View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20598_low_32 (Length: 250)
Name: NF20598_low_32
Description: NF20598
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20598_low_32 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 7416060 - 7415826
Alignment:
| Q |
1 |
ttattcaatatattgtattcgtggggctaactaaattaacttgctcttatcttgccacatttgttacccttatgtctgtatattttttatttactaatta |
100 |
Q |
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| T |
7416060 |
ttattcaatatattgtattcgtggggctaactaaattaacttgctcttatcttgccacatttgttacccttatgtctgtatattttttatttactaatta |
7415961 |
T |
|
| Q |
101 |
tacaagtcgtgccaagtttaacctaattaagtatgttttgttgtgctagctcaatgaatccatcgatttaagagatacacaaattagttttagaagacag |
200 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7415960 |
tacaagtggtgccaagtttaacctaattaagtatgttttgttgtgctagctcaatgaatccatcgatttaagagatacacaaattagttttagaagacag |
7415861 |
T |
|
| Q |
201 |
acgaaaattactggcatatacaactctaaattttg |
235 |
Q |
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|||||||||||| |||||||||||||||||||||| |
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| T |
7415860 |
acgaaaattactagcatatacaactctaaattttg |
7415826 |
T |
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