View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2059_low_11 (Length: 257)
Name: NF2059_low_11
Description: NF2059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2059_low_11 |
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Alignment Details
Target: chr3 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 16 - 245
Target Start/End: Complemental strand, 4260193 - 4259964
Alignment:
| Q |
16 |
atgataaataagatttaactgatattcctactggtttactgagttatataaagcttcaatctttgcctttgatgaccttcattcatgcatgtttattttg |
115 |
Q |
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| T |
4260193 |
atgataaataagatttaactgatattcctactggtttactgagttatataaagcttcaatctttgcctttgatgaccttcattcatgcatgtttattttg |
4260094 |
T |
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| Q |
116 |
tgtgtaaattatacagatgtttatctttggaccaatgctatgtcaaaaatgaaagttagagtgtgtttgttttttcccatggagacatggccacggttag |
215 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4260093 |
tgtgtaaattgtacagatgtttatctttggaccaatgctatgtcaaaaatgaaagttagagtgtgtttgttttttcccatggagacatggccacggttag |
4259994 |
T |
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| Q |
216 |
cggtatgaagaactgctttttgagttgttc |
245 |
Q |
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|||||||||||||||||||||||||||||| |
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| T |
4259993 |
cggtatgaagaactgctttttgagttgttc |
4259964 |
T |
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