View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20594_low_2 (Length: 738)

Name: NF20594_low_2
Description: NF20594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20594_low_2
NF20594_low_2
[»] chr4 (38 HSPs)
chr4 (180-491)||(10125761-10126071)
chr4 (1-181)||(10125299-10125479)
chr4 (558-720)||(10126444-10126606)
chr4 (297-429)||(52983677-52983815)
chr4 (291-430)||(45787704-45787849)
chr4 (297-392)||(25969545-25969639)
chr4 (297-430)||(34844758-34844897)
chr4 (297-430)||(40058852-40058991)
chr4 (297-392)||(20566408-20566504)
chr4 (297-430)||(27528795-27528934)
chr4 (303-392)||(13716493-13716583)
chr4 (291-366)||(18875586-18875661)
chr4 (297-431)||(34723857-34723997)
chr4 (297-430)||(5609202-5609341)
chr4 (297-430)||(32986255-32986394)
chr4 (297-366)||(12500128-12500197)
chr4 (297-363)||(37455635-37455700)
chr4 (297-428)||(20077986-20078123)
chr4 (202-291)||(25852215-25852304)
chr4 (297-392)||(32990493-32990589)
chr4 (193-242)||(52983611-52983660)
chr4 (311-359)||(9646293-9646341)
chr4 (202-278)||(42245747-42245823)
chr4 (299-392)||(13584297-13584391)
chr4 (336-430)||(19660532-19660631)
chr4 (297-363)||(25852272-25852338)
chr4 (299-362)||(41085086-41085149)
chr4 (297-366)||(9517711-9517780)
chr4 (297-366)||(32942428-32942497)
chr4 (293-366)||(33992680-33992753)
chr4 (297-359)||(39288917-39288978)
chr4 (315-392)||(55961797-55961874)
chr4 (205-242)||(4911926-4911963)
chr4 (193-242)||(46714384-46714433)
chr4 (315-430)||(46714469-46714590)
chr4 (205-242)||(51535617-51535654)
chr4 (297-392)||(54127385-54127481)
chr4 (202-291)||(54127449-54127538)
[»] chr5 (27 HSPs)
chr5 (298-392)||(19145455-19145549)
chr5 (297-430)||(38684266-38684404)
chr5 (297-430)||(19456211-19456348)
chr5 (297-430)||(27498731-27498870)
chr5 (297-430)||(8484661-8484800)
chr5 (297-430)||(15641106-15641244)
chr5 (298-430)||(7085626-7085764)
chr5 (297-430)||(11926501-11926641)
chr5 (297-392)||(32059483-32059579)
chr5 (297-391)||(15931117-15931211)
chr5 (297-430)||(18207265-18207404)
chr5 (297-363)||(2499251-2499317)
chr5 (205-291)||(31288053-31288139)
chr5 (348-430)||(41351104-41351191)
chr5 (202-287)||(4603778-4603863)
chr5 (297-392)||(24158209-24158305)
chr5 (202-242)||(25750767-25750807)
chr5 (299-392)||(4603837-4603931)
chr5 (297-430)||(30485886-30486025)
chr5 (299-393)||(36895485-36895580)
chr5 (315-357)||(10824038-10824080)
chr5 (205-291)||(33709608-33709694)
chr5 (297-366)||(34310200-34310269)
chr5 (202-239)||(19145570-19145607)
chr5 (202-291)||(32059547-32059636)
chr5 (297-365)||(37495105-37495173)
chr5 (202-291)||(38684209-38684298)
[»] chr8 (41 HSPs)
chr8 (291-430)||(8765526-8765671)
chr8 (293-430)||(2618244-2618387)
chr8 (297-430)||(34237655-34237794)
chr8 (297-430)||(4718707-4718846)
chr8 (297-430)||(21603292-21603431)
chr8 (297-430)||(39349318-39349457)
chr8 (293-392)||(24999292-24999392)
chr8 (291-392)||(25248405-25248505)
chr8 (293-392)||(18128571-18128671)
chr8 (203-291)||(28088292-28088380)
chr8 (297-430)||(3734623-3734762)
chr8 (297-430)||(14633016-14633155)
chr8 (300-392)||(20305973-20306066)
chr8 (300-392)||(21092606-21092699)
chr8 (297-429)||(28193536-28193674)
chr8 (297-366)||(28908885-28908954)
chr8 (297-386)||(15259455-15259545)
chr8 (297-430)||(6953008-6953146)
chr8 (202-291)||(3734730-3734819)
chr8 (348-392)||(4698766-4698811)
chr8 (299-392)||(12312910-12313003)
chr8 (297-392)||(20469979-20470075)
chr8 (202-291)||(27746442-27746531)
chr8 (202-291)||(42643225-42643314)
chr8 (347-430)||(2639411-2639500)
chr8 (312-363)||(589089-589140)
chr8 (312-363)||(624782-624833)
chr8 (297-430)||(34610687-34610826)
chr8 (297-366)||(24018444-24018513)
chr8 (297-363)||(26168922-26168987)
chr8 (297-366)||(42328066-42328135)
chr8 (202-291)||(264506-264595)
chr8 (202-291)||(651326-651415)
chr8 (202-291)||(837061-837150)
chr8 (297-334)||(11714921-11714958)
chr8 (193-242)||(18532103-18532152)
chr8 (315-392)||(20505633-20505710)
chr8 (297-370)||(22200626-22200699)
chr8 (202-291)||(28193479-28193568)
chr8 (202-291)||(34237762-34237851)
chr8 (306-359)||(34639284-34639337)
[»] chr6 (24 HSPs)
chr6 (299-430)||(21148511-21148647)
chr6 (297-430)||(3222636-3222774)
chr6 (297-392)||(9208310-9208406)
chr6 (297-430)||(21982321-21982459)
chr6 (297-431)||(654145-654285)
chr6 (297-431)||(11448929-11449069)
chr6 (297-430)||(1344993-1345132)
chr6 (297-430)||(15360098-15360237)
chr6 (297-430)||(34147404-34147543)
chr6 (297-430)||(34160020-34160159)
chr6 (293-431)||(28672121-28672265)
chr6 (297-392)||(12390483-12390579)
chr6 (297-392)||(17149499-17149595)
chr6 (202-242)||(28672068-28672108)
chr6 (297-366)||(12591695-12591764)
chr6 (297-392)||(5360114-5360210)
chr6 (202-291)||(15360205-15360294)
chr6 (317-392)||(22721775-22721851)
chr6 (193-291)||(9238967-9239065)
chr6 (297-429)||(9239033-9239171)
chr6 (202-239)||(8479313-8479350)
chr6 (297-366)||(10377773-10377842)
chr6 (202-291)||(12591638-12591727)
chr6 (315-392)||(17225743-17225820)
[»] chr3 (48 HSPs)
chr3 (297-430)||(46576406-46576545)
chr3 (297-430)||(1178230-1178367)
chr3 (297-430)||(8456150-8456289)
chr3 (297-430)||(52821636-52821774)
chr3 (297-430)||(53424177-53424315)
chr3 (302-403)||(1242036-1242139)
chr3 (297-430)||(15566500-15566638)
chr3 (336-430)||(24165715-24165813)
chr3 (297-392)||(35492969-35493065)
chr3 (297-430)||(30807153-30807292)
chr3 (297-430)||(8097279-8097418)
chr3 (297-430)||(21363001-21363140)
chr3 (299-392)||(34492618-34492712)
chr3 (297-430)||(40133449-40133588)
chr3 (297-430)||(45529755-45529893)
chr3 (297-430)||(49258262-49258401)
chr3 (336-430)||(54475779-54475878)
chr3 (297-430)||(25289715-25289853)
chr3 (202-291)||(7470322-7470411)
chr3 (297-392)||(18176930-18177026)
chr3 (297-392)||(7470259-7470354)
chr3 (202-242)||(18177043-18177083)
chr3 (297-391)||(26108350-26108445)
chr3 (297-430)||(10190742-10190881)
chr3 (202-289)||(21362944-21363031)
chr3 (297-392)||(50583050-50583145)
chr3 (297-430)||(53233911-53234049)
chr3 (205-291)||(15566606-15566692)
chr3 (202-292)||(30257625-30257715)
chr3 (300-392)||(45272459-45272552)
chr3 (202-291)||(7485632-7485721)
chr3 (202-291)||(40133556-40133645)
chr3 (202-291)||(48977389-48977478)
chr3 (297-392)||(48977446-48977542)
chr3 (202-291)||(53424283-53424372)
chr3 (202-242)||(4462634-4462674)
chr3 (347-430)||(24407369-24407458)
chr3 (297-430)||(10083819-10083958)
chr3 (202-285)||(25344170-25344253)
chr3 (297-430)||(26174171-26174310)
chr3 (297-430)||(30257682-30257821)
chr3 (205-291)||(32151428-32151514)
chr3 (297-392)||(2511340-2511436)
chr3 (202-239)||(4252555-4252592)
chr3 (202-291)||(25289821-25289910)
chr3 (202-291)||(30807260-30807349)
chr3 (202-291)||(35492912-35493001)
chr3 (215-292)||(49167070-49167147)
[»] chr7 (35 HSPs)
chr7 (297-430)||(22119950-22120089)
chr7 (297-430)||(40542910-40543049)
chr7 (297-430)||(654705-654843)
chr7 (291-430)||(21835207-21835352)
chr7 (297-431)||(7275339-7275479)
chr7 (297-430)||(2751333-2751472)
chr7 (297-430)||(7175862-7176001)
chr7 (299-430)||(17196950-17197087)
chr7 (297-366)||(23330809-23330878)
chr7 (297-392)||(29861732-29861828)
chr7 (297-392)||(28647031-28647127)
chr7 (202-245)||(1469117-1469160)
chr7 (291-362)||(8435769-8435840)
chr7 (297-430)||(10091250-10091388)
chr7 (297-430)||(21217833-21217972)
chr7 (297-392)||(2103117-2103213)
chr7 (202-291)||(2751276-2751365)
chr7 (297-392)||(22703548-22703644)
chr7 (293-431)||(22643341-22643485)
chr7 (202-242)||(28089821-28089861)
chr7 (348-430)||(3851870-3851958)
chr7 (299-392)||(9718030-9718124)
chr7 (297-430)||(11997911-11998050)
chr7 (297-430)||(27312214-27312353)
chr7 (297-363)||(1469174-1469240)
chr7 (297-366)||(18044169-18044238)
chr7 (202-244)||(38864600-38864642)
chr7 (193-291)||(40543017-40543115)
chr7 (202-291)||(7175969-7176058)
chr7 (202-291)||(7275282-7275371)
chr7 (202-291)||(22119893-22119982)
chr7 (348-392)||(22638401-22638446)
chr7 (351-431)||(31712901-31712987)
chr7 (202-291)||(32849596-32849685)
chr7 (297-365)||(41907584-41907652)
[»] chr2 (24 HSPs)
chr2 (297-392)||(8192395-8192490)
chr2 (297-430)||(33827573-33827712)
chr2 (297-430)||(35171858-35171997)
chr2 (297-364)||(3405224-3405291)
chr2 (297-430)||(15038017-15038156)
chr2 (297-392)||(19174821-19174916)
chr2 (299-384)||(45271444-45271530)
chr2 (202-291)||(15037960-15038049)
chr2 (297-392)||(10582035-10582129)
chr2 (297-392)||(24196062-24196156)
chr2 (336-430)||(11941210-11941309)
chr2 (297-391)||(17324824-17324918)
chr2 (297-430)||(44946053-44946192)
chr2 (297-392)||(44976196-44976293)
chr2 (297-363)||(4618758-4618824)
chr2 (297-392)||(5394075-5394171)
chr2 (297-366)||(18708535-18708604)
chr2 (297-430)||(30466830-30466969)
chr2 (336-403)||(3943838-3943906)
chr2 (193-242)||(18976581-18976630)
chr2 (293-346)||(28194223-28194276)
chr2 (297-392)||(36242355-36242451)
chr2 (202-291)||(41313993-41314082)
chr2 (202-291)||(44946160-44946249)
[»] chr1 (27 HSPs)
chr1 (297-430)||(4621237-4621376)
chr1 (297-430)||(24122081-24122220)
chr1 (297-403)||(32729603-32729710)
chr1 (297-392)||(24674451-24674547)
chr1 (297-430)||(7766727-7766866)
chr1 (202-291)||(46607811-46607900)
chr1 (297-431)||(7197246-7197385)
chr1 (348-430)||(8254752-8254840)
chr1 (297-430)||(15059402-15059541)
chr1 (297-355)||(1486476-1486534)
chr1 (297-370)||(9500421-9500494)
chr1 (297-392)||(8077705-8077801)
chr1 (202-242)||(47091691-47091731)
chr1 (297-392)||(16539666-16539761)
chr1 (297-356)||(16899561-16899620)
chr1 (297-429)||(17935827-17935965)
chr1 (297-355)||(19034467-19034525)
chr1 (297-366)||(23734174-23734243)
chr1 (297-366)||(23741366-23741435)
chr1 (297-355)||(25237070-25237128)
chr1 (297-366)||(27454936-27455005)
chr1 (336-429)||(34778437-34778535)
chr1 (206-291)||(1378903-1378988)
chr1 (202-291)||(4621344-4621433)
chr1 (202-291)||(24674394-24674483)
chr1 (297-392)||(30677234-30677330)
chr1 (297-392)||(46607868-46607964)
[»] scaffold0070 (1 HSPs)
scaffold0070 (297-430)||(40383-40521)
[»] scaffold0576 (2 HSPs)
scaffold0576 (297-430)||(5082-5221)
scaffold0576 (202-291)||(5189-5278)
[»] scaffold0019 (1 HSPs)
scaffold0019 (297-430)||(161867-162006)
[»] scaffold0217 (1 HSPs)
scaffold0217 (291-430)||(7309-7454)
[»] scaffold0160 (1 HSPs)
scaffold0160 (293-376)||(29202-29285)
[»] scaffold0102 (1 HSPs)
scaffold0102 (299-430)||(39152-39289)
[»] scaffold0026 (2 HSPs)
scaffold0026 (297-392)||(97409-97505)
scaffold0026 (202-291)||(97473-97562)
[»] scaffold0051 (1 HSPs)
scaffold0051 (297-430)||(52871-53010)
[»] scaffold0157 (1 HSPs)
scaffold0157 (297-366)||(20280-20349)
[»] scaffold0068 (1 HSPs)
scaffold0068 (202-242)||(41800-41840)
[»] scaffold0209 (1 HSPs)
scaffold0209 (312-363)||(30219-30270)
[»] scaffold0717 (1 HSPs)
scaffold0717 (297-366)||(28-97)
[»] scaffold1175 (1 HSPs)
scaffold1175 (336-392)||(2469-2525)


