View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20593_low_33 (Length: 221)
Name: NF20593_low_33
Description: NF20593
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20593_low_33 |
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Alignment Details
Target: chr7 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 209
Target Start/End: Original strand, 5742297 - 5742506
Alignment:
| Q |
1 |
tacaatgaacacagcatacacccatctgtttcacataatataggcgtggaagtaactaactaatgatttacctannnnnnn-accttgagattactgttg |
99 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
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| T |
5742297 |
tacaatgaacacagcatacacccatctgtttcacataatataggcgtggaagtaactaactaatgatttacctattttttttaccttgagattactgttg |
5742396 |
T |
|
| Q |
100 |
aaactgtcattactaaaataaatgattactacctaaccatatttaaaaattaacataagtggctgctgatcaaatcaaaatttggcttctagttccatat |
199 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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|
| T |
5742397 |
aaactgtcattactaaaataaatgattactacctaaccatatttaaaaattaacataagtggctgctgatcaaatcaagatttggcttctagttccatat |
5742496 |
T |
|
| Q |
200 |
tttatatatt |
209 |
Q |
| |
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|||||||||| |
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|
| T |
5742497 |
tttatatatt |
5742506 |
T |
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