View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20607_low_2 (Length: 487)

Name: NF20607_low_2
Description: NF20607
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20607_low_2
NF20607_low_2
[»] chr4 (16 HSPs)
chr4 (1-471)||(3565536-3566006)
chr4 (8-470)||(3557519-3557981)
chr4 (1-436)||(1686099-1686528)
chr4 (84-422)||(3560858-3561187)
chr4 (191-293)||(53774810-53774912)
chr4 (182-263)||(11970971-11971052)
chr4 (182-263)||(11981672-11981753)
chr4 (181-294)||(19359106-19359219)
chr4 (191-306)||(8443452-8443567)
chr4 (194-255)||(53430100-53430161)
chr4 (182-263)||(53790553-53790634)
chr4 (190-270)||(837769-837849)
chr4 (198-263)||(35767018-35767083)
chr4 (193-269)||(6372439-6372515)
chr4 (194-255)||(6392832-6392893)
chr4 (190-246)||(829594-829650)
[»] chr1 (10 HSPs)
chr1 (1-414)||(39378878-39379282)
chr1 (183-426)||(21855373-21855616)
chr1 (194-425)||(4366496-4366727)
chr1 (182-321)||(17560762-17560901)
chr1 (183-311)||(4570879-4571007)
chr1 (194-321)||(10218927-10219054)
chr1 (183-257)||(4014955-4015029)
chr1 (183-322)||(4016762-4016901)
chr1 (193-263)||(50645485-50645555)
chr1 (91-137)||(50645401-50645447)
[»] chr3 (3 HSPs)
chr3 (8-422)||(3625575-3625989)
chr3 (191-263)||(25901277-25901349)
chr3 (191-263)||(25915295-25915367)
[»] chr7 (61 HSPs)
chr7 (182-428)||(29867074-29867317)
chr7 (194-428)||(29881091-29881325)
chr7 (182-428)||(29859289-29859535)
chr7 (182-417)||(29454092-29454327)
chr7 (191-425)||(29921991-29922219)
chr7 (168-417)||(29476315-29476564)
chr7 (182-312)||(29874461-29874592)
chr7 (195-407)||(29899224-29899442)
chr7 (200-322)||(29445663-29445785)
chr7 (182-262)||(660836-660916)
chr7 (182-257)||(14076684-14076759)
chr7 (182-257)||(14386712-14386787)
chr7 (192-294)||(13416910-13417012)
chr7 (194-429)||(29106642-29106883)
chr7 (194-310)||(19604464-19604580)
chr7 (241-407)||(29885104-29885270)
chr7 (193-310)||(1985955-1986072)
chr7 (195-263)||(19344577-19344645)
chr7 (216-273)||(9807814-9807871)
chr7 (182-297)||(29430990-29431102)
chr7 (182-246)||(6864796-6864860)
chr7 (197-264)||(19597659-19597726)
chr7 (191-294)||(36260222-36260325)
chr7 (211-306)||(36263010-36263105)
chr7 (194-263)||(18952906-18952975)
chr7 (194-263)||(18982953-18983022)
chr7 (194-263)||(18997599-18997668)
chr7 (182-263)||(19351058-19351139)
chr7 (191-263)||(22100493-22100565)
chr7 (200-311)||(22021344-22021455)
chr7 (193-291)||(18514787-18514885)
chr7 (193-255)||(19645630-19645692)
chr7 (182-256)||(24385208-24385282)
chr7 (204-417)||(29895312-29895528)
chr7 (182-255)||(20352103-20352176)
chr7 (182-254)||(19357919-19357991)
chr7 (191-263)||(22063642-22063714)
chr7 (191-263)||(22080868-22080940)
chr7 (182-254)||(24010392-24010464)
chr7 (193-264)||(19637217-19637288)
chr7 (181-263)||(12819904-12819986)
chr7 (195-241)||(19374778-19374824)
chr7 (193-263)||(20058057-20058127)
chr7 (202-268)||(20414877-20414943)
chr7 (195-269)||(22028622-22028696)
chr7 (213-263)||(22070111-22070161)
chr7 (236-321)||(29920086-29920171)
chr7 (182-254)||(24002208-24002280)
chr7 (182-254)||(26217976-26218048)
chr7 (42-126)||(29874648-29874732)
chr7 (194-258)||(46769376-46769440)
chr7 (209-308)||(16839397-16839496)
chr7 (184-258)||(20410672-20410746)
chr7 (209-268)||(22534620-22534679)
chr7 (209-264)||(26256774-26256829)
chr7 (209-254)||(15443973-15444018)
chr7 (193-294)||(15571895-15571996)
chr7 (38-71)||(19358123-19358156)
chr7 (182-255)||(20374492-20374565)
chr7 (195-263)||(19722018-19722086)
chr7 (194-254)||(23993544-23993604)