Alignment Details
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 38)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 180 - 491
Target Start/End: Original strand, 10125761 - 10126071
Alignment:
Q  180 taattattatttggcaaccgagttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgt 279  Q
    |||| ||||||||||||||||||||| |||||| |||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||| ||||||    
T  10125761 taataattatttggcaaccgagttggagttggcctagtggttgacttgggatcttggagtttgttcgtctcaagatctcgagcacgattccctctagtgt 10125860  T
Q  280 caatttcggtggatcttaggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtg 379  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||||||| ||||||||||| |||  |||||||    
T  10125861 caatttcggtgggtcttaggtttgattccccctggtgccaatttcagtgggcaaggccatacagagctttgctctagctttaaacggggccctgcaagtg 10125960  T
Q  380 agcggtgggattgtccccttggatcgattcttgaatcagataccgagtttttnnnnnnnntaatatttggcaaaaagataaatttttaattgaagaaatt 479  Q
     || |||||||||||||||||||||| ||||||||||||||||||| ||||          ||||||||||||||||||||| |||||||||||||| ||    
T  10125961 ggcagtgggattgtccccttggatcggttcttgaatcagataccga-ttttaaaaaaaaaaaatatttggcaaaaagataaagttttaattgaagaattt 10126059  T
Q  480 tgttaaatgatc 491  Q
    ||||||||||||    
T  10126060 tgttaaatgatc 10126071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 4e-71
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 10125299 - 10125479
Alignment:
Q  1 aatttttacaataattttggacgcaacacatttgagaatgtcatagnnnnnnnnagggggagaatgtcatagttaaaatacaatttgtatagaatatcta 100  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||        ||||||||||||||||| ||||||||||||||||||||||||||||    
T  10125299 aatttttacaataattttggacacaacaaatttgagaatgtcatagttttttttagggggagaatgtcatacttaaaatacaatttgtatagaatatcta 10125398  T
Q  101 ataatttgagaatgtcgtagttaaacctttttgtgtccgaaaattccaaaatttacaccaaaatgactagaatatctaata 181  Q
    ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10125399 ataatttgagaatgtcgtagttagaccttttggtgtccgaaaattccaaaatttacaccaaaatgactagaatatctaata 10125479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 135; E-Value: 6e-70
Query Start/End: Original strand, 558 - 720
Target Start/End: Original strand, 10126444 - 10126606
Alignment:
Q  558 agatatggtagagtgtaagaagaaattgactcactgtcgagaccaaggcaatatggcggatctttttcaacttgaaaccctcgataaacactaaacgcaa 657  Q
    |||||| |||||||||||||| |||||| |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  10126444 agatattgtagagtgtaagaaaaaattggctcaatgtcgagaccaaggcaacatggcggatgtttttcaacttgaaaccctcgataaacactaaacgcaa 10126543  T
Q  658 ctcatggtgcaagaagatttgtattggaggcaacatgccaaaacctattggtatcgagacggt 720  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  10126544 ctcatggtgcaagaagatttgtattggaggcaacatgccaaaacctattggtatagagacggt 10126606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 52983677 - 52983815
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||| ||    
T  52983677 aggttcgattccctctggtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt 52983775  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagttt 429  Q
    ||||| |||    |||||||||| ||| ||||||||||||    
T  52983776 cccctcggattagtcgattcttggatcggataccgagttt 52983815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 291 - 430
Target Start/End: Complemental strand, 45787849 - 45787704
Alignment:
Q  291 gatcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtggg 388  Q
    ||||| ||||||||||||| ||||||||||||||| ||||| ||| ||||||||||| ||||||||||||||||| ||  || ||||||||  |||||||    
T  45787849 gatctcaggttcgattccctctgatgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagtggacggtggg 45787751  T
Q  389 att-gtccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||| ||||||| | |    |||||||||| ||| |||||||||||||    
T  45787750 attggtcccctcgaattagtcgattcttggatcggataccgagtttt 45787704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 25969639 - 25969545
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 392  Q
    ||||| ||||||||||| ||||||||||  ||| |||| ||||||||| ||| |||||||||||||||||  || || ||||||||||||||||||    
T  25969639 aggttggattccccctggtgccaatttcggtggccaagtccatacagaactt-gctctggctttaaacgggcccccgtaagtgagcggtgggattg 25969545  T

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Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 34844897 - 34844758
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| | ||||||| |||||||||||| |    
T  34844897 aggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 34844799  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  34844798 cccctcggattagtcgattcttggatcggataccgagtttt 34844758  T

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Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 40058991 - 40058852
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| | ||||||| |||||||||||| |    
T  40058991 aggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 40058893  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  40058892 cccctcggattagtcgattcttggatcggataccgagtttt 40058852  T

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Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 20566408 - 20566504
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaagg-ccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| ||||||||||  ||||||| | ||||||||||||| ||||||||||||||||||| || |||||||| ||| ||||||||    
T  20566408 aggttcgattccctctggtgccaatttcggtgggcaaagtccatacagagctt-gctctggctttaaacggagcccccgcaagtgggcgctgggattg 20566504  T

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Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 27528934 - 27528795
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| |||||||||||| |||| ||| | ||||||| |||||| ||||| |    
T  27528934 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttatacggggcccccgcaagtgggcggtgagattggt 27528836  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  27528835 cccctcggattagtcgattcttggatcggataccgagtttt 27528795  T

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Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 303 - 392
Target Start/End: Complemental strand, 13716583 - 13716493
Alignment:
Q  303 gattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 392  Q
    ||||||||||  ||||||||||| |||||||| |||||| || ||||||| || |||||||| ||  ||||||||||| ||||||||||||    
T  13716583 gattccccctagtgccaatttcagtgggcaagtccatacggaactttgctatgtctttaaacagggccctcgcaagtgggcggtgggattg 13716493  T

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Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 291 - 366
Target Start/End: Complemental strand, 18875661 - 18875586
Alignment:
Q  291 gatcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 366  Q
    ||||| ||||||||||||| |||||| |||||||  ||||| ||| ||||||||||| |||||||||||||||||||    
T  18875661 gatctcaggttcgattccctctgatgtcaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgg 18875586  T

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Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 431
Target Start/End: Original strand, 34723857 - 34723997
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||| ||| ||||||||||||||||||| | || |||||||| | ||||||||| ||    
T  34723857 aggttcgattccctctggtgccaatttcggtgggctaagtccatacaaagc-ttgctctggctttaaacggggcccccgcaagtgggtggtgggattggt 34723955  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagttttt 431  Q
    || || |||    |||||||||| ||| ||||||||||||||    
T  34723956 cctctcggattagtcgattcttggatcggataccgagttttt 34723997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 5609341 - 5609202
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| |||||||||||||| || ||| | |||||||  ||||||||||| |    
T  5609341 aggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtggacggtgggattgat 5609243  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  5609242 cccctcggattagtcgattcttggatcggataccgagtttt 5609202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 32986255 - 32986394
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    |||||| |||||| ||| ||||||||||  ||||| ||| ||||||||||||| |||||| ||||||| || ||| | ||||||| |||||||||||| |    
T  32986255 aggttcaattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaatggggcccccgcaagtgggcggtgggattggt 32986353  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    |||||||||| ||| |||||||||||||    
T  32986354 cccctcggaatagtcgattcttggatcggataccgagtttt 32986394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 12500197 - 12500128
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 366  Q
    ||||| ||||||| ||| ||||||||||||||||| ||| ||||||| ||| |||||||||||||||||||    
T  12500197 aggtttgattccctctggtgccaatttcaatgggctaagtccatacatagc-ttgctctggctttaaacgg 12500128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 363
Target Start/End: Original strand, 37455635 - 37455700
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 363  Q
    |||||||||||||| || ||||||||||||||||| |  ||||| |||| |||||||||||||||||    
T  37455635 aggttcgattcccc-tggtgccaatttcaatgggctaatccatatagagatttgctctggctttaaa 37455700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 428
Target Start/End: Complemental strand, 20078123 - 20077986
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    ||||| ||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || || ||||| ||||||||||| ||    
T  20078123 aggtttgattcccactggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgtaagtgggcggtgggattagt 20078025  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtt 428  Q
     |||| |||    |||||||||| ||| |||||||||||    
T  20078024 tccctcggattagtcgattcttggatcggataccgagtt 20077986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 25852215 - 25852304
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||| | ||| ||||||||||||    
T  25852215 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgg 25852304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 32990493 - 32990589
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    |||||||||||||  |  ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  32990493 aggttcgattccctttagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 32990589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 52983611 - 52983660
Alignment:
Q  193 gcaaccgagttggggttggcgtagtggttgacttgagatcttggagtttg 242  Q
    |||||| | ||||||||||| ||||||||| |||||||||||||||||||    
T  52983611 gcaacccatttggggttggcctagtggttggcttgagatcttggagtttg 52983660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 311 - 359
Target Start/End: Complemental strand, 9646341 - 9646293
Alignment:
Q  311 ctgatgccaatttcaatgggcaaggccatacagagctttgctctggctt 359  Q
    |||||| |||||||||||||||||  ||||||| |||||||||||||||    
T  9646341 ctgatgacaatttcaatgggcaagttcatacagtgctttgctctggctt 9646293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 42245747 - 42245823
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtg 278  Q
    ||||||||||| |||||||||||||| |||||| ||||||| || || |||| ||||| |  ||||||||| |||||    
T  42245747 ttggggttggcctagtggttgacttgggatcttagagtttgctcctctaaaggtctcgggttcgattccctctagtg 42245823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 13584391 - 13584297
Alignment:
Q  299 gttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||| ||| || ||||||| |||||| ||| ||||| ||||||| ||||||||||||||||| | |||| ||| |||||||||| ||||    
T  13584391 gttcgattccctctggtgtcaatttcgatgggctaagtccatagagagctt-gctctggctttaaacggggccctcacaaatgagcggtggaattg 13584297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 336 - 430
Target Start/End: Complemental strand, 19660631 - 19660532
Alignment:
Q  336 ccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-tccccttggat----cgattcttgaatcagataccgagttt 429  Q
    ||||||||||||| ||||||||||||||| | ||| | ||||||| |||||||||||| |||||| ||||    ||||||||| ||| ||||||||||||    
T  19660631 ccatacagagctt-gctctggctttaaacagggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagttt 19660533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 363
Target Start/End: Original strand, 25852272 - 25852338
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaa 363  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||    
T  25852272 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaa 25852338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 362
Target Start/End: Original strand, 41085086 - 41085149
Alignment:
Q  299 gttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaa 362  Q
    ||||||||| | |||||||| ||||| |||| |||| ||||| ||||||||||||| |||||||    
T  41085086 gttcgattctctctgatgccgatttcgatggacaagtccatatagagctttgctctagctttaa 41085149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 9517780 - 9517711
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 366  Q
    ||||||||||| | ||| ||||||||||| ||||| ||| ||||||||||| |||||||| ||||||||||    
T  9517780 aggttcgattctctctggtgccaatttcagtgggctaagtccatacagagc-ttgctctgactttaaacgg 9517711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 32942428 - 32942497
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 366  Q
    ||||||||||| | ||||||||||||||  ||||| ||| ||||||||||| || ||||||||||||||||    
T  32942428 aggttcgattctctctgatgccaatttcggtgggctaagtccatacagagc-ttactctggctttaaacgg 32942497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 293 - 366
Target Start/End: Original strand, 33992680 - 33992753
Alignment:
Q  293 tcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 366  Q
    ||||||||||||||| | ||| ||||||||||  ||||| ||| ||||||| ||| |||||||||||||||||||    
T  33992680 tcttaggttcgattctctctggtgccaatttcggtgggctaagtccatacatagc-ttgctctggctttaaacgg 33992753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 359
Target Start/End: Original strand, 39288917 - 39288978
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctt 359  Q
    |||||| |||||| |||||| |||||||  |||||||| ||||||||||| ||||||||||||    
T  39288917 aggttcaattcccactgatgtcaatttcggtgggcaagtccatacagagc-ttgctctggctt 39288978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 315 - 392
Target Start/End: Complemental strand, 55961874 - 55961797
Alignment:
Q  315 tgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 392  Q
    ||||||||||  ||||| ||| ||||||||||||| |||||| |||||||||| ||| | |||||| ||||||||||||    
T  55961874 tgccaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggccccacaagtgggcggtgggattg 55961797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 4911926 - 4911963
Alignment:
Q  205 gggttggcgtagtggttgacttgagatcttggagtttg 242  Q
    |||||||| ||||||||||||| |||||||||||||||    
T  4911926 gggttggcttagtggttgacttaagatcttggagtttg 4911963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 46714384 - 46714433
Alignment:
Q  193 gcaaccgagttggggttggcgtagtggttgacttgagatcttggagtttg 242  Q
    |||||| | ||||||||||| ||||||||| |||| ||||||||||||||    
T  46714384 gcaacccatttggggttggcctagtggttggcttgggatcttggagtttg 46714433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 315 - 430
Target Start/End: Original strand, 46714469 - 46714590
Alignment:
Q  315 tgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-tccccttggat----cgat 407  Q
    ||||||||||  ||||| ||| ||||||||||||| || || ||||||||||| ||| | ||||||| |||||||||||| |||||| ||||    | ||    
T  46714469 tgccaatttcggtgggctaagtccatacagagctt-gcccttgctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcaat 46714567  T
Q  408 tcttgaatcagataccgagtttt 430  Q
    ||||||||| |||||||||||||    
T  46714568 tcttgaatcggataccgagtttt 46714590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 205 - 242
Target Start/End: Original strand, 51535617 - 51535654
Alignment:
Q  205 gggttggcgtagtggttgacttgagatcttggagtttg 242  Q
    |||||||| |||||||||||||| ||||||||||||||    
T  51535617 gggttggcctagtggttgacttgggatcttggagtttg 51535654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 54127481 - 54127385
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    |||||| |||||| ||  ||||||||||  ||||| ||| | ||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  54127481 aggttcaattccctcttgtgccaatttcggtgggctaagtctatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 54127385  T

