcattcaac 26495553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 16259877 - 16259996
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||| |  |||||||| | ||||||||||||||||||||||||  |  ||||||||||||||| ||||| ||||||    
T  16259877 aaccgttgagggctcatgccctggaatgttaatcattcaacc-gttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccc 16259975  T
Q  111 cggaatgcttagtcattcaac 131  Q
     ||||||||| ||||||||||    
T  16259976 tggaatgctttgtcattcaac 16259996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 22590041 - 22590160
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||| |  |||||||| | ||||||||||||||||||||||||  |  ||||||||||||||| ||||| ||||||    
T  22590041 aaccgttgagggctcatgccctggaatgttaatcattcaacc-gttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccc 22590139  T
Q  111 cggaatgcttagtcattcaac 131  Q
     ||||||||| ||||||||||    
T  22590140 tggaatgctttgtcattcaac 22590160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 22593596 - 22593715
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||| |  |||||||| | ||||||||||||||||||||||||  |  ||||||||||||||| ||||| ||||||    
T  22593596 aaccgttgagggctcatgccctggaatgttaatcattcaacc-gttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccc 22593694  T
Q  111 cggaatgcttagtcattcaac 131  Q
     ||||||||| ||||||||||    
T  22593695 tggaatgctttgtcattcaac 22593715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 22597151 - 22597270
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||| |  |||||||| | ||||||||||||||||||||||||  |  ||||||||||||||| ||||| ||||||    
T  22597151 aaccgttgagggctcatgccctggaatgttaatcattcaacc-gttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccc 22597249  T
Q  111 cggaatgcttagtcattcaac 131  Q
     ||||||||| ||||||||||    
T  22597250 tggaatgctttgtcattcaac 22597270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 26495640 - 26495529
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||| |||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| |||||    
T  26495640 gtcattcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggct 26495542  T
Q  104 tatgccccggaat 116  Q
    ||||||| |||||    
T  26495541 tatgccctggaat 26495529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 27869721 - 27869847
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 101  Q
    |||||||||||| |||||||||| |||||||||||||| |  |||||||| |||||||||||||||||||||||||| | ||||||| |||||||| | |    
T  27869721 ttgtcattcaactgttgagggctcatgccctggaatgctttatcattcaa-ctgttgagggctcatgccctggaatg-ttatcattctaattgttgagag 27869818  T
Q  102 cttatgccccggaatgcttagtcattcaa 130  Q
    || |||||| ||||||| | |||||||||    
T  27869819 ctcatgccctggaatgccttgtcattcaa 27869847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 29325556 - 29325674
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    ||||| |||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| ||||| ||||||    
T  29325556 aaccgctgagggctcatgccctggaatgctcgtcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccc 29325654  T
Q  111 cggaatgcttagtcattcaac 131  Q
     |||||| ||| |||||||||    
T  29325655 tggaatg-ttaatcattcaac 29325674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 29325587 - 29325673
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaa 90  Q
    |||||||||| |||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||||||| | |||||||||    
T  29325587 gtcattcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttaatcattcaa 29325673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 22759004 - 22759116
Alignment:
Q  18 tgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaat 116  Q
    |||||||  ||||||| |||||||  ||||||||| |||||||||||||||||||||||||| | ||||||| || ||||| |||||||||||| |||||    
T  22759004 tgagggcacatgccctagaatgctttgtcattcaaactgttgagggctcatgccctggaatgtttatcattc-aactgttgagggcttatgccctggaat 22759102  T
Q  117 gcttagtcattcaa 130  Q
    |||| |||||||||    
T  22759103 gctttgtcattcaa 22759116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 16256312 - 16256388
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||| ||||||||||||| || |||||||||  |||||||||||||||||||||||||    
T  16256312 ttgtcattcaaccgttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg 16256388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 131
Target Start/End: Complemental strand, 23671644 - 23671518
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggc 102  Q
    |||| |||||||||||||||| |||||||||||||| ||||||||||| | ||||||||||||||||||||||||  || |||||| ||| |||| ||||    
T  23671644 gtcagtcaaccgttgagggctcatgccctggaatgcttcgtcattcaa-ccgttgagggctcatgccctggaatgcctcgtcattc-aatcgttgagggc 23671547  T
Q  103 ttatgccccggaatgcttagtcattcaac 131  Q
    | |||||| ||||||| | ||||||||||    
T  23671546 tcatgccctggaatgccttgtcattcaac 23671518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 27869696 - 27869757
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  27869696 gttgagggcttatgccctggaatgcttgtcattcaa-ctgttgagggctcatgccctggaatg 27869757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 16259909 - 16259982
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||||||||| ||||||||||||| || |||||||||  |||||||||||||||||||||||||    
T  16259909 tcattcaaccgttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg 16259982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 22590073 - 22590146
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||||||||| ||||||||||||| || |||||||||  |||||||||||||||||||||||||    
T  22590073 tcattcaaccgttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg 22590146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 22593628 - 22593701
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||||||||| ||||||||||||| || |||||||||  |||||||||||||||||||||||||    
T  22593628 tcattcaaccgttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg 22593701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 22597183 - 22597256
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||||||||| ||||||||||||| || |||||||||  |||||||||||||||||||||||||    
T  22597183 tcattcaaccgttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg 22597256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16256389 - 16256466
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||  ||||| ||||| |||| | ||||||    
T  16256389 ctttgtcattcaaccgttgagggcttatgccctggaatgttcatcattcaaattgttgggggcttatgctccggaatg 16256466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 16259983 - 16260060
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||  ||||| ||||| |||| | ||||||    
T  16259983 ctttgtcattcaaccgttgagggcttatgccctggaatgttcatcattcaaattgttgggggcttatgctccggaatg 16260060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22469947 - 22469868
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||| | |||||||||| ||||||||||| | || ||||||||| ||||||||||||||||||||||||||    
T  22469947 ctttgtcattcaaactgttgagggctcatgccctggaaagccttgtcattcaaactgttgagggctcatgccctggaatg 22469868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 43120981 - 43120869
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||| | ||||||||| | |||||||||||||||||||||||| || |||||| ||  |||| |||||||||||| |||    
T  43120981 gttgagggctcatgccctggaatgctttgtcattcaa-ccgttgagggctcatgccctggaatgctcgtcattc-aaccgttgagggcttatgccctgga 43120884  T
Q  115 atgcttagtcattcaa 130  Q
    ||| ||| ||||||||    
T  43120883 atg-ttaatcattcaa 43120869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 43124514 - 43124402
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||| | ||||||||| | |||||||||||||||||||||||| || |||||| ||  |||| |||||||||||| |||    
T  43124514 gttgagggctcatgccctggaatgctttgtcattcaa-ccgttgagggctcatgccctggaatgctcgtcattc-aaccgttgagggcttatgccctgga 43124417  T
Q  115 atgcttagtcattcaa 130  Q
    ||| ||| ||||||||    
T  43124416 atg-ttaatcattcaa 43124402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22593702 - 22593779
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||| ||||||||||||||||||| || ||||||||  ||||| ||||| |||| | ||||||    
T  22593702 ctttgtcattcaaccgttgtgggcttatgccctggaatgttcatcattcaaattgttgggggcttatgctccggaatg 22593779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22597257 - 22597334
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||| ||||||||||||||||||| || ||||||||  ||||| ||||| |||| | ||||||    
T  22597257 ctttgtcattcaaccgttgtgggcttatgccctggaatgttcatcattcaaattgttgggggcttatgctccggaatg 22597334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 22759026 - 22759156
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    ||||||||||||| | |||||||||| ||||||||||||| |  |||||||| |||||||||||| |||||||||||||  |  ||||||||  |||||     
T  22759026 ctttgtcattcaaactgttgagggctcatgccctggaatgtttatcattcaa-ctgttgagggcttatgccctggaatgctttgtcattcaatctgttga 22759124  T
Q  99 gggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||| |||||| |||||| ||| |||||||||    
T  22759125 gggctcatgccctggaatg-ttaatcattcaac 22759156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 23693266 - 23693148
Alignment:
Q  12 aaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgcc 109  Q
    ||||||||||||||  |||||||||||| |||||||||||| | ||||||||||||||||||||||||  || |||||| ||  |||| ||||| |||||    
T  23693266 aaccgttgagggctcttgccctggaatgcctcgtcattcaa-ccgttgagggctcatgccctggaatgcttcgtcattc-aaccgttgagggctcatgcc 23693169  T
Q  110 ccggaatgcttagtcattcaa 130  Q
    | ||||||| | |||||||||    
T  23693168 ctggaatgcctcgtcattcaa 23693148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22469867 - 22469790
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| ||||||||||||||||||| |||| |  ||||||||  ||||| ||||| |||||| ||||||    
T  22469867 ctttgtcattcaactgttgagggcttatgccctgaaatgtttatcattcaaattgttgggggcttatgccccggaatg 22469790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22590147 - 22590224
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||| ||||||||||||| ||||| || ||||||||  ||||| ||||| |||| | ||||||    
T  22590147 ctttgtcattcaaccgttgtgggcttatgccctagaatgttcatcattcaaattgttgggggcttatgctccggaatg 22590224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 16256247 - 16256309
Alignment:
Q  15 cgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||| ||||||||||||| |  |||||||| | ||||||||||||||||||||||||    
T  16256247 cgttgagggctcatgccctggaatgttaatcattcaa-ccgttgagggctcatgccctggaatg 16256309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 127
Target Start/End: Original strand, 26361399 - 26361509
Alignment:
Q  19 gagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatgat-catcattcaaattgttgggggcttatgccccggaat 116  Q
    ||||||| |||||||||||||||  |||||||||   ||||||||||||||||||| |||| |   |||||||||| |||| ||||| |||||| |||||    
T  26361399 gagggctcatgccctggaatgctatgtcattcaaatcgttgagggctcatgccctgaaatgctatgtcattcaaatcgttgagggctcatgccctggaat 26361498  T
Q  117 gcttagtcatt 127  Q
    || | ||||||    
T  26361499 gccttgtcatt 26361509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 24277606 - 24277722
Alignment:
Q  16 gttgagggcttatgccctg-gaatgctcgt-cattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccg 112  Q
    |||||||||| |||||||| ||||||| || |||||||  ||||||||||| |||||||||||||  |  ||||||||| ||||| ||||| |||||| |    
T  24277606 gttgagggctcatgccctgtgaatgctagttcattcaaattgttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctg 24277705  T
Q  113 gaatgcttagtcattcaa 130  Q
    ||||| ||| ||||||||    
T  24277706 gaatgttta-tcattcaa 24277722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 24384607 - 24384491
Alignment:
Q  16 gttgagggcttatgccctg-gaatgctcgt-cattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccg 112  Q
    |||||||||| |||||||| ||||||| || |||||||  ||||||||||| |||||||||||||  |  ||||||||| ||||| ||||| |||||| |    
T  24384607 gttgagggctcatgccctgtgaatgctagttcattcaaattgttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctg 24384508  T
Q  113 gaatgcttagtcattcaa 130  Q
    ||||| ||| ||||||||    
T  24384507 gaatgttta-tcattcaa 24384491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 27869758 - 27869834
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||| ||||||||| |||||||||| ||||||||||||| |  |||||| |  ||||||| |||||||||||||||||    
T  27869758 ctttatcattcaactgttgagggctcatgccctggaatg-ttatcattctaattgttgagagctcatgccctggaatg 27869834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 16256248 - 16256323
Alignment:
Q  55 gttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||||||||||||||| | ||||||| ||  |||| ||||| |||||| ||||||| | ||||||||||    
T  16256248 gttgagggctcatgccctggaatgttaatcattc-aaccgttgagggctcatgccctggaatgccttgtcattcaac 16256323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 7785178 - 7785121
Alignment:
Q  16 gttgagggcttatgccctg-gaatgctcgtcattcaatctgttgagggctcatgccctg 73  Q
    ||||||||||||||||||| ||||||  ||||||||||| |||||||||| ||||||||    
T  7785178 gttgagggcttatgccctgtgaatgcaagtcattcaatc-gttgagggcttatgccctg 7785121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 23671529 - 23671491
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctggaatgct 41  Q
    |||||||||||| |||||||||| |||||||||||||||    
T  23671529 ttgtcattcaactgttgagggctcatgccctggaatgct 23671491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 131
Target Start/End: Original strand, 27869694 - 27869771
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||| ||||||||||||| |  |||||| || ||||| ||||| |||||| |||||||||  |||||||||    
T  27869694 ctgttgagggcttatgccctggaatgcttgtcattc-aactgttgagggctcatgccctggaatgctttatcattcaac 27869771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 22358014 - 22358051
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaat 38  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  22358014 ctttgtcattcaactgttgagggctcatgccctggaat 22358051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 78
Target Start/End: Complemental strand, 22470035 - 22469963
Alignment:
Q  9 ttcaaccgttgagggcttatgccctg-gaatgctcgtc--attcaatctgttgagggctcatgccctggaatg 78  Q
    ||||| |||||||||||||||||||| |||||||      |||||| ||||||||||||||||||||||||||    
T  22470035 ttcaatcgttgagggcttatgccctgtgaatgctttaactattcaaactgttgagggctcatgccctggaatg 22469963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 44
Target Start/End: Complemental strand, 7785150 - 7785110
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctg-gaatgctcgt 44  Q
    ||||||||| |||||||||||||||||||| ||||||||||    
T  7785150 gtcattcaatcgttgagggcttatgccctgtgaatgctcgt 7785110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 21239551 - 21239703
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg--ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21239551 tcattcaaccgttgagggcttatgccctggaattgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggct 21239650  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 156  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  21239651 tatgccccggaatgcttagtcattcaatgtgttgaaaatagtaccacgtcgta 21239703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 21242101 - 21242253
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg--ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  21242101 tcattcaaccgttgagggcttatgccctggaattgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggct 21242200  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 156  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  21242201 tatgccccggaatgcttagtcattcaatgtgttgaaaatagtaccacgtcgta 21242253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 31755676 - 31755525
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31755676 gtcattcaaccgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggct 31755577  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgt 155  Q
    ||||||||||||||||||||||||||  | |||| |||||||||| ||||||    
T  31755576 tatgccccggaatgcttagtcattcattgagttgaaaatagtaccccgtcgt 31755525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 28348816 - 28348671
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28348816 tcattcaactgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 28348717  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||||||||||| |||||||||||||  |||| |||| |||||||    
T  28348716 atgccccggaatgattagtcattcaacccgttgaaaatggtaccac 28348671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 28352641 - 28352496
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||| ||||| |||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28352641 tcattcaactgttgatggcttatgtcctggaatgacttgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 28352542  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||||||||||||||  |||| |||| |||||||    
T  28352541 atgccccggaatgcttagtcattcaacccgttgaaaatggtaccac 28352496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 24504418 - 24504268
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    ||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  24504418 gtcattcaaccgttgagggctcatgccctggaatgccttgtcattcaatctgttgagggctcataccctggaatgttcatcattcaaattgttgggggct 24504319  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgt 155  Q
    ||||||||||||||||||||||||||  | ||| ||||||||||| ||||||    
T  24504318 tatgccccggaatgcttagtcattcattgagtt-gaaatagtaccccgtcgt 24504268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 25036024 - 25036164
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  |||||||||| ||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||||    
T  25036024 gttgagggctcatgccctggaatgttaatcattcaatc-gttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccccgga 25036122  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccacgtcgta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  25036123 atgcttagtcattcaacgtgttggaaatagtaccacgtcgta 25036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 31503264 - 31503118
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 101  Q
    ||||||||||| | |||||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31503264 ttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttggggg 31503165  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtacc 148  Q
    |||||||| |||||||||||||||||||  | |||| ||||||||||    
T  31503164 cttatgcctcggaatgcttagtcattcattgagttgaaaatagtacc 31503118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 31505830 - 31505684
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 101  Q
    ||||||||||| | |||||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31505830 ttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttggggg 31505731  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtacc 148  Q
    |||||||| |||||||||||||||||||  | |||| ||||||||||    
T  31505730 cttatgcctcggaatgcttagtcattcattgagttgaaaatagtacc 31505684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 44620714 - 44620562
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||  |  ||||||||||||||||    
T  44620714 ctttgtcattcaactgttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgg 44620616  T
Q  99 gggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  44620615 gggcttatgccccggaatgcttagtcattcaacccgttgaaattagtaccacgt 44620562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 23374997 - 23374863
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||||  ||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  23374997 gttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgtttatcattcaaattgttgggggcttatgccccgga 23374899  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||||  |||| |||| |||||||    
T  23374898 atgcttagtcattcaacaagttgaaaatggtaccac 23374863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 41685077 - 41685215
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  |||||||||||||||||||||||||||||||    
T  41685077 gttgagggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccccgg 41685176  T
Q  114 aatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||||||  |||| || |||||||||||    
T  41685177 aatgcttagtcattcaacccgttgaaattagtaccacgt 41685215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 18 - 150
Target Start/End: Original strand, 10040234 - 10040366
Alignment:
Q  18 tgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaat 116  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  10040234 tgagggcttatgccctggaatgccttgtcattcaa-ctgttgagggctcatgcccaggaatgtttatcattcaaattgttgggggcttatgccccggaat 10040332  T
Q  117 gcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||||||||||| |  |||| |||| |||||||    
T  10040333 gcttagtcattcatcacgttgaaaatggtaccac 10040366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 53 - 156
Target Start/End: Original strand, 12628182 - 12628286
Alignment:
Q  53 ctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacg 151  Q
    ||||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  12628182 ctgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacgtgttgaaaatagtaccacg 12628281  T
Q  152 tcgta 156  Q
    |||||    
T  12628282 tcgta 12628286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 28348882 - 28348770
Alignment:
Q  18 tgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaat 116  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| | ||||||| || ||||| |||||||||||| |||||    
T  28348882 tgagggcttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctggaatgttaatcattc-aactgttgagggcttatgccctggaat 28348784  T
Q  117 gcttagtcattcaa 130  Q
    || | |||||||||    
T  28348783 gccttgtcattcaa 28348770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 31503382 - 31503254
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggg 100  Q
    ||||||||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| || |||||| ||  |||| ||    
T  31503382 ttgtcattcaatctgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgctcgtcattc-aaccgttgagg 31503284  T
Q  101 gcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||| ||||||| | |||||||||    
T  31503283 gcttatgccctggaatgccttgtcattcaa 31503254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24504460 - 24504384
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  24504460 ctttgtcattcaaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggctcatgccctggaatg 24504384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 31505948 - 31505820
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggg 100  Q
    ||||||||||| | ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| || |||||| ||  |||| ||    
T  31505948 ttgtcattcaatctgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgctcgtcattc-aaccgttgagg 31505850  T
Q  101 gcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||  ||||||| | |||||||||    
T  31505849 gcttatgccatggaatgccttgtcattcaa 31505820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 23339599 - 23339714
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  |||||||| | |||||||||| |||||||||||||  |  ||||||||||||||||||||||||||| ||||    
T  23339599 gttgagggctcatgccctggaatgttaatcattcaacc-gttgagggcttatgccctggaatgtcttgtcattcaaattgttgggggcttatgccacgga 23339697  T
Q  115 atgcttagtcattcaac 131  Q
    |||||||||||||||||    
T  23339698 atgcttagtcattcaac 23339714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 23339478 - 23339595
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||| | ||||||| || ||||| ||||||||||||    
T  23339478 aaccgttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgttaatcattc-aactgttgagggcttatgccc 23339575  T
Q  111 cggaatgcttagtcattcaa 130  Q
     ||||||| | |||||||||    
T  23339576 tggaatgccttgtcattcaa 23339595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 25035968 - 25036098
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgg 98  Q
    ||||||||||||| | |||||||||| ||||||| ||||| | ||||||||||||||||||||||||||||||||||||| | ||||||| ||| ||||     
T  25035968 ctttgtcattcaatctgttgagggctcatgccctagaatgattcgtcattcaatctgttgagggctcatgccctggaatgttaatcattc-aatcgttga 25036066  T
Q  99 gggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||| |||||| ||||||| | |||||||||    
T  25036067 gggctcatgccctggaatgccttgtcattcaa 25036098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 130
Target Start/End: Original strand, 25035942 - 25036059
Alignment:
Q  14 ccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgcccc 111  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| || ||||||||  ||||| ||||| ||||||     
T  25035942 ccgttgagggcttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctagaatgattcgtcattcaatctgttgagggctcatgccct 25036041  T
Q  112 ggaatgcttagtcattcaa 130  Q
    |||||| ||| ||||||||    
T  25036042 ggaatg-ttaatcattcaa 25036059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 21239444 - 21239559
Alignment:
Q  15 cgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| ||||| |||||| ||    
T  21239444 cgttgagggctcatgccctggaatgctcgtcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctgg 21239542  T
Q  114 aatgcttagtcattcaac 131  Q
    |||| ||| |||||||||    
T  21239543 aatg-ttaatcattcaac 21239559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 131
Target Start/End: Original strand, 21241994 - 21242109
Alignment:
Q  15 cgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| ||||| |||||| ||    
T  21241994 cgttgagggctcatgccctggaatgctcgtcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctgg 21242092  T
Q  114 aatgcttagtcattcaac 131  Q
    |||| ||| |||||||||    
T  21242093 aatg-ttaatcattcaac 21242109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 23339549 - 23339673
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| ||||||    
T  23339549 tcattcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggctt 23339647  T
Q  105 atgccccggaatgcttagtcattcaa 130  Q
    |||||| ||||||  | |||||||||    
T  23339648 atgccctggaatgtcttgtcattcaa 23339673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 58 - 131
Target Start/End: Original strand, 24275709 - 24275782
Alignment:
Q  58 gagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||| |||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24275709 gagggttcatgccctggaatgtctatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 24275782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 31755718 - 31755642
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  31755718 ctttgtcattcaaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatg 31755642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 21239472 - 21239583
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||| |||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| |||||    
T  21239472 gtcattcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggct 21239570  T
Q  104 tatgccccggaat 116  Q
    ||||||| |||||    
T  21239571 tatgccctggaat 21239583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 116
Target Start/End: Original strand, 21242022 - 21242133
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||| |||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| |||||    
T  21242022 gtcattcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggct 21242120  T
Q  104 tatgccccggaat 116  Q
    ||||||| |||||    
T  21242121 tatgccctggaat 21242133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 20591420 - 20591540
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcat--cattcaaattgttgggggcttatgc 108  Q
    |||||||||||||| || ||||| ||||||  ||||||||| | || ||||||| |||||||||||||  |||  |||||||||||||||||||||||||    
T  20591420 aaccgttgagggctcataccctgaaatgctttgtcattcaacc-gtggagggcttatgccctggaatgc-catgtcattcaaattgttgggggcttatgc 20591517  T
Q  109 cccggaatgcttagtcattcaac 131  Q
    |||||||||||||||||||||||    
T  20591518 cccggaatgcttagtcattcaac 20591540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 23339506 - 23339635
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggg 99  Q
    |||||||||||||| |||||||||| ||||||||||||| |  |||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| |    
T  23339506 ctttgtcattcaactgttgagggctcatgccctggaatgttaatcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgag 23339604  T
Q  100 ggcttatgccccggaatgcttagtcattcaac 131  Q
    |||| |||||| |||||| ||| |||||||||    
T  23339605 ggctcatgccctggaatg-ttaatcattcaac 23339635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 31503408 - 31503303
Alignment:
Q  16 gttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||  |  ||||||||  ||||| ||||| |||||| ||    
T  31503408 gttgagggcttatgccctggaatgccttgtcattcaatctgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctgg 31503309  T
Q  114 aatgct 119  Q
    ||||||    
T  31503308 aatgct 31503303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 31505974 - 31505869
Alignment:
Q  16 gttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||  |  ||||||||  ||||| ||||| |||||| ||    
T  31505974 gttgagggcttatgccctggaatgccttgtcattcaatctgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctgg 31505875  T
Q  114 aatgct 119  Q
    ||||||    
T  31505874 aatgct 31505869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 31755742 - 31755629
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||||  ||||||||| | |||||||||||||||||||||||| || |||||| ||  |||| |||||||||||| |||    
T  31755742 gttgagggctcatgccctggaatgctttgtcattcaacc-gttgagggctcatgccctggaatgctcgtcattc-aaccgttgagggcttatgccctgga 31755645  T
Q  115 atgcttagtcattcaa 130  Q
    |||| | |||||||||    
T  31755644 atgccttgtcattcaa 31755629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 24274239 - 24274354
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  |||||||| |||||||||||| ||||||| ||||   |  ||||||||||||||| ||||| |||||| |||    
T  24274239 gttgagggctcatgccctggaatgttaatcattcaa-ctgttgagggcttatgccctcgaataccttgtcattcaaattgttgagggctcatgccctgga 24274337  T
Q  115 atgcttagtcattcaac 131  Q
    |||||| ||||||||||    
T  24274338 atgctttgtcattcaac 24274354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 44620738 - 44620624
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgat-catcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||||||| ||||||||||||| |   |||||| || ||||| |||||||||||| ||    
T  44620738 gttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctatgtcattc-aactgttgagggcttatgccctgg 44620641  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||| | |||||||||    
T  44620640 aatgccttgtcattcaa 44620624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 24504484 - 24504371
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||||  ||||||||| | |||||||||||||||||||||||| || |||||| ||  |||| ||||| |||||| |||    
T  24504484 gttgagggctcatgccctggaatgctttgtcattcaacc-gttgagggctcatgccctggaatgctcgtcattc-aaccgttgagggctcatgccctgga 24504387  T
Q  115 atgcttagtcattcaa 130  Q
    |||| | |||||||||    
T  24504386 atgccttgtcattcaa 24504371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 24274267 - 24274392
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggct 103  Q
    ||||||||| |||||||||||||||||| |||| | | |||||||||  |||||||||||||||||||||||||  |  |||||| || | ||| |||||    
T  24274267 tcattcaactgttgagggcttatgccctcgaataccttgtcattcaaattgttgagggctcatgccctggaatgctttgtcattc-aactattgagggct 24274365  T
Q  104 tatgccccggaatgcttagtcattcaa 130  Q
    ||||||| ||||||| | |||||||||    
T  24274366 tatgccctggaatgccttgtcattcaa 24274392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 31518366 - 31518254
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctg-gaatgc-tcgtcattcaatctgttgagggctcatgccctg-gaatg-atcatcattcaaattgttg 97  Q
    ||||||||||| | |||||||||| |||||||| |||||| | ||||||||| ||||||||||||||||||||| |||||  | ||||||||||||||||    
T  31518366 ttgtcattcaaactgttgagggctcatgccctgtgaatgccttgtcattcaaactgttgagggctcatgccctgtgaatgcttaatcattcaaattgttg 31518267  T
Q  98 ggggcttatgccc 110  Q
     ||||| ||||||    
T  31518266 agggctcatgccc 31518254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 22109513 - 22109451
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||    
T  22109513 gttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatg 22109451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 31518393 - 31518274
Alignment:
Q  16 gttgagggcttatgccctg-gaatg-ctcgtcattcaatctgttgagggctcatgccctg-gaatg-atcatcattcaaattgttgggggcttatgcccc 111  Q
    ||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||||| |||||  |  ||||||||| ||||| ||||| ||||||     
T  31518393 gttgagggcttatgccctgtgaatgccttgtcattcaaactgttgagggctcatgccctgtgaatgccttgtcattcaaactgttgagggctcatgccct 31518294  T
Q  112 g-gaatgcttagtcattcaa 130  Q
    | ||||||||| ||||||||    
T  31518293 gtgaatgcttaatcattcaa 31518274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 20591448 - 20591526
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||| ||||||||||||||||||||| |  |||||||||  ||||| ||||| |||||| ||||||    
T  20591448 ctttgtcattcaaccgtggagggcttatgccctggaatgccatgtcattcaaattgttgggggcttatgccccggaatg 20591526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 28348860 - 28348783
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||| | |||||||||| ||||||||||||| |  |||||||| |||||||||||| |||||||||||||    
T  28348860 ctttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaa-ctgttgagggcttatgccctggaatg 28348783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Original strand, 23339627 - 23339692
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgcc 70  Q
    |||||||||||||||||||||||||||||||||| || |||||||||  ||||| ||||| |||||    
T  23339627 tcattcaaccgttgagggcttatgccctggaatgtcttgtcattcaaattgttgggggcttatgcc 23339692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 23374973 - 23374896