[»] chr5 (7 HSPs)
chr5 (183-426)||(24330889-24331132)
chr5 (182-263)||(18964819-18964900)
chr5 (195-263)||(29597554-29597622)
chr5 (195-274)||(29647665-29647744)
chr5 (212-257)||(23086788-23086833)
chr5 (38-69)||(18964672-18964703)
chr5 (195-274)||(29642348-29642427)
[»] chr6 (9 HSPs)
chr6 (193-306)||(6921350-6921463)
chr6 (182-252)||(17369675-17369745)
chr6 (193-310)||(6947880-6947997)
chr6 (182-263)||(20770650-20770731)
chr6 (193-306)||(6935218-6935331)
chr6 (195-270)||(6954521-6954596)
chr6 (197-289)||(6942971-6943063)
chr6 (197-247)||(14749413-14749463)
chr6 (212-273)||(5979017-5979078)
[»] chr2 (11 HSPs)
chr2 (193-310)||(14514853-14514970)
chr2 (182-269)||(18908798-18908885)
chr2 (182-269)||(18920754-18920841)
chr2 (182-268)||(18913546-18913632)
chr2 (193-260)||(554479-554546)
chr2 (192-263)||(25377074-25377145)
chr2 (203-263)||(21021279-21021339)
chr2 (211-323)||(10205462-10205574)
chr2 (42-71)||(18913379-18913408)
chr2 (181-257)||(2576888-2576964)
chr2 (194-258)||(2596012-2596076)
[»] scaffold0242 (2 HSPs)
scaffold0242 (182-322)||(13719-13859)
scaffold0242 (182-322)||(22554-22694)
[»] scaffold0867 (1 HSPs)
scaffold0867 (191-263)||(4667-4739)
[»] scaffold0649 (1 HSPs)
scaffold0649 (191-297)||(5404-5510)
[»] scaffold0354 (1 HSPs)
scaffold0354 (192-255)||(7471-7534)
[»] chr8 (3 HSPs)
chr8 (194-268)||(29157043-29157117)
chr8 (191-257)||(29390292-29390358)
chr8 (182-231)||(27618523-27618572)


Alignment Details
Target: chr4 (Bit Score: 467; Significance: 0; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 467; E-Value: 0
Query Start/End: Original strand, 1 - 471
Target Start/End: Complemental strand, 3566006 - 3565536
Alignment:
Q  1 aatacttgttttatgcacagtgactcttgttcgttccactctattatctctccaattatagagaattgcatccctctcaagactactacgcaataccagt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3566006 aatacttgttttatgcacagtgactcttgttcgttccactctattatctctccaattatagagaattgcatccctctcaagactactacgcaataccagt 3565907  T
Q  101 gtatcaccatccttagaaagaaacaatggcaagaatcgaagatgatacttcagcgtatcatccctaaagtcatggttcaactgaagatcatgataactaa 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3565906 gtatcaccatccttagaaagaaacaatggcaagaatcgaagatgatacttcagcgtatcatccctaaagtcatggttcaactgaagatcatgataactaa 3565807  T
Q  201 ttttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaaggcagtc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3565806 ttttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaaggcagtc 3565707  T
Q  301 cctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagtccctaaatcaagtgaaaca 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3565706 cctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagtccctaaatcaagtgaaaca 3565607  T
Q  401 ataacaatctgctcaacagtaatatcctccaccgccggatcaccaaaccaagtgatcgggatgtcattgtg 471  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3565606 ataacaatctgctcaacagtaatatcctccaccgccggatcaccaaaccaagtgatcgggatgtcgttgtg 3565536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 8 - 470
Target Start/End: Complemental strand, 3557981 - 3557519
Alignment:
Q  8 gttttatgcacagtgactcttgttcgttccactctattatctctccaattatagagaattgcatccctctcaagactactacgcaataccagtgtatcac 107  Q
    |||||||||| |||||||| |||||| |||||||||| ||| |||||||||||||||||||| ||||| ||  ||||||||  |||||||||||||||||    
T  3557981 gttttatgcagagtgactcctgttcgctccactctatgatccctccaattatagagaattgcttccctttcttgactactagacaataccagtgtatcac 3557882  T
Q  108 catccttagaaagaaacaatggcaagaatcgaagatgatacttcagcgtatcatccctaaagtcatggttcaactgaagatcatgataactaattttaag 207  Q