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Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 54127538 - 54127449
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  | ||||||| | ||| ||||||||||||    
T  54127538 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcaattccctcttgtgccaatttcggtgg 54127449  T

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Target: chr5 (Bit Score: 55; Significance: 3e-22; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 298 - 392
Target Start/End: Complemental strand, 19145549 - 19145455
Alignment:
Q  298 ggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 392  Q
    |||||||||||| ||| ||||||||||  |||||||| |||||||||||||||||||||||||||| ||  || |||||||| ||||||||||||    
T  19145549 ggttcgattccctctggtgccaatttcggtgggcaagtccatacagagctttgctctggctttaaatggtcccccgcaagtgggcggtgggattg 19145455  T

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Target: chr5; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 38684266 - 38684404
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtc 394  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| |||||||||||||||||  || |||||||||||||||||||| |||    
T  38684266 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccgcaagtgagcggtgggattggtc 38684364  T
Q  395 cccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    |||| |||    |||||||||| ||| |||||||| ||||    
T  38684365 ccctcggattagtcgattcttggatcggataccgattttt 38684404  T

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Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 19456348 - 19456211
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtc 394  Q
    ||||||||| ||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| |||||||| ||||||||||| |||    
T  19456348 aggttcgat-ccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccccgcaagtgggcggtgggattggtc 19456251  T
Q  395 cccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    |||| |||    |||||||||| ||| |||||||||||||    
T  19456250 ccctcggattagtcgattcttggatcggataccgagtttt 19456211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 27498870 - 27498731
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||| ||||| ||||||||||||||||| ||| | ||||||| |||||||||||| |    
T  27498870 aggttcgattccctctggtgccaatttcggtgggctaagtccatacatagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 27498772  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  27498771 cccctcggattagtcgattcttggatcggataccgagtttt 27498731  T

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Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 8484800 - 8484661
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||| ||||||| ||| ||||||||||  ||||| |||  |||||||||||| ||||||||||||||||| ||| | ||||||| |||||||||||| |    
T  8484800 aggtttgattccctctggtgccaatttcggtgggctaagttcatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 8484702  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  8484701 cccctcggattagtcgattcttggatcggataccgagtttt 8484661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 15641244 - 15641106
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| |||  |||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||| ||    
T  15641244 aggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 15641146  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    |||||||||| ||| |||||||||||||    
T  15641145 cccctcggattagtcgattcttg-atcggataccgagtttt 15641106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 298 - 430
Target Start/End: Complemental strand, 7085764 - 7085626
Alignment:
Q  298 ggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg-tc 394  Q
    |||||||||||| ||  || |||||||  ||||| ||| ||||||||||||| |||||| |||||||||| | || |||||||| |||||||||||| ||    
T  7085764 ggttcgattccctctagtgtcaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggtccccgcaagtgggcggtgggattggtc 7085666  T
Q  395 cccttggat----cgattcttgaatcagataccgagtttt 430  Q
    |||| ||||    ||||||||||||| |||||||||||||    
T  7085665 ccctcggattagtcgattcttgaatcggataccgagtttt 7085626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 11926641 - 11926501
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc--gcaagtgagcggtgggattg- 392  Q
    ||||| ||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| |  ||||||| | ||||||||||     
T  11926641 aggttagattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggtggtgggattgg 11926543  T
Q  393 tccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    |||||| ||||    ||||||||| ||| |||||||||||||    
T  11926542 tcccctcggattagtcgattcttggatcggataccgagtttt 11926501  T

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Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 32059579 - 32059483
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||  ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  32059579 aggttcgattccttctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 32059483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 391
Target Start/End: Original strand, 15931117 - 15931211
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagc-ctcgcaagtgagcggtgggatt 391  Q
    ||||||||||||| ||| ||||||||||  |||  ||| |||||||||||  |||||||||||||||| | || |||||||||| |||||||||||    
T  15931117 aggttcgattccctctggtgccaatttcggtggctaagtccatacagagc-ctgctctggctttaaacagggctctcgcaagtgggcggtgggatt 15931211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 18207265 - 18207404
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| | | ||||||||||  ||||| ||| ||||||||||||| | ||||||||||||||  ||| | ||||||| |||||||||||| |    
T  18207265 aggttcgattccctccggtgccaatttcggtgggctaagtccatacagagctt-gttctggctttaaacgaggcccccgcaagtgggcggtgggattggt 18207363  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  18207364 cccctcggattagtcgattcttggatcggataccgagtttt 18207404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 363
Target Start/End: Complemental strand, 2499317 - 2499251
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 363  Q
    ||||||||||| ||||| || ||||||| ||||||||| ||||| ||||| || |||||||||||||    
T  2499317 aggttcgattctccctgttgtcaatttcgatgggcaagtccatatagagccttactctggctttaaa 2499251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 31288139 - 31288053
Alignment:
Q  205 gggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    |||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||||| ||| ||||||||||||    
T  31288139 gggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcatgttcgattccctttggtgccaatttcggtgg 31288053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 348 - 430
Target Start/End: Complemental strand, 41351191 - 41351104
Alignment:
Q  348 ttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||||||||||||||||| ||  |||||||| ||||||||||| ||||||| |||    |||||||||| ||| |||||||||||||    
T  41351191 ttgctctggctttaaacggggctccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 41351104  T