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| |||||||||| ||||||||||||| |  ||||||||  ||||| ||||| |||||| ||||||    
T  23374973 ctttgtcattcaactgttgagggctcatgccctggaatgtttatcattcaaattgttgggggcttatgccccggaatg 23374896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22109489 - 22109449
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgct 41  Q
    |||||||||||||| ||||||||||||||||||||||||||    
T  22109489 ctttgtcattcaactgttgagggcttatgccctggaatgct 22109449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 22109515 - 22109437
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatca-tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||| ||||||||||||| |   |||||||| | |||| |||||||||||| ||||||||||||||||||||    
T  22109515 ctgttgagggcttatgccctggaatgctttgtcattcaact-gttgagggcttatgccctggaatgcttagtcattcaac 22109437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 24274341 - 24274403
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgaggg 62  Q
    ||||||||||||||  ||||||||||||||||||||||| || |||||||||  |||||||||    
T  24274341 ctttgtcattcaactattgagggcttatgccctggaatgccttgtcattcaaattgttgaggg 24274403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 110
Target Start/End: Original strand, 24274237 - 24274293
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||||||||||||||| | ||||||| || ||||| ||||||||||||    
T  24274237 ctgttgagggctcatgccctggaatgttaatcattc-aactgttgagggcttatgccc 24274293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 41685072 - 41685153
Alignment:
Q  50 aatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||||||||||||| |||||||||||||  |  ||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  41685072 aatctgttgagggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 41685153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 28352674 - 28352634
Alignment:
Q  50 aatctgttgagggctcatgccctggaatgatcatcattcaa 90  Q
    ||||||||||||||||||||||||||||| | |||||||||    
T  28352674 aatctgttgagggctcatgccctggaatgttaatcattcaa 28352634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 10040258 - 10040333
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||| |||||||||| |||||| |||||| |  ||||||||  ||||| ||||| |||||| ||||||    
T  10040258 ttgtcattcaactgttgagggctcatgcccaggaatgtttatcattcaaattgttgggggcttatgccccggaatg 10040333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 23085405 - 23085339
Alignment:
Q  8 attcaaccgttgagggcttatgccctg-gaatgctcgt-cattcaatctgttgagggctcatgccctg 73  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||| ||||||||||||||||||||    
T  23085405 attcaactgttgagggctcatgccctgtgaatgctagttcattcaat-tgttgagggctcatgccctg 23085339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 73
Target Start/End: Complemental strand, 23085478 - 23085419
Alignment:
Q  16 gttgagggcttatgccctg-gaatgctcgt-cattcaatctgttgagggctcatgccctg 73  Q
    ||||||||||||||||||| |||||||  | ||||||| |||||||||||||||||||||    
T  23085478 gttgagggcttatgccctgtgaatgctttttcattcaaactgttgagggctcatgccctg 23085419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 73
Target Start/End: Complemental strand, 31518561 - 31518498
Alignment:
Q  12 aaccgttgagggcttatgccctg-gaatgc-tcgtcattcaatctgttgagggctcatgccctg 73  Q
    ||||||||||||||| ||||||| |||||| | |||||||||  ||||||||||||||||||||    
T  31518561 aaccgttgagggcttttgccctgtgaatgccttgtcattcaaattgttgagggctcatgccctg 31518498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 28352669 - 28352568
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  |||||||| ||||||| |||| ||| |||||||||| |  ||||||||  ||||| ||||| |||||| |||    
T  28352669 gttgagggctcatgccctggaatgttaatcattcaa-ctgttgatggcttatgtcctggaatgacttgtcattcaatctgttgagggctcatgccctgga 28352571  T
Q  115 atg 117  Q
    |||    
T  28352570 atg 28352568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 31503410 - 31503332
Alignment:
Q  53 ctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||| |||||||||||||  |  ||||||||  ||||| |||||||||||| ||||||| | |||||||||    
T  31503410 ctgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggcttatgccctggaatgccttgtcattcaa 31503332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 31505976 - 31505898
Alignment:
Q  53 ctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||| |||||||||||||  |  ||||||||  ||||| |||||||||||| ||||||| | |||||||||    
T  31505976 ctgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggcttatgccctggaatgccttgtcattcaa 31505898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 22841049 - 22840917
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctg-gaatgctcg-tcattcaatctgttgagggctcatgccctg-gaatg--atcatcattcaaattgttg 97  Q
    ||||| ||||| |||||||||||||||||||| ||||||| | |||||||| | |  |||||||||||||||| |||||   | | |||||||| |||||    
T  22841049 ttgtcgttcaatcgttgagggcttatgccctgtgaatgctagttcattcaaaccgcggagggctcatgccctgtgaatgctttaaccattcaaactgttg 22840950  T
Q  98 ggggcttatgccccggaatgcttagtcattcaa 130  Q
     ||||| |||||| | ||||| | |||||||||    
T  22840949 agggctcatgccctgtaatgccttgtcattcaa 22840917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 4e-59; HSPs: 90)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 124553 - 124704
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  124553 gtcattcaaccgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggct 124652  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgt 155  Q
    ||||||||||||||||||||||||||  | |||| |||||||||| ||||||    
T  124653 tatgccccggaatgcttagtcattcattgagttgaaaatagtaccccgtcgt 124704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 151
Target Start/End: Complemental strand, 16006015 - 16005868
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg--ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||||   || |||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||    
T  16006015 tcattcaaccgttgagggcttatgccctggaattgccttgtcattcaatctgttgggggctcatgccctggaatgttcatcattcaaattgttgggagct 16005916  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacg 151  Q
    |||||||||||||| |||||||||||| |||||| |||||||||||||    
T  16005915 tatgccccggaatgtttagtcattcaatgtgttgaaaatagtaccacg 16005868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 6 - 155
Target Start/End: Complemental strand, 8775999 - 8775848
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaa-tgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||| ||| | |||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||    
T  8775999 tcattcaaccgttgagggcttatgccctggaactgccttgtcattcaatctattgagggctcatgccctggaatgtccatcattcaaattgttgggggct 8775900  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgt 155  Q
    ||||||||||||||||||||||||||| | |||| |||||||||| ||||||    
T  8775899 tatgccccggaatgcttagtcattcaatgagttgaaaatagtaccccgtcgt 8775848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 38827912 - 38827772
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  |||||||||| ||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||||    
T  38827912 gttgagggctcatgccctggaatgttaatcattcaatc-gttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccccgga 38827814  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccacgtcgta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  38827813 atgcttagtcattcaacgtgttggaaatagtaccacgtcgta 38827772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 6 - 151
Target Start/End: Complemental strand, 4993185 - 4993038
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg--ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    ||||| |||||||||||||| ||||||||||||   || |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  4993185 tcattgaaccgttgagggctcatgccctggaattgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgtagggggct 4993086  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacg 151  Q
    ||||||  ||||||||||||||||||| |||||| |||||||||||||    
T  4993085 tatgccaaggaatgcttagtcattcaatgtgttgaaaatagtaccacg 4993038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Original strand, 21743727 - 21743873
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 101  Q
    ||||||||||| | |||||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21743727 ttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttggggg 21743826  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtacc 148  Q
    |||||||| |||||||||||||||||||  | |||| ||||||||||    
T  21743827 cttatgcctcggaatgcttagtcattcattgagttgaaaatagtacc 21743873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 13850024 - 13850173
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggg 100  Q
    ||||||||||| | |||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||    
T  13850024 ttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgtttatcattcaaattgttgggg 13850123  T
Q  101 gcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||||||||||||||||||  |||| |||| |||||||    
T  13850124 gcttatgccccggaatgcttagtcattcaacacgttgaaaatggtaccac 13850173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 48784977 - 48784825
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  ||||||||||||||||    
T  48784977 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgccttgtcattcaaattgttgg 48784879  T
Q  99 gggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  48784878 gggcttatgccccggaatgcttagtcattcaacccgttgaaattagtaccacgt 48784825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 14192134 - 14192275
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggg 99  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||| ||| |||||||| |||||| |||||| | ||||||||||||||||||    
T  14192134 ctttgtcattcaaccgttgagggcttatgccctggaatgccttgtcattcaa-ctggtgagggcttatgccccggaatgtttatcattcaaattgttggg 14192232  T
Q  100 ggcttatgccccggaatgcttagtcattcaacgtgttggaaat 142  Q
    ||||||||||||||||||| ||||||||||||  |||||||||    
T  14192233 ggcttatgccccggaatgcctagtcattcaacacgttggaaat 14192275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 13733868 - 13734017
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttggggg 101  Q
    |||||||||| ||||||||||| |||||||||||| ||  ||||||||||| ||||||||||||||||||||||||  |  |||||||||||||||||||    
T  13733868 tgtcattcaatcgttgagggctcatgccctggaatactatgtcattcaatc-gttgagggctcatgccctggaatgccttgtcattcaaattgttggggg 13733966  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||    
T  13733967 cttatgccccggaatgcttagtcattcaacccgttgaaaatagtaccacgt 13734017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 150
Target Start/End: Complemental strand, 16573219 - 16573070
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||||||| | ||||| |||||||| ||||||||| | |||||||||||||||||||    
T  16573219 ttgtcattcaacctgttgagggcttatgccctggaatgctttgtcattcaaaccgttgatggctcatgtcctggaatgtttatcattcaaattgttgggg 16573120  T
Q  101 gcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||| |||||| ||||||||||||||||||||  |||| |||| |||||||    
T  16573119 gctcatgcccaggaatgcttagtcattcaacacgttgaaaatggtaccac 16573070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 16592443 - 16592592
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggg 100  Q
    ||||||||||||| ||||||||||||||||||||||||||  ||||||||| | ||||| |||||||| ||||||||| | |||||||||||||||||||    
T  16592443 ttgtcattcaacctgttgagggcttatgccctggaatgctttgtcattcaaaccgttgatggctcatgtcctggaatgtttatcattcaaattgttgggg 16592542  T
Q  101 gcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||| |||||| ||||||||||||||||||||  |||| |||| |||||||    
T  16592543 gctcatgcccaggaatgcttagtcattcaacacgttgaaaatggtaccac 16592592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 17506164 - 17506295
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    ||||||||||||||||| |||||||||||||||||||||||  |||||||||| ||||||||||| |||||||||||||  |  ||||||||||||||||    
T  17506164 ctttgtcattcaaccgtggagggcttatgccctggaatgctttgtcattcaat-tgttgagggcttatgccctggaatgccttgtcattcaaattgttgg 17506262  T
Q  99 gggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||| |||||||||||||||||||||||    
T  17506263 gggcttatgtcccggaatgcttagtcattcaac 17506295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 17547050 - 17546919
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    ||||||||||||||||| |||||||||||||||||||||||  |||||||||| ||||||||||| |||||||||||||  |  ||||||||||||||||    
T  17547050 ctttgtcattcaaccgtggagggcttatgccctggaatgctttgtcattcaat-tgttgagggcttatgccctggaatgccttgtcattcaaattgttgg 17546952  T
Q  99 gggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||| |||||||||||||||||||||||    
T  17546951 gggcttatgtcccggaatgcttagtcattcaac 17546919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 13395897 - 13396014
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  |||||||||||||||||||||||||||||||    
T  13395897 gttgagggctcatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccccgg 13395996  T
Q  114 aatgcttagtcattcaac 131  Q
    ||||||||||||||||||    
T  13395997 aatgcttagtcattcaac 13396014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 14189381 - 14189520
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 101  Q
    ||||||||||||  |||||||||||||||||||||||||  ||||||||| | ||||| |||| ||||||||||||| | ||||||||||||||||||||    
T  14189381 ttgtcattcaacttttgagggcttatgccctggaatgctttgtcattcaacc-gttgaaggcttatgccctggaatgtttatcattcaaattgttggggg 14189479  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaat 142  Q
    |||||||||||||| || ||||||||||||  |||||||||    
T  14189480 cttatgccccggaacgcctagtcattcaacacgttggaaat 14189520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 8776148 - 8776031
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgcccc 111  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||| || ||||| ||||||||||||     
T  8776148 aaccgttgagggctcatgccctggaatgctcgccattcaatctgttgagggctcatgccctggaatgctcgtcattc-aactgttgagggcttatgccct 8776050  T
Q  112 ggaatgcttagtcattcaa 130  Q
    ||||||| | |||||||||    
T  8776049 ggaatgccttgtcattcaa 8776031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 16459031 - 16458906
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctta 105  Q
    |||||||||||||||||||||||||||||||||| |  |||||||| ||||||||| |||||||||||||||| | |||||||||| ||||| |||| ||    
T  16459031 tcattcaaccgttgagggcttatgccctggaatggttatcattcaaactgttgaggtctcatgccctggaatgttaatcattcaaactgttgagggcgta 16458932  T
Q  106 tgccccggaatgcttagtcattcaac 131  Q
    ||| | |||||||||||| |||||||    
T  16458931 tgctctggaatgcttagttattcaac 16458906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 21743690 - 21743803
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| | |||||||||  ||||| |||||    
T  21743690 gtcattcaaccgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaatctgttgagggct 21743789  T
Q  104 tatgccccggaatg 117  Q
     |||||| ||||||    
T  21743790 catgccctggaatg 21743803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 38828002 - 38827877
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggct 103  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| || ||||||||  ||||| |||||    
T  38828002 tcattcaaccgttgagggcttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctagaatgattcgtcattcaatctgttgagggct 38827903  T
Q  104 tatgccccggaatgcttagtcattcaa 130  Q
     |||||| |||||| ||| ||||||||    
T  38827902 catgccctggaatg-ttaatcattcaa 38827877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 13255541 - 13255429
Alignment:
Q  19 gagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatg 117  Q
    ||||||| |||||||||||||||  ||||||||| ||||||| |||| ||||||||||||| | ||| |||||||||||| |||||||||||||||||||    
T  13255541 gagggctcatgccctggaatgctttgtcattcaa-ctgttgaaggcttatgccctggaatgtttatctttcaaattgttgagggcttatgccccggaatg 13255443  T
Q  118 cttagtcattcaac 131  Q
    ||||||||||||||    
T  13255442 cttagtcattcaac 13255429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 13395806 - 13395933
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggggg 101  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| |||    
T  13395806 tgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattcaaattgttgaggg 13395904  T
Q  102 cttatgccccggaatgcttagtcattcaa 130  Q
    || |||||| ||||||||| |||||||||    
T  13395905 ctcatgccctggaatgctttgtcattcaa 13395933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 44 - 131
Target Start/End: Original strand, 711010 - 711097
Alignment:
Q  44 tcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||  |||||||||||||||| |||||||| | ||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  711010 tcattcaaattgttgagggctcatgcactggaatgtttatcattcaaattgttgggggcttatgccctggaatgcttagtcattcaac 711097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 13395842 - 13395973
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||  |||||||||||||||||||||||||  |  ||||||||| |||||     
T  13395842 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaaattgttgagggctcatgccctggaatgctttgtcattcaaactgttga 13395941  T
Q  99 gggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||| |||||| ||||||| | |||||||||    
T  13395942 gggctcatgccctggaatgccttgtcattcaa 13395973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 142
Target Start/End: Complemental strand, 48743369 - 48743232
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatca-tcattcaaattgttgggggct 103  Q
    ||||||||  ||||||||||||||||||||||| | | ||||||||| |||| ||||||||||||||||||||| |   ||||||| |||||||||| ||    
T  48743369 tcattcaattgttgagggcttatgccctggaatcccttgtcattcaaactgtggagggctcatgccctggaatgctttgtcattcagattgttgggg-ct 48743271  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaat 142  Q
    |||||||| ||||||||||||||||||| ||||| ||||    
T  48743270 tatgccccagaatgcttagtcattcaacatgttgaaaat 48743232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 16006203 - 16006085
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| ||||| ||||||    
T  16006203 aaccgttgagggctcatgccctggaatgctcgtcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccc 16006105  T
Q  111 cggaatgcttagtcattcaac 131  Q
     |||||| ||| |||||||||    
T  16006104 tggaatg-ttaatcattcaac 16006085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 48785055 - 48784925
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  |||||| || |||||     
T  48785055 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttga 48784958  T
Q  99 gggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||| ||||||||| ||||||||||    
T  48784957 gggcttatgccctggaatgctttgtcattcaac 48784925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 21743623 - 21743737
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| || |||||| ||  |||| |||||||||||| |||    
T  21743623 gttgagggctcatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgctcgtcattc-aaccgttgagggcttatgccctgga 21743721  T
Q  115 atgcttagtcattcaa 130  Q
    |||| | |||||||||    
T  21743722 atgccttgtcattcaa 21743737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 38827968 - 38827838
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgg 98  Q
    ||||||||||||| | |||||||||| ||||||| ||||| | ||||||||||||||||||||||||||||||||||||| | ||||||| ||| ||||     
T  38827968 ctttgtcattcaatctgttgagggctcatgccctagaatgattcgtcattcaatctgttgagggctcatgccctggaatgttaatcattc-aatcgttga 38827870  T
Q  99 gggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||| |||||| ||||||| | |||||||||    
T  38827869 gggctcatgccctggaatgccttgtcattcaa 38827838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 16006172 - 16006047
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||| |||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| |||||    
T  16006172 gtcattcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggct 16006074  T
Q  104 tatgccccggaatgcttagtcattcaa 130  Q
    ||| ||| ||||||| | |||||||||    
T  16006073 tataccctggaatgccttgtcattcaa 16006047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 124511 - 124587
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  124511 ctttgtcattcaaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatg 124587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 13849910 - 13849995
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaa 90  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| | |||||||||    
T  13849910 tcattcaactgttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgttaatcattcaa 13849995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 21065502 - 21065575
Alignment:
Q  18 tgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaa 90  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||    
T  21065502 tgagggcttatgccctggaatgctctgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaa 21065575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 131
Target Start/End: Complemental strand, 48785091 - 48784964
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggggg 101  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  |||||| || ||||| |||    
T  48785091 tgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttgaggg 48784994  T
Q  102 cttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||| ||||||||| ||||||||||    
T  48784993 cttatgccctggaatgctttgtcattcaac 48784964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 8776105 - 8775991
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| ||||| |||||| |||    
T  8776105 gttgagggctcatgccctggaatgctcgtcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctgga 8776007  T
Q  115 atgcttagtcattcaac 131  Q
    ||| ||| |||||||||    
T  8776006 atg-ttaatcattcaac 8775991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 13255819 - 13255705
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||| |||||||||||||||||||  ||||||||| |||||||||||| ||||||||||||| | ||||||||| |||||| |||||||||||| |||    
T  13255819 gttgagtgcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgtttatcattcaa-ttgttgagggcttatgccctgga 13255722  T
Q  115 atgcttagtcattcaac 131  Q
    |||||| | ||||||||    
T  13255721 atgctttggcattcaac 13255705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 115
Target Start/End: Complemental strand, 8776078 - 8775968
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||| ||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| |||||    
T  8776078 gtcattcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggct 8775980  T
Q  104 tatgccccggaa 115  Q
    ||||||| ||||    
T  8775979 tatgccctggaa 8775968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 16006093 - 16005983
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||||||||||||||||| ||||||||||| | |||||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| ||||||    
T  16006093 tcattcaaccgttgagggcttataccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggctt 16005995  T
Q  105 atgccccggaat 116  Q
    |||||| |||||    
T  16005994 atgccctggaat 16005983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 53 - 131
Target Start/End: Original strand, 47976031 - 47976109
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||| |||||||| ||||||| | |||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  47976031 ctgttgaggactcatgccttggaatgtttatcattcaaattgttgggggcttatgccccggaatgattagtaattcaac 47976109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 16573293 - 16573169
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggctt 104  Q
    ||||||||| ||||||||||||| |||||||||| |  |||||||| |||||||||||| |||||||||||||  |  ||||||||  ||||| ||||||    
T  16573293 tcattcaactgttgagggcttataccctggaatgttaatcattcaa-ctgttgagggcttatgccctggaatgtcttgtcattcaacctgttgagggctt 16573195  T
Q  105 atgccccggaatgcttagtcattcaa 130  Q
    |||||| ||||||||| |||||||||    
T  16573194 atgccctggaatgctttgtcattcaa 16573169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 16592369 - 16592493
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggctt 104  Q
    ||||||||| ||||||||||||| |||||||||| |  |||||||| |||||||||||| |||||||||||||  |  ||||||||  ||||| ||||||    
T  16592369 tcattcaactgttgagggcttataccctggaatgttaatcattcaa-ctgttgagggcttatgccctggaatgtcttgtcattcaacctgttgagggctt 16592467  T
Q  105 atgccccggaatgcttagtcattcaa 130  Q
    |||||| ||||||||| |||||||||    
T  16592468 atgccctggaatgctttgtcattcaa 16592493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 14189305 - 14189431
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggct 103  Q
    ||||||||  |||||||| |||||||||||||||||  ||||||||| |||||||||||||||||||| |||||  |  |||||||| || ||| |||||    
T  14189305 tcattcaattgttgagggattatgccctggaatgctttgtcattcaaactgttgagggctcatgccctagaatgccttgtcattcaactt-ttgagggct 14189403  T
Q  104 tatgccccggaatgcttagtcattcaac 131  Q
    ||||||| ||||||||| ||||||||||    
T  14189404 tatgccctggaatgctttgtcattcaac 14189431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 48785016 - 48784887
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  |||||| || |||||     
T  48785016 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttga 48784919  T
Q  99 gggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||| |||||| ||||||| | |||||||||    
T  48784918 gggctcatgccctggaatgccttgtcattcaa 48784887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 11660874 - 11660763
Alignment:
Q  19 gagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatg 117  Q
    ||||||| |||||||||||||||  |||||||||| ||||||| ||| ||||||||||||| | ||||||||| |||||  |||||||||||| ||||||    
T  11660874 gagggctcatgccctggaatgctttgtcattcaat-tgttgagagcttatgccctggaatgtttatcattcaa-ttgtttagggcttatgccctggaatg 11660777  T
Q  118 cttagtcattcaac 131  Q
     |||||||||||||    
T  11660776 tttagtcattcaac 11660763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13255795 - 13255719
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| |||||||||||||||||||||||| |  ||||||||| ||||||||||| |||||||||||||    
T  13255795 ctttgtcattcaactgttgagggcttatgccctggaatgtttatcattcaat-tgttgagggcttatgccctggaatg 13255719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 48785118 - 48785003
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||  |  |||||| || ||||| |||||||||||| ||    
T  48785118 gttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttgagggcttatgccctgg 48785021  T
Q  114 aatgcttagtcattcaac 131  Q
    ||||||| ||||||||||    
T  48785020 aatgctttgtcattcaac 48785003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 13395779 - 13395893
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||  |  |||||| || ||||| |||||||||||| ||    
T  13395779 gttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttgagggcttatgccctgg 13395876  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||||| |||||||||    
T  13395877 aatgctttgtcattcaa 13395893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 124487 - 124600
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||||  ||||||||| | |||||||||||||||||||||||| || |||||| ||  |||| |||||||||||| |||    
T  124487 gttgagggctcatgccctggaatgctttgtcattcaacc-gttgagggctcatgccctggaatgctcgtcattc-aaccgttgagggcttatgccctgga 124584  T
Q  115 atgcttagtcattcaa 130  Q
    |||| | |||||||||    
T  124585 atgccttgtcattcaa 124600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 87
Target Start/End: Complemental strand, 4993263 - 4993181
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcatt 87  Q
    |||||||||| ||||||||||||||||||||||| || | |||||||  ||||||||||||||||||||||||| | ||||||    
T  4993263 tcattcaaccattgagggcttatgccctggaatgccttgccattcaaattgttgagggctcatgccctggaatgttaatcatt 4993181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 13849988 - 13850113
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggct 103  Q
    |||||||||  ||||||||||||||||| || || || ||||||||| ||||||||||||||||||||||||||  |  ||||||||| ||||| |||||    
T  13849988 tcattcaactattgagggcttatgccctagattgccttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaactgttgagggct 13850087  T
Q  104 tatgccccggaatgcttagtcattcaa 130  Q
     |||||| |||||| ||| ||||||||    
T  13850088 catgccctggaatgttta-tcattcaa 13850113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 14192072 - 14192147
Alignment:
Q  55 gttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||||||||||  |||||||| ||||||||||    
T  14192072 gttgagggctcatgccctggaatgtttatcattc-aattgttgagggcttatgccctagaatgctttgtcattcaac 14192147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 115
Target Start/End: Complemental strand, 13255752 - 13255644
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||  ||||||||||||||||||||||||| | | ||||||| |||||||||||| ||||||||||||| | ||||||| ||||| || |||||     
T  13255752 tcattcaattgttgagggcttatgccctggaatgctttggcattcaa-ctgttgagggcttatgccctggaatgtttatcattc-aattggtgagggctc 13255655  T
Q  105 atgccccggaa 115  Q
    |||||| ||||    
T  13255654 atgcccgggaa 13255644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 709608 - 709684
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||||||||||||||||| | ||||||| |||||||| |||||||||||| ||||| | | |||||||||    
T  709608 ctgttgagggctcatgccctggaatgttaatcattc-aattgttgagggcttatgccctggaattccttgtcattcaa 709684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 13849880 - 13849956
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||||||||||||||||| | ||||||| || ||||| |||||||||||| ||||||| | |||||||||    
T  13849880 ctgttgagggctcatgccctggaatgttaatcattc-aactgttgagggcttatgccctggaatgccttgtcattcaa 13849956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 137
Target Start/End: Complemental strand, 16573321 - 16573202
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaa 115  Q
    ||||| |||| ||||||||||||| |  |||||||| |||||||||||| || |||||||||| | ||||||||| | |||| |||||||||||| ||||    
T  16573321 gttgatggctcatgccctggaatgttaatcattcaa-ctgttgagggcttataccctggaatgttaatcattcaact-gttgagggcttatgccctggaa 16573224  T
Q  116 tgcttagtcattcaacgtgttg 137  Q
    ||  | |||||||||| |||||    
T  16573223 tgtcttgtcattcaacctgttg 16573202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 137
Target Start/End: Original strand, 16592341 - 16592460
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaa 115  Q
    ||||| |||| ||||||||||||| |  |||||||| |||||||||||| || |||||||||| | ||||||||| | |||| |||||||||||| ||||    
T  16592341 gttgatggctcatgccctggaatgttaatcattcaa-ctgttgagggcttataccctggaatgttaatcattcaact-gttgagggcttatgccctggaa 16592438  T
Q  116 tgcttagtcattcaacgtgttg 137  Q
    ||  | |||||||||| |||||    
T  16592439 tgtcttgtcattcaacctgttg 16592460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 17506100 - 17506177
Alignment:
Q  55 gttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||||||||||||||||||  |  ||||||||| ||||||||||||| | |||||||||||| ||||||||||    
T  17506100 gttgagggctcatgccctggaatgccttgtcattcaaaatgttgggggcttacgtcccggaatgctttgtcattcaac 17506177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 131
Target Start/End: Complemental strand, 17547114 - 17547037
Alignment:
Q  55 gttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||||||||||||||||||  |  ||||||||| ||||||||||||| | |||||||||||| ||||||||||    
T  17547114 gttgagggctcatgccctggaatgccttgtcattcaaaatgttgggggcttacgtcccggaatgctttgtcattcaac 17547037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 38828032 - 38827956
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||||||||||||||||| | ||||||| ||  |||| |||||||||||| ||||||||| |||||||||    
T  38828032 ctgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggcttatgccctggaatgctttgtcattcaa 38827956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 48743399 - 48743323
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||||||||||||||||| | ||||||| |||||||| |||||||||||| ||||| | | |||||||||    
T  48743399 ctgttgagggctcatgccctggaatgttaatcattc-aattgttgagggcttatgccctggaatcccttgtcattcaa 48743323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 13849882 - 13849996
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  |||||||| |||||||||||| |||||||||||||  |  ||||||||| ||||| ||||| |||||| |||    
T  13849882 gttgagggctcatgccctggaatgttaatcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctgga 13849980  T
Q  115 atgcttagtcattcaac 131  Q
    ||| ||| |||||||||    
T  13849981 atg-ttaatcattcaac 13849996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 709714 - 709777
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||| ||||||||||||||||||| | |||||| || ||||||||||||||||||||||||||    
T  709714 gttgatggcttatgccctggaatgccttgtcatttaaactgttgagggctcatgccctggaatg 709777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13255718 - 13255644
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaa 76  Q
    ||||| |||||||| |||||||||||||||||||||||| |  ||||||||| || ||||||||||||||| ||||    
T  13255718 ctttggcattcaactgttgagggcttatgccctggaatgtttatcattcaat-tggtgagggctcatgcccgggaa 13255644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 13407786 - 13407739
Alignment:
Q  84 cattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  13407786 cattcaaattgttgggggctcatgccccggaatgctcagtcattcaac 13407739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 14189418 - 14189493
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaa 76  Q
    |||||||||||||||||||| |||||||||||||||||| |  ||||||||  ||||| ||||| |||||| ||||    
T  14189418 ctttgtcattcaaccgttgaaggcttatgccctggaatgtttatcattcaaattgttgggggcttatgccccggaa 14189493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 4325114 - 4325016
Alignment:
Q  16 gttgagggcttatgccctg-gaatgc-tcgtcattcaatctgttgagggctcatgccctg-gaatgatca-tcattcaaattgttgggggcttatgccc 110  Q
