View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20594_low_22 (Length: 383)
Name: NF20594_low_22
Description: NF20594
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20594_low_22 |
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Alignment Details
Target: chr4 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 87 - 369
Target Start/End: Original strand, 4394968 - 4395250
Alignment:
| Q |
87 |
acattgaatatacgtatttttataaaatcgtacaatgtaggatctttaaacagtgtcaagagacattcgtgaacattttctaaactattattgcctaaaa |
186 |
Q |
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| T |
4394968 |
acattgaatacacgtatttttataaaaacgtacaatataggatctttaaatagtgtctagagacattcgttaacattttctaaactattattgcctaaaa |
4395067 |
T |
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| Q |
187 |
aaccattgaaaactattaagttgctcaatttttgtccacatccatcggtgaacgaattttataacaaattgaatgtgaccaacacataaaaacacatttg |
286 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4395068 |
aaccattgaaaactattaagttgctcaatttttgtcctcatccatcggtgaacgaattttataacaaattgaatgtgaccaacacataaaaacacatttg |
4395167 |
T |
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| Q |
287 |
gccttatgtcaagtataccttgaataaacttggggtaggacatgaaaaacgaaatactattggtcctaacttgttgttctctg |
369 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4395168 |
gccttatgtcaagtataccttgaataaacttggggtaggacatgaaaaacgaaatactattggtcctaacttgttgttctctg |
4395250 |
T |
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