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Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 287
Target Start/End: Original strand, 4603778 - 4603863
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcg 287  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || ||||||||| ||  ||||||| | | ||| ||||||||    
T  4603778 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaagatctcaagttcgattccttctggtgccaatttcg 4603863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 24158305 - 24158209
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg 392  Q
    ||||||||||||  ||| || ||||||| ||||| ||| ||||||| |||||| |||||||||  ||||| ||||| ||||||| |||||| |||||    
T  24158305 aggttcgattccttctggtgtcaatttcgatgggtaagtccatacatagctttactctggcttagaacggggcctctgcaagtgggcggtgagattg 24158209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 25750807 - 25750767
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttg 242  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  25750807 ttggggttggcctagtggttgacttgggatcttggagtttg 25750767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 4603837 - 4603931
Alignment:
Q  299 gttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg 392  Q
    ||||||||||  ||| |||||||||| |||||| ||| ||||||||||||  ||||||||||||||||| ||| | |||||||  |||||||||||    
T  4603837 gttcgattccttctggtgccaatttcgatgggctaagtccatacagagctc-gctctggctttaaacggggcccctgcaagtggacggtgggattg 4603931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 30485886 - 30486025
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||| | ||| || |||||||  ||||| ||| ||||||||||||| ||||||||||||||||  | || |||||||| ||||||||||| ||    
T  30485886 aggttcgattcactctggtgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgatgcccccgcaagtgggcggtgggattggt 30485984  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    || ||||||| ||| |||||||||||||    
T  30485985 cccctcggattagtcaattcttggatcggataccgagtttt 30486025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 393
Target Start/End: Original strand, 36895485 - 36895580
Alignment:
Q  299 gttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcc-tcgcaagtgagcggtgggattgt 393  Q
    ||||||||||| ||| | ||||||||  ||| |||| ||||||| ||||||||||||||||  |||| ||||  |||||||| |||| ||||||||    
T  36895485 gttcgattccctctggtaccaatttcggtggtcaagtccatacaaagctttgctctggcttagaacgtagccgccgcaagtgggcggggggattgt 36895580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 315 - 357
Target Start/End: Complemental strand, 10824080 - 10824038
Alignment:
Q  315 tgccaatttcaatgggcaaggccatacagagctttgctctggc 357  Q
    |||||||||| ||||||||| || |||||||||||||||||||    
T  10824080 tgccaatttcgatgggcaagtccttacagagctttgctctggc 10824038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 33709694 - 33709608
Alignment:
Q  205 gggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    |||||||| ||||||||| |||| |||||||||||||| || || | || |||| ||  ||||||||| | ||| ||||||||||||    
T  33709694 gggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaagttcgattccctctggtgccaatttcggtgg 33709608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 34310200 - 34310269
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 366  Q
    ||||||||||||| ||| |||||||||   ||||| ||| ||||||||||| |||||||||||||||||||    
T  34310200 aggttcgattccctctggtgccaattttggtgggctaagtccatacagagc-ttgctctggctttaaacgg 34310269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 19145607 - 19145570
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagt 239  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  19145607 ttggggttggcctagtggttgacttgggatcttggagt 19145570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 32059636 - 32059547
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||| | | ||| ||||||||||||    
T  32059636 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgg 32059547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 365
Target Start/End: Original strand, 37495105 - 37495173
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacg 365  Q
    ||||||||||||| ||| |||||||||   ||||| ||| ||||||||||| ||||||||||||||||||    
T  37495105 aggttcgattccctctggtgccaattttggtgggctaagtccatacagagc-ttgctctggctttaaacg 37495173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 38684209 - 38684298
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    |||||||||||  ||||||||||||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  38684209 ttggggttggcccagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 38684298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 1e-21; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 291 - 430
Target Start/End: Complemental strand, 8765671 - 8765526
Alignment:
Q  291 gatcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagc-ctcgcaagtgagcggtggg 388  Q
    ||||| ||||||||||||| ||| |||||||||| |||||| ||| ||||||||||| ||||||||||||||||||| || | |||||||| ||||||||    
T  8765671 gatctcaggttcgattccctctggtgccaatttcgatgggctaagtccatacagagc-ttgctctggctttaaacggggctcccgcaagtgggcggtggg 8765573  T
Q  389 att-gtccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||| ||||||| |||    |||||||||| ||| |||||||||||||    
T  8765572 attggtcccctcggattagtcgattcttggatcggataccgagtttt 8765526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 293 - 430
Target Start/End: Original strand, 2618244 - 2618387
Alignment:
Q  293 tcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggat 390  Q
    |||| |||||||||||| ||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||||| || |||||||| ||||||||||    
T  2618244 tcttgggttcgattccctctggtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacggagcccccgcaagtgggcggtgggat 2618342  T
Q  391 t-gtccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    | ||||||| |||    |||||||||| ||| ||| |||||||||    
T  2618343 tggtcccctcggattagtcgattcttggatcggattccgagtttt 2618387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 34237794 - 34237655
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| | ||||||||||||||||||| ||    
T  34237794 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgagcggtgggattggt 34237696  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    |||||||||| ||| |||||||||||||    
T  34237695 cccctcggattagtcgattcttggatcggataccgagtttt 34237655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 4718707 - 4718846
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||| ||    
T  4718707 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt 4718805  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    |||||||||| ||| |||||||||||||    
T  4718806 cccctcggattagtcgattcttggatcggataccgagtttt 4718846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 21603292 - 21603431
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    |||||||||||||  || ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| | ||||||| |||||||||||| |    
T  21603292 aggttcgattccctatggtgccaatttcggtgggctaagcccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 21603390  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  21603391 cccctcggattagtcgattcttggatcggataccgagtttt 21603431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 39349318 - 39349457
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| |||||||||||| |    
T  39349318 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattgat 39349416  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    |||||||||| ||| |||||| ||||||    
T  39349417 cccctcggattagtcgattcttggatcggataccaagtttt 39349457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 293 - 392
Target Start/End: Original strand, 24999292 - 24999392
Alignment:
Q  293 tcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggat 390  Q
    ||||||||||||||||| |||||||||||||  |||||| |||  |||| ||||| ||||||||||||||||||| | || |||||||| ||||||||||    
T  24999292 tcttaggttcgattccctctgatgccaattttgatgggctaagttcatatagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggat 24999390  T
Q  391 tg 392  Q
    ||    
T  24999391 tg 24999392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 291 - 392
Target Start/End: Original strand, 25248405 - 25248505
Alignment:
Q  291 gatcttaggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggat 390  Q
    ||||| ||||||||||||| ||| || |||||||  | ||| | | ||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||    
T  25248405 gatctcaggttcgattccctctggtgtcaatttcggtaggctaagtcatacagag-tttgctctggctttaaacgggccctcgcaagtgggcggtgggat 25248503  T
Q  391 tg 392  Q
    ||    
T  25248504 tg 25248505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 293 - 392
Target Start/End: Original strand, 18128571 - 18128671
Alignment:
Q  293 tcttaggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt 391  Q
    |||||| |||||||| | ||| ||||||||||  ||||| |  ||||| ||||||||||||||||||||||||| | || |||||||| |||||||||||    
T  18128571 tcttagattcgattctctctggtgccaatttcggtgggcgaatccataaagagctttgctctggctttaaacggggcccccgcaagtgggcggtgggatt 18128670  T
Q  392 g 392  Q
    |    
T  18128671 g 18128671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 203 - 291
Target Start/End: Original strand, 28088292 - 28088380
Alignment:
Q  203 tggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    |||||||||| |||||||||||||| ||||||||||||||||| || | || ||||     ||||||||||| ||||||||||||||||    
T  28088292 tggggttggcttagtggttgacttgggatcttggagtttgttcatccagaggtctcagattcgattccctttggtgtcaatttcggtgg 28088380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 3734762 - 3734623
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| | |||| || || ||||||||| |    
T  3734762 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatgggcagtgggattggt 3734664  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  3734663 cccctcggattagtcgattcttggatcggataccgagtttt 3734623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 14633016 - 14633155
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcct-cgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| | ||||||||| ||||||||||||| |||||||| | | |||||| ||||||||||| ||    
T  14633016 aggttcgattccctctggtgccaatttcggtgggctaagtctatacagagc-ttgctctggctttgaacggagcgtccacaagtgggcggtgggattggt 14633114  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    |||||||||    |||||||||| ||| |||||| ||||||    
T  14633115 ccccttggattagtcgattcttggatcggataccaagtttt 14633155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 392
Target Start/End: Original strand, 20305973 - 20306066
Alignment:
Q  300 ttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 392  Q
    |||||||||  ||| |||||||||| |||||| ||| ||||||||||||| ||||||||||||||| ||| || |||||||| ||||||||||||    
T  20305973 ttcgattccttctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattg 20306066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 300 - 392
Target Start/End: Original strand, 21092606 - 21092699
Alignment:
Q  300 ttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 392  Q
    |||||||||  ||| |||||||||| |||||| ||| ||||||||||||| ||||||||||||||| ||| || |||||||| ||||||||||||    
T  21092606 ttcgattccttctggtgccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattg 21092699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 28193536 - 28193674
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatggg-caaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||  ||||  ||| ||||||||||| ||||||||||||||||||| ||| |  |||||| ||||||||||| ||    
T  28193536 aggttcgattccctctggtgccaatttcggtgggttaagtccatacagagc-ttgctctggctttaaacggggcccctacaagtgggcggtgggattggt 28193634  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagttt 429  Q
    ||||| |||    |||||||||| ||| ||||||||||||    
T  28193635 cccctcggattagtcgattcttggatcggataccgagttt 28193674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 28908885 - 28908954
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacgg 366  Q
    |||||| |||||| ||| || ||||| || |||||||| ||||||||||||||| |||||||||||||||    
T  28908885 aggttcaattccctctggtgtcaattacagtgggcaagtccatacagagctttgttctggctttaaacgg 28908954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 386
Target Start/End: Complemental strand, 15259545 - 15259455
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtg 386  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||    
T  15259545 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtg 15259455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 6953146 - 6953008
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattgtc 394  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||| ||  || |||||||  ||||||||||||      
T  6953146 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagttggcggtgggattggt 6953048  T
Q  395 cccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    |||| |||    |||||||||| |||  ||||||||||||    
T  6953047 ccctcggattagtcgattcttggatcgaataccgagtttt 6953008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 3734819 - 3734730
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||| | ||| ||||||||||||    
T  3734819 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgg 3734730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 4698811 - 4698766
Alignment:
Q  348 ttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||||||||||| || |||||||||||||||||||||    
T  4698811 ttgctctggctttaaacggagcccccgcaagtgagcggtgggattg 4698766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 299 - 392
Target Start/End: Original strand, 12312910 - 12313003
Alignment:
Q  299 gttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 392  Q
    |||||||| || ||| |||||||||  ||||||||||||| ||| ||||||| | |||||||||| ||  || | |||||| ||||||||||||    
T  12312910 gttcgatttcctctggtgccaattttgatgggcaaggccacacaaagctttgatttggctttaaatgggcccccacaagtgggcggtgggattg 12313003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 20469979 - 20470075
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||   ||||||||  |||||| ||| ||||||||||||| ||||||||||||||| ||| || |||||||| ||||||||||||    
T  20469979 aggttcgattccctctagagccaatttagatgggctaagtccatacagagctt-gctctggctttaaacagagcccccgcaagtgggcggtgggattg 20470075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 27746531 - 27746442
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| |||||||||  ||| |||||||||||||| || || |||| ||||  |  ||||||||||| ||| ||||||||||||    
T  27746531 ttggggttggcctagtggttggtttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgg 27746442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 42643314 - 42643225
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| |||||||||||||| |||||||||||||| || || | || ||||     ||||||||| ||||| ||||||||||||    
T  42643314 ttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcagattcgattccctctagtgccaatttcggtgg 42643225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 347 - 430
Target Start/End: Complemental strand, 2639500 - 2639411
Alignment:
Q  347 tttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-tccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    |||||||||||||||||||| ||| | ||||||| |||||||||||| |||||| ||||    ||||||||| ||| |||||||||||||    
T  2639500 tttgctctggctttaaacggggcccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 2639411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Complemental strand, 589140 - 589089
Alignment:
Q  312 tgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 363  Q
    ||||| |||||||||||| |||| ||||| ||||||||||||||||| ||||    
T  589140 tgatgtcaatttcaatggacaagtccatatagagctttgctctggctataaa 589089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 624782 - 624833
Alignment:
Q  312 tgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 363  Q
    ||||| |||||||||||| |||| ||||| ||||||||||||||||| ||||    
T  624782 tgatgtcaatttcaatggacaagtccatatagagctttgctctggctataaa 624833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 34610826 - 34610687
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacg-gagcctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||||||||||||||  ||| | ||| | ||||||||| |||||||||||||||||| |  ||||||||||| ||||| | ||| ||    
T  34610826 aggttcgattccctctgatgccaatttcggtggtctaagtctatacagagc-ttgctctggctttaaacgagcccctcgcaagtgggcggtagaattggt 34610728  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| | |    |||||||||| ||| |||||||||||||    
T  34610727 cccctcgaattagtcgattcttggatcggataccgagtttt 34610687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 24018444 - 24018513
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 366  Q
    |||||||||| || || ||| |||||||| ||||| ||| ||||||||||||| |||||||||||||||||    
T  24018444 aggttcgatttcctctaatgtcaatttcagtgggctaagtccatacagagctt-gctctggctttaaacgg 24018513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 363
Target Start/End: Complemental strand, 26168987 - 26168922
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 363  Q
    ||||| |||||| |||||||||||||||  ||||||||  |||||||||| ||| ||||||||||||    
T  26168987 aggtttgattcctcctgatgccaatttcggtgggcaagttcatacagagc-ttgttctggctttaaa 26168922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 42328066 - 42328135
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 366  Q
    ||||| ||||||| ||| ||||||||||  ||||| ||| ||||||||||||| |||||||||||||||||    
T  42328066 aggtttgattccctctgttgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgg 42328135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 264595 - 264506
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    |||| |||||| ||||||||| |||| |||||| ||||||| || || | |||||||  |  ||||||||| ||||| ||||||||||||    
T  264595 ttggcgttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgg 264506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 651326 - 651415
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    |||| |||||| ||||||||| |||| |||||| ||||||| || || | |||||||  |  ||||||||| ||||| ||||||||||||    
T  651326 ttggcgttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgg 651415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 837061 - 837150
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    |||| |||||| ||||||||| |||| |||||| ||||||| || || | |||||||  |  ||||||||| ||||| ||||||||||||    
T  837061 ttggcgttggcctagtggttggcttgggatcttcgagtttgctcctccagagatctcaggttcgattccctctagtgccaatttcggtgg 837150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 334
Target Start/End: Complemental strand, 11714958 - 11714921
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaag 334  Q
    |||||||||||||||||||||||||||||  |||||||    
T  11714958 aggttcgattccccctgatgccaatttcagcgggcaag 11714921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 242
Target Start/End: Original strand, 18532103 - 18532152
Alignment:
Q  193 gcaaccgagttggggttggcgtagtggttgacttgagatcttggagtttg 242  Q
    |||||| | ||||||||||| ||||||||| |||| ||||||||||||||    
T  18532103 gcaacccatttggggttggcctagtggttggcttgggatcttggagtttg 18532152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 315 - 392
Target Start/End: Original strand, 20505633 - 20505710
Alignment:
Q  315 tgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 392  Q
    |||||||||||  ||||||| ||||||| ||||||| | ||||||||||  | ||  |||||||| ||||||||||||    
T  20505633 tgccaatttcagcgggcaagtccatacaaagctttgttttggctttaaatagggcaccgcaagtgggcggtgggattg 20505710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 370
Target Start/End: Complemental strand, 22200699 - 22200626
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcc 370  Q
    ||||||||||||| ||  |||||||||| | ||  |||  |||||||||||||||||||||||  |||||||||    
T  22200699 aggttcgattccctctagtgccaatttcgagggaaaagttcatacagagctttgctctggcttagaacggagcc 22200626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 28193479 - 28193568
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  28193479 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 28193568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 34237851 - 34237762
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  34237851 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 34237762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 306 - 359
Target Start/End: Complemental strand, 34639337 - 34639284
Alignment:
Q  306 tccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctt 359  Q
    |||| ||| ||||||||||  |||| ||| ||||||||||||||||||||||||    
T  34639337 tccctctggtgccaatttcggtgggtaagtccatacagagctttgctctggctt 34639284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 5e-21; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 299 - 430
Target Start/End: Complemental strand, 21148647 - 21148511
Alignment:
Q  299 gttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtccc 396  Q
    ||||||||||| ||  |||||||||| |||||| ||| ||||||||||||| |||||| |||||||||| ||| |||||||| ||||||||||| |||||    
T  21148647 gttcgattccctctagtgccaatttcgatgggctaagtccatacagagctt-gctctgactttaaacggggccccgcaagtgggcggtgggattggtccc 21148549  T
Q  397 cttgga----tcgattcttgaatcagataccgagtttt 430  Q
    || |||    |||||||||||||| |||||||||||||    
T  21148548 ctcggattagtcgattcttgaatcggataccgagtttt 21148511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 3222774 - 3222636
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtc 394  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| |||||| |||||||||| ||| |||||||| ||||||||||| |||    
T  3222774 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctgtctttaaacggggccccgcaagtgggcggtgggattggtc 3222676  T
Q  395 cccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    |||| |||    |||||||||| ||| |||||||||||||    
T  3222675 ccctcggattagtcgattcttggatcggataccgagtttt 3222636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 9208310 - 9208406
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||||||| ||||||||||  |||||||| ||||||||||| ||||| |||||||||| || | || |||||||| ||||||||||||    
T  9208310 aggttcgattccccctggtgccaatttcggtgggcaagtccatacagagccttgctttggctttaaatggggcccccgcaagtgggcggtgggattg 9208406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 21982459 - 21982321
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattgtc 394  Q
    |||||||||||||  || ||||||||||| ||||| ||| ||||||||||||| ||||||||||||||||| ||| | ||||||| ||||||||||||      
T  21982459 aggttcgattcccgatggtgccaatttcagtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 21982361  T
Q  395 cccttggat----cgattcttgaatcagataccgagtttt 430  Q
    |||| ||||    ||||||||| ||| |||||||||||||    
T  21982360 ccctcggattagtcgattcttggatcggataccgagtttt 21982321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 297 - 431
Target Start/End: Complemental strand, 654285 - 654145
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagc-ctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| || | |||||||| ||||||||||| ||    
T  654285 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggctcccgcaagtgggcggtgggattggt 654187  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagttttt 431  Q
    ||||| |||    |||||| ||| ||| ||||||||||||||    
T  654186 cccctcggattagtcgattattggatcggataccgagttttt 654145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 297 - 431
Target Start/End: Original strand, 11448929 - 11449069
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| | ||||||| |||||||||||| |    
T  11448929 aggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 11449027  T
Q  394 ccccttggat----cgattcttgaatcagataccgagttttt 431  Q
    ||||| ||||    ||||||||||||| |||| |||||||||    
T  11449028 cccctcggattagtcgattcttgaatcggatatcgagttttt 11449069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 1344993 - 1345132
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||| ||||| ||| ||||||| ||| ||||||||||||||||| ||  || ||||||||  |||||||||| ||    
T  1344993 aggttcgattccctctggtgccaatttcagtgggctaagtccatacaaagc-ttgctctggctttaaacgggccccccgcaagtggacggtgggattggt 1345091  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    |||||||||    |||||||||| ||| |||||||||||||    
T  1345092 ccccttggattagtcgattcttggatcggataccgagtttt 1345132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 15360237 - 15360098
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| | |||| || |||||||||||| |    
T  15360237 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatgggcggtgggattggt 15360139  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  15360138 cccctcggattagtcgattcttggatcggataccgagtttt 15360098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 34147404 - 34147543
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||| ||  || |||||||| ||||||||||| ||    
T  34147404 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgggccccccgcaagtgggcggtgggattggt 34147502  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    |||||||||| ||| |||||||||||||    
T  34147503 cccctcggattagtcgattcttggatcggataccgagtttt 34147543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 34160020 - 34160159
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||| ||  || |||||||| ||||||||||| ||    
T  34160020 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacgggccccccgcaagtgggcggtgggattggt 34160118  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    |||||||||| ||| |||||||||||||    
T  34160119 cccctcggattagtcgattcttggatcggataccgagtttt 34160159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 293 - 431
Target Start/End: Original strand, 28672121 - 28672265
Alignment:
Q  293 tcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcc-tcgcaagtgagcggtgggat 390  Q
    ||||||||||||||||| ||| || ||||||   ||||| ||| ||||||||||||| | | |||||||||||||  || ||||||||| ||||||||||    
T  28672121 tcttaggttcgattccctctggtgtcaattttggtgggctaagtccatacagagctt-gttttggctttaaacgggcccctcgcaagtgggcggtgggat 28672219  T
Q  391 tg-tccccttggat----cgattcttgaatcagataccgagttttt 431  Q
    || |||||| ||||    ||||||||| ||||||||||||||||||    
T  28672220 tggtcccctcggattagtcgattcttggatcagataccgagttttt 28672265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 12390483 - 12390579
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||| ||  || |||||||| ||||||||||||    
T  12390483 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacagggcccccgcaagtgggcggtgggattg 12390579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 17149595 - 17149499
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| ||| ||||||  | |||||| ||||||||||| ||||| |||||||||| || | || ||||||||| |||||||||||    
T  17149595 aggttcgattccctctggtgctaatttcggttggcaagtccatacagagccttgctttggctttaaatggggcccccgcaagtgaacggtgggattg 17149499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 28672068 - 28672108
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttg 242  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  28672068 ttggggttggcctagtggttgacttgagatcttggagtttg 28672108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 12591695 - 12591764
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 366  Q
    ||||||||||||| ||  ||||||||||| ||||| ||| ||||||||||| |||||||||||||||||||    
T  12591695 aggttcgattccctctcgtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacgg 12591764  T