    ||||||||||||||||||| |||||| | ||||||||| ||||||| ||||||| ||||| ||||| | | |||||||| |||||||||||||||||||    
T  4325114 gttgagggcttatgccctgtgaatgcattgtcattcaaactgttgatggctcataccctgtgaatgcttaatcattcaagttgttgggggcttatgccc 4325016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 13733841 - 13733902
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaat 77  Q
    |||||||||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||    
T  13733841 gttgagggctcatgccctggaatgctatgtcattcaatc-gttgagggctcatgccctggaat 13733902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 129
Target Start/End: Complemental strand, 48743397 - 48743284
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaat-gatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  ||||||||| ||||||||||| ||||||||||||   |  ||||||||| ||| | ||||| |||||| |||    
T  48743397 gttgagggctcatgccctggaatgttaatcattcaat-tgttgagggcttatgccctggaatcccttgtcattcaaactgtggagggctcatgccctgga 48743299  T
Q  115 atgcttagtcattca 129  Q
    |||||| ||||||||    
T  48743298 atgctttgtcattca 48743284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 11660853 - 11660777
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||  |||||| ||||||||||||||||| |  ||||||||| |||| |||||| |||||||||||||    
T  11660853 ctttgtcattcaattgttgagagcttatgccctggaatgtttatcattcaat-tgtttagggcttatgccctggaatg 11660777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13255520 - 13255443
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| ||||| |||||||||||||||||| |  || |||||  ||||||||||| |||||| ||||||    
T  13255520 ctttgtcattcaactgttgaaggcttatgccctggaatgtttatctttcaaattgttgagggcttatgccccggaatg 13255443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 15725553 - 15725457
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctg-gaatgat-catcattcaaattgttgggggcttatgccc 110  Q
    |||||||||| |||||||||||||| | ||||||||| || |||||||||||||||||| ||||| |   ||||||||||||||| ||||||||||||    
T  15725553 gttgagggctcatgccctggaatgctttgtcattcaa-cttttgagggctcatgccctgtgaatgctagttcattcaaattgttgagggcttatgccc 15725457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 14192068 - 14192186
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||| |  ||||||||| ||||||||||| ||||||| |||||  |  |||||| ||  |||| ||||||||||||    
T  14192068 aaccgttgagggctcatgccctggaatgtttatcattcaat-tgttgagggcttatgccctagaatgctttgtcattc-aaccgttgagggcttatgccc 14192165  T
Q  111 cggaatgcttagtcattcaac 131  Q
     ||||||| | ||||||||||    
T  14192166 tggaatgccttgtcattcaac 14192186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 16006121 - 16006007
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  |||||||| | |||||||||| || ||||||||||  |  ||||||||||||||| ||||| |||||| |||    
T  16006121 gttgagggctcatgccctggaatgttaatcattcaacc-gttgagggcttataccctggaatgccttgtcattcaaattgttgagggctcatgccctgga 16006023  T
Q  115 atgcttagtcattcaac 131  Q
    ||| ||| |||||||||    
T  16006022 atg-ttaatcattcaac 16006007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 14192100 - 14192223
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggct 103  Q
    ||||||||  |||||||||||||||||| |||||| | ||||||||| | |||||||||| |||||||||||||  |  |||||| || || || |||||    
T  14192100 tcattcaattgttgagggcttatgccctagaatgctttgtcattcaa-ccgttgagggcttatgccctggaatgccttgtcattc-aactggtgagggct 14192197  T
Q  104 tatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||||| ||| ||||||||    
T  14192198 tatgccccggaatgttta-tcattcaa 14192223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 35366054 - 35365977
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||||||||||||||||| | ||||||| ||  |||| ||| |||||||| ||||||| | ||||||||||    
T  35366054 ctgttgagggctcatgccctggaatgttaatcattc-aaccgttgaggggttatgccctggaatgccttgtcattcaac 35365977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 40555752 - 40555854
Alignment:
Q  12 aaccgttgagggcttatgccctg-gaatg-ctcgtcattcaatctgttgagggctcatgccctg-gaatg-atcatcattcaaattgttgggggcttatg 107  Q
    ||||||||||||||||||||||| ||||| || |||||||||  ||||||||||||||||| || |||||  | |||||||||||||||| ||| | |||    
T  40555752 aaccgttgagggcttatgccctgtgaatgccttgtcattcaaattgttgagggctcatgccttgtgaatgcttaatcattcaaattgttgagggttcatg 40555851  T
Q  108 ccc 110  Q
    |||    
T  40555852 ccc 40555854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 77
Target Start/End: Original strand, 709610 - 709670
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaat 77  Q
    |||||||||| ||||||||||||| |  ||||||||| ||||||||||| ||||||||||||    
T  709610 gttgagggctcatgccctggaatgttaatcattcaat-tgttgagggcttatgccctggaat 709670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 35366024 - 35365952
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||||||| ||||||||||||||| || ||||||||| ||| |||||||| |||| ||| ||||    
T  35366024 tcattcaaccgttgaggggttatgccctggaatgccttgtcattcaa-ctggtgagggcttatgctctgcaatg 35365952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 709638 - 709702
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaa-tgctcgtcattcaatctgttgagggctcatgc 69  Q
    ||||||||  |||||||||||||||||||||| | || |||||||||  ||||||||||||||||    
T  709638 tcattcaattgttgagggcttatgccctggaattccttgtcattcaaattgttgagggctcatgc 709702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 13865424 - 13865468
Alignment:
Q  84 cattcaaattgttgggggcttatgccccggaatgcttagtcattc 128  Q
    |||||||||||||||||||| |||| |||||||||| ||||||||    
T  13865424 cattcaaattgttgggggctcatgcgccggaatgctcagtcattc 13865468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 15689997 - 15689926
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctg-gaatgctcg-tcattcaatctgttgagggctcatgccctg 73  Q
    ||||| ||||| |||||||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||    
T  15689997 ttgtcgttcaatcgttgagggcttatgccctgtgaatgctagttcattcaa-ccgttgagggctcatgccctg 15689926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 15697590 - 15697519
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctg-gaatgctcg-tcattcaatctgttgagggctcatgccctg 73  Q
    ||||| ||||| |||||||||||||||||||| ||||||| | |||||||| | |||||||||||||||||||    
T  15697590 ttgtcgttcaatcgttgagggcttatgccctgtgaatgctagttcattcaa-ccgttgagggctcatgccctg 15697519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 131
Target Start/End: Original strand, 21735541 - 21735588
Alignment:
Q  84 cattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||| |||||||||| |||||| |||||||| |||||||||||    
T  21735541 cattcaaatcgttgggggctcatgccctggaatgctcagtcattcaac 21735588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 38828030 - 38827916
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  |||||||| | |||||||||| |||||||||||||  |  ||||||||  ||||| ||||| ||||||  ||    
T  38828030 gttgagggctcatgccctggaatgttaatcattcaa-ccgttgagggcttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctaga 38827932  T
Q  115 atgcttagtcattcaa 130  Q
    ||| || |||||||||    
T  38827931 atgattcgtcattcaa 38827916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 15725529 - 15725455
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctg-gaatgctcg-tcattcaatctgttgagggctcatgccctg 73  Q
    ||||||||||||||  ||||||||| |||||||| ||||||| | ||||||||  ||||||||||| ||||||||    
T  15725529 ctttgtcattcaacttttgagggctcatgccctgtgaatgctagttcattcaaattgttgagggcttatgccctg 15725455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 131
Target Start/End: Complemental strand, 16573322 - 16573247
Alignment:
Q  54 tgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||| |||||||||||||||||| | ||||||| || ||||| |||||||| ||| |||||| ||| |||||||||    
T  16573322 tgttgatggctcatgccctggaatgttaatcattc-aactgttgagggcttataccctggaatg-ttaatcattcaac 16573247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 54 - 131
Target Start/End: Original strand, 16592340 - 16592415
Alignment:
Q  54 tgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||| |||||||||||||||||| | ||||||| || ||||| |||||||| ||| |||||| ||| |||||||||    
T  16592340 tgttgatggctcatgccctggaatgttaatcattc-aactgttgagggcttataccctggaatg-ttaatcattcaac 16592415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 12202126 - 12202189
Alignment:
Q  11 caaccgttgagggcttatgccctg-gaatgctcg-tcattcaatctgttgagggctcatgccctg 73  Q
    |||| ||||||||||||||||||| ||||||| | |||||||||| |||||||||| ||||||||    
T  12202126 caactgttgagggcttatgccctgtgaatgctagttcattcaatc-gttgagggcttatgccctg 12202189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 130
Target Start/End: Original strand, 12757143 - 12757175
Alignment:
Q  98 ggggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||||||||||||| |||||||||||||||||    
T  12757143 ggggcttatgccccgaaatgcttagtcattcaa 12757175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 38
Target Start/End: Original strand, 21065568 - 21065600
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaat 38  Q
    |||||||||||||||||||||||||| ||||||    
T  21065568 tcattcaaccgttgagggcttatgccatggaat 21065600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 116; Significance: 4e-59; HSPs: 102)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 55503109 - 55503260
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  55503109 gtcattcaaccgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggct 55503208  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgt 155  Q
    ||||||||||||||||||||||||||  | |||| |||||||||| ||||||    
T  55503209 tatgccccggaatgcttagtcattcattgagttgaaaatagtaccccgtcgt 55503260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 56116213 - 56116358
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  56116213 tcattcaaccgttgagggcttatgccctggaatgccttgtcgttcaatctgttgagggctcatgcactggaatgatcatcattcaaattgttgggggctt 56116312  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||||||||||||||  |||| |||| |||||||    
T  56116313 atgccccggaatgcttagtcattcaacccgttgaaaatggtaccac 56116358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 155
Target Start/End: Complemental strand, 41791347 - 41791195
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg--ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  41791347 tcattcaaccgttgagggcttatgccctggaattgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggct 41791248  T
Q  104 tatg-ccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgt 155  Q
    |||| ||||||||||||||||||||||| |||||| ||| |||||||| ||||    
T  41791247 tatgcccccggaatgcttagtcattcaatgtgttgaaaacagtaccacatcgt 41791195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 6511510 - 6511370
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||| |||||||||||| | |||||||||||||||||||| ||||||||||||    
T  6511510 gttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcgtgccctggaatgtttatcattcaaattgttgggggattatgccccgga 6511411  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccacgtcgt 155  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  6511410 atgcttagtcattcaacgtgttgaaaatagtaccacgtcgt 6511370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 15242525 - 15242671
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg--ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    ||||||||| |||||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  15242525 tcattcaactgttgagggcttatgccctggaattgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggct 15242624  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||||||||||| |||  |||| |||| |||||||    
T  15242625 tatgccccggaatgcttagtcatttaacacgttgaaaatggtaccac 15242671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 10313495 - 10313340
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggg 99  Q
    ||||||||||||| | ||||||||||| ||| |||||||||| ||||||||| | |||||||||||||||||||| ||| |  |||||||||||||||||    
T  10313495 ctttgtcattcaaactgttgagggcttgtgctctggaatgcttgtcattcaacc-gttgagggctcatgccctgggatgcttgtcattcaaattgttggg 10313397  T
Q  100 ggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 156  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  10313396 ggcttatgccccggaatgcttagtcattcaatgtgttgaaaatagtaccacgtcgta 10313340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 14698395 - 14698249
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 101  Q
    ||||||||||| | |||||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  14698395 ttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttggggg 14698296  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtacc 148  Q
    |||||||| |||||||||||||||||||  | |||| ||||||||||    
T  14698295 cttatgcctcggaatgcttagtcattcattgagttgaaaatagtacc 14698249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 16359243 - 16359093
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttggggg 101  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  |||||||||||||||||||    
T  16359243 tgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaattgttggggg 16359144  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  16359143 cttatgccccggaatgcttagtcattcaacccgttgaaattagtaccacgt 16359093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 4170703 - 4170557
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 101  Q
    ||||||||||| | |||||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  4170703 ttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaatctgttgagggctcatgccctggaattttcatcattcaaattgttggggg 4170604  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtacc 148  Q
    |||||||| |||||||||||||||||||  | |||| ||||||||||    
T  4170603 cttatgcctcggaatgcttagtcattcattgagttgaaaatagtacc 4170557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 28382602 - 28382453
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttggggg 101  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  |||||||||||||||||||    
T  28382602 tgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgccttgtcattcaaattgttggggg 28382504  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  28382503 cttatgccccggaatgcttagtcattcaacccgttgaaattagtaccacgt 28382453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 15280424 - 15280573
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttggggg 101  Q
    ||||||||||| |||||||||| |||||||||||||||  ||||||||| |||||||||||||||||||||||| |  |  |||||||||||||||||||    
T  15280424 tgtcattcaactgttgagggctcatgccctggaatgctatgtcattcaa-ctgttgagggctcatgccctggaacgccttgtcattcaaattgttggggg 15280522  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||||||||    
T  15280523 cttatgccccggaatgcttagtcattcaacccgttgaaaatagtaccacgt 15280573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 150
Target Start/End: Original strand, 33684861 - 33684994
Alignment:
Q  17 ttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaa 115  Q
    |||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||  ||||    
T  33684861 ttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgtttatcattcaaattgttgggggcttatgccatggaa 33684959  T
Q  116 tgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||| ||||| |||| |||||||    
T  33684960 tgcttagtcattcaacatgttgaaaatggtaccac 33684994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 26 - 150
Target Start/End: Complemental strand, 27027652 - 27027527
Alignment:
Q  26 tatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtc 124  Q
    ||||||||||||||| | ||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  27027652 tatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgtttatcattcaaattgttgggggcttatgccccggaatgcttagtc 27027553  T
Q  125 attcaacgtgttggaaatagtaccac 150  Q
    |||||||  |||| |||| |||||||    
T  27027552 attcaacacgttgaaaatggtaccac 27027527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 16278641 - 16278772
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    ||||||||||||||||| |||||||||||||||||||||||  |||||||||| ||||||||||| |||||||||||||  |  ||||||||||||||||    
T  16278641 ctttgtcattcaaccgtggagggcttatgccctggaatgctttgtcattcaat-tgttgagggcttatgccctggaatgccttgtcattcaaattgttgg 16278739  T
Q  99 gggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||||||||||||||||||||||||    
T  16278740 gggcttatgccccggaatgcttagtcattcaac 16278772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 286868 - 286718
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatca-tcattcaaattgttggggg 101  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||| || ||||||||||||||||||||||| |   |||||||||||||||||||    
T  286868 tgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaaactattgagggctcatgccctggaatgctttgtcattcaaattgttggggg 286769  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||| ||| ||||||||||||||  |||| || |||||||||||    
T  286768 cttatgccccgaaatacttagtcattcaacccgttgaaattagtaccacgt 286718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 31117452 - 31117550
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31117452 gtcattcaaccgttgagggcttatgccctggaatgttaatcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggct 31117550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 47127140 - 47127278
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  ||||||||||||| |||||||||||||||||    
T  47127140 gttgagggcttatgccctggaatgctatgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaattgtcgggggcttatgccccgg 47127239  T
Q  114 aatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||||||  |||| || |||||||||||    
T  47127240 aatgcttagtcattcaacccgttgaaattagtaccacgt 47127278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 53388029 - 53388150
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgcc 109  Q
    |||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  || ||||||||||||||||||||||||    
T  53388029 aaccgttgagggctcatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcgttcaaattgttgggggcttatgcc 53388128  T
Q  110 ccggaatgcttagtcattcaac 131  Q
    ||||||||||||||||||||||    
T  53388129 ccggaatgcttagtcattcaac 53388150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 19 - 152
Target Start/End: Original strand, 24047832 - 24047965
Alignment:
Q  19 gagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatg 117  Q
    ||||||| |||||||||||||||  |||||||||| ||||||||||| ||||||||||||| | |||||||||||||||||||||||||||||| |||||    
T  24047832 gagggctcatgccctggaatgctttgtcattcaat-tgttgagggcttatgccctggaatgtttatcattcaaattgttgggggcttatgccccagaatg 24047930  T
Q  118 cttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||  |||| |||| || ||||||    
T  24047931 cttagtcattcaacaagttgaaaatggtgccacgt 24047965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 14698432 - 14698319
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| | |||||||||  ||||| |||||    
T  14698432 gtcattcaaccgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaatctgttgagggct 14698333  T
Q  104 tatgccccggaatg 117  Q
     |||||| ||||||    
T  14698332 catgccctggaatg 14698319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 130
Target Start/End: Original strand, 14942704 - 14942817
Alignment:
Q  17 ttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaat 116  Q
    ||||||||| ||||||| ||||| |  |||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||| || ||||    
T  14942704 ttgagggctcatgccctagaatgtttatcattcaaactgttgagggctcatgccctggaatgtttatcattcaaattgttgggggcttatgcacctgaat 14942803  T
Q  117 gcttagtcattcaa 130  Q
    ||||||||||||||    
T  14942804 gcttagtcattcaa 14942817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 4170740 - 4170628
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| | |||||||||  ||||| |||||    
T  4170740 gtcattcaaccgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaatctgttgagggct 4170641  T
Q  104 tatgccccggaat 116  Q
     |||||| |||||    
T  4170640 catgccctggaat 4170628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 15989881 - 15989756
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||  ||||||| ||||| |||| |||||||  ||||||||| || |||| |||||||||||||||||| | |||||||||||||||||||||||    
T  15989881 tcattcaattgttgaggacttataccctagaatgctttgtcattcaa-ctattgaaggctcatgccctggaatgcttatcattcaaattgttgggggctt 15989783  T
Q  105 atgccccggaatgcttagtcattcaac 131  Q
    |||||||||||||||||||||||||||    
T  15989782 atgccccggaatgcttagtcattcaac 15989756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 16278522 - 16278654
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    |||||||||||||  |||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  ||||||||| ||||||    
T  16278522 ctttgtcattcaattgttgagggctcatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaaatgttgg 16278621  T
Q  99 gggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||| || ||||||||||| ||||||||||    
T  16278622 gggcttacgctccggaatgctttgtcattcaac 16278654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 8 - 106
Target Start/End: Complemental strand, 3337072 - 3336973
Alignment:
Q  8 attcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttat 106  Q
    ||||||| ||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  3337072 attcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgtttatcattcaaattgttgggggcttat 3336973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 6511588 - 6511474
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||| | |||||||||| ||||| |||||||||||| |||    
T  6511588 gttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgtttatcattcaaactgttgagggcttatgccctgga 6511490  T
Q  115 atgcttagtcattcaa 130  Q
    |||| | |||||||||    
T  6511489 atgccttgtcattcaa 6511474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 6 - 116
Target Start/End: Original strand, 15242447 - 15242557
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||| ||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | ||||||| || ||||| ||||||    
T  15242447 tcatttaaccgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgttaatcattc-aactgttgagggctt 15242545  T
Q  105 atgccccggaat 116  Q
    |||||| |||||    
T  15242546 atgccctggaat 15242557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 127
Target Start/End: Complemental strand, 15990071 - 15989960
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||||| | ||||||| || ||||| |||||||||||| |||    
T  15990071 gttgagggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgtttatcattc-aactgttgagggcttatgccctgga 15989973  T
Q  115 atgcttagtcatt 127  Q
    |||||| ||||||    
T  15989972 atgctttgtcatt 15989960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 33848595 - 33848480
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  |||||||| | |||||||||| |||||||||||||  |  ||||||||||||||||||||||||||||||||    
T  33848595 gttgagggctcatgccctggaatgttaatcattcaacc-gttgagggcttatgccctggaatgtcttgtcattcaaattgttgggggcttatgccccgga 33848497  T
Q  115 atgcttagtcattcaac 131  Q
    |||||||||||||||||    
T  33848496 atgcttagtcattcaac 33848480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 6 - 117
Target Start/End: Original strand, 31117415 - 31117525
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctta 105  Q
    |||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| ||||||||||||| | |||||||||  ||||| ||||| |    
T  31117415 tcattcaaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatgttaatcattcaatctgttgagggctca 31117513  T
Q  106 tgccccggaatg 117  Q
    ||||| ||||||    
T  31117514 tgccctggaatg 31117525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 16278488 - 16278613
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggct 103  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||  |  ||||||||| ||||| |||||    
T  16278488 tcattcaaccgttgagggcttatgccctggaatgctttgtcattcaat-tgttgagggctcatgccctggaatgctttgtcattcaaactgttgagggct 16278586  T
Q  104 tatgccccggaatgcttagtcattcaa 130  Q
     |||||| ||||||| | |||||||||    
T  16278587 catgccctggaatgccttgtcattcaa 16278613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 14942653 - 14942777
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||| || ||||||||||||||||| ||||| | |||||||||| ||||| |||||     
T  14942653 tcattcaactgttgagggcttatgccctggaatgccttgtcattcaaactattgagggctcatgccctagaatgtttatcattcaaactgttgagggctc 14942752  T
Q  105 atgccccggaatgcttagtcattcaa 130  Q
    |||||| |||||| ||| ||||||||    
T  14942753 atgccctggaatgttta-tcattcaa 14942777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 4170807 - 4170693
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| || |||||| ||  |||| |||||||||||| |||    
T  4170807 gttgagggctcatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgctcgtcattc-aaccgttgagggcttatgccctgga 4170709  T
Q  115 atgcttagtcattcaa 130  Q
    |||| | |||||||||    
T  4170708 atgccttgtcattcaa 4170693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 9388405 - 9388534
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggg 99  Q
    |||||||||||||| |||||||||| ||||||||||||| |  |||||||| | |||||||||| |||||||||||||  |  |||||| || |||||||    
T  9388405 ctttgtcattcaactgttgagggctcatgccctggaatgttaatcattcaa-ccgttgagggcttatgccctggaatgccttgtcattc-aactgttggg 9388502  T
Q  100 ggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||||||||||||| ||||||||||||    
T  9388503 ggcttatgccccggaatgcgtagtcattcaac 9388534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 14698499 - 14698385
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| || |||||| ||  |||| |||||||||||| |||    
T  14698499 gttgagggctcatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgctcgtcattc-aaccgttgagggcttatgccctgga 14698401  T
Q  115 atgcttagtcattcaa 130  Q
    |||| | |||||||||    
T  14698400 atgccttgtcattcaa 14698385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 16278417 - 16278534
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||| | ||||||| ||  |||| ||||||||||||    
T  16278417 aaccgttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggcttatgccc 16278514  T
Q  111 cggaatgcttagtcattcaa 130  Q
     ||||||||| |||||||||    
T  16278515 tggaatgctttgtcattcaa 16278534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 33848716 - 33848599
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||| | ||||||| || ||||| ||||||||||||    
T  33848716 aaccgttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgttaatcattc-aactgttgagggcttatgccc 33848619  T
Q  111 cggaatgcttagtcattcaa 130  Q
     ||||||| | |||||||||    
T  33848618 tggaatgccttgtcattcaa 33848599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 6511629 - 6511551
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||||||||||||||||| | |||||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  6511629 ctgttgagggctcatgccctggaatgttaatcattcaaattgttgagggcttatgccctggaatgctttgtcattcaac 6511551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 15990115 - 15989995
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgcc 109  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||||||||  |  ||||||||| ||||| ||||| |||||    
T  15990115 aaccgttgagggcttatgccctggaatgcctcgtcattcaaactgttgagggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgcc 15990016  T
Q  110 ccggaatgcttagtcattcaac 131  Q
    | |||||| ||| |||||||||    
T  15990015 ctggaatgttta-tcattcaac 15989995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 31117372 - 31117498
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggg 100  Q
    ||||||||||||||||||||||||| ||||||||||||| |  |||||||| | |||||||||||||||||||||||| || |||||| ||  |||| ||    
T  31117372 ctttgtcattcaaccgttgagggctcatgccctggaatgttaatcattcaa-ccgttgagggctcatgccctggaatgctcgtcattc-aaccgttgagg 31117469  T
Q  101 gcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||| |||||| ||| ||||||||    
T  31117470 gcttatgccctggaatg-ttaatcattcaa 31117498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 33848645 - 33848521
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| ||||||    
T  33848645 tcattcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggctt 33848547  T
Q  105 atgccccggaatgcttagtcattcaa 130  Q
    |||||| ||||||  | |||||||||    
T  33848546 atgccctggaatgtcttgtcattcaa 33848521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 55503067 - 55503143
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  55503067 ctttgtcattcaaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatg 55503143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 41791426 - 41791315
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||| ||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| |||||    
T  41791426 gtcattcaaccgatgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggct 41791328  T
Q  104 tatgccccggaat 116  Q
    ||||||| |||||    
T  41791327 tatgccctggaat 41791315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 27027760 - 27027653
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 101  Q
    ||||| ||||| |||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||| |||| |  ||||||||| ||||| |||    
T  27027760 ttgtcgttcaatcgttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctgaaatgtttgtcattcaaactgttgaggg 27027661  T
Q  102 cttatgcc 109  Q
    || |||||    
T  27027660 ctcatgcc 27027653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 33848688 - 33848559
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggg 99  Q
    |||||||||||||| |||||||||| ||||||||||||| |  |||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| |    
T  33848688 ctttgtcattcaactgttgagggctcatgccctggaatgttaatcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgag 33848590  T
Q  100 ggcttatgccccggaatgcttagtcattcaac 131  Q
    |||| |||||| |||||| ||| |||||||||    
T  33848589 ggctcatgccctggaatg-ttaatcattcaac 33848559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 56115949 - 56116063
Alignment:
Q  18 tgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccggaa 115  Q
    ||||||||||||| ||||||||||  |||||||||||||||||||||||||||||||||| |  |  || ||||||||| || |||||||||||| ||||    
T  56115949 tgagggcttatgctctggaatgctttgtcattcaatctgttgagggctcatgccctggaacgccttgtcgttcaaattggtgagggcttatgccctggaa 56116048  T
Q  116 tgcttagtcattcaa 130  Q
    ||||| |||||||||    
T  56116049 tgctttgtcattcaa 56116063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 56116029 - 56116141
Alignment:
Q  18 tgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaat 116  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||| | ||||||| ||  |||| |||||||||||| | |||    
T  56116029 tgagggcttatgccctggaatgctttgtcattcaatctgttgagggcttatgccctggaatgttaatcattc-aaccgttgagggcttatgccctgtaat 56116127  T
Q  117 gcttagtcattcaa 130  Q
    | || |||||||||    
T  56116128 gatttgtcattcaa 56116141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 16359282 - 16359155
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggggg 101  Q
    ||||||||||| |||||||||| |||||||||||||||  ||||||||| |||||||||||| |||||||||||||  |  ||||||||| ||||| |||    
T  16359282 tgtcattcaactgttgagggctcatgccctggaatgctatgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattcaaactgttgaggg 16359184  T
Q  102 cttatgccccggaatgcttagtcattcaa 130  Q
    || |||||| ||||||| | |||||||||    
T  16359183 ctcatgccctggaatgccttgtcattcaa 16359155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 21190078 - 21190192
Alignment:
Q  17 ttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccggaa 115  Q
    ||||||||| ||||||||||||| |  |||||||| ||||||||||||||||||||||||||  |  ||||||||||||||| ||||| ||||||  |||    
T  21190078 ttgagggctcatgccctggaatgtttatcattcaa-ctgttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccctagaa 21190176  T
Q  116 tgcttagtcattcaac 131  Q
    ||||| ||||||||||    
T  21190177 tgcttggtcattcaac 21190192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 76
Target Start/End: Original strand, 56116095 - 56116166
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaa 76  Q
    ||||||||||||||||||||||||||||| |||| |  ||||||||||||||||||||||||||||||||||    
T  56116095 tcattcaaccgttgagggcttatgccctgtaatgatttgtcattcaatctgttgagggctcatgccctggaa 56116166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 6511564 - 6511435
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggg 99  Q
    |||||||||||||| |||||||||| ||||||||||||| |  |||||||| |||||||||||| |||||||||||||  |  ||||||||| ||||| |    
T  6511564 ctttgtcattcaactgttgagggctcatgccctggaatgtttatcattcaaactgttgagggcttatgccctggaatgccttgtcattcaaactgttgag 6511465  T
Q  100 ggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||  ||||| |||||| ||| ||||||||    
T  6511464 ggctcgtgccctggaatgttta-tcattcaa 6511435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 16278445 - 16278573
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggg 99  Q
    |||||||||||||| |||||||||| ||||||||||||| |  |||||||| | |||||||||| |||||||||||||  |  |||||| |||||||| |    
T  16278445 ctttgtcattcaactgttgagggctcatgccctggaatgttaatcattcaa-ccgttgagggcttatgccctggaatgctttgtcattc-aattgttgag 16278542  T
Q  100 ggcttatgccccggaatgcttagtcattcaa 130  Q
    |||| |||||| ||||||||| |||||||||    
T  16278543 ggctcatgccctggaatgctttgtcattcaa 16278573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 15449787 - 15449872
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaa 90  Q
    |||||||||  |||||| ||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| | |||||||||    
T  15449787 tcattcaactattgaggacttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgtttatcattcaa 15449872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 286895 - 286780
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||  |  ||||||||| | ||| ||||| |||||| ||    
T  286895 gttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattcaaactattgagggctcatgccctgg 286797  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||||| |||||||||    