    |||||||||||||||||| |||||||||| |||||||||||||||||||| || | |||||||||| |||||||||||||||||||||||||||||||||    
T  3557881 catccttagaaagaaacactggcaagaattgaagatgatacttcagcgtaacagcactaaagtcatagttcaactgaagatcatgataactaattttaag 3557782  T
Q  208 aaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaaggcagtccctcaac 307  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| ||| |||||||||||||||| ||||||||||||    
T  3557781 aaattgagtccaagactcttcaaccccaaattccttcatatgccatataataaaatcggtttccttgtaagaataagaaaaacaaagacagtccctcaac 3557682  T
Q  308 acaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagtccctaaatcaagtgaaacaataacaa 407  Q
    |||||||| ||||||||||||||||| | ||||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  3557681 acaccaacggttggctcctcagtcggcatctcatcaaaaccccgaggcaaccgatattggttgtatgactcagtccccaaatcaagtgaaacaataacaa 3557582  T
Q  408 tctgctcaacagtaatatcctccaccgccggatcaccaa-accaagtgatcgggatgtcattgt 470  Q
    ||||||| ||||||||||||||||   | |||  ||||| ||||||||||||||||||||||||    
T  3557581 tctgctcgacagtaatatcctccagatcagga-aaccaataccaagtgatcgggatgtcattgt 3557519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 1 - 436
Target Start/End: Original strand, 1686099 - 1686528
Alignment:
Q  1 aatacttgttttatgcacagtgactcttgttcgttccactctattatctctccaattatagagaattgcatccctctcaagactactacgcaataccagt 100  Q
    |||||| |||||||||||| | | ||||||||| |||||||||  ||| ||||||||||||| |||||| ||| | || | | ||||   |||||  | |    
T  1686099 aatactagttttatgcacaataattcttgttcgctccactctacaatccctccaattatagataattgcttccgtttccaaattactcttcaatatgact 1686198  T
Q  101 gtatcaccatccttagaaagaaacaatggcaagaatcgaagatgatacttcagcgtatcatccctaaagtcatggttcaactgaagatcatgataactaa 200  Q
    ||||||||||||||||||||||||||||||| ||| || ||||    |||  |  ||      ||||||||||  || || |||||||||| |||||||     
T  1686199 gtatcaccatccttagaaagaaacaatggcatgaaacgtagattgctcttaggacta------ctaaagtcattttttaattgaagatcataataactat 1686292  T
Q  201 ttttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaaggcagtc 300  Q
     |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || |||  |||||||| ||||||||||||||||||||||    
T  1686293 atttaagaaattgagtccaagactcgtcaacgccaaattccttcatctgccatataataagattggtcctcttataagaataagaaaaacaaaggcagtc 1686392  T
Q  301 cctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagtccctaaatcaagtgaaaca 400  Q
    || |||||||||||||||||||||   |  ||| |||||| |||||||| |||||||||||||||| ||||||| ||||||||| |||| ||||||||||    
T  1686393 ccccaacacaccaacagttggctctataagcggcacctcagcaaaaccctgaggcaaccgatattgattgtatgtctcagtccccaaattaagtgaaaca 1686492  T
Q  401 ataacaatctgctcaacagtaatatcctccaccgcc 436  Q
    ||||||||||| |||||||||||||||| |||||||    
T  1686493 ataacaatctgttcaacagtaatatccttcaccgcc 1686528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 84 - 422
Target Start/End: Original strand, 3560858 - 3561187
Alignment:
Q  84 tactacgcaataccagtgtatcaccatccttagaaagaaacaatggcaagaatcgaagatgatacttcagcgtatcatccctaaagtcatggttcaactg 183  Q
    ||||| |||||| ||||||||||||||| | |||||||| ||||||||||||| ||   |||||| |||       ||  ||||||||||  |  || ||    
T  3560858 tactatgcaatatcagtgtatcaccatcttcagaaagaagcaatggcaagaattga---tgatacctcaa------ataactaaagtcataatctaattg 3560948  T
Q  184 aagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataa 283  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||||||||||| ||| ||| |||||    
T  3560949 aagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattttttcatctgccaaataataaaatcggtttccttgtaagaataa 3561048  T
Q  284 gaaaaacaaaggcagtccctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagtcc 383  Q
    |||||||||||||| |||| ||| ||||||| | | |||||  ||| ||| |||| |||||||||| ||||||||  |||||| ||||||| |||||| |    
T  3561049 gaaaaacaaaggcaatcccccaagacaccaagattaggctctgcaggcggtaccttatcaaaaccccgaggcaacaaatattgattgtatgtctcagttc 3561148  T
Q  384 ctaaatcaagtgaaacaataacaatctgctcaacagtaa 422  Q
    | | |||||| ||||||||||||| ||||||||| ||||    
T  3561149 ccagatcaagcgaaacaataacaaactgctcaactgtaa 3561187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 191 - 293
Target Start/End: Complemental strand, 53774912 - 53774810
Alignment:
Q  191 tgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaac 290  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||||||||| |||||  ||||  ||| ||  |||||||||||    
T  53774912 tgataactaattttaaggaattgagtccaagactcttcaactccaaattccttcatttgccatataacaaaatgagtttctttaaaatcataagaaaaac 53774813  T
Q  291 aaa 293  Q
    |||    
T  53774812 aaa 53774810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 11970971 - 11971052
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||| || |||||||||||||| |||||||||| |||||    
T  11970971 tgaagattatgataactaattctaagaaattgagtccaagactcttccactccaaattccttcatttgccatataacaaaat 11971052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 11981672 - 11981753
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    ||||||| | |||||||||||||||||||| ||||||| |||||||| || |||||||||||||| |||||||||| |||||    
T  11981672 tgaagattaagataactaattttaagaaatcgagtccaggactcttccactccaaattccttcatttgccatataacaaaat 11981753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 181 - 294
Target Start/End: Complemental strand, 19359219 - 19359106
Alignment:
Q  181 ctgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaa 280  Q
    ||||||||  ||||| |||||||||| || ||||||||||||||||||||| |||||||| | |||||   |||||  |||||| |||||||||||| ||    
T  19359219 ctgaagattttgatacctaattttaataagttgagtccaagactcttcaactccaaattcttccatcttaaatatatcaaaatcagttttcttataataa 19359120  T
Q  281 taagaaaaacaaag 294  Q
    | |||||| |||||    
T  19359119 ttagaaaagcaaag 19359106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 306
Target Start/End: Original strand, 8443452 - 8443567
Alignment:
Q  191 tgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaac 290  Q
    ||||||||||||||||  |||||| |||||||||| | ||| ||||| |||||||||||||| |||| | |||  ||| ||||  ||  |||||||||||    
T  8443452 tgataactaattttaaataattgaatccaagactcgtgaactccaaaatccttcatctgccaaataacataatgagttctcttgaaatcataagaaaaac 8443551  T
Q  291 aaaggcagtccctcaa 306  Q
    |||| |||||| ||||    
T  8443552 aaagacagtccatcaa 8443567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 194 - 255
Target Start/End: Original strand, 53430100 - 53430161
Alignment:
Q  194 taactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatat 255  Q
    |||||||||||||| |||||||||||||| |||||  ||||| ||| |||||||||||||||    
T  53430100 taactaattttaaggaattgagtccaagaatcttcggccccatatttcttcatctgccatat 53430161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 53790634 - 53790553
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||||||  ||| |||||||||||||||||||||||||||| | |||||  |||||||   |||||| ||||||||||||||    
T  53790634 tgaagattctgaaaactaattttaagaaattgagtccaagattgttcaaatccaaattttgtcatcttccatataataaaat 53790553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 190 - 270
Target Start/End: Complemental strand, 837849 - 837769
Alignment:
Q  190 atgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggtttt 270  Q