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Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 5360210 - 5360114
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg-agcctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| || |||||||||||  ||||| ||| ||||||||||| |||||||| |||||||||| | || | |||||| ||||||||||||    
T  5360210 aggttcgattccctctaatgccaatttcggtgggctaagtccatacagagc-ttgctctgactttaaacggaacccccacaagtgggcggtgggattg 5360114  T

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Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 15360294 - 15360205
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||| | ||| ||||||||||||    
T  15360294 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgg 15360205  T

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Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 22721775 - 22721851
Alignment:
Q  317 ccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg 392  Q
    ||||||||| |||||| |  |||||| || |||| ||||||||||||| ||||| | ||||||||||||||||||||    
T  22721775 ccaatttcattgggcaggttcatacaaagttttgttctggctttaaacagagcccctgcaagtgagcggtgggattg 22721851  T

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Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 9238967 - 9239065
Alignment:
Q  193 gcaaccgagttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    |||||| | ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  9238967 gcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 9239065  T

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Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 9239033 - 9239171
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatggg-caaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||  ||||  ||| ||||| ||||| ||||| |||||||||| || | || |||||||| ||||||||||| ||    
T  9239033 aggttcgattccctctggtgccaatttcggtgggttaagtccatatagagc-ttgctttggctttaaatggggcccccgcaagtgggcggtgggattggt 9239131  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagttt 429  Q
    ||||| |||    |||||||||| ||| ||||||||||||    
T  9239132 cccctcggattagtcgattcttggatcggataccgagttt 9239171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 239
Target Start/End: Original strand, 8479313 - 8479350
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagt 239  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  8479313 ttggggttggcctagtggttgacttgggatcttggagt 8479350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 10377773 - 10377842
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacgg 366  Q
    |||||| ||||||  || ||||||||||  |||||||| ||||||| |||||||||||| ||| ||||||    
T  10377773 aggttcaattccctatggtgccaatttcggtgggcaagtccatacatagctttgctctgacttaaaacgg 10377842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 12591638 - 12591727
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||| | ||| ||||||| ||||    
T  12591638 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctcgtgccaatttcagtgg 12591727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 315 - 392
Target Start/End: Original strand, 17225743 - 17225820
Alignment:
Q  315 tgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 392  Q
    ||||||||||   ||||||| ||||||||||||||||||| | ||  ||||| ||| ||||| || ||||||||||||    
T  17225743 tgccaatttcggcgggcaagtccatacagagctttgctctcgtttagaacggggccccgcaaatgggcggtgggattg 17225820  T

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Target: chr3 (Bit Score: 52; Significance: 2e-20; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 46576406 - 46576545
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||| ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||| ||||| ||    
T  46576406 aggttcgattccctctggtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtcggattggt 46576504  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    |||||||||    |||||||||| ||| |||||||||||||    
T  46576505 ccccttggattagtcgattcttggatcggataccgagtttt 46576545  T