T  286796 aatgctttgtcattcaa 286780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 16359309 - 16359195
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatgat-catcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| |||||||||||||||  ||||||||| |||||||||||||||||||||||||| |   |||||| || ||||| |||||||||||| ||    
T  16359309 gttgagggctcatgccctggaatgctatgtcattcaa-ctgttgagggctcatgccctggaatgctatgtcattc-aactgttgagggcttatgccctgg 16359212  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||||| |||||||||    
T  16359211 aatgctttgtcattcaa 16359195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 55503043 - 55503156
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||||  ||||||||| | |||||||||||||||||||||||| || |||||| ||  |||| |||||||||||| |||    
T  55503043 gttgagggctcatgccctggaatgctttgtcattcaacc-gttgagggctcatgccctggaatgctcgtcattc-aaccgttgagggcttatgccctgga 55503140  T
Q  115 atgcttagtcattcaa 130  Q
    |||| | |||||||||    
T  55503141 atgccttgtcattcaa 55503156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 131
Target Start/End: Original strand, 9388387 - 9388495
Alignment:
Q  22 ggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgctt 120  Q
    |||||||||| |||||||||  ||||||||| |||||||||||||||||||||||||| | ||||||| ||  |||| |||||||||||| ||||||| |    
T  9388387 ggcttatgccatggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggcttatgccctggaatgcct 9388484  T
Q  121 agtcattcaac 131  Q
     ||||||||||    
T  9388485 tgtcattcaac 9388495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 13877798 - 13877720
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||||||||| |||||||||||||||||| || |||| ||||  ||||||||||| |||||||||||||    
T  13877798 ctttgtcattcaaccgttgaaggcttatgccctggaatgccttgtcactcaaattgttgagggcttatgccctggaatg 13877720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 15448464 - 15448549
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaa 90  Q
    ||||||||  ||||||||||||||||||||||||| | ||||||||   ||||||||||||||||||||||||| | |||||||||    
T  15448464 tcattcaagtgttgagggcttatgccctggaatgccttgtcattcagattgttgagggctcatgccctggaatgttaatcattcaa 15448549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 13881481 - 13881346
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| |||| ||||||||||  ||||||||| |  ||||||||| |||||||||||||  |  ||||||||||||||| ||||||||||||  |    
T  13881481 gttgagggctcatgctctggaatgctttgtcattcaacca-ttgagggcttatgccctggaatgccttgtcattcaaattgttgagggcttatgccctag 13881383  T
Q  114 aatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    | ||||||||||||||||  |||| |||| |||||||    
T  13881382 attgcttagtcattcaacacgttgaaaattgtaccac 13881346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 13881457 - 13881385
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccct 72  Q
    ||||||||||||||| ||||||||||||||||||||||| || |||||||||  ||||||||||| |||||||    
T  13881457 ctttgtcattcaaccattgagggcttatgccctggaatgccttgtcattcaaattgttgagggcttatgccct 13881385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 41791457 - 41791339
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||| ||||| ||||||||||||| | | |||||||| |||||||||||||  |  ||||||||||||||| ||||| ||||||    
T  41791457 aaccgttgagggctcatgccttggaacgctcgtcattcaa-ccgatgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccc 41791359  T
Q  111 cggaatgcttagtcattcaac 131  Q
     |||||| ||| |||||||||    
T  41791358 tggaatg-ttaatcattcaac 41791339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 13877829 - 13877687
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    |||||||||||||||||||||||||        ||||||||  ||||||||| | ||||| |||| |||||||||||||  |  ||| |||||||||||     
T  13877829 ctttgtcattcaaccgttgagggct--------ggaatgctttgtcattcaacc-gttgaaggcttatgccctggaatgccttgtcactcaaattgttga 13877739  T
Q  99 gggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||| ||||||||||||||||||||  |||| |||| |||||||    
T  13877738 gggcttatgccctggaatgcttagtcattcaacacgttgaaaattgtaccac 13877687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 3337167 - 3337090
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||||||||||||| |||||||||| | |||||||||| ||||| ||||||||||||  |||||| | |||||||||    
T  3337167 ctgttgagggctcataccctggaatgttaatcattcaaactgttgagggcttatgccctagaatgccttgtcattcaa 3337090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 14942623 - 14942699
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||||||||||||||||| | ||||||| || ||||| |||||||||||| ||||||| | |||||||||    
T  14942623 ctgttgagggctcatgccctggaatgttaatcattc-aactgttgagggcttatgccctggaatgccttgtcattcaa 14942699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 21190105 - 21190178
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||| |||||||||| ||||||||||||| || |||||||||  ||||||||||||||||||| |||||    
T  21190105 tcattcaactgttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccctagaatg 21190178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 98 - 155
Target Start/End: Original strand, 31131813 - 31131870
Alignment:
Q  98 ggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgt 155  Q
    ||||||||||||||||||||||||||||||||| | |||| |||||||||| ||||||    
T  31131813 ggggcttatgccccggaatgcttagtcattcaatgagttgaaaatagtaccccgtcgt 31131870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 33848567 - 33848494
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||||||||||||||||||||||| || |||||||||  ||||| ||||| |||||| ||||||    
T  33848567 tcattcaaccgttgagggcttatgccctggaatgtcttgtcattcaaattgttgggggcttatgccccggaatg 33848494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 20899759 - 20899854
Alignment:
Q  55 gttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||||||||||||||||||||||  |  |||||||| | |||| |||||||||||| ||||||||||||||||||||  |||| |||| |||||||    
T  20899759 gttgagggctcatgccctggaatgccttgtcattcaact-gttgagggcttatgccctggaatgcttagtcattcaacacgttgaaaatggtaccac 20899854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 28382629 - 28382515
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||  |  |||||| || ||||| ||||| |||||| ||    
T  28382629 gttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttgagggctcatgccctgg 28382532  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||| | |||||||||    
T  28382531 aatgccttgtcattcaa 28382515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 31117348 - 31117450
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||| | ||||||||| | |||||||||||||||||||||||| | ||||||| ||  |||| ||||| |||||| |||    
T  31117348 gttgagggctcatgccctggaatgctttgtcattcaa-ccgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggctcatgccctgga 31117445  T
Q  115 atgct 119  Q
    |||||    
T  31117446 atgct 31117450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 15280397 - 15280459
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||    
T  15280397 gttgagggctcatgccctggaatgctatgtcattcaa-ctgttgagggctcatgccctggaatg 15280459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 18221149 - 18221102
Alignment:
Q  84 cattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||||    
T  18221149 cattcaaattgttgggggctcatgccccggaatgctcagtcattcaac 18221102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 20899755 - 20899821
Alignment:
Q  12 aaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| ||||||||||||| || ||||||||| |||||||||||| |||||||||||||    
T  20899755 aaccgttgagggctcatgccctggaatgccttgtcattcaa-ctgttgagggcttatgccctggaatg 20899821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 28382566 - 28382488
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| |||||||||| ||||||||||||| || |||||||||  ||||| ||||| |||||| ||||||    
T  28382566 ctttgtcattcaactgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 28382488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 56116130 - 56116247
Alignment:
Q  2 tttgtcattcaacc-gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggg 99  Q
    |||||||||||| | |||||||||| ||||||||||| || | ||| |||||  || |||||||||||||||||||||| | ||||||| ||  |||| |    
T  56116130 tttgtcattcaatctgttgagggctcatgccctggaacgccttgtcgttcaaattggtgagggctcatgccctggaatgttaatcattc-aaccgttgag 56116228  T
Q  100 ggcttatgccccggaatgc 118  Q
    ||||||||||| |||||||    
T  56116229 ggcttatgccctggaatgc 56116247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 129
Target Start/End: Original strand, 15448402 - 15448509
Alignment:
Q  20 agggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgct 119  Q
    |||||| |||| |||||||| |  ||||||||| |||||||||| |||||||| ||||| | ||||||||| | |||| |||||||||||| |||||||     
T  15448402 agggctcatgctctggaatgttaatcattcaat-tgttgagggcacatgccctagaatgttaatcattcaagt-gttgagggcttatgccctggaatgcc 15448499  T
Q  120 tagtcattca 129  Q
    | ||||||||    
T  15448500 ttgtcattca 15448509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 15990003 - 15989930
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||| ||||||||||||||||||||||||| | |||||| ||  ||||||||| | |||||||||||||    
T  15990003 tcattcaactgttgagggcttatgccctggaatgctttgtcattaaaaatgttgagggtttatgccctggaatg 15989930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 33684884 - 33684961
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| |||||||||| ||||||||||||| |  ||||||||  ||||| ||||| ||||| |||||||    
T  33684884 ctttgtcattcaactgttgagggctcatgccctggaatgtttatcattcaaattgttgggggcttatgccatggaatg 33684961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 15989921 - 15989834
Alignment:
Q  43 gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||| ||||||||||||||||| ||| |||| | ||||||| |||||||| || ||||| |||  |||||||| ||||||||||    
T  15989921 gtcattcaaactgttgagggctcatgctctgaaatgtttatcattc-aattgttgaggacttataccctagaatgctttgtcattcaac 15989834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 56116051 - 56116130
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgat 80  Q
    ||||||||||||| | |||||||||||||||||||||||| |  |||||||| | |||||||||| |||||||| ||||||    
T  56116051 ctttgtcattcaatctgttgagggcttatgccctggaatgttaatcattcaa-ccgttgagggcttatgccctgtaatgat 56116130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 6511627 - 6511565
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||| ||||||||||||| |  ||||||||  ||||||||||| |||||||||||||    
T  6511627 gttgagggctcatgccctggaatgttaatcattcaaattgttgagggcttatgccctggaatg 6511565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 8710651 - 8710553
Alignment:
Q  16 gttgagggcttatgccctg-gaatg-ctcgtcattcaatctgttgagggctcatgccctg-gaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    ||||||||||||||||||| ||||| || |||||||||  |||| ||||||||||||| | |||||  | |||||||||||||||| ||||||||||||    
T  8710651 gttgagggcttatgccctgtgaatgccttgtcattcaaattgttaagggctcatgccccgtgaatgcttaatcattcaaattgttgagggcttatgccc 8710553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 14942625 - 14942686
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||| ||||||||||||| |  |||||||| |||||||||||| |||||||||||||    
T  14942625 gttgagggctcatgccctggaatgttaatcattcaa-ctgttgagggcttatgccctggaatg 14942686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 20899785 - 20899823
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctggaatgct 41  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  20899785 ttgtcattcaactgttgagggcttatgccctggaatgct 20899823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 24047853 - 24047923
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccc 71  Q
    |||||||||||||  |||||||||||||||||||||||| |  ||||||||  ||||| ||||| ||||||    
T  24047853 ctttgtcattcaattgttgagggcttatgccctggaatgtttatcattcaaattgttgggggcttatgccc 24047923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 15242417 - 15242493
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||||||||||||||||| | ||||||  ||  |||| |||||||||||| ||||||| | |||||||||    
T  15242417 ctgttgagggctcatgccctggaatgttaatcatt-taaccgttgagggcttatgccctggaatgccttgtcattcaa 15242493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 15989847 - 15989770
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||  |||| |||| |||||||||||||||  ||||||||  ||||| ||||| |||||| ||||||    
T  15989847 ctttgtcattcaactattgaaggctcatgccctggaatgcttatcattcaaattgttgggggcttatgccccggaatg 15989770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 50 - 130
Target Start/End: Original strand, 47127135 - 47127216
Alignment:
Q  50 aatctgttgagggctcatgccctggaatgat-catcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||||||||||||| ||||||||||||| |   ||||||||| ||||| ||||| |||||| ||||||| | |||||||||    
T  47127135 aatctgttgagggcttatgccctggaatgctatgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaa 47127216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 56115971 - 56116103
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttg 97  Q
    ||||||||||||| | |||||||||| ||||||||||| | || ||| |||||  || |||||||| |||||||||||||  |  ||||||||  |||||    
T  56115971 ctttgtcattcaatctgttgagggctcatgccctggaacgccttgtcgttcaaattggtgagggcttatgccctggaatgctttgtcattcaatctgttg 56116070  T
Q  98 ggggcttatgccccggaatgcttagtcattcaac 131  Q
     |||||||||||| |||||| ||| |||||||||    
T  56116071 agggcttatgccctggaatg-ttaatcattcaac 56116103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 15449758 - 15449833
Alignment:
Q  54 tgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||||||||||||||||||||||| | ||||||| || | ||| || ||||||||| ||||||| | |||||||||    
T  15449758 tgttgagggctcatgccctggaatgttaatcattc-aactattgaggacttatgccctggaatgccttgtcattcaa 15449833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 10313521 - 10313443
Alignment:
Q  53 ctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||||||||||||||||||||  |  ||||||||| ||||| |||||| ||| | ||||||||| ||||||||||    
T  10313521 ctgttgagggctcatgccctggaatgctttgtcattcaaactgttgagggcttgtgctctggaatgctt-gtcattcaac 10313443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 10313519 - 10313456
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||| |||||||||||||| | ||||||||| ||||||||||||  ||| ||||||||    
T  10313519 gttgagggctcatgccctggaatgctttgtcattcaaactgttgagggcttgtgctctggaatg 10313456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 15449759 - 15449872
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  |||||||| || |||||| || |||||||||||||  |  ||||||||| ||||| ||||| |||||| |||    
T  15449759 gttgagggctcatgccctggaatgttaatcattcaa-ctattgaggacttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctgga 15449857  T
Q  115 atgcttagtcattcaa 130  Q
    ||| ||| ||||||||    
T  15449858 atgttta-tcattcaa 15449872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 3337066 - 3336989
Alignment:
Q  53 ctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||| |||||||||||||  |  ||||||||||||||| ||||| |||||| |||||| ||| ||||||||    
T  3337066 ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttta-tcattcaa 3336989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 3337165 - 3337103
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||| || |||||||||| |  |||||||| |||||||||||| ||||||| |||||    
T  3337165 gttgagggctcataccctggaatgttaatcattcaaactgttgagggcttatgccctagaatg 3337103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 10704572 - 10704514
Alignment:
Q  54 tgttgagggctcatgccctg-gaatgatca-tcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||||||||| ||||| | | ||||||||||||||| ||||||||||||    
T  10704572 tgttgagggctcatgccctgtgaatgcttaatcattcaaattgttgagggcttatgccc 10704514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 54 - 110
Target Start/End: Complemental strand, 10918342 - 10918284
Alignment:
Q  54 tgttgagggctcatgccctg-gaatgatca-tcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||||||||| ||||| | | ||||||||||||||| ||||||||||||    
T  10918342 tgttgagggctcatgccctgtgaatgcttaatcattcaaattgttgagggcttatgccc 10918284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 50 - 119
Target Start/End: Complemental strand, 14698504 - 14698434
Alignment:
Q  50 aatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccggaatgct 119  Q
    |||||||||||||||||||||||||||||  |  ||||||||  ||||| ||||| |||||| ||||||||    
T  14698504 aatctgttgagggctcatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgct 14698434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 15242419 - 15242533
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  ||||| || | |||||||||| |||||||||||||  |  ||||||||  ||||| ||||| |||||| |||    
T  15242419 gttgagggctcatgccctggaatgttaatcatttaa-ccgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctgga 15242517  T
Q  115 atgcttagtcattcaac 131  Q
    ||| ||| |||||||||    
T  15242518 atg-ttaatcattcaac 15242533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 18079597 - 18079533
Alignment:
Q  11 caaccgttgagggcttatgccctg-gaatgctcg-tcattcaatctgttgagggctcatgccctg 73  Q
    |||| ||||||||||||||||||| ||||||| | ||||||||  ||||||| ||||||||||||    
T  18079597 caactgttgagggcttatgccctgtgaatgctagttcattcaaattgttgagtgctcatgccctg 18079533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 27027636 - 27027560
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||| | |||||||||| ||||||||||||| |  ||||||||  ||||| ||||| |||||| ||||||    
T  27027636 ttgtcattcaaactgttgagggctcatgccctggaatgtttatcattcaaattgttgggggcttatgccccggaatg 27027560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 113; Significance: 2e-57; HSPs: 93)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 10989981 - 10990125
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  10989981 tcattcaaccgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctagaatgatcatcattcaaattgttgggggctt 10990080  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtacca 149  Q
    |||||||||||||||||||||||||||  |||| |||| ||||||    
T  10990081 atgccccggaatgcttagtcattcaacccgttgaaaatggtacca 10990125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 52339110 - 52339254
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||| ||||| ||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  52339110 tcattcaactgttgatggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccatggaatgatcatcattcaaattgttgggggctt 52339209  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtacca 149  Q
    |||||||||||||||||||||||||||  |||| |||| ||||||    
T  52339210 atgccccggaatgcttagtcattcaacccgttgaaaatggtacca 52339254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 15010474 - 15010630
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    |||||||||||||| | |||||||| |||||||||||||||  ||||||||| ||||| ||||||||||||||||||||  |  ||||||||||||||||    
T  15010474 ctttgtcattcaactgctgagggctcatgccctggaatgctttgtcattcaa-ctgttcagggctcatgccctggaatgccttgtcattcaaattgttgg 15010572  T
Q  99 gggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15010573 gggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 15010630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 54973009 - 54972865
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg--ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54973009 tcattcaaccgttgagggcttatgccctggaattgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggct 54972910  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtacc 148  Q
    |||||| |||||||||||||||||||  | |||| ||||||||||    
T  54972909 tatgcctcggaatgcttagtcattcattgagttgaaaatagtacc 54972865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 54975619 - 54975475
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg--ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54975619 tcattcaaccgttgagggcttatgccctggaattgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggct 54975520  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtacc 148  Q
    |||||| |||||||||||||||||||  | |||| ||||||||||    
T  54975519 tatgcctcggaatgcttagtcattcattgagttgaaaatagtacc 54975475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 6 - 148
Target Start/End: Complemental strand, 54978229 - 54978085
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg--ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  54978229 tcattcaaccgttgagggcttatgccctggaattgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggct 54978130  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtacc 148  Q
    |||||| |||||||||||||||||||  | |||| ||||||||||    
T  54978129 tatgcctcggaatgcttagtcattcattgagttgaaaatagtacc 54978085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 603940 - 604081
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||| |    
T  603940 gttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccccag 604038  T
Q  114 aatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 156  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  604039 aatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 604081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 14037955 - 14037805
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttggggg 101  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  |||||||||||||||||||    
T  14037955 tgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaattgttggggg 14037856  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  14037855 cttatgccccggaatgcttagtcattcaacccgttgaaattagtaccacgt 14037805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 14041423 - 14041273
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttggggg 101  Q
    ||||||||||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  |||||||||||||||||||    
T  14041423 tgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaattgttggggg 14041324  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  14041323 cttatgccccggaatgcttagtcattcaacccgttgaaattagtaccacgt 14041273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 2035361 - 2035514
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||||||||  |||||||||||||||||||||||||  |  ||||||||||||||||    
T  2035361 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaaattgttgagggctcatgccctggaatgccttgtcattcaaattgttgg 2035460  T
Q  99 gggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  2035461 gggcttatgccccggaatgcttagtcattcaacccgttgaaattagtaccacgt 2035514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 2039102 - 2039255
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||||||||  |||||||||||||||||||||||||  |  ||||||||||||||||    
T  2039102 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaaattgttgagggctcatgccctggaatgccttgtcattcaaattgttgg 2039201  T
Q  99 gggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  2039202 gggcttatgccccggaatgcttagtcattcaacccgttgaaattagtaccacgt 2039255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 2042843 - 2042996
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||||||||  |||||||||||||||||||||||||  |  ||||||||||||||||    
T  2042843 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaaattgttgagggctcatgccctggaatgccttgtcattcaaattgttgg 2042942  T
Q  99 gggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  2042943 gggcttatgccccggaatgcttagtcattcaacccgttgaaattagtaccacgt 2042996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 6806047 - 6806192
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||| ||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||||||| | |||||||||| ||||||||||||    
T  6806047 tcattcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgtttatcattcaaactgttgggggctt 6806146  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||||||||||||||  |||| |||| |||||||    
T  6806147 atgccccggaatgcttagtcattcaacacgttgaaaatggtaccac 6806192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 17211221 - 17211118
Alignment:
Q  47 ttcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagta 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| |||| |||    
T  17211221 ttcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacccgttgaaaatggta 17211122  T
Q  147 ccac 150  Q
    ||||    
T  17211121 ccac 17211118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 16799500 - 16799368
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    |||||||||||||| |||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  ||||||||||||||||    
T  16799500 ctttgtcattcaactgttgagggctcatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaattgttgg 16799401  T
Q  99 gggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||| ||||||||||||||||||||    
T  16799400 gggcttatgccctggaatgcttagtcattcaac 16799368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 10554202 - 10554073
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggg 99  Q
    ||||||||||||||||||||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||||||||  |  |||||||||||||||||    
T  10554202 ctttgtcattcaaccgttgagggctcatgccctagaatgctcgtcattcaa-ccgttgagggctcatgccctggaatgctttgtcattcaaattgttggg 10554104  T
Q  100 ggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||||||||| ||||||||| |||||||||    
T  10554103 ggcttatgccctggaatgctttgtcattcaa 10554073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 14951843 - 14951983
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatca-tcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| |||||||||||||||  ||||||||| |||||||||||| ||||||||||||| |   ||||||||||||||| |||||||||||||||    
T  14951843 gttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattcaaattgttgagggcttatgccccgg 14951941  T
Q  114 aatgcttagtcattcaacgtgttggaaatagtaccacgtcgt 155  Q
    ||||||||||||||||| |||||| |||||||||||||||||    
T  14951942 aatgcttagtcattcaatgtgttgaaaatagtaccacgtcgt 14951983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 55 - 156
Target Start/End: Complemental strand, 7632010 - 7631908
Alignment:
Q  55 gttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtc 153  Q
    ||||||||||||||||||||||||  |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  7632010 gttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacatc 7631911  T
Q  154 gta 156  Q
    |||    
T  7631910 gta 7631908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 16799608 - 16799487
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgcc 109  Q
    |||||||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  |||||||||||||||||||||||||||    
T  16799608 aaccgttgagggctcatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgcc 16799509  T
Q  110 ccggaatgcttagtcattcaac 131  Q
    ||||||||||| ||||||||||    
T  16799508 ccggaatgctttgtcattcaac 16799487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 18958677 - 18958527
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctgg-aatg-atcatca-ttcaaattgtt 96  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||| ||||  |  ||| |||||||||||    
T  18958677 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaaatgccttgtcatttcaaattgtt 18958579  T
Q  97 gggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtacc 148  Q
    ||||||||||||||||||||||||||||||||| |  |||| ||||||||||    
T  18958578 gggggcttatgccccggaatgcttagtcattcagcccgttgaaaatagtacc 18958527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 23396054 - 23396173
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||| |||||||||||||||||| | |||||||||  ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  23396054 aaccgttgagcgcttatgccctggaatgccttgtcattcaaaatgttgagggctcatgccctggaatgttaatcattcaaattgttgggggcttatgccc 23396153  T
Q  111 cggaatgcttagtcattcaa 130  Q
      |||||| | |||||||||    
T  23396154 tagaatgccttgtcattcaa 23396173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 53 - 156
Target Start/End: Complemental strand, 54046542 - 54046438
Alignment:
Q  53 ctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacg 151  Q
    ||||||||||||||||||||||||||  |  |||||| |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||    
T  54046542 ctgttgagggctcatgccctggaatgccttgtcattcgaattgttgggggctcatgccccggaatgcttagtcattcaacgtgtcggaaatagtgccacg 54046443  T
Q  152 tcgta 156  Q
    |||||    
T  54046442 tcgta 54046438  T

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Target: chr3; HSP #23
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 3 - 150
Target Start/End: Original strand, 179765 - 179914
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttggg 99  Q
    ||||||||||| | |||||||||| ||||||||||||| |  ||||||||| |||||||||||| | |||||||||||  |  |||||||||||||||||    
T  179765 ttgtcattcaaactgttgagggctcatgccctggaatgatttgtcattcaa-ctgttgagggcttacgccctggaatgccttgtcattcaaattgttggg 179863  T
Q  100 ggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||||||||||||||||||||||||||||||  |||| |||| |||||||    
T  179864 ggcttatgccccggaatgcttagtcattcaacacgttgaaaatggtaccac 179914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 152
Target Start/End: Complemental strand, 39230545 - 39230409
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||  |  |||||||| | ||||||||||||||||||||    
T  39230545 gttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaact-gttgggggcttatgccccgg 39230448  T
Q  114 aatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||||||  |||| || |||||||||||    
T  39230447 aatgcttagtcattcaacccgttgaaattagtaccacgt 39230409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 1989371 - 1989476
Alignment:
Q  27 atgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtca 125  Q
    ||||||||||||| || ||||||||| |||||||||| ||||||||| ||||| | |||||||| |||||||||||||||||||| ||||||||||||||    
T  1989371 atgccctggaatgtcttgtcattcaaactgttgagggttcatgccctagaatgtttatcattcacattgttgggggcttatgccctggaatgcttagtca 1989470  T
Q  126 ttcaac 131  Q
    ||||||    
T  1989471 ttcaac 1989476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 54973132 - 54973001
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||  |  |||||||||||||||     
T  54973132 ctttgtcattcaaatgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgctctggaatgctttgtcattcaaattgttga 54973033  T
Q  99 gggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||| |||||| |||||| ||| |||||||||    
T  54973032 gggctcatgccctggaatg-ttaatcattcaac 54973001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 54975742 - 54975611
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||  |  |||||||||||||||     
T  54975742 ctttgtcattcaaatgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgctctggaatgctttgtcattcaaattgttga 54975643  T
Q  99 gggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||| |||||| |||||| ||| |||||||||    
T  54975642 gggctcatgccctggaatg-ttaatcattcaac 54975611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 54978352 - 54978221
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||  |||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||||||||  |  |||||||||||||||     
T  54978352 ctttgtcattcaaatgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgctctggaatgctttgtcattcaaattgttga 54978253  T
Q  99 gggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||| |||||| |||||| ||| |||||||||    
T  54978252 gggctcatgccctggaatg-ttaatcattcaac 54978221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 2039063 - 2039193
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  |||||||||||||||     
T  2039063 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattcaaattgttga 2039161  T
Q  99 gggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||| |||||| ||||||| | |||||||||    
T  2039162 gggctcatgccctggaatgccttgtcattcaa 2039193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 2042804 - 2042934
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  |||||||||||||||     
T  2042804 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattcaaattgttga 2042902  T
Q  99 gggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||| |||||| ||||||| | |||||||||    
T  2042903 gggctcatgccctggaatgccttgtcattcaa 2042934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 10834489 - 10834597
Alignment:
Q  43 gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacgtgttggaaat 142  Q
    |||||||||| ||||||||||| ||||||| ||||| | ||||||||||||||||||||||||||||||  |||||||||||||||||| ||||| ||||    
T  10834489 gtcattcaat-tgttgagggcttatgccctagaatgtttatcattcaaattgttgggggcttatgccccataatgcttagtcattcaacatgttgaaaat 10834587  T
Q  143 agtaccacgt 152  Q
     || ||||||    
T  10834588 ggtgccacgt 10834597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 2035325 - 2035452
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggggg 101  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| |||    
T  2035325 tgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattcaaattgttgaggg 2035423  T
Q  102 cttatgccccggaatgcttagtcattcaa 130  Q
    || |||||| ||||||| | |||||||||    
T  2035424 ctcatgccctggaatgccttgtcattcaa 2035452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 2038868 - 2038998
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  |||||| || |||||     
T  2038868 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttga 2038965  T
Q  99 gggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||| ||||||||| ||||||||||    
T  2038966 gggcttatgccctggaatgctttgtcattcaac 2038998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 2038946 - 2039076
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  |||||| || |||||     
T  2038946 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttga 2039043  T
Q  99 gggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||| ||||||||| ||||||||||    
T  2039044 gggcttatgccctggaatgctttgtcattcaac 2039076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 2042609 - 2042739
