View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20594_high_19 (Length: 407)
Name: NF20594_high_19
Description: NF20594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20594_high_19 |
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Alignment Details
Target: chr7 (Bit Score: 357; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 357; E-Value: 0
Query Start/End: Original strand, 1 - 397
Target Start/End: Original strand, 37128807 - 37129203
Alignment:
| Q |
1 |
aataggtttttcattatattattggttgtcaaacctatatatgcctgccaattcgtagaaggagccgaacgcaagtgaaattttcagcccattatcctta |
100 |
Q |
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| T |
37128807 |
aataggtttttcattatattattggttgtcaaaccaatatatgcctgccaattcgtagaaggagccgaacgcaagtgaaattttcagcccattatcctta |
37128906 |
T |
|
| Q |
101 |
ggcaattgctttatcgactcttcatttttactcaaaagctctcaatttatcaaaatgtatctttcgatgacacagatctattggaatggagtattttcag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| |
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| T |
37128907 |
ggcaattgctttatcgactcttcatttttactcaaaagctctcaatttatcaaaatgtatctttcgataacacaaatctattggaatggagtattttcag |
37129006 |
T |
|
| Q |
201 |
attgacttatttttactatccatcaaaaactattttttgatcgacannnnnnnncagggttgagcgacctaagaacctaaagaacaaccttattatcctt |
300 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37129007 |
attgatttatttttactatccatcaaaaactattttttgatcgacattttttttcagggttgagcgacctaagaacctaaagaacaaccttattatcctt |
37129106 |
T |
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| Q |
301 |
atcaattcatgctatgtttcaggctaatttaagagggtccctgttaacccattttagcatcccctactcataagagcatttttttctacccatcaga |
397 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37129107 |
atcaattcatgctatgtttcaggctaatttaagagggtccctgttaacccattttagcatcccctactcataagagcatttttttctacccatcaga |
37129203 |
T |
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