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Target: chr3; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 1178230 - 1178367
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattgtccc 396  Q
    ||||||||||| ||||| ||||||||||  |||||||| ||||||||| |||||||||||||||||| || ||| | || ||| ||||||||||||  ||    
T  1178230 aggttcgattctccctggtgccaatttcggtgggcaagtccatacagaactttgctctggctttaaatggggccccacacgtgggcggtgggattggtcc 1178329  T
Q  397 cttgga----tcgattcttgaatcagataccgagtttt 430  Q
    || |||    |||| ||||| ||| |||||||||||||    
T  1178330 ctcggattagtcgaatcttggatcggataccgagtttt 1178367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 8456289 - 8456150
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| | ||||||| || ||||||||| |    
T  8456289 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcagtgggattggt 8456191  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||||||| |||||||||||||    
T  8456190 cccctcggattagtcgattcttgaatcggataccgagtttt 8456150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 52821774 - 52821636
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtc 394  Q
    ||||||||||||| ||| ||||||||||  || || ||| ||||||||||||| ||||||||||||||||| ||| || ||||| ||||||||||| |||    
T  52821774 aggttcgattccctctggtgccaatttcggtgagctaagtccatacagagctt-gctctggctttaaacggggccccgtaagtgggcggtgggattggtc 52821676  T
Q  395 cccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    |||| |||    |||||||||| ||| |||||||||||||    
T  52821675 ccctcggattagtcgattcttggatcggataccgagtttt 52821636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 53424315 - 53424177
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtc 394  Q
    |||||||||||||  || ||||||||||  ||||| ||| |||||||||| |||||| |||||||||||||  || |||||||||||||||||||| |||    
T  53424315 aggttcgattccctttggtgccaatttcggtgggctaagtccatacagag-tttgctatggctttaaacgggcccccgcaagtgagcggtgggattggtc 53424217  T
Q  395 cccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    |||| |||    |||||||||| ||| |||||||||||||    
T  53424216 ccctcggattagtcgattcttggatcggataccgagtttt 53424177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 302 - 403
Target Start/End: Original strand, 1242036 - 1242139
Alignment:
Q  302 cgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtcccctt 399  Q
    |||||||| ||| |||||||||   ||||| ||| ||||||||||||||||||||||||||||||| | | |||||||| ||||||| ||| ||||||||    
T  1242036 cgattccctctggtgccaattttggtgggctaagtccatacagagctttgctctggctttaaacggggtcccgcaagtgggcggtggaattggtcccctt 1242135  T
Q  400 ggat 403  Q
    ||||    
T  1242136 ggat 1242139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 15566638 - 15566500
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtc 394  Q
    ||||||||||||| ||  ||||||||||  ||||| ||| ||||||||||||| |||||||||||||||||  || |||||||| ||||||||||| |||    
T  15566638 aggttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccgcaagtgggcggtgggattggtc 15566540  T
Q  395 cccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||  ||    |||||||||| ||| |||||||||||||    
T  15566539 ccctcagattagtcgattcttggatcggataccgagtttt 15566500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 336 - 430
Target Start/End: Complemental strand, 24165813 - 24165715
Alignment:
Q  336 ccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg-tccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||||||||||| ||||||||||||||||| ||| |||||||| |||||||||||| |||||| |||    |||||||||| ||| |||||||||||||    
T  24165813 ccatacagagctt-gctctggctttaaacggggccccgcaagtgggcggtgggattgttcccctcggattagtcgattcttggatcggataccgagtttt 24165715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 35492969 - 35493065
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||||    
T  35492969 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattg 35493065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 30807292 - 30807153
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc--gcaagtgagcggtgggattgt 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| |  ||||||| ||||| ||||||     
T  30807292 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggccccccgcaagtgggcggtaggattgg 30807194  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
     |||| ||||    ||||||||| ||| |||||||||||||    
T  30807193 tccctcggattagtcgattcttggatcggataccgagtttt 30807153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 8097418 - 8097279
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||  ||| |||||| |||||| ||| ||||||||||| | ||||||||||||||||| ||| | ||||||| |||||||||||| |    
T  8097418 aggttcgattccctcttgtgctaatttcgatgggctaagtccatacagagcat-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 8097320  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  8097319 cccctcggattagtcgattcttggatcggataccgagtttt 8097279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 21363001 - 21363140
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| || |||||||  | ||| ||| ||||||||||||| ||||||||||||||||||| || |||||||| ||||||||||| ||    
T  21363001 aggttcgattccctctggtgtcaatttcggtaggctaagtccatacagagctt-gctctggctttaaacggagcccccgcaagtgggcggtgggattggt 21363099  T
Q  394 ccccttgg----atcgattcttgaatcagataccgagtttt 430  Q
     |||| ||    ||||||||||| ||| |||||||||||||    
T  21363100 tccctcggattaatcgattcttggatcggataccgagtttt 21363140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 34492712 - 34492618
Alignment:
Q  299 gttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  34492712 gttcgattccctctgctgccaatttcgttgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 34492618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 40133588 - 40133449
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| || |||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||| ||    
T  40133588 aggttcgattccctctggtgtcaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 40133490  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| | |    |||||||||| ||| |||||||||||||    
T  40133489 cccctcgaattagtcgattcttggatcggataccgagtttt 40133449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 45529893 - 45529755
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| |||  ||||||||| |||||| ||| ||||||||||||| ||||||||||||||| ||  || |||||||| ||||||||||| ||    
T  45529893 aggttcgattccctctggagccaatttcgatgggctaagtccatacagagctt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggt 45529795  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    |||||||||| ||| |||||||||||||    
T  45529794 cccctcggattagtcgattcttg-atcggataccgagtttt 45529755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 49258401 - 49258262
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcg-caagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||  ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| |  |||||| |||||||||||| |    
T  49258401 aggttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtgggcggtgggattggt 49258303  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  49258302 cccctcggattagtcgattcttggatcggataccgagtttt 49258262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 430
Target Start/End: Original strand, 54475779 - 54475878
Alignment:
Q  336 ccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-tccccttggat----cgattcttgaatcagataccgagttt 429  Q
    ||||||||||||| ||| ||||||||||||| ||| | ||||||| |||||||||||| |||||||||||    ||||||||| ||||||||||||||||    
T  54475779 ccatacagagctt-gctttggctttaaacggggccaccgcaagtgggcggtgggattggtccccttggattagtcgattcttggatcagataccgagttt 54475877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 25289853 - 25289715
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattgtc 394  Q
    ||||||||||||| ||  ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||      
T  25289853 aggttcgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 25289755  T
Q  395 cccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    |||| | |    |||||||||| ||| |||||||||||||    
T  25289754 ccctcgaattagtcgattcttggatcggataccgagtttt 25289715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 7470411 - 7470322
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    |||||||| || ||||||||||||||||||||||||||||| || || |||| ||||  |  ||||||||| || || ||||||||||||    
T  7470411 ttggggtttgcctagtggttgacttgagatcttggagtttgctcctccaaaggtctcaggttcgattccctctaatgccaatttcggtgg 7470322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 18177026 - 18176930
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| ||||||||||  ||| | ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||||    
T  18177026 aggttcgattccctctggtgccaatttcggtggactaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattg 18176930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 7470354 - 7470259
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| || |||||||||||  ||||| |||  |||||||||||| ||||||||||||||||| |||  ||||||| || |||||||||    
T  7470354 aggttcgattccctctaatgccaatttcggtgggctaagttcatacagagctt-gctctggctttaaacggggccctgcaagtgggcagtgggattg 7470259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 18177083 - 18177043
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttg 242  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  18177083 ttggggttggcctagtggttgacttgagatcttggagtttg 18177043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 391
Target Start/End: Original strand, 26108350 - 26108445
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt 391  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| || ||||||||    
T  26108350 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggctgtgggatt 26108445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 10190881 - 10190742
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||| ||||||| ||  ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| | |||||||  ||||||||||| |    
T  10190881 aggtttgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtggacggtgggattggt 10190783  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  10190782 cccctcggattagtcgattcttggatcggataccgagtttt 10190742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 202 - 289
Target Start/End: Original strand, 21362944 - 21363031
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggt 289  Q
    ||||||||||| |||||||||||||| |||||||||||||| || || | || ||||  |  ||||||||| | ||||||||||||||    
T  21362944 ttggggttggcctagtggttgacttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggt 21363031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 50583050 - 50583145
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 392  Q
    |||||||||| || ||| ||||||||||  |||| ||| ||||||| | ||||| | || ||||||| |||||| || ||||||||||||||||||    
T  50583050 aggttcgatttcctctgttgccaatttcgttgggtaagtccatacaaaactttgatttgactttaaatggagccccgtaagtgagcggtgggattg 50583145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 53234049 - 53233911
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggatt-gt 393  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||| ||||||| ||| | ||||||| ||||||||||| ||    
T  53234049 aggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctctaaacggggcccccgcaagtgggcggtgggattggt 53233951  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    |||||||||| ||| |||||||||||||    
T  53233950 cccctcggattagtcgattcttg-atcggataccgagtttt 53233911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 15566692 - 15566606
Alignment:
Q  205 gggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    |||||||| ||||||||| ||||||||||||||||||| || || | || ||||  |  ||||||||| ||||| ||||||||||||    
T  15566692 gggttggcctagtggttggcttgagatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgg 15566606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 292
Target Start/End: Original strand, 30257625 - 30257715
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgga 292  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||||| ||| |||||||| ||||    
T  30257625 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcgatgga 30257715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 300 - 392
Target Start/End: Complemental strand, 45272552 - 45272459
Alignment:
Q  300 ttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    |||||||||| ||| ||||||||||  ||||| ||| |||||| |||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  45272552 ttcgattccctctggtgccaatttcggtgggctaagtccatacggagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 45272459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 7485721 - 7485632
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| |||||||||||||| |||||||||||||| || || |||| ||||  |  ||||||||| |  || ||||||||||||    
T  7485721 ttggggttggcatagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctgatgccaatttcggtgg 7485632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 40133645 - 40133556
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| ||| |||||||||| || || |||| ||||  |  ||||||||| | ||||||||||||||||    
T  40133645 ttggggttggcctagtggttggcttgggattttggagtttgctcctccaaaggtctcaggttcgattccctctggtgtcaatttcggtgg 40133556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 48977389 - 48977478
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| |||||||||||||| |||||||||||||| || || |||| ||||  |  ||||||| | | ||| ||||||||||||    
T  48977389 ttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccttctggtgccaatttcggtgg 48977478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 48977446 - 48977542
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg 392  Q
    ||||||||||||  ||| ||||||||||  ||||  ||| ||||||||||||| ||||||||||||||||| ||| | ||||||| ||||||||||||    
T  48977446 aggttcgattccttctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaacggggcccctgcaagtgggcggtgggattg 48977542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 53424372 - 53424283
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||||| ||| ||||||||||||    
T  53424372 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgg 53424283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 4462634 - 4462674
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttg 242  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  4462634 ttggggttggcctagtggttggcttgagatcttggagtttg 4462674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 347 - 430
Target Start/End: Original strand, 24407369 - 24407458
Alignment:
Q  347 tttgctctggctttaaacggagcc-tcgcaagtgagcggtgggattg-tccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||||||| |||||||||| ||| ||||||||| |||||||||||| |||||| ||||    ||||||||| ||| |||||||||||||    
T  24407369 tttgctctgactttaaacggggccatcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagtttt 24407458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 10083958 - 10083819
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcg-caagtgagcggtgggattg-t 393  Q
    ||||| ||||||| ||  ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| |  ||||||  ||||||||||| |    
T  10083958 aggtttgattccctctagtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccacaagtggacggtgggattggt 10083860  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  10083859 cccctcggattagtcgattcttggatcggataccgagtttt 10083819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 285
Target Start/End: Complemental strand, 25344253 - 25344170
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaattt 285  Q
    ||||||||||| |||||||||||||| |||||| ||||||| || || | |||||||  |   |||||||||| ||||||||||    
T  25344253 ttggggttggcctagtggttgacttgggatcttcgagtttgctcctccagagatctcaggtttgattccctttggtgtcaattt 25344170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 26174171 - 26174310
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    |||||||||| || ||| ||||||||||  ||||  ||| ||||||||||||| ||||||||||||||  | ||| | ||||||| |||||||||||| |    
T  26174171 aggttcgatttcctctggtgccaatttcggtgggttaagtccatacagagctt-gctctggctttaaatagggcccccgcaagtgggcggtgggattggt 26174269  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  26174270 cccctcggattagtcgattcttggatcggataccgagtttt 26174310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 30257682 - 30257821
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    |||||||||||||  || |||||||||| |||| | ||| ||||||||||| |||||||||||||||| || | || |||||||| ||||||| ||| ||    
T  30257682 aggttcgattccctttggtgccaatttcgatggactaagtccatacagagc-ttgctctggctttaaatggggcccccgcaagtgggcggtggcattggt 30257780  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    |||||||||| ||| |||||||| ||||    
T  30257781 cccctcggattagtcgattcttggatcggataccgaatttt 30257821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 205 - 291
Target Start/End: Original strand, 32151428 - 32151514
Alignment:
Q  205 gggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    |||||||| |||||||||||||| |||||||||||||| || || |||| | || |   |||||| || ||||| ||||||||||||    
T  32151428 gggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtttcaaattcgattctctctagtgccaatttcggtgg 32151514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 2511436 - 2511340
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcct-cgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| ||||||||||  ||||| |||  |||||||||| | |||||| ||||||||||  ||| |||||||| ||||||||||||    
T  2511436 aggttcgattccctctggtgccaatttcggtgggctaagttcatacagagc-tcgctctgactttaaacgggacctccgcaagtgggcggtgggattg 2511340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 239
Target Start/End: Complemental strand, 4252592 - 4252555
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagt 239  Q
    ||||||||||| ||||||||| ||||||||||||||||    
T  4252592 ttggggttggcctagtggttggcttgagatcttggagt 4252555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 25289910 - 25289821
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||  ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| ||||| ||||||||||||    
T  25289910 ttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctagtgccaatttcggtgg 25289821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 30807349 - 30807260
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  30807349 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 30807260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 35492912 - 35493001
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  35492912 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 35493001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 215 - 292
Target Start/End: Original strand, 49167070 - 49167147
Alignment:
Q  215 agtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgga 292  Q
    |||||||| ||||||||||||||||||| || || |||||| ||  |  |||||| || | |||||||||||||||||    
T  49167070 agtggttggcttgagatcttggagtttgctcctccaaagatatcaggttcgattctctctggtgtcaatttcggtgga 49167147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 5e-18; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 22119950 - 22120089
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||| ||    
T  22119950 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt 22120048  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    |||||||||| ||| |||||||||||||    
T  22120049 cccctcggattagtcgattcttggatcggataccgagtttt 22120089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 40543049 - 40542910
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| | ||||||| |||||||||||| |    
T  40543049 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 40542951  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  40542950 cccctcggattagtcgattcttggatcggataccgagtttt 40542910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 654843 - 654705
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt-gtc 394  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| |||||||||||||||||  || |||||||| ||||||||||| |||    
T  654843 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgggcccccgcaagtgggcggtgggattggtc 654745  T
Q  395 cccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    |||| |||    ||| |||||| ||| |||||||||||||    
T  654744 ccctcggattagtcggttcttggatcggataccgagtttt 654705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 291 - 430
Target Start/End: Original strand, 21835207 - 21835352
Alignment:
Q  291 gatcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtggg 388  Q
    ||||| ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||    
T  21835207 gatctcaggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtggg 21835305  T
Q  389 att-gtccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||| ||||||| |||    |||||||||| ||| |||| ||||||||    
T  21835306 attggtcccctcggattagtcgattcttggatcggatatcgagtttt 21835352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 297 - 431
Target Start/End: Original strand, 7275339 - 7275479
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||| | ||| | ||||||| |||||||||||| |    
T  7275339 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacagggcccccgcaagtgggcggtgggattggt 7275437  T
Q  394 ccccttggat----cgattcttgaatcagataccgagttttt 431  Q
    ||||| ||||    ||||||||| ||| ||||||||||||||    
T  7275438 cccctcggattagtcgattcttggatcggataccgagttttt 7275479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 2751333 - 2751472
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || ||||| || ||||||||||| ||    
T  2751333 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaaatgggcggtgggattggt 2751431  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    |||||||||| ||| |||||||||||||    
T  2751432 cccctcggattagtcgattcttggatcggataccgagtttt 2751472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 7176001 - 7175862
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||| ||| || |||||||| ||||||||||| ||    
T  7176001 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacaggacccccgcaagtgggcggtgggattggt 7175903  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    |||||||||| ||| ||||| |||||||    
T  7175902 cccctcggattagtcgattcttggatcggatactgagtttt 7175862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 299 - 430
Target Start/End: Complemental strand, 17197087 - 17196950
Alignment:
Q  299 gttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gtcc 395  Q
    ||||||||||| ||| ||||||||||  || || ||| ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||| ||||    
T  17197087 gttcgattccctctggtgccaatttcggtgagctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 17196989  T
Q  396 ccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||| | |    |||||||||| ||| |||||||||||||    
T  17196988 cctcgaattagtcgattcttggatcggataccgagtttt 17196950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 23330878 - 23330809
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacgg 366  Q
    |||||||| |||| | | ||||||||||  |||||||| |||||||||||||||||||||||| ||||||    
T  23330878 aggttcgactccctccggtgccaatttcggtgggcaagtccatacagagctttgctctggcttaaaacgg 23330809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 29861732 - 29861828
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||| | ||||||||||||||||||| | || |||||||| ||||||||||||    
T  29861732 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagaac-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattg 29861828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 28647031 - 28647127
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| ||||||||||  |||||||| | |||||||| |||||||||||||  ||||| | || | |||||| ||||||||||||    
T  28647031 aggttcgattccctctggtgccaatttcggtgggcaagtcaatacagagttttgctctggcttataacggggcccccacaagtgggcggtgggattg 28647127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 202 - 245
Target Start/End: Original strand, 1469117 - 1469160
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttc 245  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||    
T  1469117 ttggggttggcctagtggttgacttgaaatcttggagtttgttc 1469160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 291 - 362
Target Start/End: Complemental strand, 8435840 - 8435769
Alignment:
Q  291 gatcttaggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaa 362  Q
    |||||||||||||||| || ||| ||||||||||  |||||||| ||||||| ||||||| | |||||||||    
T  8435840 gatcttaggttcgatttcctctggtgccaatttcggtgggcaagtccatacaaagctttgttttggctttaa 8435769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 10091250 - 10091388
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| |||  |||||||||  ||||| ||| ||||||||||||| |||||||||||||| || | || |||||||| |||||||||||| |    
T  10091250 aggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggtccccgcaagtgggcggtgggattgat 10091348  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    |||||||||| ||| |||||||||||||    
T  10091349 cccctcggattagtcgattcttg-atccgataccgagtttt 10091388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 21217972 - 21217833
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||||||||||||||  ||||| ||| ||||||||||| ||||||| ||||||||| ||  || | |||||| |||||||||||| |    
T  21217972 aggttcgattccctctgatgccaatttcggtgggctaagtccatacagagc-ttgctctagctttaaacgggccccccacaagtgggcggtgggattgat 21217874  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    | |||||||| ||| |||||||||||||    
T  21217873 cccctcggattagttgattcttggatcggataccgagtttt 21217833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 2103117 - 2103213
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg 392  Q
    ||||||||||||| |||  |||||||||  ||||| ||| ||||||||||||| |||||||||||||| || ||| | ||||||| ||||||||||||    
T  2103117 aggttcgattccctctggagccaatttcggtgggctaagtccatacagagctt-gctctggctttaaatggggcccccgcaagtgggcggtgggattg 2103213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 2751276 - 2751365
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||| | ||| ||||||||||||    
T  2751276 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgg 2751365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 22703548 - 22703644
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| || |||||||  ||||| ||| ||||||| ||||| ||||||||||||||| ||| || |||||||| ||||||||||||    
T  22703548 aggttcgattccctctggtgtcaatttcggtgggctaagtccatacaaagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattg 22703644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 293 - 431
Target Start/End: Complemental strand, 22643485 - 22643341
Alignment:
Q  293 tcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggat 390  Q
    ||||| |||||||| || |||||| |||||||  | ||| ||| ||||||||||||| |||||| |||||||||||| |||||||||||  ||||| |||    
T  22643485 tcttatgttcgatttcctctgatgtcaatttcggtaggctaagtccatacagagctt-gctctgactttaaacggagccctcgcaagtggccggtgtgat 22643387  T
Q  391 t-gtccccttgg----atcgattcttgaatcagataccgagttttt 431  Q
    | ||||||| ||    ||||||||||  |||||||||| |||||||    
T  22643386 tagtcccctcggattaatcgattctttgatcagataccaagttttt 22643341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 28089821 - 28089861
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttg 242  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  28089821 ttggggttggcctagtggttggcttgagatcttggagtttg 28089861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 348 - 430
Target Start/End: Original strand, 3851870 - 3851958
Alignment:
Q  348 ttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-tccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||||| |||||| ||||    ||||||||| ||| |||||||||||||    
T  3851870 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatcccctcggattagtcgattcttggatcggataccgagtttt 3851958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 299 - 392
Target Start/End: Complemental strand, 9718124 - 9718030
Alignment:
Q  299 gttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||| ||| || ||||||| |||||| ||| ||||| ||||||| ||||||||||||||||| | |||| ||| |||||||||| ||||    
T  9718124 gttcgattccctctggtgtcaatttcgatgggctaagtccatagagagctt-gctctggctttaaacggggccctcacaaatgagcggtggaattg 9718030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 11997911 - 11998050
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||  | ||| ||| ||||||| ||| ||||||||||||||||| ||  || |||||||| ||||||||||| ||    
T  11997911 aggttcgattccctctggtgccaatttcggttggctaagtccatacatagc-ttgctctggctttaaactgggcccccgcaagtgggcggtgggattggt 11998009  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| | |    |||||||||| ||| |||||||||||||    
T  11998010 cccctcgaattagtcgattcttggatcggataccgagtttt 11998050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 27312214 - 27312353
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||  |||||||||| ||| || ||| ||||||||||||   ||||| |||||||||||||| | ||||||| ||||||||||| ||    
T  27312214 aggttcgattccctctagtgccaatttcgatgtgccaagtccatacagagctac-ctctgactttaaacggagcccccgcaagtgggcggtgggattggt 27312312  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    |||||  ||    |||||||||| ||| |||||||||||||    
T  27312313 cccctcagattagtcgattcttggatcggataccgagtttt 27312353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 363
Target Start/End: Original strand, 1469174 - 1469240
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 363  Q
    |||||||||| ||  | ||||||||||| ||||||||| ||||||| |||||| || ||||||||||    
T  1469174 aggttcgatttcctttaatgccaatttcgatgggcaagtccatacaaagctttactttggctttaaa 1469240  T