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  |||||| || |||||     
T  2042609 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttga 2042706  T
Q  99 gggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||| ||||||||| ||||||||||    
T  2042707 gggcttatgccctggaatgctttgtcattcaac 2042739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 2042687 - 2042817
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  |||||| || |||||     
T  2042687 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttga 2042784  T
Q  99 gggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||| ||||||||| ||||||||||    
T  2042785 gggcttatgccctggaatgctttgtcattcaac 2042817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 2039024 - 2039153
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  |||||| || |||||     
T  2039024 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttga 2039121  T
Q  99 gggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||| ||||||||| |||||||||    
T  2039122 gggcttatgccctggaatgctttgtcattcaa 2039153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 2042765 - 2042894
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  |||||| || |||||     
T  2042765 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttga 2042862  T
Q  99 gggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||| ||||||||| |||||||||    
T  2042863 gggcttatgccctggaatgctttgtcattcaa 2042894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 179729 - 179854
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggct 103  Q
    ||||||||| |||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||||||||| |  |||||| || ||||| |||||    
T  179729 tcattcaactgttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgatttgtcattc-aactgttgagggct 179827  T
Q  104 tatgccccggaatgcttagtcattcaa 130  Q
    || |||| ||||||| | |||||||||    
T  179828 tacgccctggaatgccttgtcattcaa 179854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 2038832 - 2038959
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggggg 101  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  |||||| || ||||| |||    
T  2038832 tgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttgaggg 2038929  T
Q  102 cttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||| ||||||||| ||||||||||    
T  2038930 cttatgccctggaatgctttgtcattcaac 2038959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 131
Target Start/End: Original strand, 2042573 - 2042700
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggggg 101  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  |||||| || ||||| |||    
T  2042573 tgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttgaggg 2042670  T
Q  102 cttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||| ||||||||| ||||||||||    
T  2042671 cttatgccctggaatgctttgtcattcaac 2042700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 130
Target Start/End: Original strand, 10989915 - 10990027
Alignment:
Q  18 tgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaat 116  Q
    ||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||| | ||||||| ||  |||| |||||||||||| |||||    
T  10989915 tgagggcttatgccctgtaatgctttgtcattcaatctgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggcttatgccctggaat 10990013  T
Q  117 gcttagtcattcaa 130  Q
    || | |||||||||    
T  10990014 gccttgtcattcaa 10990027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 23396177 - 23396311
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||| ||| |||||||||||||||||  ||||||||| || |||| | || ||||||||||||| | |||||||||||||||||||||||||||||||      
T  23396177 gttgggggattatgccctggaatgctttgtcattcaa-ctattgatgacttatgccctggaatgtttatcattcaaattgttgggggcttatgccccgat 23396275  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    || ||||||||||||||  |||| ||||||| ||||    
T  23396276 atacttagtcattcaacacgttgaaaatagtgccac 23396311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 54973198 - 54973081
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||||||  |  ||||||||| ||||| ||||||||||||    
T  54973198 aaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatgctttgtcattcaaa-tgttgagggcttatgccc 54973101  T
Q  111 cggaatgcttagtcattcaa 130  Q
     ||||||| | |||||||||    
T  54973100 tggaatgccttgtcattcaa 54973081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 54975808 - 54975691
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||||||  |  ||||||||| ||||| ||||||||||||    
T  54975808 aaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatgctttgtcattcaaa-tgttgagggcttatgccc 54975711  T
Q  111 cggaatgcttagtcattcaa 130  Q
     ||||||| | |||||||||    
T  54975710 tggaatgccttgtcattcaa 54975691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 54978418 - 54978301
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||||||  |  ||||||||| ||||| ||||||||||||    
T  54978418 aaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatgctttgtcattcaaa-tgttgagggcttatgccc 54978321  T
Q  111 cggaatgcttagtcattcaa 130  Q
     ||||||| | |||||||||    
T  54978320 tggaatgccttgtcattcaa 54978301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 90
Target Start/End: Complemental strand, 10554109 - 10554034
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaa 90  Q
    |||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| | |||||||||    
T  10554109 gttgggggcttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaa 10554034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 52338992 - 52339118
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggct 103  Q
    ||||||||| |||||||||||||||||||||||| || |||||||||  |||||||||||||||||||||||||  |  ||||||||||||||| | |||    
T  52338992 tcattcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgccttgtcattcaaattgttgagagct 52339091  T
Q  104 tatgccccggaatgcttagtcattcaac 131  Q
     |||||| | |||| ||| |||||||||    
T  52339092 catgccctgaaatg-ttaatcattcaac 52339118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 54973167 - 54973041
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggc 102  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||  ||||||||||| |||||||||||||  |  ||||||||  ||||| ||||    
T  54973167 gtcattcaaccgttgagggcttatgccctggaatgctttgtcattcaa-atgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggc 54973069  T
Q  103 ttatgccccggaatgcttagtcattcaa 130  Q
    | |||| | ||||||||| |||||||||    
T  54973068 tcatgctctggaatgctttgtcattcaa 54973041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 54975777 - 54975651
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggc 102  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||  ||||||||||| |||||||||||||  |  ||||||||  ||||| ||||    
T  54975777 gtcattcaaccgttgagggcttatgccctggaatgctttgtcattcaa-atgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggc 54975679  T
Q  103 ttatgccccggaatgcttagtcattcaa 130  Q
    | |||| | ||||||||| |||||||||    
T  54975678 tcatgctctggaatgctttgtcattcaa 54975651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 54978387 - 54978261
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggc 102  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||  ||||||||||| |||||||||||||  |  ||||||||  ||||| ||||    
T  54978387 gtcattcaaccgttgagggcttatgccctggaatgctttgtcattcaa-atgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggc 54978289  T
Q  103 ttatgccccggaatgcttagtcattcaa 130  Q
    | |||| | ||||||||| |||||||||    
T  54978288 tcatgctctggaatgctttgtcattcaa 54978261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 2038805 - 2038920
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||  |  |||||| || ||||| |||||||||||| ||    
T  2038805 gttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttgagggcttatgccctgg 2038902  T
Q  114 aatgcttagtcattcaac 131  Q
    ||||||| ||||||||||    
T  2038903 aatgctttgtcattcaac 2038920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 2042546 - 2042661
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||  |  |||||| || ||||| |||||||||||| ||    
T  2042546 gttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttgagggcttatgccctgg 2042643  T
Q  114 aatgcttagtcattcaac 131  Q
    ||||||| ||||||||||    
T  2042644 aatgctttgtcattcaac 2042661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 179697 - 179816
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||| |  |||||||| |||||||||||| |||||||||||||  |  ||||||||| ||||| ||||| ||||||    
T  179697 aaccgttgagggctcatgccctggaatgttaatcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcatgccc 179795  T
Q  111 cggaatgcttagtcattcaac 131  Q
     |||||| || ||||||||||    
T  179796 tggaatgatttgtcattcaac 179816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 2035298 - 2035412
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||  |  |||||| || ||||| |||||||||||| ||    
T  2035298 gttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttgagggcttatgccctgg 2035395  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||||| |||||||||    
T  2035396 aatgctttgtcattcaa 2035412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 6818988 - 6818901
Alignment:
Q  43 gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||| |||||||||||| ||| |||| |||| | |||||||||||||||||||||||||  |||||||| ||||||||||||||    
T  6818988 gtcattcaaactgttgagggcttatgtcctgtaatgtttatcattcaaattgttgggggcttat-acccggaattcttagtcattcaac 6818901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 14037982 - 14037867
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||  |  ||||||||| ||||| ||||| |||||| ||    
T  14037982 gttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctgg 14037884  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||| | |||||||||    
T  14037883 aatgccttgtcattcaa 14037867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 14041450 - 14041335
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||  |  ||||||||| ||||| ||||| |||||| ||    
T  14041450 gttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctgg 14041352  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||| | |||||||||    
T  14041351 aatgccttgtcattcaa 14041335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 15446461 - 15446413
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15446461 ctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 15446413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 23396098 - 23396214
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  ||||||||  ||||| ||||| ||||||| |||||  |  ||||||||||||||||||| |||||||| |||    
T  23396098 gttgagggctcatgccctggaatgttaatcattcaaattgttgggggcttatgccctagaatgccttgtcattcaaattgttgggggattatgccctgga 23396197  T
Q  115 atgcttagtcattcaac 131  Q
    |||||| ||||||||||    
T  23396198 atgctttgtcattcaac 23396214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 6806019 - 6806132
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||||  |||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| ||||| |||||| |||    
T  6806019 gttgagggctcatgccctggaatgctaatcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctgga 6806117  T
Q  115 atgcttagtcattcaa 130  Q
    ||| ||| ||||||||    
T  6806118 atgttta-tcattcaa 6806132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 131
Target Start/End: Original strand, 30206556 - 30206635
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatca-tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||| ||||||||||||| |   ||||||||||||||| |||||||||||| ||||||||||||||||||||    
T  30206556 ctgttgagggcttatgccctggaatgctttgtcattcaaattgttgagggcttatgccctggaatgcttagtcattcaac 30206635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 52338964 - 52339078
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  |||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| ||||| |||||| |||    
T  52338964 gttgagggctcatgccctggaatgttaatcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctgga 52339062  T
Q  115 atgcttagtcattcaa 130  Q
    |||| | |||||||||    
T  52339063 atgccttgtcattcaa 52339078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 14951867 - 14951945
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||  ||||||||||| |||||| ||||||    
T  14951867 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaaattgttgagggcttatgccccggaatg 14951945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 10554226 - 10554113
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||| | ||||||||| | |||||||||||||||||| ||||| || |||||| ||  |||| ||||| |||||| |||    
T  10554226 gttgagggctcatgccctggaatgctttgtcattcaa-ccgttgagggctcatgccctagaatgctcgtcattc-aaccgttgagggctcatgccctgga 10554129  T
Q  115 atgcttagtcattcaa 130  Q
    |||||| |||||||||    
T  10554128 atgctttgtcattcaa 10554113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 18958705 - 18958639
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||    
T  18958705 aaccgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatg 18958639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 54973091 - 54972977
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggg 100  Q
    ||||||||||| | |||||||||| |||| ||||||||||  |||||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| ||    
T  54973091 ttgtcattcaatctgttgagggctcatgctctggaatgctttgtcattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagg 54972993  T
Q  101 gcttatgccccggaat 116  Q
    |||||||||| |||||    
T  54972992 gcttatgccctggaat 54972977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 54975701 - 54975587
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggg 100  Q
    ||||||||||| | |||||||||| |||| ||||||||||  |||||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| ||    
T  54975701 ttgtcattcaatctgttgagggctcatgctctggaatgctttgtcattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagg 54975603  T
Q  101 gcttatgccccggaat 116  Q
    |||||||||| |||||    
T  54975602 gcttatgccctggaat 54975587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 54978311 - 54978197
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggg 100  Q
    ||||||||||| | |||||||||| |||| ||||||||||  |||||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| ||    
T  54978311 ttgtcattcaatctgttgagggctcatgctctggaatgctttgtcattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagg 54978213  T
Q  101 gcttatgccccggaat 116  Q
    |||||||||| |||||    
T  54978212 gcttatgccctggaat 54978197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 12 - 110
Target Start/End: Original strand, 3394997 - 3395099
Alignment:
Q  12 aaccgttgagggcttatgccctg-gaatg-ctcgtcattcaatctgttgagggctcatgccctg-gaatg-atcatcattcaaattgttgggggcttatg 107  Q
    ||||||||||||||||||||||| ||||| || |||||||||  |||||||||||||||||||| |||||  | |||||||||||||||| ||||| |||    
T  3394997 aaccgttgagggcttatgccctgtgaatgccttgtcattcaaattgttgagggctcatgccctgtgaatgcttaatcattcaaattgttgagggctcatg 3395096  T
Q  108 ccc 110  Q
    |||    
T  3395097 ccc 3395099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 6806017 - 6806093
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||||||||||||||||| | ||||||| || ||||| |||||||||||| ||||||| | |||||||||    
T  6806017 ctgttgagggctcatgccctggaatgctaatcattc-aactgttgagggcttatgccctggaatgccttgtcattcaa 6806093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 6819085 - 6819013
Alignment:
Q  20 agggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaa 91  Q
    |||||| |||||||||||||| | ||||||||| |||||||||||||||||||| ||||| | ||||||||||    
T  6819085 agggctcatgccctggaatgccttgtcattcaaactgttgagggctcatgccctagaatgtttatcattcaaa 6819013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 52338963 - 52339038
Alignment:
Q  54 tgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||||||||||||||||||||||| | ||||||| || ||||| |||||||||||| ||||||| | |||||||||    
T  52338963 tgttgagggctcatgccctggaatgttaatcattc-aactgttgagggcttatgccctggaatgccttgtcattcaa 52339038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 30206558 - 30206621
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||||| | |||||||||  ||||||||||| |||||||||||||    
T  30206558 gttgagggcttatgccctggaatgctttgtcattcaaattgttgagggcttatgccctggaatg 30206621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 4 - 78
Target Start/End: Complemental strand, 39230518 - 39230444
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||| |||||||||||||||||||||||| || ||||||||| |||||| ||||| |||||| ||||||    
T  39230518 tgtcattcaactgttgagggcttatgccctggaatgccttgtcattcaa-ctgttgggggcttatgccccggaatg 39230444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 14951802 - 14951918
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggg 99  Q
    |||||||||||||| ||||||||||||||||||||||||             ||||||||||||||||||||||||||  |  |||||| || ||||| |    
T  14951802 ctttgtcattcaactgttgagggcttatgccctggaatg-------------ctgttgagggctcatgccctggaatgctttgtcattc-aactgttgag 14951887  T
Q  100 ggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||||||||| ||||||||| |||||||||    
T  14951888 ggcttatgccctggaatgctttgtcattcaa 14951918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Original strand, 179804 - 179881
Alignment:
Q  2 tttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||| |||||||||||| ||||||||||| || |||||||||  ||||| ||||| |||||| ||||||    
T  179804 tttgtcattcaactgttgagggcttacgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 179881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 6819169 - 6819053
Alignment:
Q  16 gttgagggcttatgccctg-gaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||| |||||||||| |||||| | ||||||||| |||||||||||| ||||| || |||| | |||||||||| | ||  ||||| |||||| ||    
T  6819169 gttgagggattatgccctgtgaatgccttgtcattcaaactgttgagggcttatgccatgaaatgtttatcattcaaactatttagggctcatgccctgg 6819070  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||| | |||||||||    
T  6819069 aatgccttgtcattcaa 6819053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 10554085 - 10554010
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaa 76  Q
    ||||||||||||| | |||||||||| ||||||||||||| |  |||||||| | ||||||||||||||||||||||    
T  10554085 ctttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaacc-gttgagggctcatgccctggaa 10554010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 603964 - 604035
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccc 71  Q
    |||||||||||||| |||||||||| ||||||||||||| || |||||||||  ||||| ||||| ||||||    
T  603964 ctttgtcattcaactgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccc 604035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 14951774 - 14951840
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| ||||||| |||||| | ||||||||| |||||||||||| |||||||||||||    
T  14951774 aaccgttgagggctcatgcccttgaatgctttgtcattcaa-ctgttgagggcttatgccctggaatg 14951840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 15010450 - 15010512
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||| |||||||||||||| | ||||||||| ||| ||||||||||||||||||||||    
T  15010450 gttgagggctcatgccctggaatgctttgtcattcaa-ctgctgagggctcatgccctggaatg 15010512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 10989937 - 10990014
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||| | |||||||||| ||||||||||||| |  |||||||| | |||||||||| |||||||||||||    
T  10989937 ctttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaa-ccgttgagggcttatgccctggaatg 10990014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 130
Target Start/End: Original strand, 12855990 - 12856105
Alignment:
Q  19 gagggcttatgccctg-gaatgctcgt-cattcaatctgttgagggctcatgccctg-gaatgatc--atcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||||||||| ||||||| || |||||||| || ||||||||||||||||  ||||| |   | |||||||||||||| ||||| |||||| ||    
T  12855990 gagggcttatgccctgtgaatgctagttcattcaat-tggtgagggctcatgccctatgaatgctttaaccattcaaattgttgagggctcatgccctgg 12856088  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||||| |||||||||    
T  12856089 aatgctttgtcattcaa 12856105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 15232203 - 15232139
Alignment:
Q  11 caaccgttgagggcttatgccctg-gaatgctcgt-cattcaatctgttgagggctcatgccctg 73  Q
    |||| ||||||||||||||||||| ||||||| || |||||||| ||||||||||| ||||||||    
T  15232203 caactgttgagggcttatgccctgtgaatgctagttcattcaatttgttgagggcttatgccctg 15232139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 11 - 73
Target Start/End: Complemental strand, 15238071 - 15238007
Alignment:
Q  11 caaccgttgagggcttatgccctg-gaatgctcgt-cattcaatctgttgagggctcatgccctg 73  Q
    |||| ||||||||||||||||||| ||||||| || |||||||| ||||||||||| ||||||||    
T  15238071 caactgttgagggcttatgccctgtgaatgctagttcattcaatttgttgagggcttatgccctg 15238007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 55292767 - 55292807
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgct 41  Q
    ||||||||||||||||| |||||||||||||| ||||||||    
T  55292767 ctttgtcattcaaccgtggagggcttatgccccggaatgct 55292807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 131
Target Start/End: Original strand, 55292787 - 55292819
Alignment:
Q  99 gggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||||||||||||||||||||||||||    
T  55292787 gggcttatgccccggaatgcttagtcattcaac 55292819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 3395042 - 3395140
Alignment:
Q  16 gttgagggcttatgccctg-gaatgctcg-tcattcaatctgttgagggctcatgccctg-gaatga-tcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||| |||||||| |||||||   ||||||||  |||||||||||||||||||| |||||| |  ||||||||||||||| ||||| ||||||    
T  3395042 gttgagggctcatgccctgtgaatgcttaatcattcaaattgttgagggctcatgccctgtgaatgacttgtcattcaaattgttgagggctcatgccc 3395140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 17211213 - 17211151
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||| ||||||||||||| || ||||||||  ||||| ||||| |||||| ||||||    
T  17211213 gttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatg 17211151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 10016 - 9885
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctg-gaatgctcg-tcattcaatctgttgagggctcatgccctg-gaatg--atcatcattcaaattgttg 97  Q
    ||||| ||||| || ||||||||||||||||| ||||||| | ||||||||| || ||||||||||||||||| ||| |   | | | ||||||||| ||    
T  10016 ttgtcgttcaatcggtgagggcttatgccctgtgaatgctagttcattcaat-tggtgagggctcatgccctgtgaacgctttaaccgttcaaattggtg 9918  T
Q  98 ggggcttatgccccggaatgcttagtcattcaa 130  Q
     |||||||||||| ||||||| | |||||||||    
T  9917 agggcttatgccctggaatgccttgtcattcaa 9885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 10834486 - 10834555
Alignment:
Q  2 tttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccc 71  Q
    ||||||||||||  |||||||||||||||||| ||||| |  ||||||||  ||||| ||||| ||||||    
T  10834486 tttgtcattcaattgttgagggcttatgccctagaatgtttatcattcaaattgttgggggcttatgccc 10834555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 18367781 - 18367850
Alignment:
Q  43 gtcattcaatctgttgagggctcatgccctg-gaatgat-catcattcaaattgttgggggcttatgccc 110  Q
    |||||||||  |||||||||||||||||||| ||||| |  |||||||||||||||| ||||| ||||||    
T  18367781 gtcattcaaattgttgagggctcatgccctgtgaatgctaaatcattcaaattgttgcgggctcatgccc 18367850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 113; Significance: 2e-57; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 6 - 151
Target Start/End: Complemental strand, 45306989 - 45306842
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg--ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||||   || |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||    
T  45306989 tcattcaaccgttgagggcttatgccctggaattgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgtggggggct 45306890  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacg 151  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||    
T  45306889 tatgccccggaatgcttagtcattcaatgtgttgaaaatagtaccacg 45306842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 293907 - 293762
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||| |||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  293907 tcattcaactgttgagggcttatgccttggaatgccttgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 293808  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||||||||||||||  |||| |||| |||||||    
T  293807 atgccccggaatgcttagtcattcaactcgttgaaaatggtaccac 293762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 20586861 - 20586715
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 101  Q
    ||||||||||| | |||||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20586861 ttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttggggg 20586762  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtacc 148  Q
    ||||||||||||||||||||||||||||| | |||| ||||||||||    
T  20586761 cttatgccccggaatgcttagtcattcaatgagttgaaaatagtacc 20586715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 20579168 - 20579022
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 101  Q
    ||||||||||| | |||||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  20579168 ttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaatctgttgagggctcatgccctggaacgttcatcattcaaattgttggggg 20579069  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtacc 148  Q
    ||||||||||||||||||||||||||||| | |||| ||||||||||    
T  20579068 cttatgccccggaatgcttagtcattcaatgagttgaaaatagtacc 20579022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 20631058 - 20630905
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  ||||||||||||||||    
T  20631058 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaattgttgg 20630959  T
Q  99 gggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  20630958 gggcttatgccccggaatgcttagtcattcaacccgttgaaattagtaccacgt 20630905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 156
Target Start/End: Complemental strand, 24087244 - 24087103
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| ||||||| |||||||  ||||||||| ||||||||||||||||||||||||||  | ||||||||||||||||||||||||||||||||    
T  24087244 gttgagggctcatgccctagaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgccttatcattcaaattgttgggggcttatgccccgg 24087146  T
Q  114 aatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 156  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  24087145 aatgcttagtcattcaacatgttggaaatagtaccacgtcgta 24087103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 36181356 - 36181203
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||  |  ||||||||||||||||    
T  36181356 ctttgtcattcaactgttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaattgttgg 36181257  T
Q  99 gggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||||||| ||||||||||||||||||  |||| || |||||||||||    
T  36181256 gggcttatgccccgaaatgcttagtcattcaacccgttgaaattagtaccacgt 36181203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 149
Target Start/End: Original strand, 21181503 - 21181647
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| |||||| | | |||||||||||||||||||||||    
T  21181503 tcattcaactgttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcatgctctggaaggtttatcattcaaattgttgggggctt 21181602  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtacca 149  Q
    |||||||||||||||||||||||||||  |||| |||| ||||||    
T  21181603 atgccccggaatgcttagtcattcaacacgttgaaaatggtacca 21181647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 12 - 150
Target Start/End: Complemental strand, 18270319 - 18270180
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    ||||||||||||||||||||||||||||| | ||| ||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||||||||    
T  18270319 aaccgttgagggcttatgccctggaatgccttgtctttcaaactgttgagggctcatgccctggagtgtttatcattcaaattgttgggggcttatgccc 18270220  T
Q  111 cggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||||||||  |||| ||||||| ||||    
T  18270219 cggaatgcttagtcattcaacacgttgaaaatagtgccac 18270180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 12 - 150
Target Start/End: Complemental strand, 18274973 - 18274834
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    ||||||||||||||||||||||||||||| | ||| ||||| ||||||||||||||||||||||| || | |||||||||||||||||||||||||||||    
T  18274973 aaccgttgagggcttatgccctggaatgccttgtctttcaaactgttgagggctcatgccctggagtgtttatcattcaaattgttgggggcttatgccc 18274874  T
Q  111 cggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||||||||  |||| ||||||| ||||    
T  18274873 cggaatgcttagtcattcaacacgttgaaaatagtgccac 18274834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 28204700 - 28204835
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  28204700 gttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctagaatgtttatcattcaaattgttgggggcttatgccccgga 28204799  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||||  |||| |||| |||||||    
T  28204800 atgcttagtcattcaacacgttgaaaatggtaccac 28204835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 2333395 - 2333552
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    ||||||||||||| | |||||||||| ||||||||||||| |  |||||||||| |||||||||||||||| |||||||  |  ||||||||||||||||    
T  2333395 ctttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaatc-gttgagggctcatgccttggaatgccttgtcattcaaattgttgg 2333493  T
Q  99 gg-gcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 156  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2333494 ggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 2333552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 14432690 - 14432840
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttggggg 101  Q
    ||||||||||| |||| ||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  |||||||||||||||||||    
T  14432690 tgtcattcaactgttgggggctcatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaattgttggggg 14432789  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  14432790 cttatgccccggaatgcttagtcattcaacccgttgaaattagtaccacgt 14432840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 22900644 - 22900780
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||||  ||||||||| | |||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  22900644 gttgagggctcatgccctggaatgctttgtcattcaacc-gttgagggcttatgccctggaatgttcatcattcaaattgttgggggcttatgctccgga 22900742  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    |||||||||||||||||  |||| ||||||||||||||    
T  22900743 atgcttagtcattcaacacgttgaaaatagtaccacgt 22900780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 53 - 152
Target Start/End: Complemental strand, 37358279 - 37358180
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||    
T  37358279 ctgttgagggctcatgccctggaatgatcattattcaaattgttgggggcttatgccccggaatgcttagtcattcaacccgttgaaaatagtaccacgt 37358180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 18823577 - 18823462
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||| | |||||||||||||| | ||||||||| |||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||    
T  18823577 gttgagggttcatgccctggaatgccttgtcattcaaactgttgagggctcatgccctagaatgtttatcattcaaattgttgggggcttatgccccgga 18823478  T
Q  115 atgcttagtcattcaa 130  Q
    ||||||||||||||||    
T  18823477 atgcttagtcattcaa 18823462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 16400728 - 16400611
Alignment:
Q  16 gttgagggcttatgccctg-gaatgctcgt-cattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| |||||||| ||||||| || ||||||| |||||||||||||||||| ||||||| | ||||||||||||||||||||||||| ||||||    
T  16400728 gttgagggctcatgccctgtgaatgctagttcattcaaactgttgagggctcatgccttggaatgtttatcattcaaattgttgggggcttattccccgg 16400629  T
Q  114 aatgcttagtcattcaac 131  Q
    ||||||||||||||||||    
T  16400628 aatgcttagtcattcaac 16400611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 296307 - 296177
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttggg 99  Q
    |||||||||||||| |||||||||| ||||||||||||| |  |||||||| | |||||||||| |||||||||||||  |  |||||||||||||||||    
T  296307 ctttgtcattcaactgttgagggctcatgccctggaatgttaatcattcaacc-gttgagggcttatgccctggaatgtcttgtcattcaaattgttggg 296209  T
Q  100 ggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||| |||||||||||||||||||||||||    
T  296208 ggcttaagccccggaatgcttagtcattcaac 296177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20901146 - 20901017
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggg 99  Q
    |||||||||||||| |||||||||||||||| |||||||||  ||||||||| |||||||||||| || ||||  |||| | ||||||||||||||||||    
T  20901146 ctttgtcattcaactgttgagggcttatgccatggaatgctttgtcattcaa-ctgttgagggcttattcccttcaatgtttatcattcaaattgttggg 20901048  T
Q  100 ggcttatgccccggaatgcttagtcattcaac 131  Q
    | ||||||||||||||||||||||||||||||    
T  20901047 g-cttatgccccggaatgcttagtcattcaac 20901017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 130
Target Start/End: Original strand, 2333361 - 2333485
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    |||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| | ||||||| ||| |||| |||||     
T  2333361 tcattcaaccgttgagggctcatgccctggaatgctttgtcattcaatctgttgagggctcatgccctggaatgttaatcattc-aatcgttgagggctc 2333459  T
Q  105 atgccccggaatgcttagtcattcaa 130  Q
    |||||  ||||||| | |||||||||    
T  2333460 atgccttggaatgccttgtcattcaa 2333485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 20 - 131
Target Start/End: Complemental strand, 19209536 - 19209423
Alignment:
Q  20 agggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgc 118  Q
    |||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||||| | || |||||||||||||||||||||| ||| |||||||    
