View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20596_low_24 (Length: 298)
Name: NF20596_low_24
Description: NF20596
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20596_low_24 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 11 - 279
Target Start/End: Original strand, 11913510 - 11913779
Alignment:
| Q |
11 |
cacagacatcaaaattcaaataaaacaatcattctgcaaaacatgttacatagacaaaagggtttaaaagggtaaaagaaccaaaattttaagattgaaa |
110 |
Q |
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| T |
11913510 |
cacaaacatcaaaattcaaataaaacaatcattctgcaaaacatgttacatagacaaaagggtttaaaagggtaaaagaaccaaaattttcagattgaaa |
11913609 |
T |
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| Q |
111 |
accctaatcctaatgccacatnnnnnnnnnccacaattcaatcctaataggttaaaaaacttgaagaaaa-aaccataatggcctatcaatcaaaatata |
209 |
Q |
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| T |
11913610 |
accctaattctaatgccacataaaaaaaaccaacaattcaatcctaataggttaaaaaacttgaagaaaaaaaccataatggcctatcaatcaaaatata |
11913709 |
T |
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| Q |
210 |
aacccatcaatcatctctaaattcaaaacagaaatagaaaaataaccaaacatcaattcacagagataaa |
279 |
Q |
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|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
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| T |
11913710 |
aacccatcaatcatctctaaattcaaaatagaaatagaaaaataaccaaacatcaattcacagagataaa |
11913779 |
T |
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