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Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 18044169 - 18044238
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 366  Q
    ||||||||||||| ||  ||||||||||  ||||| ||| ||||||||||||| |||||||||||||||||    
T  18044169 aggttcgattccctcttgtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacgg 18044238  T

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Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 202 - 244
Target Start/End: Complemental strand, 38864642 - 38864600
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgtt 244  Q
    ||||||||| | ||||||||||||||||||||| |||||||||    
T  38864642 ttggggttgacctagtggttgacttgagatctttgagtttgtt 38864600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 193 - 291
Target Start/End: Complemental strand, 40543115 - 40543017
Alignment:
Q  193 gcaaccgagttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    |||||| | ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  40543115 gcaacccatttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 40543017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 7176058 - 7175969
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  7176058 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 7175969  T

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Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 7275282 - 7275371
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  7275282 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 7275371  T

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Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 22119893 - 22119982
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  22119893 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 22119982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 348 - 392
Target Start/End: Original strand, 22638401 - 22638446
Alignment:
Q  348 ttgctctggctttaaacggagcct-cgcaagtgagcggtgggattg 392  Q
    ||||||||||||||||||| |||| |||||||| ||||||||||||    
T  22638401 ttgctctggctttaaacggggcctccgcaagtgggcggtgggattg 22638446  T

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Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 351 - 431
Target Start/End: Complemental strand, 31712987 - 31712901
Alignment:
Q  351 ctctggctttaaacgg-agcctcgcaagtgagcggtgggattg-tccccttggat----cgattcttgaatcagataccgagttttt 431  Q
    |||||||||||| ||| | ||||||||||| |||||||||||| |||||| ||||    ||||||||| ||| ||||||||||||||    
T  31712987 ctctggctttaagcgggaccctcgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttttt 31712901  T

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Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 32849596 - 32849685
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    |||||||| || |||||||||||||| |||||||||||||| || || | || ||||| |   |||||||| |||| ||||||| |||||    
T  32849596 ttggggttagcctagtggttgacttgggatcttggagtttgctcctccagaggtctcgggtttgattccctctagtctcaattttggtgg 32849685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 365
Target Start/End: Complemental strand, 41907652 - 41907584
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacg 365  Q
    ||||||||||| | ||| ||||||||||| ||||| ||| ||||||||||  ||||||||||||||||||    
T  41907652 aggttcgattctctctggtgccaatttcagtgggctaagtccatacagag-gttgctctggctttaaacg 41907584  T

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Target: chr2 (Bit Score: 48; Significance: 5e-18; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 8192490 - 8192395
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| ||||||| ||  |||||||| ||||| ||||||||||||||||||  |||||  ||||||||||| ||||||||||||    
T  8192490 aggttcgattccctctggtgccaatgtcggtgggcaagtccatatagagctttgctctggcttagaacggcccctcgcaagtgggcggtgggattg 8192395  T

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Target: chr2; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 33827712 - 33827573
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| |||||||||||||||||  || | ||||||| |||||||||||| |    
T  33827712 aggttcgattccctctggtgccaatttcgttgggctaagtccatacagagctt-gctctggctttaaacgggacccctgcaagtgggcggtgggattggt 33827614  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||||||||    ||||||||| ||| |||||||||||||    
T  33827613 ccccttggattagtcgattcttggatcggataccgagtttt 33827573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 35171858 - 35171997
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| |||   ||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| | ||||||| |||||||||||| |    
T  35171858 aggttcgattccctctggcaccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattggt 35171956  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||||||| |||||||||||||    
T  35171957 cccctcggattagtcgattcttgaatcggataccgagtttt 35171997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 364
Target Start/End: Complemental strand, 3405291 - 3405224
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaac 364  Q
    ||||||||||||| ||| ||||||||| |||||||||| ||||||| |||||| |||| |||||||||    
T  3405291 aggttcgattccctctggtgccaattttaatgggcaagtccatacaaagctttactctagctttaaac 3405224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 15038017 - 15038156
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    |||||||||||||  || ||||||||||  ||||| ||| ||||||||||||| ||| ||||||||||||||| || |||||||| ||||||||||| ||    
T  15038017 aggttcgattccctttggtgccaatttcggtgggctaagtccatacagagctt-gctttggctttaaacggagcccccgcaagtgggcggtgggattggt 15038115  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    |||||  ||    |||||||||| ||| |||||||||||||    
T  15038116 cccctcagattagtcgattcttggatcggataccgagtttt 15038156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 19174821 - 19174916
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||  ||| ||||||||||  |||| | | ||||||||||||||||||||||||  ||||||||| || || || ||||||||||||    
T  19174821 aggttcgattccttctggtgccaatttcggtgggtaggtccatacagagctttgctctggcttagaacggagccccgtaaatgggcggtgggattg 19174916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 299 - 384
Target Start/End: Original strand, 45271444 - 45271530
Alignment:
Q  299 gttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcgg 384  Q
    ||||||||||| ||| ||||||||||| ||||| ||| ||||||||||| |||||||||||||||||| |||| | ||||||||||||    
T  45271444 gttcgattccctctggtgccaatttcagtgggctaagtccatacagagc-ttgctctggctttaaacgaagcccctgcaagtgagcgg 45271530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 15037960 - 15038049
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| |||||||||||| | |||||||||||||| || || |||| ||||  |  ||||||||||| ||| ||||||||||||    
T  15037960 ttggggttggcctagtggttgactcgggatcttggagtttgctcctccaaaggtctcaggttcgattccctttggtgccaatttcggtgg 15038049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 10582129 - 10582035
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||| |||||||||||  ||||||||||| || |||||||||    
T  10582129 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctagctttaaacgggccctcgcaagtgggc-gtgggattg 10582035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 24196062 - 24196156
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| ||| ||||||  ||||| ||| ||||||||| ||| ||||||||||||||||| ||| |||||||| ||||||||||||    
T  24196062 aggttcgattccctctggtgcaaatttcggtgggctaagtccatacagaactt-gctctggctttaaacgg-gccccgcaagtgggcggtgggattg 24196156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 336 - 430
Target Start/End: Complemental strand, 11941309 - 11941210
Alignment:
Q  336 ccatacagagctttgctctggctttaaacgg-agcctcgcaagtgagcggtgggattg-tccccttggat----cgattcttgaatcagataccgagttt 429  Q
    ||||||||||||| ||||||||||||||||| | || |||||||| |||||||||||| |||||| ||||    ||||||||| ||| ||||||||||||    
T  11941309 ccatacagagctt-gctctggctttaaacgggacccccgcaagtgggcggtgggattggtcccctcggattagtcgattcttggatcggataccgagttt 11941211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 391
Target Start/End: Original strand, 17324824 - 17324918
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggatt 391  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| |||||||||||||||| ||  || | |||||| |||||||||||    
T  17324824 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaatgggcccccacaagtgggcggtgggatt 17324918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 44946192 - 44946053
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    |||||||||||||  || ||||||||||  ||||| ||| ||||||||| ||| |||||||||||||||||  || | ||||||| |||||||||||| |    
T  44946192 aggttcgattccctttggtgccaatttcggtgggctaagtccatacagaactt-gctctggctttaaacgggccccccgcaagtgggcggtgggattggt 44946094  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  44946093 cccctcggattagtcgattcttggatcggataccgagtttt 44946053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 44976293 - 44976196
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag--cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| |||||||||   ||||| ||| |||||||||| |||||||||||||||||||| |  || |||||||| ||||||||||||    
T  44976293 aggttcgattccctctggtgccaattttggtgggctaagtccatacagag-tttgctctggctttaaacggggctccccgcaagtgggcggtgggattg 44976196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 363
Target Start/End: Complemental strand, 4618824 - 4618758
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 363  Q
    |||||||||| |||||| ||||||||||   ||||||| ||||||| | ||||||||||||||||||    
T  4618824 aggttcgatttcccctggtgccaatttcggcgggcaagtccatacaaaactttgctctggctttaaa 4618758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 5394075 - 5394171
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcc-tcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| || ||||||| |||||| ||| |||||||||| ||||||||| ||||||| || |||  |||||||| ||||||||||||    
T  5394075 aggttcgattccctctggtgtcaatttcgatgggctaagtccatacagag-tttgctctgactttaaatggggccgccgcaagtgggcggtgggattg 5394171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 18708535 - 18708604
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacgg 366  Q
    |||||||| |||| ||||| ||||||||| |||||| |  ||||||||||||||||||| ||| ||||||    
T  18708535 aggttcgactccctctgataccaatttcagtgggcatgttcatacagagctttgctctgacttaaaacgg 18708604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 30466969 - 30466830
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaa-cggagcctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| |||||||||||||| |||  || |||||||| || |||||||| ||    
T  30466969 aggttcgattctctctgctgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaaccgggcccccgcaagtgggcagtgggattggt 30466871  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||| | |||    |||||||||| ||| |||||||||||||    
T  30466870 cccttcggattagtcgattcttggatcggataccgagtttt 30466830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 403
Target Start/End: Original strand, 3943838 - 3943906
Alignment:
Q  336 ccatacagagctttgctctggctttaaacggagc-ctcgcaagtgagcggtgggatt-gtccccttggat 403  Q
    ||||||||||||| ||||||||||||||||| || | |||||||| | ||||||||| ||||||||||||    
T  3943838 ccatacagagctt-gctctggctttaaacggggctcccgcaagtgggtggtgggattggtccccttggat 3943906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 242
Target Start/End: Complemental strand, 18976630 - 18976581
Alignment:
Q  193 gcaaccgagttggggttggcgtagtggttgacttgagatcttggagtttg 242  Q
    |||||| | ||||||||||| ||||||||| |||| ||||||||||||||    
T  18976630 gcaacccatttggggttggcctagtggttggcttgggatcttggagtttg 18976581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 293 - 346
Target Start/End: Complemental strand, 28194276 - 28194223
Alignment:
Q  293 tcttaggttcgattccccctgatgccaatttcaatgggcaaggccatacagagc 346  Q
    ||||||||||||||| | ||| ||||||||||  |||||||| |||||||||||    
T  28194276 tcttaggttcgattctctctggtgccaatttcggtgggcaagtccatacagagc 28194223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 36242451 - 36242355
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| || |||||||  ||||| ||| |||  |||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  36242451 aggttcgattccctctggtgtcaatttcggtgggctaagtccagccagagctt-gctctggctttaaacggggtccccgcaagtgggcggtgggattg 36242355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 41313993 - 41314082
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||| |||||||||||  ||| |||||||||||||| || || | || ||||  |  ||||||||| | ||||||||||||||||    
T  41313993 ttggggttgccgtagtggttggtttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgtcaatttcggtgg 41314082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 44946249 - 44946160
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||  ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||||| ||| ||||||||||||    
T  44946249 ttggggttggtctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctttggtgccaatttcggtgg 44946160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 5e-18; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 4621376 - 4621237
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| |||||||||||| |    
T  4621376 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggtccccgcaagtgggcggtgggattggt 4621278  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  4621277 cccctcggattagtcgattcttggatcggataccgagtttt 4621237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 24122081 - 24122220
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagc-ctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| || | |||||||| ||||||||||| ||    
T  24122081 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggctcccgcaagtgggcggtgggattggt 24122179  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| |||    |||||||||| ||| |||||||||||||    
T  24122180 cccctcggattagtcgattcttggatcggataccgagtttt 24122220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 297 - 403
Target Start/End: Original strand, 32729603 - 32729710
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg-tc 394  Q
    |||||||||||||  || ||||||||||  |||||||| ||||||||||| |||||||||||||||| || | || |||||||| |||||||||||| ||    
T  32729603 aggttcgattccctatggtgccaatttcggtgggcaagtccatacagagc-ttgctctggctttaaatggggtccccgcaagtgggcggtgggattgatc 32729701  T
Q  395 cccttggat 403  Q
    |||||||||    
T  32729702 cccttggat 32729710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 24674451 - 24674547
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||||    
T  24674451 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattg 24674547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 7766866 - 7766727
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||| ||| ||||||  ||||| ||| ||||||||||||| |||||| |||||||||| ||| | ||||||| |||||||||||| |    
T  7766866 aggttcgattccctctggtgctaatttcggtgggctaagtccatacagagctt-gctctgactttaaacggggcccccgcaagtgggcggtgggattggt 7766768  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||||||| |||| ||||||||    
T  7766767 cccctcggattagtcgattcttgaatcggatatcgagtttt 7766727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 46607811 - 46607900
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| |||||||||||||| |||||||||||||| || || |||| ||||  |  ||||||||| | ||| ||||||||||||    
T  46607811 ttggggttggcctagtggttgacttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgg 46607900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 431
Target Start/End: Complemental strand, 7197385 - 7197246
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggatt-gtc 394  Q
    ||||||||||||| ||||||||||||||  |||| ||| | ||||||| | ||||||||||||||||||  ||| | ||||||| |||||| |||| |||    
T  7197385 aggttcgattccctctgatgccaatttcggtgggtaagtcaatacaga-ccttgctctggctttaaacgaggcccctgcaagtgggcggtgagattggtc 7197287  T
Q  395 cccttgga----tcgattcttgaatcagataccgagttttt 431  Q
    |||| |||    ||||||| || ||| ||||||||||||||    
T  7197286 ccctcggattagtcgattcatggatcggataccgagttttt 7197246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 348 - 430
Target Start/End: Complemental strand, 8254840 - 8254752
Alignment:
Q  348 ttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-tccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||||| |||||||| ||    ||||||||||||| |||||||||||||    
T  8254840 ttgctctggctttaaacggggcccccgcaagtgggcggtgggattgatccccttgaattagtcgattcttgaatcggataccgagtttt 8254752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 15059541 - 15059402
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| | || |||||||| |||||| |||| ||    
T  15059541 aggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggtccccgcaagtgggcggtgagattggt 15059443  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||||| | |    |||||||||| ||| |||||||||||||    
T  15059442 cccctcgaattagtcgattcttggatcggataccgagtttt 15059402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 355
Target Start/End: Original strand, 1486476 - 1486534
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctg 355  Q
    |||||||||||||  || |||||||||| ||||| ||| ||||||||||||||||||||    
T  1486476 aggttcgattccctttggtgccaatttcgatgggtaagtccatacagagctttgctctg 1486534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 370
Target Start/End: Complemental strand, 9500494 - 9500421
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcc 370  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| |||||||||||||||||||||    
T  9500494 aggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggagcc 9500421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 8077705 - 8077801
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 392  Q
    ||||||||||| | ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||| ||  || |||||||| ||||||||||||    
T  8077705 aggttcgattctctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacagggcccccgcaagtgggcggtgggattg 8077801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 242
Target Start/End: Original strand, 47091691 - 47091731
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttg 242  Q
    ||||||||||| ||||||||| |||||||||||||||||||    
T  47091691 ttggggttggcctagtggttggcttgagatcttggagtttg 47091731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 16539666 - 16539761
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaagtgagcggtgggattg 392  Q
    ||||| ||||||| ||| |||||||||   |||||||| |||||||||||||||| |||||||  ||||| |||  | ||||| | ||||||||||    
T  16539666 aggtttgattccctctggtgccaattttggtgggcaagtccatacagagctttgcgctggcttagaacggggccctgtaagtgggtggtgggattg 16539761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 297 - 356
Target Start/End: Original strand, 16899561 - 16899620
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctgg 356  Q
    ||||||||||||| ||| ||||||||||  ||||| || ||||||| |||||||||||||    
T  16899561 aggttcgattccctctggtgccaatttcggtgggccagtccatacaaagctttgctctgg 16899620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 429
Target Start/End: Original strand, 17935827 - 17935965
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||  ||  ||||||||||  ||||| ||| |||||||||| |||||||||||||||||||| | || |||||||| ||| ||||||| ||    
T  17935827 aggttcgattccttctagtgccaatttcggtgggctaagtccatacagag-tttgctctggctttaaacggggcccccgcaagtgggcgatgggattggt 17935925  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagttt 429  Q
    || || |||    |||||||||| ||| ||||||||||||    
T  17935926 ccactcggattagtcgattcttggatcggataccgagttt 17935965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 19034525 - 19034467
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctg 355  Q
    ||||||||||  | ||| ||||||||||  |||||||| ||||||||||||||||||||    
T  19034525 aggttcgattatctctggtgccaatttcggtgggcaagtccatacagagctttgctctg 19034467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 23734174 - 23734243
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 366  Q
    ||||||||||||| ||||||||||||||  ||||| ||| |||||||||| |||||| || ||||||||||    
T  23734174 aggttcgattccctctgatgccaatttcggtgggctaagtccatacagag-tttgctatgcctttaaacgg 23734243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 23741366 - 23741435
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 366  Q
    ||||||||||||| ||||||||||||||  ||||| ||| |||||||||| |||||| || ||||||||||    
T  23741366 aggttcgattccctctgatgccaatttcggtgggctaagtccatacagag-tttgctatgcctttaaacgg 23741435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 355
Target Start/End: Complemental strand, 25237128 - 25237070
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctg 355  Q
    ||||||||||||| ||  ||||||||||  |||||||| |||||||||| |||||||||    
T  25237128 aggttcgattccctctagtgccaatttcggtgggcaagtccatacagagttttgctctg 25237070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 27455005 - 27454936
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 366  Q
    ||||||||||| | ||||||||||||||  || || ||| ||||||||||| |||||||||||||||||||    
T  27455005 aggttcgattcactctgatgccaatttcggtgagctaagtccatacagagc-ttgctctggctttaaacgg 27454936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 336 - 429
Target Start/End: Original strand, 34778437 - 34778535
Alignment:
Q  336 ccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-tccccttggat----cgattcttgaatcagataccgagttt 429  Q
    |||||||||| |||||| ||||||||||||| ||| | |||||||  ||||||||||| |||||||||||    ||||||||| ||| ||||||||||||    
T  34778437 ccatacagag-tttgctttggctttaaacggggcccccgcaagtggacggtgggattggtccccttggattagtcgattcttggatcggataccgagttt 34778535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 206 - 291
Target Start/End: Original strand, 1378903 - 1378988
Alignment:
Q  206 ggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||| |||||||||||||| |||||||||||||| || || |||  ||||  |  ||||| ||| | ||||||||||||||||    
T  1378903 ggttggcttagtggttgacttgggatcttggagtttgctcctccaaaagtctcatgttcgatttcctctggtgtcaatttcggtgg 1378988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 4621433 - 4621344
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  4621433 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 4621344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 24674394 - 24674483
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || | || ||||  |  ||||||||| | ||| ||||||||||||    
T  24674394 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccagaggtctcaggttcgattccctctggtgccaatttcggtgg 24674483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 30677234 - 30677330
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg-agcctcgcaagtgagcggtgggattg 392  Q
    ||||| ||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||| |||||||||| || | || |||||||| ||||||||||||    
T  30677234 aggtttgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctttggctttaaatgggacccccgcaagtgggcggtgggattg 30677330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 297 - 392
Target Start/End: Original strand, 46607868 - 46607964
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg-agcctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| |||||||| ||||||| ||   || |||||||| ||||||||||||    
T  46607868 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctgactttaaaaggcccccccgcaagtgggcggtgggattg 46607964  T