T  19209536 agggcttatgccttggaatgccttgtcattcaaactgttgagggctcatgccctggaatgtttattattcaaattgttgggggcttatcccctggaatgc 19209437  T
Q  119 tt-agtcattcaac 131  Q
    || |||||||||||    
T  19209436 ttaagtcattcaac 19209423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 28312195 - 28312083
Alignment:
Q  19 gagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatg 117  Q
    ||||||| |||||||| ||||||  ||||||||| |||||||||||| ||||| ||||||| | ||||||||||||||||||||||| ||||||||||||    
T  28312195 gagggctcatgccctgaaatgctttgtcattcaa-ctgttgagggcttatgccttggaatgtttatcattcaaattgttgggggcttttgccccggaatg 28312097  T
Q  118 cttagtcattcaac 131  Q
    ||||||||||||||    
T  28312096 cttagtcattcaac 28312083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 2 - 117
Target Start/End: Complemental strand, 20586901 - 20586785
Alignment:
Q  2 tttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggg 100  Q
    ||||||||||||  |||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||| | |||||||||  ||||| ||    
T  20586901 tttgtcattcaattgttgagggctcatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaatctgttgagg 20586802  T
Q  101 gcttatgccccggaatg 117  Q
    ||| |||||| ||||||    
T  20586801 gctcatgccctggaatg 20586785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 115
Target Start/End: Complemental strand, 20579208 - 20579094
Alignment:
Q  2 tttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggg 100  Q
    ||||||||||||  |||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||||||| | |||||||||  ||||| ||    
T  20579208 tttgtcattcaattgttgagggctcatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaatctgttgagg 20579109  T
Q  101 gcttatgccccggaa 115  Q
    ||| |||||| ||||    
T  20579108 gctcatgccctggaa 20579094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 130
Target Start/End: Complemental strand, 20631094 - 20630967
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggggg 101  Q
    ||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  ||||||||| ||||| |||    
T  20631094 tgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattcaaactgttgaggg 20630996  T
Q  102 cttatgccccggaatgcttagtcattcaa 130  Q
    || |||||| ||||||| | |||||||||    
T  20630995 ctcatgccctggaatgccttgtcattcaa 20630967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 22900562 - 22900681
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||| |  |||||||| | ||||||||||||||||||||||||  |  ||||||||||||||| ||||| ||||||    
T  22900562 aaccgttgagggctcatgccctggaatgttaatcattcaacc-gttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccc 22900660  T
Q  111 cggaatgcttagtcattcaac 131  Q
     ||||||||| ||||||||||    
T  22900661 tggaatgctttgtcattcaac 22900681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 45307068 - 45306957
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    ||||||||||||||||||||||||||||||||||| || | |||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| |||||    
T  45307068 gtcattcaaccgttgagggcttatgccctggaatgccttgccattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggct 45306970  T
Q  104 tatgccccggaat 116  Q
    ||||||| |||||    
T  45306969 tatgccctggaat 45306957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 45307099 - 45306981
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||||||  |   |||||||||||||| ||||| ||||||    
T  45307099 aaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatgccttgccattcaaattgttgagggctcatgccc 45307001  T
Q  111 cggaatgcttagtcattcaac 131  Q
     |||||| ||| |||||||||    
T  45307000 tggaatg-ttaatcattcaac 45306981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 296335 - 296218
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||| | ||||||| ||  |||| ||||||||||||    
T  296335 aaccgttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggcttatgccc 296238  T
Q  111 cggaatgcttagtcattcaa 130  Q
     ||||||  | |||||||||    
T  296237 tggaatgtcttgtcattcaa 296218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 2333289 - 2333407
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| |||||||||||||||  |||||||||||||| |||||||| ||||||||| || | ||||||| ||  |||| ||||| ||||||    
T  2333289 aaccgttgagggctcatgccctggaatgctttgtcattcaatctgtcgagggctcgtgccctggagtgttaatcattc-aaccgttgagggctcatgccc 2333387  T
Q  111 cggaatgcttagtcattcaa 130  Q
     ||||||||| |||||||||    
T  2333388 tggaatgctttgtcattcaa 2333407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 20579244 - 20579119
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggc 102  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||| |||||||||||||||||||||||||  |  ||||||||  ||||| ||||    
T  20579244 gtcattcaaccgttgagggcttatgccctggaatgttttgtcattcaat-tgttgagggctcatgccctggaatgccttgtcattcaatctgttgagggc 20579146  T
Q  103 ttatgccccggaatgcttagtcattcaa 130  Q
    | |||||| |||||| ||| ||||||||    
T  20579145 tcatgccctggaatg-ttaatcattcaa 20579119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 20579275 - 20579158
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||||||  |  |||||| |||||||| ||||| ||||||    
T  20579275 aaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatgttttgtcattc-aattgttgagggctcatgccc 20579178  T
Q  111 cggaatgcttagtcattcaa 130  Q
     ||||||| | |||||||||    
T  20579177 tggaatgccttgtcattcaa 20579158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 20586937 - 20586812
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggc 102  Q
    |||||||||||||||||||||||||||||||||||  | |||||||||| |||||||||||||||||||||||||  |  ||||||||  ||||| ||||    
T  20586937 gtcattcaaccgttgagggcttatgccctggaatgttttgtcattcaat-tgttgagggctcatgccctggaatgccttgtcattcaatctgttgagggc 20586839  T
Q  103 ttatgccccggaatgcttagtcattcaa 130  Q
    | |||||| |||||| ||| ||||||||    
T  20586838 tcatgccctggaatg-ttaatcattcaa 20586812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 20586968 - 20586851
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||||||  |  |||||| |||||||| ||||| ||||||    
T  20586968 aaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatgttttgtcattc-aattgttgagggctcatgccc 20586871  T
Q  111 cggaatgcttagtcattcaa 130  Q
     ||||||| | |||||||||    
T  20586870 tggaatgccttgtcattcaa 20586851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 21181397 - 21181511
Alignment:
Q  17 ttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaa 115  Q
    ||||||||| |||||||||||||| | |||||| || |||||||||||||||||||| ||||| | || ||||||||||||| |||||||||||  ||||    
T  21181397 ttgagggctcatgccctggaatgccttgtcattgaaactgttgagggctcatgccctagaatgtttatgattcaaattgttgagggcttatgccatggaa 21181496  T
Q  116 tgcttagtcattcaac 131  Q
    || ||| |||||||||    
T  21181497 tg-ttaatcattcaac 21181511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 22900594 - 22900667
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||||||||| ||||||||||||| || |||||||||  |||||||||||||||||||||||||    
T  22900594 tcattcaaccgttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg 22900667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 14432663 - 14432778
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| |||||| |||||||||||||||||||  |  ||||||||| ||||| ||||| |||||| ||    
T  14432663 gttgagggcttatgccctggaatgctatgtcattcaa-ctgttgggggctcatgccctggaatgctttgtcattcaaactgttgagggctcatgccctgg 14432761  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||| | |||||||||    
T  14432762 aatgccttgtcattcaa 14432778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 20631121 - 20631007
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||||||||||  |  |||||| || ||||| |||||||||||| ||    
T  20631121 gttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttgagggcttatgccctgg 20631024  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||||| |||||||||    
T  20631023 aatgctttgtcattcaa 20631007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 36181380 - 36181265
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  ||||||||| ||||| ||||| |||||| ||    
T  36181380 gttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctgg 36181282  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||| | |||||||||    
T  36181281 aatgccttgtcattcaa 36181265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 22 - 130
Target Start/End: Complemental strand, 293970 - 293861
Alignment:
Q  22 ggcttatgccc-tggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgct 119  Q
    ||||||||||| |||||||| | |||||||||| ||||||||||||||||||||||||| | ||||||| || ||||| |||||||||||  |||||||     
T  293970 ggcttatgcccctggaatgccttgtcattcaatttgttgagggctcatgccctggaatgttaatcattc-aactgttgagggcttatgccttggaatgcc 293872  T
Q  120 tagtcattcaa 130  Q
    | |||||||||    
T  293871 ttgtcattcaa 293861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 18823627 - 18823521
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggct 103  Q
    ||||||||| |||||||||||||||||||||||| ||  |||||||| |||||||||| |||||||||||||||  |  ||||||||| ||||| |||||    
T  18823627 tcattcaactgttgagggcttatgccctggaatgccttttcattcaaactgttgagggttcatgccctggaatgccttgtcattcaaactgttgagggct 18823528  T
Q  104 tatgccc 110  Q
     ||||||    
T  18823527 catgccc 18823521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 22900668 - 22900745
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||  ||||| ||||| |||| | ||||||    
T  22900668 ctttgtcattcaaccgttgagggcttatgccctggaatgttcatcattcaaattgttgggggcttatgctccggaatg 22900745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 20901210 - 20901094
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| |||||||| ||||| | ||||||||| | ||||||||||||||||||||||||  |  |||||| || ||||| |||||||||||  ||    
T  20901210 gttgagggctcatgccctgtaatgccttgtcattcaaaccgttgagggctcatgccctggaatgctttgtcattc-aactgttgagggcttatgccatgg 20901112  T
Q  114 aatgcttagtcattcaac 131  Q
    ||||||| ||||||||||    
T  20901111 aatgctttgtcattcaac 20901094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 130
Target Start/End: Complemental strand, 18823656 - 18823541
Alignment:
Q  15 cgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||| ||||||||||||| |  |||||||| |||||||||||| |||||||||||||  |  ||||||||| ||||| ||| | |||||| ||    
T  18823656 cgttgagggctcatgccctggaatgttaatcattcaa-ctgttgagggcttatgccctggaatgccttttcattcaaactgttgagggttcatgccctgg 18823558  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||| | |||||||||    
T  18823557 aatgccttgtcattcaa 18823541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 21181436 - 21181549
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaa 115  Q
    |||||||||| ||||||| ||||| |  | ||||||  ||||||||||| ||||| ||||||| | ||||||| || ||||| |||||||||||| ||||    
T  21181436 gttgagggctcatgccctagaatgtttatgattcaaattgttgagggcttatgccatggaatgttaatcattc-aactgttgagggcttatgccctggaa 21181534  T
Q  116 tgcttagtcattcaa 130  Q
    ||| | |||||||||    
T  21181535 tgccttgtcattcaa 21181549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 20901184 - 20901108
Alignment:
Q  3 ttgtcattcaa-ccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||| |||||||||||| |||||||||||||| | ||||||||| |||||||||||| ||||| |||||||    
T  20901184 ttgtcattcaaaccgttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccatggaatg 20901108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 24087220 - 24087142
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| |||||||||| ||||||||||||| ||  ||||||||  ||||| ||||| |||||| ||||||    
T  24087220 ctttgtcattcaactgttgagggctcatgccctggaatgccttatcattcaaattgttgggggcttatgccccggaatg 24087142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 28312174 - 28312097
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| |||||||||||||||| ||||||| |  ||||||||  ||||| |||||  ||||| ||||||    
T  28312174 ctttgtcattcaactgttgagggcttatgccttggaatgtttatcattcaaattgttgggggcttttgccccggaatg 28312097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 131
Target Start/End: Complemental strand, 20901212 - 20901133
Alignment:
Q  53 ctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||||||||||||||| ||||  |  |||||||||  |||| ||||| |||||| ||||||||| ||||||||||    
T  20901212 ctgttgagggctcatgccctgtaatgccttgtcattcaaaccgttgagggctcatgccctggaatgctttgtcattcaac 20901133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 293935 - 293874
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||| ||||||||||||| |  |||||||| |||||||||||| ||||| |||||||    
T  293935 gttgagggctcatgccctggaatgttaatcattcaa-ctgttgagggcttatgccttggaatg 293874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 78
Target Start/End: Original strand, 21181341 - 21181419
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctg-gaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||| | ||| |||||||||||| || |||||| | ||||||||| || |||||||||||||||||||||||    
T  21181341 ttgtcattcaaactgttaagggcttatgccttgtgaatgccttgtcattcaaactattgagggctcatgccctggaatg 21181419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 110; Significance: 2e-55; HSPs: 3)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 2903 - 2758
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  2903 tcattcaactgttgagggcttatgccctggaatgtcttgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttaggggctt 2804  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||| |||||||||||||||||||||  |||| ||||||||||||    
T  2803 atgccgcggaatgcttagtcattcaacccgttgaaaatagtaccac 2758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 2935 - 2870
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| ||||||||||||| |  |||||||| |||||||||||| |||||||||||||    
T  2935 aaccgttgagggctcatgccctggaatgttaatcattcaa-ctgttgagggcttatgccctggaatg 2870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 130
Target Start/End: Complemental strand, 2931 - 2857
Alignment:
Q  55 gttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||||||||||||||| | ||||||| || ||||| |||||||||||| ||||||  | |||||||||    
T  2931 gttgagggctcatgccctggaatgttaatcattc-aactgttgagggcttatgccctggaatgtcttgtcattcaa 2857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 109; Significance: 6e-55; HSPs: 71)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 6 - 129
Target Start/End: Complemental strand, 44431616 - 44431492
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  44431616 tcattcaaccgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgagggctt 44431517  T
Q  105 atgccccggaatgcttagtcattca 129  Q
    |||||||||||||||||||||||||    
T  44431516 atgccccggaatgcttagtcattca 44431492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 6 - 155
Target Start/End: Original strand, 45135351 - 45135502
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaa-tgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  45135351 tcattcaaccgttgagggcttatgccctggaactgccttgtcattcaatctgttgagggctcatgccctggaatgtccatcattcaaattgttgggggct 45135450  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgt 155  Q
    ||||||||||||||||||||||||||| | |||| |||||||||| ||||||    
T  45135451 tatgccccggaatgcttagtcattcaatgagttgaaaatagtaccccgtcgt 45135502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 28853639 - 28853500
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaa 115  Q
    |||||||||| ||||||||||||| |  |||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||    
T  28853639 gttgagggctcatgccctggaatgttaatcattcaatctgttgagggctcatgccctggaatgtccatcattcaaattgttgggggcttatgccccggaa 28853540  T
Q  116 tgcttagtcattcaacgtgttggaaatagtaccacgtcgt 155  Q
    ||||||||||||||| |||||| |||||||||| ||||||    
T  28853539 tgcttagtcattcaatgtgttgaaaatagtaccccgtcgt 28853500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 6 - 148
Target Start/End: Original strand, 7301595 - 7301738
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||||||||||||||||||||||| | ||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||  | |||||||    
T  7301595 tcattcaaccgttgagggcttatgccctgaattgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattcaaatttgttggggctt 7301694  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtacc 148  Q
    |||||||||||||||||||||||||||| |||| ||||||||||    
T  7301695 atgccccggaatgcttagtcattcaacgagttgaaaatagtacc 7301738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 363727 - 363594
Alignment:
Q  18 tgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaat 116  Q
    ||||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  363727 tgagggcttatgccctggactgctttgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccctggaat 363628  T
Q  117 gcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||  |||| |||| |||||||    
T  363627 gcttagtcattcaacccgttgaaaatggtaccac 363594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 43112034 - 43111889
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  43112034 tcattcaactgttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgtttatcattcaaattgttgggggctt 43111935  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    || ||||||||||||||||||||||||  |||| |||| |||||||    
T  43111934 atcccccggaatgcttagtcattcaacacgttgaaaatggtaccac 43111889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 156
Target Start/End: Original strand, 44523204 - 44523345
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| |||||||||||||||  ||||||||| | ||||||||||||||||||||||||  |  |||||||||||||||||||||||||||||||    
T  44523204 gttgagggctcatgccctggaatgctttgtcattcaacc-gttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccccgg 44523302  T
Q  114 aatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 156  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  44523303 aatgcttagtcattcaacgtgttggaaatagtaccacgtcgta 44523345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 22145759 - 22145913
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttg 97  Q
    ||||||||||||| | ||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  |||||||||||||||    
T  22145759 ctttgtcattcaaactgttgagggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaattgttg 22145858  T
Q  98 ggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||||||||||||||||||||||  |||| || |||||||||||    
T  22145859 ggggcttatgccccggaatgcttagtcattcaacccgttgaaattagtaccacgt 22145913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 3 - 128
Target Start/End: Original strand, 6608696 - 6608822
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 101  Q
    ||||||||||| | |||||||||| ||||||||||||| |  ||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  6608696 ttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaatctgttgagggctcatgccctggaatgttcatcattcaaagtgttggggg 6608795  T
Q  102 cttatgccccggaatgcttagtcattc 128  Q
    |||||||| ||||||||||||||||||    
T  6608796 cttatgcctcggaatgcttagtcattc 6608822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 149
Target Start/End: Original strand, 21415580 - 21415717
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  21415580 aaccgttgagggctcatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattc-aattgctgggggcttatgccc 21415678  T
Q  111 cggaatgcttagtcattcaacgtgttggaaatagtacca 149  Q
     ||||||||||||||||||||  |||| |||| ||||||    
T  21415679 tggaatgcttagtcattcaacacgttgaaaatggtacca 21415717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 20460004 - 20459874
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggg 99  Q
    |||||||||||||| ||||| |||||||||||| |||||||  ||||||||| |||||||||||| ||||||||||||| | ||||||||||||||||||    
T  20460004 ctttgtcattcaactgttgacggcttatgccctagaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgtttatcattcaaattgttggg 20459906  T
Q  100 ggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||| |||||||||||||||||||||    
T  20459905 ggcttatgcctcggaatgcttagtcattcaac 20459874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 32949668 - 32949542
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||| |||||||||||||||| |||||||| | |||||||||  ||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  32949668 tcattcaactgttgagggcttatgccttggaatgccttgtcattcaaattgttgagggctcatgccctggaatgtttatcattcaaattgttgggggctt 32949569  T
Q  105 atgccccggaatgcttagtcattcaac 131  Q
    ||||||  |||||||||||||||||||    
T  32949568 atgccctagaatgcttagtcattcaac 32949542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 19881841 - 19881725
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    ||||| ||||||||||||||||||| | |||||||||  ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||    
T  19881841 gttgacggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgtttatcattcaaattgttgggggcttatgccacgga 19881742  T
Q  115 atgcttagtcattcaac 131  Q
    |||||||||||||||||    
T  19881741 atgcttagtcattcaac 19881725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 17614646 - 17614513
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||||  ||||||||| | |||||||||| ||||||||||||| |||||||||||||||||||||||||| || |||||    
T  17614646 gttgagggctcatgccctggaatgctttgtcattcaacc-gttgagggcttatgccctggaatgttcatcattcaaattgttgggggcttacgctccgga 17614548  T
Q  115 atgcttagtcattcaacgtgttggaaatagtacca 149  Q
    |||||||||||||||||  |||| |||||||||||    
T  17614547 atgcttagtcattcaacacgttgaaaatagtacca 17614513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 4 - 152
Target Start/End: Original strand, 22059756 - 22059905
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttggggg 101  Q
    ||||||||||| ||||| ||||||||||||||||||||  ||||||||  ||||||||||||||||||||||||||  |  |||||||||||||||||||    
T  22059756 tgtcattcaactgttgatggcttatgccctggaatgctttgtcattcag-ctgttgagggctcatgccctggaatgccttgtcattcaaattgttggggg 22059854  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||| ||||||||||||||||||  |||| || |||||||||||    
T  22059855 cttatgccccgaaatgcttagtcattcaacccgttgaaattagtaccacgt 22059905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 5 - 138
Target Start/End: Original strand, 6608659 - 6608792
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| | |||||||||  ||||| |||||    
T  6608659 gtcattcaaccgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaatctgttgagggct 6608758  T
Q  104 tatgccccggaatgcttagtcattcaacgtgttgg 138  Q
     |||||| |||||| ||  |||||||| |||||||    
T  6608759 catgccctggaatg-ttcatcattcaaagtgttgg 6608792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 28853690 - 28853577
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||| | |||||||||  ||||| |||||    
T  28853690 gtcattcaaccgttgagggcttatgccctggaatgccttgtcattcaatttgttgagggctcatgccctggaatgttaatcattcaatctgttgagggct 28853591  T
Q  104 tatgccccggaatg 117  Q
     |||||| ||||||    
T  28853590 catgccctggaatg 28853577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 362206 - 362356
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggg 99  Q
    ||||||||||||||  |||||||||||||||||  ||| | | ||||||||| |||||||||||| || |||| ||||| | ||||||||||||||||||    
T  362206 ctttgtcattcaactattgagggcttatgccctataataccttgtcattcaaactgttgagggcttataccctagaatgtttatcattcaaattgttggg 362305  T
Q  100 ggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||| |||||||||| | ||||||||||||  |||| |||| |||||||    
T  362306 ggcttaagccccggaatacctagtcattcaacacgttgaaaatggtaccac 362356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 7301434 - 7301563
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggg 99  Q
    |||||||||||||  ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| | ||||||| ||  |||| |    
T  7301434 ctttgtcattcaaatgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgctctggaatgttaatcattc-aaccgttgag 7301532  T
Q  100 ggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||||||||| ||||||| | |||||||||    
T  7301533 ggcttatgccctggaatgccttgtcattcaa 7301563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 142
Target Start/End: Original strand, 38186114 - 38186226
Alignment:
Q  30 ccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattc 128  Q
    ||||||||||||  ||||||||| | ||||| |||| ||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  38186114 ccctggaatgctttgtcattcaacc-gttgatggcttatgccctggaatgtttatcattcaaattgttgggggcttatgccccggaatgcttagtcattc 38186212  T
Q  129 aacgtgttggaaat 142  Q
    ||| ||||| ||||    
T  38186213 aacatgttgaaaat 38186226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 7301517 - 7301602
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaa 90  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||||||| | |||||||||    
T  7301517 tcattcaaccgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgctctggaatgttaatcattcaa 7301602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 21861647 - 21861759
Alignment:
Q  19 gagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatg 117  Q
    ||||||| ||||||| |||||||  ||||||||| ||  |||||||| ||||||||||||| | ||||||||||||||||||||||||||||| ||||||    
T  21861647 gagggctcatgccctagaatgctttgtcattcaa-ctactgagggcttatgccctggaatgtttatcattcaaattgttgggggcttatgccctggaatg 21861745  T
Q  118 cttagtcattcaac 131  Q
    ||||||||||||||    
T  21861746 cttagtcattcaac 21861759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 17795085 - 17794970
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  |||||||| | |||||||||| |||||||||||||  |  ||||||||||||||||||||||||||| ||||    
T  17795085 gttgagggctcatgccctggaatgttaatcattcaacc-gttgagggcttatgccctggaatgccttgtcattcaaattgttgggggcttatgcctcgga 17794987  T
Q  115 atgcttagtcattcaac 131  Q
    |||||||||||||||||    
T  17794986 atgcttagtcattcaac 17794970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 45135241 - 45135359
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| ||||| ||||||    
T  45135241 aaccgttgagggctcatgccctggaatgctcgtcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccc 45135339  T
Q  111 cggaatgcttagtcattcaac 131  Q
     |||||| ||| |||||||||    
T  45135340 tggaatg-ttaatcattcaac 45135359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 6608592 - 6608706
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| || |||||| ||  |||| |||||||||||| |||    
T  6608592 gttgagggctcatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgctcgtcattc-aaccgttgagggcttatgccctgga 6608690  T
Q  115 atgcttagtcattcaa 130  Q
    |||| | |||||||||    
T  6608691 atgccttgtcattcaa 6608706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 28853732 - 28853604
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggg 99  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||||||  |  |||||||| |||||| |    
T  28853732 ctttgtcgttcaaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatgccttgtcattcaatttgttgag 28853634  T
Q  100 ggcttatgccccggaatgcttagtcattcaa 130  Q
    |||| |||||| |||||| ||| ||||||||    
T  28853633 ggctcatgccctggaatg-ttaatcattcaa 28853604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 17795135 - 17795011
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    |||||||||||| ||||||||||||||||||||| |  |||||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| ||||||    
T  17795135 tcattcaaccgtggagggcttatgccctggaatgttttgtcattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggctt 17795037  T
Q  105 atgccccggaatgcttagtcattcaa 130  Q
    |||||| ||||||| | |||||||||    
T  17795036 atgccctggaatgccttgtcattcaa 17795011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 44431682 - 44431570
Alignment:
Q  18 tgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaat 116  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||| | ||||||| ||  |||| |||||||||||| |||||    
T  44431682 tgagggcttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctgaaatgttaatcattc-aaccgttgagggcttatgccctggaat 44431584  T
Q  117 gcttagtcattcaa 130  Q
    || | |||||||||    
T  44431583 gccttgtcattcaa 44431570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 131
Target Start/End: Complemental strand, 17614728 - 17614609
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||| |  |||||||| | ||||||||||||||||||||||||  |  ||||||||||||||| ||||| ||||||    
T  17614728 aaccgttgagggctcatgccctggaatgttaatcattcaacc-gttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccc 17614630  T
Q  111 cggaatgcttagtcattcaac 131  Q
     ||||||||| ||||||||||    
T  17614629 tggaatgctttgtcattcaac 17614609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 130
Target Start/End: Original strand, 22145723 - 22145851
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggggg 101  Q
    ||||||| ||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  ||||||||| ||||| |||    
T  22145723 tgtcatttaactgttgagggcttatgccctggaatgctttgtcattcaaactgttgagggcttatgccctggaatgctttgtcattcaaactgttgaggg 22145822  T
Q  102 cttatgccccggaatgcttagtcattcaa 130  Q
    || |||||| ||||||| | |||||||||    
T  22145823 ctcatgccctggaatgccttgtcattcaa 22145851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 7301368 - 7301485
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||||||  |  ||||||||| ||||| ||||||||||||    
T  7301368 aaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatgctttgtcattcaaa-tgttgagggcttatgccc 7301465  T
Q  111 cggaatgcttagtcattcaa 130  Q
     ||||||| | |||||||||    
T  7301466 tggaatgccttgtcattcaa 7301485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 115
Target Start/End: Original strand, 45135272 - 45135382
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    |||||||||| |||||||||||||||||||||||| || |||||||||  ||||||||||||||||||||||||| | ||||||| ||  |||| |||||    
T  45135272 gtcattcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggct 45135370  T
Q  104 tatgccccggaa 115  Q
    ||||||| ||||    
T  45135371 tatgccctggaa 45135382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 19881930 - 19881805
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgctcgt-cattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||  |||||| |||||||||||||||||||  | ||||||| |||||||||||| ||||| ||||||| | |||||||||| |||||  |||||    
T  19881930 tcattcaattgttgagtgcttatgccctggaatgctttttcattcaaactgttgagggcttatgccatggaatgtttatcattcaaactgttgacggctt 19881831  T
Q  105 atgccccggaatgcttagtcattcaa 130  Q
    |||||| ||||||| | |||||||||    
T  19881830 atgccctggaatgccttgtcattcaa 19881805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 44431800 - 44431727
Alignment:
Q  18 tgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaa 90  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| | |||||||||    
T  44431800 tgagggcttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaa 44431727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 22145696 - 22145811
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  |||||| || |||||||||||| |||||||||||||  |  ||||||||| ||||| |||||||||||| ||    
T  22145696 gttgagggcttatgccctggaatgctatgtcatttaa-ctgttgagggcttatgccctggaatgctttgtcattcaaactgttgagggcttatgccctgg 22145794  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||||| |||||||||    
T  22145795 aatgctttgtcattcaa 22145811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 17795206 - 17795089
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| |||||||||||||| | ||||||||| |||||||||||||||||||||||||| | ||||||| ||  || | ||||||||||||    
T  17795206 aaccgttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgttaatcattc-aaccgtggagggcttatgccc 17795109  T
Q  111 cggaatgcttagtcattcaa 130  Q
     |||||| || |||||||||    
T  17795108 tggaatgttttgtcattcaa 17795089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 19881998 - 19881884
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    ||||||||||||||||| ||||||| | |||||||||  ||| ||||||||||||||||||||| | ||||||| |||||||| | |||||||||| |||    
T  19881998 gttgagggcttatgccccggaatgccttgtcattcaaattgtcgagggctcatgccctggaatgtttatcattc-aattgttgagtgcttatgccctgga 19881900  T
Q  115 atgcttagtcattcaa 130  Q
    ||||||  ||||||||    
T  19881899 atgctttttcattcaa 19881884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 17614696 - 17614623
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||||||||| ||||||||||||| || |||||||||  |||||||||||||||||||||||||    
T  17614696 tcattcaaccgttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatg 17614623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 19882042 - 19881923
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgcc 109  Q
    |||||||||||||||||||||| |||||| ||||||||||| |||||||||||| |||||| ||||||  |  ||||||||||||| | ||||| |||||    
T  19882042 aaccgttgagggcttatgccctagaatgcctcgtcattcaaactgttgagggcttatgccccggaatgccttgtcattcaaattgtcgagggctcatgcc 19881943  T
Q  110 ccggaatgcttagtcattcaa 130  Q
    | |||||| ||| ||||||||    
T  19881942 ctggaatgttta-tcattcaa 19881923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 17795178 - 17795049
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggg 99  Q
    |||||||||||||| |||||||||| ||||||||||||| |  |||||||| | || ||||||| |||||||||||||  |  ||||||||||||||| |    
T  17795178 ctttgtcattcaactgttgagggctcatgccctggaatgttaatcattcaa-ccgtggagggcttatgccctggaatgttttgtcattcaaattgttgag 17795080  T
Q  100 ggcttatgccccggaatgcttagtcattcaac 131  Q
    |||| |||||| |||||| ||| |||||||||    
T  17795079 ggctcatgccctggaatg-ttaatcattcaac 17795049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 7301399 - 7301472
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||||||||||||||||||||||||| | |||||||||  ||||||||||| |||||||||||||    
T  7301399 gtcattcaaccgttgagggcttatgccctggaatgctttgtcattcaa-atgttgagggcttatgccctggaatg 7301472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 22521912 - 22522044
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctg-gaatgctcg-tcattcaatctgttgagggctcatgccctg-gaatg--atcatcattcaaattgttg 97  Q
