View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20603_low_2 (Length: 487)
Name: NF20603_low_2
Description: NF20603
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20603_low_2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 467; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 467; E-Value: 0
Query Start/End: Original strand, 1 - 487
Target Start/End: Original strand, 48451147 - 48451633
Alignment:
| Q |
1 |
acgtacttgttcatagaggaatttatgaagctgcaaaaggaatatatgaacaattcatgccggaaataatggaccatttgaaaagacatggggatcgcgc |
100 |
Q |
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| T |
48451147 |
acgtacttgttcatagaggaatttatgaagctgcaaaaggaatatatgaacaattcatgccagaaataatggaccatttgaaaagacatggggatcgcgc |
48451246 |
T |
|
| Q |
101 |
gaagcttcaattcactggacattcccttggcggcagtctctctcttttggttcatttgatgctattgactaggaaagttgtcagtccctcaactcttaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
48451247 |
gaagcttcaattcactggacattcccttggcggcagtctctctcttttggttcatttgatgctattgactaggaaagttgtcagcccctcaactcttaaa |
48451346 |
T |
|
| Q |
201 |
ccagtagtgacttttggttcaccatttgtattctgcggaggccaaaaattaatcgatgaactaggcgtggatgaaagccaaatccactgtgtaatgatgc |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
48451347 |
ccagtagtgacttttggttcaccatttgtattctgcggaggccaaaaattaatcgatgaactaggcgtggatgaaaaccaaatccactgtgtaatgatgc |
48451446 |
T |
|
| Q |
301 |
atagagatattgttcccagggccttctcctgtaattatcctgaccatgtagctgttatccttaagcgtttaaaccgcacttttcggtcacatccttgctt |
400 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48451447 |
atagagatattgttcccagggccttctcctgtaattatcctgaccatgtagctgttatccttaagcgtttaaaccgcacttttcggtcacatccttgctt |
48451546 |
T |
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| Q |
401 |
gacaaaaaatgtaagcatgtttgtgtgttctattattatattcatgacttaattcgtactgtacactcagattgaaattatgtttga |
487 |
Q |
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|||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48451547 |
gacaaaaaatgtaagcatatttgtttgttctattattatattcatgacttaattcgtactgtacactcagattgaaattatgtttga |
48451633 |
T |
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