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Target: scaffold0070 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 40383 - 40521
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattgtc 394  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| ||||||||||||||||||| | || |||||||| ||||||||||||      
T  40383 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctggctttaaacggggcccccgcaagtgggcggtgggattggt 40481  T
Q  395 cccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    |||| |||    |||||||||| ||| |||||||||||||    
T  40482 ccctcggattagtcgattcttggatcggataccgagtttt 40521  T

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Target: scaffold0576 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 5221 - 5082
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||||||||| ||| | |||| || |||||||||||| |    
T  5221 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggctttaaacggggcccccgcaaatgggcggtgggattggt 5123  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| ||| |||||||||||||    
T  5122 cccctcggattagtcgattcttggatcggataccgagtttt 5082  T

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Target: scaffold0576; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 5278 - 5189
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| |||||||||||||| || || |||| ||||  |  ||||||||| | ||| ||||||||||||    
T  5278 ttggggttggcctagtggttggcttgggatcttggagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgg 5189  T

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Target: scaffold0019 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 297 - 430
Target Start/End: Original strand, 161867 - 162006
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-t 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||||| ||||||||||| || || ||| | ||||||| |||||||||||| |    
T  161867 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagctt-gctctggcttttaatggggcccccgcaagtgggcggtgggattggt 161965  T
Q  394 ccccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||||| ||||    ||||||||| |||||||||||||||||    
T  161966 cccctcggattagtcgattcttggatcagataccgagtttt 162006  T

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Target: scaffold0217 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 291 - 430
Target Start/End: Complemental strand, 7454 - 7309
Alignment:
Q  291 gatcttaggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtggg 388  Q
    ||||| ||||||||||||| | | ||||||||||  ||||| ||| |||||||||||||| |||||||||||||||| | || |||||||| ||||||||    
T  7454 gatctcaggttcgattccctccggtgccaatttcggtgggctaagtccatacagagcttt-ctctggctttaaacggggcccccgcaagtgggcggtggg 7356  T
Q  389 att-gtccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    ||| ||||||| |||    |||||||||| ||| |||||| ||||||    
T  7355 attggtcccctcggattagtcgattcttggatcggataccaagtttt 7309  T

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Target: scaffold0160 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 293 - 376
Target Start/End: Complemental strand, 29285 - 29202
Alignment:
Q  293 tcttaggttcgattccccctgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaacggagcctcgcaa 376  Q
    ||||||||||||||||| ||||||||| ||||  | || ||| |||||||||||||||||||||||| ||| ||| || |||||    
T  29285 tcttaggttcgattcccgctgatgccattttcggtcggtaagtccatacagagctttgctctggcttaaaatggacccccgcaa 29202  T

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Target: scaffold0102 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 299 - 430
Target Start/End: Original strand, 39152 - 39289
Alignment:
Q  299 gttcgattccccctgatgccaatttcaatgggcaagg-ccatacagagctttgctctggctttaaacggagcctc-gcaagtgagcggtgggattg-tcc 395  Q
    ||||||||||| ||| ||||||||||  ||||| | | ||||||||| ||| | ||||||||||||||| ||| | ||||||| |||||||||||| |||    
T  39152 gttcgattccctctggtgccaatttcggtgggctatgtccatacagaactt-gttctggctttaaacggggcccccgcaagtgggcggtgggattggtcc 39250  T
Q  396 ccttggat----cgattcttgaatcagataccgagtttt 430  Q
    ||| ||||    ||||||||| |||||||||||||||||    
T  39251 cctcggattagtcgattcttggatcagataccgagtttt 39289  T

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Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 297 - 392
Target Start/End: Complemental strand, 97505 - 97409
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaac-ggagcctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||| ||||||||||  ||||| ||| ||||||||||| |||||||| |||||||| ||| || |||||||| ||||||||||||    
T  97505 aggttcgattccctctggtgccaatttcggtgggctaagtccatacagagc-ttgctctgactttaaacgggacccccgcaagtgggcggtgggattg 97409  T

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Target: scaffold0026; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 291
Target Start/End: Complemental strand, 97562 - 97473
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttgttcgtcaaaagatctcgagcacgattccctttagtgtcaatttcggtgg 291  Q
    ||||||||||| ||||||||| |||| ||||||| |||||| || || |||| ||||  |  ||||||||| | ||| ||||||||||||    
T  97562 ttggggttggcctagtggttggcttgggatcttgtagtttgctcctccaaaggtctcaggttcgattccctctggtgccaatttcggtgg 97473  T

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Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 297 - 430
Target Start/End: Complemental strand, 53010 - 52871
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggatt-gt 393  Q
    ||||||||||||| ||| ||||||||||  ||||| ||  ||||||||||| ||||||||||||||||||| | || |||| ||| ||||| ||||| ||    
T  53010 aggttcgattccctctggtgccaatttcggtgggcaaaatccatacagagc-ttgctctggctttaaacggggcccccgcaggtgggcggtaggattggt 52912  T
Q  394 ccccttgga----tcgattcttgaatcagataccgagtttt 430  Q
    || || |||    |||||||||||||| |||||||||||||    
T  52911 cctctcggattagtcgattcttgaatcggataccgagtttt 52871  T

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Target: scaffold0157 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 297 - 366
Target Start/End: Original strand, 20280 - 20349
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 366  Q
    ||||| ||||||| ||| ||||||||||||||||| ||| ||||||| ||| |||||||||||||||||||    
T  20280 aggtttgattccctctggtgccaatttcaatgggctaagtccatacatagc-ttgctctggctttaaacgg 20349  T

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Target: scaffold0068 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 202 - 242
Target Start/End: Complemental strand, 41840 - 41800
Alignment:
Q  202 ttggggttggcgtagtggttgacttgagatcttggagtttg 242  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  41840 ttggggttggcctagtggttgacttgggatcttggagtttg 41800  T

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Target: scaffold0209 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 30219 - 30270
Alignment:
Q  312 tgatgccaatttcaatgggcaaggccatacagagctttgctctggctttaaa 363  Q
    ||||| |||||||||||| |||| ||||| ||||||||||||||||| ||||    
T  30219 tgatgtcaatttcaatggacaagtccatatagagctttgctctggctataaa 30270  T

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Target: scaffold0717 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 297 - 366
Target Start/End: Complemental strand, 97 - 28
Alignment:
Q  297 aggttcgattccccctgatgccaatttcaatgggc-aaggccatacagagctttgctctggctttaaacgg 366  Q
    ||||||||||||| || ||| ||||||| |||||| ||| |||||||||| |||||||| |||||||||||    
T  97 aggttcgattccctcttatgtcaatttcgatgggctaagtccatacagag-tttgctctagctttaaacgg 28  T

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Target: scaffold1175 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold1175
Description:

Target: scaffold1175; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 336 - 392
Target Start/End: Complemental strand, 2525 - 2469
Alignment:
Q  336 ccatacagagctttgctctggctttaaacggag-cctcgcaagtgagcggtgggattg 392  Q
    ||||||||||||| ||||||||||||||||| | || |||||||| ||||||||||||    
T  2525 ccatacagagctt-gctctggctttaaacggggcccccgcaagtgggcggtgggattg 2469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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