    ||||| ||||| |||||||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||| |||||   | | |||||||| |||||    
T  22521912 ttgtcgttcaatcgttgagggcttatgccctgtgaatgctagatcattcaaaccgttgagggctcatgccctgtgaatgctttaaccattcaaactgttg 22522011  T
Q  98 ggggcttatgccccggaatgcttagtcattcaa 130  Q
     ||||| |||||| ||||||||| |||||||||    
T  22522012 agggctcatgccctggaatgctttgtcattcaa 22522044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 20454349 - 20454262
Alignment:
Q  43 gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||| |||||||||||| |||||||| |||| | |||||||||||| |  ||||||||||||| | ||||||||||||||||||    
T  20454349 gtcattcaa-ctgttgagggcttatgccctgaaatgtttatcattcaaattatcaggggcttatgccctgaaatgcttagtcattcaac 20454262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 152
Target Start/End: Original strand, 24708120 - 24708219
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatca-tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacg 151  Q
    |||||||||||||||||||| ||||| |   ||||||||   |||| |||||||||||||||||||||||||||||||||  |||| |||||||||||||    
T  24708120 ctgttgagggctcatgccctagaatgctatgtcattcaacc-gttgagggcttatgccccggaatgcttagtcattcaacccgttgaaaatagtaccacg 24708218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 17614622 - 17614559
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggct 64  Q
    ||||||||||||||||||||||||||||||||||||||| || ||||||||  ||||| |||||    
T  17614622 ctttgtcattcaaccgttgagggcttatgccctggaatgttcatcattcaaattgttgggggct 17614559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 28853756 - 28853643
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||| | ||| ||||| | |||||||||||||||||||||||| || |||||| ||  |||| |||||||||||| |||    
T  28853756 gttgagggctcatgccctggaatgctttgtcgttcaa-ccgttgagggctcatgccctggaatgctcgtcattc-aaccgttgagggcttatgccctgga 28853659  T
Q  115 atgcttagtcattcaa 130  Q
    |||| | |||||||||    
T  28853658 atgccttgtcattcaa 28853643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 44523228 - 44523306
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||||| ||||||||||||| || |||||||||  ||||| ||||| |||||| ||||||    
T  44523228 ctttgtcattcaaccgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 44523306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 3 - 130
Target Start/End: Complemental strand, 15267250 - 15267118
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctg-gaatgctcg-tcattcaatctgttgagggctcatgccctg-gaatg--atcatcattcaaattgttg 97  Q
    ||||| ||||| |||||||||||||||||||| ||||||| | |||||||| | ||||||||||||||||||| |||||   | | |||||||| |||||    
T  15267250 ttgtcgttcaatcgttgagggcttatgccctgtgaatgctagttcattcaaaccgttgagggctcatgccctgtgaatgctttaaccattcaaactgttg 15267151  T
Q  98 ggggcttatgccccggaatgcttagtcattcaa 130  Q
     ||||| |||||| ||||||| | |||||||||    
T  15267150 agggctcatgccctggaatgccttgtcattcaa 15267118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 38186124 - 38186201
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||||||||| |||||||||||||||||| |  ||||||||  ||||| ||||| |||||| ||||||    
T  38186124 ctttgtcattcaaccgttgatggcttatgccctggaatgtttatcattcaaattgttgggggcttatgccccggaatg 38186201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 21415540 - 21415607
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| |||||||||||||| | | ||||||| | ||||||||||||||||||||||||    
T  21415540 aaccgttgagggctcatgccctggaatgctttgccattcaaaccgttgagggctcatgccctggaatg 21415607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 32949696 - 32949583
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  |||||||| |||||||||||| ||||| |||||||  |  ||||||||||||||| ||||| |||||| |||    
T  32949696 gttgagggctcatgccctggaatgttaatcattcaa-ctgttgagggcttatgccttggaatgccttgtcattcaaattgttgagggctcatgccctgga 32949598  T
Q  115 atgcttagtcattcaa 130  Q
    ||| ||| ||||||||    
T  32949597 atgttta-tcattcaa 32949583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 363705 - 363627
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||| | |||||||||| ||||||||||||| || ||||||||  ||||| ||||| |||||||||||||    
T  363705 ctttgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccctggaatg 363627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 43112100 - 43111988
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaa 115  Q
    ||||||| || ||| ||||||||| |  |||||||| |||||||||||||||||| ||||||  | ||||||| || ||||| |||||||||||| ||||    
T  43112100 gttgaggactcatgtcctggaatgttaatcattcaa-ctgttgagggctcatgccttggaatattaatcattc-aactgttgagggcttatgccctggaa 43112003  T
Q  116 tgcttagtcattcaa 130  Q
    ||| | |||||||||    
T  43112002 tgccttgtcattcaa 43111988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 70
Target Start/End: Complemental strand, 17795057 - 17794992
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgcc 70  Q
    |||||||||||||||||||||||||||||||||| || |||||||||  ||||| ||||| |||||    
T  17795057 tcattcaaccgttgagggcttatgccctggaatgccttgtcattcaaattgttgggggcttatgcc 17794992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 21861668 - 21861745
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||   |||||||||||||||||||||| |  ||||||||  ||||| ||||| |||||||||||||    
T  21861668 ctttgtcattcaactactgagggcttatgccctggaatgtttatcattcaaattgttgggggcttatgccctggaatg 21861745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 32949698 - 32949622
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||||||||||||||||| | ||||||| || ||||| |||||||||||  ||||||| | |||||||||    
T  32949698 ctgttgagggctcatgccctggaatgttaatcattc-aactgttgagggcttatgccttggaatgccttgtcattcaa 32949622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 131
Target Start/End: Original strand, 15004830 - 15004906
Alignment:
Q  56 ttgagggctcatgccctggaatgatca-tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||| ||||||||||||| |   ||||||||||||||| ||| |||||| | ||||||||||||||||||||    
T  15004830 ttgagggcttatgccctggaatgctttgtcattcaaattgttgagggtttatgctctggaatgcttagtcattcaac 15004906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 22059690 - 22059803
Alignment:
Q  16 gttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatgat-catcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||||  ||||||||| |||||||||||| |||||| || ||| |   |||||| || |||||  ||||||||||| ||    
T  22059690 gttgagggcttatgccctggaatgctatgtcattcaa-ctgttgagggcttatgcccagggatgctatgtcattc-aactgttgatggcttatgccctgg 22059787  T
Q  114 aatgcttagtcattca 129  Q
    ||||||| ||||||||    
T  22059788 aatgctttgtcattca 22059803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 78
Target Start/End: Original strand, 22059717 - 22059791
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgct-cgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||| ||||||||||||||||| || |||||  ||||||||| ||||||| |||| |||||||||||||    
T  22059717 tgtcattcaactgttgagggcttatgcccagggatgctatgtcattcaa-ctgttgatggcttatgccctggaatg 22059791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 24708149 - 24708186
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgct 41  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  24708149 tgtcattcaaccgttgagggcttatgccccggaatgct 24708186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 15004100 - 15004140
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgct 41  Q
    |||||| ||||||| ||||||||||||||||||||||||||    
T  15004100 ctttgttattcaactgttgagggcttatgccctggaatgct 15004140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 20460032 - 20459915
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgcc 109  Q
    ||||||||||| ||||||||||||||||| | ||||||||| ||||||| |||| ||||||| |||||  |  |||||| || ||||| |||||||||||    
T  20460032 aaccgttgaggacttatgccctggaatgctttgtcattcaa-ctgttgacggcttatgccctagaatgctttgtcattc-aactgttgagggcttatgcc 20459935  T
Q  110 ccggaatgcttagtcattcaa 130  Q
    | |||||| ||| ||||||||    
T  20459934 ctggaatgttta-tcattcaa 20459915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 15004076 - 15004138
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||||||| |||||| | || |||||| |||||||||||| |||||||||||||    
T  15004076 gttgagggcttatgccctagaatgctttgttattcaa-ctgttgagggcttatgccctggaatg 15004138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 22059792 - 22059863
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccc 71  Q
    |||||||||||| | |||||||||| ||||||||||||| || |||||||||  ||||| ||||| ||||||    
T  22059792 ctttgtcattcagctgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccc 22059863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 22434598 - 22434697
Alignment:
Q  15 cgttgagggcttatgccctg-gaatgctcg-tcattcaatctgttgagggctcatgccctg-gaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    ||||||||||| |||||||| |||||||   |||||||| ||||||||||||||||||||| |||||  | |||||||||| ||||| ||||| ||||||    
T  22434598 cgttgagggctcatgccctgtgaatgcttaatcattcaaactgttgagggctcatgccctgtgaatgcttaatcattcaaactgttgagggctcatgccc 22434697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 15004830 - 15004892
Alignment:
Q  17 ttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||||||||||||| | |||||||||  ||||||||| | |||| ||||||||    
T  15004830 ttgagggcttatgccctggaatgctttgtcattcaaattgttgagggtttatgctctggaatg 15004892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 20454353 - 20454315
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg 39  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  20454353 ctttgtcattcaactgttgagggcttatgccctgaaatg 20454315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 44 - 78
Target Start/End: Original strand, 44523193 - 44523227
Alignment:
Q  44 tcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||| ||||||||||||||||||||||||||    
T  44523193 tcattcaaactgttgagggctcatgccctggaatg 44523227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 93 - 130
Target Start/End: Original strand, 17272816 - 17272853
Alignment:
Q  93 tgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||||||| |||||| |||||||||||||||||||||    
T  17272816 tgttgggggtttatgctccggaatgcttagtcattcaa 17272853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 78
Target Start/End: Complemental strand, 44431734 - 44431661
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||| |||||||||||||||||| || | || |||||||||   | |||||||| |||||||||||||    
T  44431734 tcattcaaccattgagggcttatgccctgtaacgccttgtcattcaaagcggtgagggcttatgccctggaatg 44431661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 130
Target Start/End: Complemental strand, 44431810 - 44431766
Alignment:
Q  86 ttcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||||||| || |||||||||||| ||||||||| |||||||||    
T  44431810 ttcaaattggtgagggcttatgccctggaatgctttgtcattcaa 44431766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 106; Significance: 4e-53; HSPs: 5)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 2134 - 1989
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    |||||||||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2134 tcattcaaccgttgagggattatgccctagaatgccttgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 2035  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||||| |||||||||||||||||||  |||| |||| |||||||    
T  2034 atgccccagaatgcttagtcattcaacccgttgaaaatggtaccac 1989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 130
Target Start/End: Complemental strand, 2278 - 2166
Alignment:
Q  18 tgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaat 116  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| | ||||||| ||  |||| |||||||||||| |||||    
T  2278 tgagggcttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctggaatgttaatcattc-aaccgttgagggcttatgccctggaat 2180  T
Q  117 gcttagtcattcaa 130  Q
    ||||  ||||||||    
T  2179 gctttatcattcaa 2166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 2212 - 2127
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaa 90  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||  | |||||||||    
T  2212 tcattcaaccgttgagggcttatgccctggaatgctttatcattcaatctgttgagggctcatgccctggaatattaatcattcaa 2127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 2256 - 2140
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    ||||||||||||| | |||||||||| ||||||||||||| |  |||||||| | |||||||||| |||||||||||||  | |||||||||  |||||     
T  2256 ctttgtcattcaatctgttgagggctcatgccctggaatgttaatcattcaa-ccgttgagggcttatgccctggaatgctttatcattcaatctgttga 2158  T
Q  99 gggcttatgccccggaat 116  Q
    ||||| |||||| |||||    
T  2157 gggctcatgccctggaat 2140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 130
Target Start/End: Complemental strand, 2318 - 2244
Alignment:
Q  57 tgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||||||||||||||||||||  |  || ||||||||| || |||||||||||| ||||||||| |||||||||    
T  2318 tgagggctcatgccctggaatgccttgtcgttcaaattggtgagggcttatgccctggaatgctttgtcattcaa 2244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 102; Significance: 9e-51; HSPs: 2)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 7 - 131
Target Start/End: Original strand, 6118 - 6243
Alignment:
Q  7 cattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctta 105  Q
    ||||||||||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  6118 cattcaaccgttgagggcttatgccctagaatgccttgtcattcaatctgttgagggctcatgccctggaatgttcatctttcaaattgttgggggctta 6217  T
Q  106 tgccccggaatgcttagtcattcaac 131  Q
    ||||||||||||||||||||||||||    
T  6218 tgccccggaatgcttagtcattcaac 6243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 130
Target Start/End: Original strand, 6087 - 6163
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||||||||||||||||| | | ||||| ||  |||| ||||||||||||  |||||| | |||||||||    
T  6087 ctgttgagggctcatgccctggaatgttaagcattc-aaccgttgagggcttatgccctagaatgccttgtcattcaa 6163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 98; Significance: 2e-48; HSPs: 4)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 155
Target Start/End: Complemental strand, 32868 - 32715
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 101  Q
    ||||||||||| | |||||||||| ||||||| ||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  32868 ttgtcattcaatctgttgagggctcatgccctagaatgttaatcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttggggg 32769  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgt 155  Q
    ||||||||||||||||||||||||||||  | |||| |||||||||| ||||||    
T  32768 cttatgccccggaatgcttagtcattcattgagttgaaaatagtaccccgtcgt 32715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 117
Target Start/End: Complemental strand, 32905 - 32792
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||| | |||||||||  ||||| |||||    
T  32905 gtcattcaaccgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctagaatgttaatcattcaatctgttgagggct 32806  T
Q  104 tatgccccggaatg 117  Q
     |||||| ||||||    
T  32805 catgccctggaatg 32792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 32947 - 32871
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  32947 ctttgtcattcaaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatg 32871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 32971 - 32858
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||||  ||||||||| | |||||||||||||||||||||||| || |||||| ||  |||| |||||||||||| |||    
T  32971 gttgagggctcatgccctggaatgctttgtcattcaacc-gttgagggctcatgccctggaatgctcgtcattc-aaccgttgagggcttatgccctgga 32874  T
Q  115 atgcttagtcattcaa 130  Q
    |||| | |||||||||    
T  32873 atgccttgtcattcaa 32858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 98; Significance: 2e-48; HSPs: 4)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 3 - 155
Target Start/End: Original strand, 81944 - 82097
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 101  Q
    ||||||||||| | |||||||||| ||||||| ||||| |  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  81944 ttgtcattcaatctgttgagggctcatgccctagaatgttaatcattcaatctgttgagggctcatgccctggaatgttcatcattcaaattgttggggg 82043  T
Q  102 cttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtcgt 155  Q
    ||||||||||||||||||||||||||||  | |||| |||||||||| ||||||    
T  82044 cttatgccccggaatgcttagtcattcattgagttgaaaatagtaccccgtcgt 82097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 117
Target Start/End: Original strand, 81907 - 82020
Alignment:
Q  5 gtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||| | |||||||||  ||||| |||||    
T  81907 gtcattcaaccgttgagggcttatgccctggaatgccttgtcattcaatctgttgagggctcatgccctagaatgttaatcattcaatctgttgagggct 82006  T
Q  104 tatgccccggaatg 117  Q
     |||||| ||||||    
T  82007 catgccctggaatg 82020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 81865 - 81941
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||||||    
T  81865 ctttgtcattcaaccgttgagggctcatgccctggaatgctcgtcattcaa-ccgttgagggcttatgccctggaatg 81941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 81841 - 81954
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| |||||||||||||||  ||||||||| | |||||||||||||||||||||||| || |||||| ||  |||| |||||||||||| |||    
T  81841 gttgagggctcatgccctggaatgctttgtcattcaacc-gttgagggctcatgccctggaatgctcgtcattc-aaccgttgagggcttatgccctgga 81938  T
Q  115 atgcttagtcattcaa 130  Q
    |||| | |||||||||    
T  81939 atgccttgtcattcaa 81954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 94; Significance: 5e-46; HSPs: 7)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 11291 - 11440
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    |||||||||||||| ||||||||||||||||||||||||||  ||||||||| |||||||||||||||||| |||||||  |  ||||||||||||||||    
T  11291 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaaactgttgagggctcatgccttggaatgccttgtcattcaaattgttgg 11390  T
Q  99 gggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtacc 148  Q
    |||||||||||||||| ||||||||||||||||| |||| ||||||||||    
T  11391 gggcttatgccccggactgcttagtcattcaacgagttgaaaatagtacc 11440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 8811 - 8681
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttggg 99  Q
    |||||||||||||  |||||||||| ||||||||||||||||||||||||| | |||||||||| |||||||||||||  |  |||||||||||||||||    
T  8811 ctttgtcattcaattgttgagggctcatgccctggaatgctcgtcattcaacc-gttgagggcttatgccctggaatgccttgtcattcaaattgttggg 8713  T
Q  100 ggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||||||||||||||||||||||||||    
T  8712 ggcttatgccccggaatgcttagtcattcaac 8681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 8928 - 8799
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    ||||||||||||||||| |||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||  |  |||||| ||||||||     
T  8928 ctttgtcattcaaccgtggagggcttatgccctggaatgctttgtcattcaat-tgttgagggctcatgccctggaatgctttgtcattc-aattgttga 8831  T
Q  99 gggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||| |||||| ||||||||| |||||||||    
T  8830 gggctcatgccctggaatgctttgtcattcaa 8799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 11215 - 11342
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggg 100  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||| |||||||||||| |||||||||||||  |  |||||| || ||||| ||    
T  11215 ttgtcattcaaccgttgagggcttatgccctggaatgccttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttgagg 11312  T
Q  101 gcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||| ||||||||| |||||||||    
T  11313 gcttatgccctggaatgctttgtcattcaa 11342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 11254 - 11382
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggg 100  Q
    |||||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  ||||||||| ||||| ||    
T  11254 ttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattcaaactgttgagg 11352  T
Q  101 gcttatgccccggaatgcttagtcattcaa 130  Q
    ||| |||||  ||||||| | |||||||||    
T  11353 gctcatgccttggaatgccttgtcattcaa 11382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 131
Target Start/End: Original strand, 11189 - 11304
Alignment:
Q  16 gttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||||||||||||||||| || ||||||||| | |||||||||| |||||||||||||  |  |||||| || ||||| |||||||||||| ||    
T  11189 gttgagggcttatgccctggaatgccttgtcattcaa-ccgttgagggcttatgccctggaatgccttgtcattc-aactgttgagggcttatgccctgg 11286  T
Q  114 aatgcttagtcattcaac 131  Q
    ||||||| ||||||||||    
T  11287 aatgctttgtcattcaac 11304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 12 - 130
Target Start/End: Complemental strand, 8956 - 8838
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgcc 109  Q
    |||||||||||||| |||||||||||||| | ||||||||| | || ||||||| |||||||||||||  |  |||||| |||||||| ||||| |||||    
T  8956 aaccgttgagggctcatgccctggaatgctttgtcattcaa-ccgtggagggcttatgccctggaatgctttgtcattc-aattgttgagggctcatgcc 8859  T
Q  110 ccggaatgcttagtcattcaa 130  Q
    | ||||||||| |||||||||    
T  8858 ctggaatgctttgtcattcaa 8838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 93; Significance: 2e-45; HSPs: 3)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 129
Target Start/End: Complemental strand, 137596 - 137484
Alignment:
Q  18 tgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaat 116  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||    
T  137596 tgagggcttatgccctggaatgctttgtcattcaatctgttgagggctcatgccctggaatgatcattattcaaattgttgggggcttatgctccggaat 137497  T
Q  117 gcttagtcattca 129  Q
    |||||||||||||    
T  137496 gcttagtcattca 137484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 137714 - 137641
Alignment:
Q  18 tgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaa 90  Q
    ||||||||||| ||||||||||||  ||||||||||||||||||||||||||| |||||||| | |||||||||    
T  137714 tgagggcttattccctggaatgctttgtcattcaatctgttgagggctcatgctctggaatgttaatcattcaa 137641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 137692 - 137562
Alignment:
Q  1 ctttgtcattcaacc-gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgg 98  Q
    ||||||||||||| | |||||||||| |||| |||||||| |  |||||||| | |||||||||| ||||||| ||| |  |  || ||||||||| ||     
T  137692 ctttgtcattcaatctgttgagggctcatgctctggaatgttaatcattcaa-cagttgagggcttatgccctagaacgccttgtcgttcaaattggtga 137594  T
Q  99 gggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||| ||||||||| |||||||||    
T  137593 gggcttatgccctggaatgctttgtcattcaa 137562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 91; Significance: 3e-44; HSPs: 4)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 2251 - 2101
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggg 99  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||||||| | ||||||||||||||||||    
T  2251 ctttgtcattcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgtttatcattcaaattgttggg 2152  T
Q  100 ggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||| ||| ||||||||||||||||||| |  |||| |||| |||||||    
T  2151 ggcttaagcctcggaatgcttagtcattcagcacgttgaaaatggtaccac 2101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 9095 - 8945
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggg 99  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||||||  ||||||||||||||||||||||||| | ||||||||||||||||||    
T  9095 ctttgtcattcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctggaatgtttatcattcaaattgttggg 8996  T
Q  100 ggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||| ||| ||||||||||||||||||| |  |||| |||| |||||||    
T  8995 ggcttaagcctcggaatgcttagtcattcagcacgttgaaaatggtaccac 8945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 2275 - 2161
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| |||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| ||||| |||||| ||    
T  2275 gttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctgg 2177  T
Q  114 aatgcttagtcattcaa 130  Q
    |||| ||| ||||||||    
T  2176 aatgttta-tcattcaa 2161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 9119 - 9005
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| |||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| ||||| |||||| ||    
T  9119 gttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgccctgg 9021  T
Q  114 aatgcttagtcattcaa 130  Q
    |||| ||| ||||||||    
T  9020 aatgttta-tcattcaa 9005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 150
Target Start/End: Complemental strand, 10696 - 10549
Alignment:
Q  4 tgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggc 102  Q
    |||||||||||  |||||||||||||||||||||||| | ||||||||| || ||||||||||||||||||||||| | |||||||||||| ||||||||    
T  10696 tgtcattcaactattgagggcttatgccctggaatgccttgtcattcaaactattgagggctcatgccctggaatgtttatcattcaaattattgggggc 10597  T
Q  103 ttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||||||||||||||||| |||||||||  |||| |||| |||||||    
T  10596 ttatgccccggaatgcttactcattcaacacgttgaaaatggtaccac 10549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 10723 - 10609
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||||||||||| |||| | | ||||||||| || ||||||||| |||||||||||||  |  ||||||||| | ||| ||||| |||||| ||    
T  10723 gttgagggcttatgccctagaataccctgtcattcaa-ctattgagggcttatgccctggaatgccttgtcattcaaactattgagggctcatgccctgg 10625  T
Q  114 aatgcttagtcattcaa 130  Q
    |||| ||| ||||||||    
T  10624 aatgttta-tcattcaa 10609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 88; Significance: 2e-42; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 34940 - 35071
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggg 99  Q
    |||||||||||||| |||||||| ||||||||| |||||| | ||||||||| |||||||||||||||||||| ||||| | ||||||||||||||||||    
T  34940 ctttgtcattcaactgttgagggattatgccctagaatgccttgtcattcaaactgttgagggctcatgccctagaatgtttatcattcaaattgttggg 35039  T
Q  100 ggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||||||| ||||||||||||||||||    
T  35040 ggcttatgccccgaaatgcttagtcattcaac 35071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 34901 - 35011
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||| |||||||| |||||||||||||||| | ||||||||| |||||||||| | ||||||| |||||  |  ||||||||| |||||     
T  34901 ctttgtcattcaacagttgagggtttatgccctggaatgctttgtcattcaa-ctgttgagggattatgccctagaatgccttgtcattcaaactgttga 34999  T
Q  99 gggcttatgccc 110  Q
    ||||| ||||||    
T  35000 gggctcatgccc 35011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 78
Target Start/End: Original strand, 34877 - 34939
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||||||||||||| | ||||||||| | |||||||| | |||||||||||||    
T  34877 gttgagggcttatgccctggaatgctttgtcattcaa-cagttgagggtttatgccctggaatg 34939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 87; Significance: 8e-42; HSPs: 2)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 12 - 149
Target Start/End: Complemental strand, 1621 - 1484
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||    
T  1621 aaccgttgagggctcatgccctggaatgccttgtcattcaatctgttgagggctcatgccctggaatgttcatcattc-aattgctgggggcttatgccc 1523  T
Q  111 cggaatgcttagtcattcaacgtgttggaaatagtacca 149  Q
     ||||||||||||||||||||  |||| |||| ||||||    
T  1522 tggaatgcttagtcattcaacacgttgaaaatggtacca 1484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 1661 - 1594
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| |||||||||||||||  | ||||||| | ||||||||||||||||||||||||    
T  1661 aaccgttgagggctcatgccctggaatgctttgccattcaaaccgttgagggctcatgccctggaatg 1594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 86; Significance: 3e-41; HSPs: 3)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 5825 - 5680
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||  || ||||||||||||||||||||| ||  |||||||| |||||||||||||||||||||||||| | |||||| ||||||||||||||||    
T  5825 tcattcaattgtcgagggcttatgccctggaatgacttatcattcaaactgttgagggctcatgccctggaatgtttatcatttaaattgttgggggctt 5726  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||||||||||||||  |||| |||| |||||||    
T  5725 atgccccggaatgcttagtcattcaacacgttgaaaatggtaccac 5680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 5853 - 5752
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||||||||||| |  ||||||||| ||| ||||||| |||||||||||||| | |||||||||| ||||| ||||| |||||| |||    
T  5853 gttgagggctcatgccctggaatgttaatcattcaat-tgtcgagggcttatgccctggaatgacttatcattcaaactgttgagggctcatgccctgga 5755  T
Q  115 atg 117  Q
    |||    
T  5754 atg 5752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 117
Target Start/End: Complemental strand, 5855 - 5792
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatg 117  Q
    |||||||||||||||||||||||||| | ||||||| |||||| | |||||||||||| ||||||    
T  5855 ctgttgagggctcatgccctggaatgttaatcattc-aattgtcgagggcttatgccctggaatg 5792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 6 - 131
Target Start/End: Original strand, 4011 - 4137
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||  |||||||||||||||| |||||||| | ||||||||| | |||||||||||||||||||||||| | |||||||||||||||||||||||    
T  4011 tcattcaattgttgagggcttatgccatggaatgccttgtcattcaaaccgttgagggctcatgccctggaatgtttatcattcaaattgttgggggctt 4110  T
Q  105 atgccccggaatgcttagtcattcaac 131  Q
    |||||||| ||||||||||||||||||    
T  4111 atgccccgaaatgcttagtcattcaac 4137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 3939 - 4057
Alignment:
Q  12 aaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||||||||||||||||| || |||||| || | |||||||||||||||||||||||| | ||||||| |||||||| |||||||||||     
T  3939 aaccgttgagggcttatgccctggaatgccttgtcatttaaaccgttgagggctcatgccctggaatgtttatcattc-aattgttgagggcttatgcca 4037  T
Q  111 cggaatgcttagtcattcaa 130  Q
     ||||||| | |||||||||    
T  4038 tggaatgccttgtcattcaa 4057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: scaffold0635
Description:

Target: scaffold0635; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 18 - 150
Target Start/End: Complemental strand, 6836 - 6704
Alignment:
Q  18 tgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaat 116  Q
    ||||||||||||||||||||||| | ||||||||| ||||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||    
T  6836 tgagggcttatgccctggaatgccttgtcattcaa-ctgttgagggctcatgcccaggaatgtttatcattcaaattgttgggggcttatgccccggaat 6738  T
Q  117 gcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||||||||||| |  |||| |||| |||||||    
T  6737 gcttagtcattcatcacgttgaaaatggtaccac 6704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0635; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 78
Target Start/End: Complemental strand, 6812 - 6737
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||| |||||||||| |||||| |||||| |  ||||||||  ||||| ||||| |||||| ||||||    
T  6812 ttgtcattcaactgttgagggctcatgcccaggaatgtttatcattcaaattgttgggggcttatgccccggaatg 6737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 79; Significance: 5e-37; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 152
Target Start/End: Original strand, 134263 - 134401
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| |||||||||||||||  |||||||||   ||||||||||||||||||||||||  |  |||||||||||||||||||||||||||||||    
T  134263 gttgagggctcatgccctggaatgctatgtcattcaaatcgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccccgg 134362  T
Q  114 aatgcttagtcattcaacgtgttggaaatagtaccacgt 152  Q
    ||||||||||||||||||  |||| ||||||||||||||    
T  134363 aatgcttagtcattcaacccgttgaaaatagtaccacgt 134401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 134302 - 134366
Alignment:
Q  15 cgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||| ||||||||||||| || |||||||||  ||||| ||||| |||||| ||||||    
T  134302 cgttgagggctcatgccctggaatgccttgtcattcaaattgttgggggcttatgccccggaatg 134366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 79; Significance: 5e-37; HSPs: 4)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 59294 - 59146
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggg 99  Q
    |||||||||||| | |||||||||| |||| |||||||| |  ||||||||| |||||||||||||||||||||||||| | |||||| |||||||||||    
T  59294 ctttgtcattcacctgttgagggctcatgctctggaatgttttgtcattcaa-ctgttgagggctcatgccctggaatgtt-atcattaaaattgttggg 59197  T
Q  100 ggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||||||||||||||||||||||||||||||  |||| |||| |||||||    
T  59196 ggcttatgccccggaatgcttagtcattcaacacgttgaaaatggtaccac 59146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 12 - 129
Target Start/End: Complemental strand, 59401 - 59283
Alignment:
Q  12 aaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgcc 109  Q
    |||||||||||||||||||||||||||| || ||||||||| || |||||||||||||| ||||||||  |  |||||| || ||||| ||||| |||||    
T  59401 aaccgttgagggcttatgccctggaatgccttgtcattcaacctattgagggctcatgctctggaatgctttgtcattc-aactgttgagggctcatgcc 59303  T
Q  110 ccggaatgcttagtcattca 129  Q
    | ||||||||| ||||||||    
T  59302 ctggaatgctttgtcattca 59283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 59333 - 59256
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||| | ||||||||||||||||| ||||||||    
T  59333 ctttgtcattcaactgttgagggctcatgccctggaatgctttgtcattc-acctgttgagggctcatgctctggaatg 59256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 205344 - 205442
Alignment:
Q  16 gttgagggcttatgccctg-gaatgc-tcgtcattcaatctgttgagggctcatgccctg-gaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    ||||||||||||||||||| |||||| | |||||||||  |||||||||||||||||||| |||||  | |||||||||||||||| ||||| ||||||    
T  205344 gttgagggcttatgccctgtgaatgccttgtcattcaaattgttgagggctcatgccctgtgaatgtttaatcattcaaattgttgagggctcatgccc 205442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0825
