View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20606_low_7 (Length: 260)
Name: NF20606_low_7
Description: NF20606
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20606_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 15 - 240
Target Start/End: Complemental strand, 45339617 - 45339392
Alignment:
| Q |
15 |
tattatttccagaagtggttttagagtaaattaattttagttaaaagtggggtgatttatgtttagataaattcacctaaacgtaatatgaaccatattt |
114 |
Q |
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| T |
45339617 |
tattatttccagaagtggttttagagtaaattaattttagttaaaagtggggtgatttatgtttagataaattcacctaaacgtaatatgaaccatattt |
45339518 |
T |
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| Q |
115 |
gagtataaaaatcaccttcacccttttgaacattttcggtggtttccatttaccgtttgagttgtagtcgaagacctgaagatgattccaaagattgcac |
214 |
Q |
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| T |
45339517 |
gagtataaaaatcaccttcacccttttgaacattttcggtggtttccatttaccgtttgagttgtagtcgaagacctgaagatgattccaaagattgcac |
45339418 |
T |
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| Q |
215 |
cacctatgggagacaagactcatcat |
240 |
Q |
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| T |
45339417 |
cacctatgggagacaagactcatcat |
45339392 |
T |
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