    |||||| ||||||||||  |||||| |||||||||||| ||| ||||| | |||||| |||||||||| ||||| ||||||    
T  837849 atgatagctaattttaaataattgaatccaagactcttgaacaccaaaattcttcatttgccatataacaaaatgggtttt 837769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 198 - 263
Target Start/End: Complemental strand, 35767083 - 35767018
Alignment:
Q  198 taattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||||||||| | |||| |||||||||||||||| |||||||| | ||||| |||||||| |||||    
T  35767083 taattttaaggagttgaatccaagactcttcaactccaaattcttccatcttccatataacaaaat 35767018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 193 - 269
Target Start/End: Complemental strand, 6372515 - 6372439
Alignment:
Q  193 ataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttt 269  Q
    |||||||||||||   |||||| || ||||||||| ||| ||| | |||||||| |||||||||||||||| |||||    
T  6372515 ataactaattttatataattgaatctaagactcttgaactccagaatccttcatttgccatataataaaatgggttt 6372439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 194 - 255
Target Start/End: Complemental strand, 6392893 - 6392832
Alignment:
Q  194 taactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatat 255  Q
    |||||||||||||  |||||| |||||||||| | ||| ||||| |||||||| ||||||||    
T  6392893 taactaattttaaataattgaatccaagactcgtgaactccaaaatccttcatttgccatat 6392832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 190 - 246
Target Start/End: Original strand, 829594 - 829650
Alignment:
Q  190 atgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcat 246  Q
    |||||||||||||||||  ||||||  ||||||||||| ||| ||||| ||||||||    
T  829594 atgataactaattttaaataattgaacccaagactcttgaacaccaaaatccttcat 829650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 160; Significance: 5e-85; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 1 - 414
Target Start/End: Original strand, 39378878 - 39379282
Alignment:
Q  1 aatacttgttttatgcacagtgactcttgttcgttccactctattatctctccaattatagagaattgcatccctctcaagactactacgcaataccagt 100  Q
    |||||| ||||||||||| || |||| |||||| |||||||||| ||| ||||||||||||| |||||  ||||| ||   |  ||||||| |   || |    
T  39378878 aatactagttttatgcacggtaactcctgttcgctccactctatgatccctccaattatagataattgattccctttcttcaaaactacgcga---caat 39378974  T
Q  101 gtatcaccatccttagaaagaaacaatggcaagaatcgaagatgatacttcagcgtatcatccctaaagtcatggttcaactgaagatcatgataactaa 200  Q
    ||||||||||| || |||||||||||||||     || ||||   | || ||||||| |   || | |||||| |||||| ||||||||||||||||| |    
T  39378975 gtatcaccatcattcgaaagaaacaatggc-----tc-aagaattttctgcagcgtaccgaacccagagtcatagttcaattgaagatcatgataactga 39379068  T
Q  201 ttttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaaggcagtc 300  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  | |||||||||||||||||||| |||||    
T  39379069 ttttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcagtttttctgtaacaataagaaaaacaaagacagtc 39379168  T
Q  301 cctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagtccctaaatcaagtgaaaca 400  Q
     | ||||||||||| | |||||||  ||| |||||||||||||||||||  |||||||||||| || |||||||  |||||||| |||||||||||||||    
T  39379169 acccaacacaccaaaacttggctctgcagacggaacctcatcaaaaccccaaggcaaccgatactggttgtatgtttcagtccccaaatcaagtgaaaca 39379268  T
Q  401 ataacaatctgctc 414  Q
    ||||||||||||||    
T  39379269 ataacaatctgctc 39379282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 183 - 426
Target Start/End: Original strand, 21855373 - 21855616
Alignment:
Q  183 gaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaata 282  Q