Description:

Target: scaffold0825; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 6 - 150
Target Start/End: Original strand, 1873 - 2018
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||||||| ||||||| || |||||||||||||| | ||||||||| ||||||| |||||||||||||||||  | |||||||||||||||||||||||    
T  1873 tcattcaactgttgaggactgatgccctggaatgccttgtcattcaaactgttgatggctcatgccctggaatatttatcattcaaattgttgggggctt 1972  T
Q  105 atgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |  ||||||||||||||||||||||||  |||| |||| |||||||    
T  1973 acaccccggaatgcttagtcattcaacacgttgaaaatggtaccac 2018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0825; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 1805 - 1919
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||||||||  |||||||| | ||||||||| ||||||||||||||| |||| ||||| | ||||||| || ||||| || || |||||| |||    
T  1805 gttgagggcttatgcgttggaatgccttgtcattcaaactgttgagggctcataccctagaatgttaatcattc-aactgttgaggactgatgccctgga 1903  T
Q  115 atgcttagtcattcaa 130  Q
    |||| | |||||||||    
T  1904 atgccttgtcattcaa 1919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 75; Significance: 1e-34; HSPs: 6)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 50825 - 50696
Alignment:
Q  3 ttgtcattcaacc-gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggg 100  Q
    ||||||||||| | |||||||||||||||||| |||||||  ||||||||| |||||||||||| ||||||||||||| | ||||||||||||||| |||    
T  50825 ttgtcattcaaactgttgagggcttatgccctagaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgtttatcattcaaattgtttggg 50727  T
Q  101 gcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||||||||||||| |||||||||||    
T  50726 gcttatgccccggaatgctcagtcattcaac 50696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 131
Target Start/End: Complemental strand, 50900 - 50774
Alignment:
Q  9 ttcaaccgttgagggcttatgccctg-gaatgctcgt--cattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggctt 104  Q
    ||||| |||||||||||||||||||| |||||||     ||||||| |||||||||||||||||||| |||||  |  ||||||||| ||||| ||||||    
T  50900 ttcaatcgttgagggcttatgccctgtgaatgctttaaccattcaaactgttgagggctcatgcccttgaatgccttgtcattcaaactgttgagggctt 50801  T
Q  105 atgccccggaatgcttagtcattcaac 131  Q
    ||||||  |||||||| ||||||||||    
T  50800 atgccctagaatgctttgtcattcaac 50774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 50982 - 50877
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatg-ctcgtca-ttcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggct 103  Q
    ||||||||| |||||||||||||||||||||||| || |||| || || ||||||||||||||||||||| |||| | ||| ||| ||| |||| |||||    
T  50982 tcattcaactgttgagggcttatgccctggaatgccttgtcattttaaactgttgagggctcatgccctgaaatgtttatcgttc-aatcgttgagggct 50884  T
Q  104 tatgccc 110  Q
    |||||||    
T  50883 tatgccc 50877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 50787 - 50697
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatca-tcattcaa 90  Q
    |||||||||||||| |||||||||||||||||||||||| |  ||||||||  ||||  ||||| |||||| |||||| ||| ||||||||    
T  50787 ctttgtcattcaactgttgagggcttatgccctggaatgtttatcattcaaattgtttggggcttatgccccggaatgctcagtcattcaa 50697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 51014 - 50949
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| ||||||||||||| |  |||||||| |||||||||||| |||||||||||||    
T  51014 aaccgttgagggctcatgccctggaatgttaatcattcaa-ctgttgagggcttatgccctggaatg 50949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 55 - 127
Target Start/End: Complemental strand, 51010 - 50939
Alignment:
Q  55 gttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcatt 127  Q
    |||||||||||||||||||||||| | ||||||| || ||||| |||||||||||| ||||||| | ||||||    
T  51010 gttgagggctcatgccctggaatgttaatcattc-aactgttgagggcttatgccctggaatgccttgtcatt 50939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276 (Bit Score: 74; Significance: 5e-34; HSPs: 2)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 53 - 150
Target Start/End: Complemental strand, 209 - 112
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||  |||| ||| ||||||||    
T  209 ctgttgagggctcatgccctggaatgttcatcattcaaattgttgggggctcatgccccggaatgcttagtcattcaacacgttgaaaacagtaccac 112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1276; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 78
Target Start/End: Complemental strand, 207 - 145
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||| ||||||||||||| || ||||||||  ||||| |||||||||||| ||||||    
T  207 gttgagggctcatgccctggaatgttcatcattcaaattgttgggggctcatgccccggaatg 145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 73; Significance: 2e-33; HSPs: 6)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 20919 - 20783
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||  |  ||||||||||||||| ||||| ||||||||     
T  20919 gttgagggcttatgccctggaatgccttgtcattcaaactgttgagggctcatgccctggaatgccttgtcattcaaattgttgagggctcatgccccga 20820  T
Q  114 aatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||||||||||||||||  |||| |||| |||||||    
T  20819 aatgcttagtcattcaacacgttgaaaatggtaccac 20783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 130
Target Start/End: Complemental strand, 21048 - 20923
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggctt 104  Q
    ||||| ||| |||||||| |||||||||||||||| | |||||||||  ||||||||| ||||||||||||||| | |||||||||| ||||| ||  ||    
T  21048 tcatttaactgttgagggtttatgccctggaatgccttgtcattcaaattgttgagggttcatgccctggaatgtttatcattcaaactgttgaggattt 20949  T
Q  105 atgccccggaatgcttagtcattcaa 130  Q
    |||||| ||||||| | |||||||||    
T  20948 atgccctggaatgccttgtcattcaa 20923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 23996 - 23861
Alignment:
Q  17 ttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgga 114  Q
    ||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||| |||||  |  ||||||||| | ||| ||||| ||||||  ||    
T  23996 ttgagggcttatgccctagaatgccttgtcattcaaactgttgagggctcatgccctagaatgccttgtcattcaaactattgagggctcatgccctaga 23897  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||||  |||| |||| |||||||    
T  23896 atgcttagtcattcaacacgttgaaaatggtaccac 23861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 130
Target Start/End: Complemental strand, 20998 - 20883
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||| | ||||||||||||| |  |||||||| |||||||||  | |||||||||||||  |  ||||||||||||||| |||||||||||| |||    
T  20998 gttgagggttcatgccctggaatgtttatcattcaaactgttgaggatttatgccctggaatgccttgtcattcaaattgttgagggcttatgccctgga 20899  T
Q  115 atgcttagtcattcaa 130  Q
    |||| | |||||||||    
T  20898 atgccttgtcattcaa 20883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 24026 - 23961
Alignment:
Q  65 catgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||||| | |||||||||| | ||| ||||||||||||  |||||| | |||||||||    
T  24026 catgccctggaatgtttatcattcaaactattgagggcttatgccctagaatgccttgtcattcaa 23961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 24025 - 23921
Alignment:
Q  27 atgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccggaatgcttagtca 125  Q
    ||||||||||||| |  |||||||| || ||||||||| ||||||| |||||  |  ||||||||| ||||| ||||| ||||||  |||||| | ||||    
T  24025 atgccctggaatgtttatcattcaaactattgagggcttatgccctagaatgccttgtcattcaaactgttgagggctcatgccctagaatgccttgtca 23926  T
Q  126 ttcaa 130  Q
    |||||    
T  23925 ttcaa 23921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0447
Description:

Target: scaffold0447; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 14026 - 13893
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||  | ||||||||||||||||||| ||||||||||| |    
T  14026 gttgagggctcatgccttggaatgcattgtcattcaa-ctgttgagggctcatgccctggaatatttatcattcaaattgttgggg-cttatgccccgaa 13929  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||||||||||||||| ||||| |||| |||||||    
T  13928 atgcttagtcattcaacatgttgaaaatggtaccac 13893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0447; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 14122 - 14050
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctg-gaatgctcgt-cattcaatctgttgagggctcatgccctg 73  Q
    ||||| |||||  ||||||||||||||||||| ||||| | || ||||||| | |||||||||||||||||||    
T  14122 ttgtcgttcaattgttgagggcttatgccctgtgaatggtagttcattcaaaccgttgagggctcatgccctg 14050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 12021 - 11888
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    |||||||||| ||||| |||||||| | ||||||||| |||||||||||||||||||||||||  | ||||||||||||||||||| ||||||||||| |    
T  12021 gttgagggctcatgccttggaatgcattgtcattcaa-ctgttgagggctcatgccctggaatatttatcattcaaattgttgggg-cttatgccccgaa 11924  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||||||||||||||| ||||| |||| |||||||    
T  11923 atgcttagtcattcaacatgttgaaaatggtaccac 11888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 12117 - 12045
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctg-gaatgctcgt-cattcaatctgttgagggctcatgccctg 73  Q
    ||||| |||||  ||||||||||||||||||| ||||| | || ||||||| | |||||||||||||||||||    
T  12117 ttgtcgttcaattgttgagggcttatgccctgtgaatggtagttcattcaaaccgttgagggctcatgccctg 12045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 72; Significance: 7e-33; HSPs: 5)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 13174 - 13296
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggg 99  Q
    |||||||||||| | ||||| ||||||||||||||||||||  ||||||||| |||||||||||| ||||||||||||| | ||||||||||||||| ||    
T  13174 ctttgtcattcatctgttgacggcttatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgtttatcattcaaattgtttgg 13272  T
Q  100 ggcttatgccccggaatgcttagt 123  Q
    |||||||||||| |||||||||||    
T  13273 ggcttatgccccagaatgcttagt 13296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 12504 - 12623
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||||||||||||| |||||||| | ||||||||| |||||||||||||||||||||||||| | |||||||||| ||||| ||||||||||||    
T  12504 aaccgttgagggcttatgccttggaatgccttgtcattcaaactgttgagggctcatgccctggaatgtttatcattcaaactgttgagggcttatgccc 12603  T
Q  111 cggaatgcttagtcattcaa 130  Q
     | ||||| | |||||||||    
T  12604 tgaaatgccttgtcattcaa 12623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 119
Target Start/End: Original strand, 12587 - 12690
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccgga 114  Q
    ||||||||||||||||||| ||||| | ||||||||| |||||||||||||||||||||||||| | ||||||| |||||||| |||||||||||| |||    
T  12587 gttgagggcttatgccctgaaatgccttgtcattcaaactgttgagggctcatgccctggaatgtttatcattc-aattgttgagggcttatgccctgga 12685  T
Q  115 atgct 119  Q
    |||||    
T  12686 atgct 12690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 129
Target Start/End: Original strand, 13056 - 13185
Alignment:
Q  3 ttgtcattcaa-ccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttggg 99  Q
    ||||||||||| || |||||||||||||||||||||||| |||| |||||| |||||||||||| |||||||||||||  |  |||||||||  | || |    
T  13056 ttgtcattcaaaccattgagggcttatgccctggaatgcctcgtgattcaaactgttgagggcttatgccctggaatgccttgtcattcaaaccgctgag 13155  T
Q  100 ggcttatgccccggaatgcttagtcattca 129  Q
    ||||||||||| | ||||||| ||||||||    
T  13156 ggcttatgccctgaaatgctttgtcattca 13185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 13030 - 13146
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||||||||| ||||  || | ||||||||| |  ||||||||| |||||||||||||  || | ||||||| ||||| |||||||||||| ||    
T  13030 gttgagggcttatgccttggatagccttgtcattcaaaccattgagggcttatgccctggaatgcctcgtgattcaaactgttgagggcttatgccctgg 13129  T
Q  114 aatgcttagtcattcaa 130  Q
    ||||| | |||||||||    
T  13130 aatgccttgtcattcaa 13146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395 (Bit Score: 71; Significance: 3e-32; HSPs: 3)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 130
Target Start/End: Original strand, 8998 - 9112
Alignment:
Q  16 gttgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaa 115  Q
    |||||||||| |||||||||||||    ||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  8998 gttgagggctcatgccctggaatgaaaatcattcaaaatgttgagggctcatgccctggaatgttcatcattcaaattgttgggggcttaagccccggaa 9097  T
Q  116 tgcttagtcattcaa 130  Q
     ||| ||||||||||    
T  9098 agctcagtcattcaa 9112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 8961 - 9060
Alignment:
Q  18 tgagggcttatgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatg 117  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||  |||||||||| ||||| ||||| |||||| ||||||    
T  8961 tgagggcttatgccctggaatgcctttcattcaatctgttgagggctcatgccctggaatgaaaatcattcaaaatgttgagggctcatgccctggaatg 9060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0395; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 8921 - 9021
Alignment:
Q  18 tgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaat 116  Q
    |||||||| |||||||| ||||||  |||||||||  || |||||||| |||||||||||||    ||||||||  ||||| ||||| |||||| |||||    
T  8921 tgagggctcatgccctgaaatgctttgtcattcaaattggtgagggcttatgccctggaatgcctttcattcaatctgttgagggctcatgccctggaat 9020  T
Q  117 g 117  Q
    |    
T  9021 g 9021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 69; Significance: 4e-31; HSPs: 2)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 14026 - 14162
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||||||||||||||||||||||| | |||||||||  ||||||||||| |||||||||||||  |  ||||||||||||||| |||||||||||| ||    
T  14026 gttgagggcttatgccctggaatgccttgtcattcaaattgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggcttatgccctgg 14125  T
Q  114 aatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||||||||||||||||  |||| |||| |||||||    
T  14126 aatgcttagtcattcaacacgttgaaaattgtaccac 14162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 12 - 130
Target Start/End: Original strand, 13982 - 14102
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgcc 109  Q
    ||||||||||||||||||||||||||||| | |||||||||  ||||||||||| |||||||||||||  |  ||||||||||||||| |||||||||||    
T  13982 aaccgttgagggcttatgccctggaatgctttgtcattcaaattgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggcttatgcc 14081  T
Q  110 ccggaatgcttagtcattcaa 130  Q
    | ||||||| | |||||||||    
T  14082 ctggaatgccttgtcattcaa 14102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 40238 - 40369
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttggg 99  Q
    |||||||||||||| ||||||||||||  ||||||||||| | ||||||||| ||||| |||||||||||||||||||| | ||||||||||||||||||    
T  40238 ctttgtcattcaactgttgagggcttactccctggaatgccttgtcattcaaactgttaagggctcatgccctggaatgtttatcattcaaattgttggg 40337  T
Q  100 ggcttatgccccggaatgcttagtcattcaac 131  Q
    |||||| | ||| ||||| |  ||||||||||    
T  40338 ggcttaaggcccagaatgttatgtcattcaac 40369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 40160 - 40237
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| ||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||    
T  40160 ctttgtcattcaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatg 40237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 40137 - 40251
Alignment:
Q  17 ttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgga 114  Q
    ||||||||| |||||||||||||| | ||||||||| |||||||||||| |||||||||||||  |  |||||| || ||||| ||||| |||||| |||    
T  40137 ttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgctttgtcattc-aactgttgagggctcatgccctgga 40234  T
Q  115 atgcttagtcattcaac 131  Q
    |||||| ||||||||||    
T  40235 atgctttgtcattcaac 40251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 40199 - 40328
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||| |||||||||| |||||||||||||| | ||||||||| |||||||||||| |  ||||||||||  |  ||||||||| ||||      
T  40199 ctttgtcattcaactgttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggcttactccctggaatgccttgtcattcaaactgttaa 40297  T
Q  99 gggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||| |||||| |||||| ||| ||||||||    
T  40298 gggctcatgccctggaatgttta-tcattcaa 40328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500 (Bit Score: 65; Significance: 1e-28; HSPs: 3)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 16 - 150
Target Start/End: Original strand, 11768 - 11903
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgg 113  Q
    |||||||||| |||||||||||||||  ||||||||| |||||||||||| |||||||||||||  |  ||||||||||||||| |||||||||||| ||    
T  11768 gttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggcttatgccctgg 11866  T
Q  114 aatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    ||||||||||||||||||  |||| |||| |||||||    
T  11867 aatgcttagtcattcaacacgttgaaaattgtaccac 11903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 131
Target Start/End: Original strand, 11684 - 11805
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgcc 109  Q
    ||||||||||||||||||||||||||||||  |||||||||  ||||||||||| |||||||||||||  |  ||||||||||||||| ||||| |||||    
T  11684 aaccgttgagggcttatgccctggaatgctttgtcattcaaattgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcatgcc 11783  T
Q  110 ccggaatgcttagtcattcaac 131  Q
    | ||||||||| ||||||||||    
T  11784 ctggaatgctttgtcattcaac 11805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0500; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 11792 - 11870
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| |||||||||||||||||||||||| || |||||||||  ||||||||||| |||||||||||||    
T  11792 ctttgtcattcaactgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggcttatgccctggaatg 11870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0860 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0860
Description:

Target: scaffold0860; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 280 - 151
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggg 100  Q
    ||||||| |||| |||||||||| |||||||||||||||  ||||||||| || ||||||| |||||||||||||||  |  ||||||||||||||| ||    
T  280 ttgtcatccaactgttgagggctcatgccctggaatgctttgtcattcaa-ctattgagggatcatgccctggaatgtcttgtcattcaaattgttgagg 182  T
Q  101 gcttatgccccggaatgcttagtcattcaac 131  Q
    |||||||||| ||||||||||||||||||||    
T  181 gcttatgccctggaatgcttagtcattcaac 151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0860; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 321 - 244
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||| |||| |||||||||||||||||||| ||| || ||||| ||| ||||||||||||||||||||||||||    
T  321 ctttgtcatccaactgttgagggcttatgccctgggatgccttgtcatccaa-ctgttgagggctcatgccctggaatg 244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0860; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 243 - 165
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||||||||  ||||||| | ||||||||||||| || |||||||||  ||||||||||| |||||||||||||    
T  243 ctttgtcattcaactattgagggatcatgccctggaatgtcttgtcattcaaattgttgagggcttatgccctggaatg 165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 63; Significance: 2e-27; HSPs: 5)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 131
Target Start/End: Complemental strand, 4445 - 4316
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggg 100  Q
    ||||||| ||||  ||||||||| |||||||||||||||  ||||||||| ||||||||||||||||||||||||||  |  ||||||||||||||| ||    
T  4445 ttgtcatccaactattgagggctaatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccctggaatgccttgtcattcaaattgttgagg 4347  T
Q  101 gcttatgccccggaatgcttagtcattcaac 131  Q
    |||| ||||| ||||||||||||||||||||    
T  4346 gcttgtgccctggaatgcttagtcattcaac 4316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 4408 - 4330
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| |||||||||| ||||||||||||| || |||||||||  |||||||||||  ||||||||||||    
T  4408 ctttgtcattcaactgttgagggctcatgccctggaatgccttgtcattcaaattgttgagggcttgtgccctggaatg 4330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4525 - 4452
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctgg 74  Q
    ||||||||| |||| ||||||||||||||||||||||||| | ||||||||| |||||| ||||| |||||||||    
T  4525 ctttgtcatccaactgttgagggcttatgccctggaatgctttgtcattcaa-ctgttgcgggcttatgccctgg 4452  T

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Target: scaffold0609; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 4486 - 4357
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgg 98  Q
    |||||||||||||| |||| ||||||||||||||| ||| || ||||| ||| || ||||||||| |||||||||||||  |  |||||| || |||||     
T  4486 ctttgtcattcaactgttgcgggcttatgccctgggatgccttgtcatccaa-ctattgagggctaatgccctggaatgctttgtcattc-aactgttga 4389  T
Q  99 gggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||| |||||| ||||||| | |||||||||    
T  4388 gggctcatgccctggaatgccttgtcattcaa 4357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 4548 - 4487
Alignment:
Q  17 ttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||||| |||||||||||||||  ||||| ||| |||||||||||| |||||||||||||    
T  4548 ttgagggctcatgccctggaatgctttgtcatccaa-ctgttgagggcttatgccctggaatg 4487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 131
Target Start/End: Original strand, 223630 - 223743
Alignment:
Q  18 tgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaat 116  Q
    |||||||| |||||||||||||||  |||||||||| ||||||||| | ||||| ||||||| | ||||||||||||||||||||||| || ||| ||||    
T  223630 tgagggctcatgccctggaatgctttgtcattcaat-tgttgaggggttatgccatggaatgtttatcattcaaattgttgggggcttgtgtcccagaat 223728  T
Q  117 gcttagtcattcaac 131  Q
    |||||||||||||||    
T  223729 gcttagtcattcaac 223743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1098 (Bit Score: 52; Significance: 6e-21; HSPs: 3)
Name: scaffold1098
Description:

Target: scaffold1098; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 1180 - 1045
Alignment:
Q  17 ttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatga-tcatcattcaaattgttgggggcttatgccccgga 114  Q
    ||||||||||||||||| |||||| | ||||||||| |||||||||||||||||||| |||||  |  ||||||||| | ||| ||||| ||||||  ||    
T  1180 ttgagggcttatgccctagaatgccttgtcattcaaactgttgagggctcatgccctagaatgccttgtcattcaaacttttgagggctcatgccctaga 1081  T
Q  115 atgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||||  |||| |||| |||||||    
T  1080 atgcttagtcattcaacacgttgaaaatggtaccac 1045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1098; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 65 - 130
Target Start/End: Complemental strand, 1210 - 1145
Alignment:
Q  65 catgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    |||||||||||||| | |||||||||| | ||| ||||||||||||  |||||| | |||||||||    
T  1210 catgccctggaatgtttatcattcaaactattgagggcttatgccctagaatgccttgtcattcaa 1145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1098; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 130
Target Start/End: Complemental strand, 1209 - 1105
Alignment:
Q  27 atgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccggaatgcttagtca 125  Q
    ||||||||||||| |  |||||||| || ||||||||| ||||||| |||||  |  ||||||||| ||||| ||||| ||||||  |||||| | ||||    
T  1209 atgccctggaatgtttatcattcaaactattgagggcttatgccctagaatgccttgtcattcaaactgttgagggctcatgccctagaatgccttgtca 1110  T
Q  126 ttcaa 130  Q
    |||||    
T  1109 ttcaa 1105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 55 - 155
Target Start/End: Complemental strand, 10542 - 10442
Alignment:
Q  55 gttgagggctcatgccctggaatgatca-tcattcaaattgttgggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccacgtc 153  Q
    |||||||||||||||||||||||| |   |||||||| | |||| ||||| ||||||||||||||||||||||||||||||||| |||||  ||||||||    
T  10542 gttgagggctcatgccctggaatgctttgtcattcaact-gttgagggctcatgccccggaatgcttagtcattcaacgtgttgaaaataagaccacgtc 10444  T
Q  154 gt 155  Q
    ||    
T  10443 gt 10442  T

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Target: scaffold0491; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 12 - 78
Target Start/End: Complemental strand, 10546 - 10480
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| |||||||||||||| | ||||||||| ||||||||||||||||||| ||||||    
T  10546 aaccgttgagggctcatgccctggaatgctttgtcattcaa-ctgttgagggctcatgccccggaatg 10480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10518 - 10478
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatgct 41  Q
    |||||||||||||| |||||||||| |||||| ||||||||    
T  10518 ctttgtcattcaactgttgagggctcatgccccggaatgct 10478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 53 - 101
Target Start/End: Original strand, 15731 - 15779
Alignment:
Q  53 ctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  15731 ctgttgagggctcatgccctggaatgatcatcattcaaattgttggggg 15779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 48; Significance: 1e-18; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 1481 - 1414
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcat 67  Q
    ||||||||||||||||||||||||||||||||||||||| || |||||||||  ||||||||||||||    
T  1481 ctttgtcattcaaccgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggctcat 1414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 12 - 103
Target Start/End: Complemental strand, 1509 - 1417
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggct 103  Q
    |||||||||||||| |||||||||||||| | ||||||||| | |||||||||| |||||||||||||  |  ||||||||||||||| |||||    
T  1509 aaccgttgagggctcatgccctggaatgctttgtcattcaa-ccgttgagggcttatgccctggaatgccttgtcattcaaattgttgagggct 1417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 47; Significance: 6e-18; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 71
Target Start/End: Original strand, 165648 - 165714
Alignment:
Q  6 tcattcaaccgttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccc 71  Q
    ||||||||| ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||    
T  165648 tcattcaactgttgagggcttatgccctggaatgcattgtcattcaaactgttgagggctcatgccc 165714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 110
Target Start/End: Original strand, 165631 - 165714
Alignment:
Q  27 atgccctggaatgctcgtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    ||||||||||||| |  |||||||| |||||||||||| ||||||||||||| ||  ||||||||| ||||| ||||| ||||||    
T  165631 atgccctggaatgttaatcattcaa-ctgttgagggcttatgccctggaatgcattgtcattcaaactgttgagggctcatgccc 165714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 165629 - 165694
Alignment:
Q  64 tcatgccctggaatgatcatcattcaaattgttgggggcttatgccccggaatgcttagtcattcaa 130  Q
    ||||||||||||||| | ||||||||| | |||| |||||||||||| ||||||| | |||||||||    
T  165629 tcatgccctggaatgttaatcattcaact-gttgagggcttatgccctggaatgcattgtcattcaa 165694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 45; Significance: 9e-17; HSPs: 3)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 9710 - 9638
Alignment:
Q  1 ctttgtcattcaaccgttgagggcttatgccctggaatg-ctcgtcattcaatctgttgagggctcatgccct 72  Q
    |||||||||| |||||||||||||| ||||||||||||| || ||||||||| | ||||||||||||||||||    
T  9710 ctttgtcattaaaccgttgagggctcatgccctggaatgccttgtcattcaaaccgttgagggctcatgccct 9638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 85 - 131
Target Start/End: Complemental strand, 9608 - 9562
Alignment:
Q  85 attcaaattgttgggggcttatgccccggaatgcttagtcattcaac 131  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  9608 attcaaattgttgggggcttatgccccagaatgcctagtcattcaac 9562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 131
Target Start/End: Complemental strand, 9734 - 9618
Alignment:
Q  16 gttgagggcttatgccctggaatgctc-gtcattcaatctgttgagggctcatgccctggaatg-atcatcattcaaattgttgggggcttatgccccgg 113  Q
    ||||| |||| |||||||||||||||  |||||| || | ||||||||||||||||||||||||  |  |||||||||  |||| ||||| ||||||  |    
T  9734 gttgacggctcatgccctggaatgctttgtcattaaacc-gttgagggctcatgccctggaatgccttgtcattcaaaccgttgagggctcatgcccttg 9636  T
Q  114 aatgcttagtcattcaac 131  Q
     |||||| ||||||||||    
T  9635 tatgctttgtcattcaac 9618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 150
Target Start/End: Complemental strand, 120082 - 120016
Alignment:
Q  84 cattcaaattgttgggggcttatgccccggaatgcttagtcattcaacgtgttggaaatagtaccac 150  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||||  |||| |||| |||||||    
T  120082 cattcaaattgttgggggctcatgccccagaatgctcagtcattcaacacgttgaaaatggtaccac 120016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 15 - 130
Target Start/End: Original strand, 21806 - 21926
Alignment:
Q  15 cgttgagggcttatgccctgg-aatgctcgt-cattcaatctgttgagggctcatgccctg-gaatg--atcatcattcaaattgttgggggcttatgcc 109  Q
    ||||||||||||||||||||  |||||| || ||||||| | ||||||||||||||||||| |||||   | | |||||||| ||||| ||||| |||||    
T  21806 cgttgagggcttatgccctgttaatgctagttcattcaaaccgttgagggctcatgccctgtgaatgctttaaccattcaaactgttgagggctcatgcc 21905  T
Q  110 ccggaatgcttagtcattcaa 130  Q
    | ||||||||| |||||||||    
T  21906 ctggaatgctttgtcattcaa 21926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 12 - 78
Target Start/End: Original strand, 21844 - 21913
Alignment:
Q  12 aaccgttgagggcttatgccctg-gaatgctcgt--cattcaatctgttgagggctcatgccctggaatg 78  Q
    |||||||||||||| |||||||| |||||||     ||||||| ||||||||||||||||||||||||||    
T  21844 aaccgttgagggctcatgccctgtgaatgctttaaccattcaaactgttgagggctcatgccctggaatg 21913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 7186 - 7089
Alignment:
Q  16 gttgagggcttatgccctg-gaatgc-tcgtcattcaatctgttgagggctcatgccctg-gaatgatca-tcattcaaattgttgggggcttatgccc 110  Q
    ||||||||||||||||||| |||||| | ||| ||||| ||||||||||||||||||||| ||||| | | ||||||||||||||| ||||| ||||||    
T  7186 gttgagggcttatgccctgtgaatgccttgtcgttcaa-ctgttgagggctcatgccctgtgaatgcttaatcattcaaattgttgagggctcatgccc 7089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 73
Target Start/End: Complemental strand, 7159 - 7087
Alignment:
Q  3 ttgtcattcaaccgttgagggcttatgccctg-gaatgctcg-tcattcaatctgttgagggctcatgccctg 73  Q
    ||||| |||||| |||||||||| |||||||| |||||||   ||||||||  ||||||||||||||||||||    
T  7159 ttgtcgttcaactgttgagggctcatgccctgtgaatgcttaatcattcaaattgttgagggctcatgccctg 7087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 73
Target Start/End: Complemental strand, 33690 - 33623
Alignment:
Q  8 attcaaccgttgagggcttatgccctg-gaatgctcgt-cattcaatctgttgagggctcatgccctg 73  Q
    ||||||| |||||||||| |||||||| ||||||| || |||||||  ||||||||||||||||||||    
T  33690 attcaactgttgagggctcatgccctgtgaatgctagttcattcaaattgttgagggctcatgccctg 33623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 20818 - 20731
Alignment:
Q  20 agggcttatgccctg-gaatgc-tcgtcattcaatctgttgagggctcatgccctg-gaatg-atcatcattcaaattgttgggggct 103  Q
    |||||||||||| || |||||| |||||||||||  |||||||||||||||||||| |||||  | |||||||||||||||| |||||    
T  20818 agggcttatgccttgtgaatgcctcgtcattcaaattgttgagggctcatgccctgtgaatgcttaatcattcaaattgttgagggct 20731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 29349 - 29418
Alignment:
Q  43 gtcattcaatctgttgagggctcatgccctg-gaatg-atcatcattcaaattgttgggggcttatgccc 110  Q
    |||||||||  |||||||||||||||||||| |||||  | |||||||||||||||| ||||| ||||||    
T  29349 gtcattcaaattgttgagggctcatgccctgtgaatgcttaatcattcaaattgttgagggctcatgccc 29418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 72
Target Start/End: Original strand, 2812 - 2869
Alignment:
Q  16 gttgagggcttatgccctggaatgc-tcgtcattcaatctgttgagggctcatgccct 72  Q
    |||||||||| |||||||||||||| |  |||||| | ||||||||||||||||||||    
T  2812 gttgagggctcatgccctggaatgcttaatcattccaactgttgagggctcatgccct 2869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 45 - 78
Target Start/End: Complemental strand, 34522 - 34489
Alignment:
Q  45 cattcaatctgttgagggctcatgccctggaatg 78  Q
    ||||||| ||||||||||||||||||||||||||    
T  34522 cattcaaactgttgagggctcatgccctggaatg 34489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0607 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0607
Description:

Target: scaffold0607; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 12 - 40
Target Start/End: Complemental strand, 2770 - 2742
Alignment:
Q  12 aaccgttgagggcttatgccctggaatgc 40  Q
    |||||||||||||||||||||||||||||    
T  2770 aaccgttgagggcttatgccctggaatgc 2742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0388 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 73
Target Start/End: Original strand, 16151 - 16215
Alignment:
Q  11 caaccgttgagggcttatgccctg-gaatgctcg-tcattcaatctgttgagggctcatgccctg 73  Q
    |||| ||||||||||||||||||| ||||||| | ||||||||  ||||||| ||||||||||||    
T  16151 caactgttgagggcttatgccctgtgaatgctagttcattcaaattgttgagtgctcatgccctg 16215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Complemental strand, 5379 - 5316
Alignment:
Q  8 attcaaccgttgagggcttatgccctg-gaatgctcg-tcattcaatctgttgagggctcatgcc 70  Q
    ||||||| |||||||||| |||||||| ||||||| | ||||||||| |||||||||||||||||    
T  5379 attcaactgttgagggctcatgccctgtgaatgctagatcattcaat-tgttgagggctcatgcc 5316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 8704 - 8649
Alignment:
Q  19 gagggcttatgccctg-gaatgctcgt-cattcaatctgttgagggctcatgccctg 73  Q
    |||||||||||||||| |||||||||| |||||||| || |||||||||||||||||    
T  8704 gagggcttatgccctgtgaatgctcgttcattcaat-tggtgagggctcatgccctg 8649  T

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Target: scaffold0149 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 70
Target Start/End: Original strand, 28096 - 28159
Alignment:
Q  8 attcaaccgttgagggcttatgccctg-gaatgctcg-tcattcaatctgttgagggctcatgcc 70  Q
    ||||||| |||||||||| |||||||| ||||||| | ||||||||| |||||||||||||||||    
T  28096 attcaactgttgagggctcatgccctgtgaatgctagatcattcaat-tgttgagggctcatgcc 28159  T

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