    |||||| ||| ||||||| |||||| | |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||| ||  ||||    
T  21855373 gaagattatggtaactaactttaaggagttgagtccaagaatcttcaaccccaaattccttcatctcccatataacaaaatcggtttccttgtacgaata 21855472  T
Q  283 agaaaaacaaaggcagtccctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagtc 382  Q
     ||||||||||| ||| ||||||| ||||||| ||||||||| |  | |||||| |||||||||||  ||||||     ||||| ||||||| ||| |||    
T  21855473 tgaaaaacaaagacagcccctcaatacaccaatagttggctctttcggcggaacttcatcaaaaccatgaggcataatgtattgattgtatgtctccgtc 21855572  T
Q  383 cctaaatcaagtgaaacaataacaatctgctcaacagtaatatc 426  Q
     | |||||||| |||||||| |||| ||| ||||||||||||||    
T  21855573 tccaaatcaagagaaacaatcacaaactggtcaacagtaatatc 21855616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 194 - 425
Target Start/End: Original strand, 4366496 - 4366727
Alignment:
Q  194 taactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaa 293  Q
    ||||||| |||||||||| |||||||||||||||||||||| |||| |||||||||||||| || |||||| |||||||| ||| |||||||||||||||    
T  4366496 taactaactttaagaaatggagtccaagactcttcaaccccgaatttcttcatctgccataaaacaaaatcagttttcttgtaagaataagaaaaacaaa 4366595  T
Q  294 ggcagtccctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagtccctaaatcaag 393  Q
    ||||||||| |||||||||||| ||||| ||   ||  || || || ||||||||  |||||| |   ||||| ||||||| ||| || || | ||||||    
T  4366596 ggcagtcccccaacacaccaactgttggttcagtaggtggcacttcttcaaaaccacgaggcagcaagtattgattgtatgtctctgtacccagatcaag 4366695  T
Q  394 tgaaacaataacaatctgctcaacagtaatat 425  Q
     |||||||||||||  |||||||| |||||||    
T  4366696 cgaaacaataacaaattgctcaacggtaatat 4366727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 321
Target Start/End: Original strand, 17560762 - 17560901
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaat 281  Q
    |||||||| | |||||||||| |||| ||| | |||||||| |||||||||||||||| |||||| ||||||||||  |||||| ||| ||| |||||||    
T  17560762 tgaagatcgttataactaattataaggaatggtgtccaagaatcttcaaccccaaatttcttcatgtgccatataaccaaatcgatttccttgtaacaat 17560861  T
Q  282 aagaaaaacaaaggcagtccctcaacacaccaacagttgg 321  Q
    ||||||||||||| ||||||| ||||||||||| ||||||    
T  17560862 aagaaaaacaaagacagtcccccaacacaccaaaagttgg 17560901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 183 - 311
Target Start/End: Complemental strand, 4571007 - 4570879
Alignment:
Q  183 gaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaata 282  Q
    ||||||||  ||||||||||||||| |||||||||||||| |||||||||||||||| |||||| |||||||||| |||||| |||| | | |   ||||    
T  4571007 gaagatcactataactaattttaagcaattgagtccaagaatcttcaaccccaaatttcttcatttgccatataacaaaatcagtttccctgtgtgaata 4570908  T
Q  283 agaaaaacaaaggcagtccctcaacacac 311  Q
    |||||||||||||||| | | ||||||||    
T  4570907 agaaaaacaaaggcagcctcccaacacac 4570879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 194 - 321
Target Start/End: Complemental strand, 10219054 - 10218927
Alignment:
Q  194 taactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaa 293  Q
    |||||||||||||| |||||||||||||| ||||||| |||||||| |||||| ||||||| || |||||| |||| ||| |   || ||||||||||||    
T  10219054 taactaattttaagtaattgagtccaagaatcttcaatcccaaatttcttcatttgccatacaacaaaatcagtttccttgtgcaaaaaagaaaaacaaa 10218955  T
Q  294 ggcagtccctcaacacaccaacagttgg 321  Q
    ||||  ||| ||||||||||| ||||||    
T  10218954 ggcaaccccccaacacaccaatagttgg 10218927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 183 - 257
Target Start/End: Original strand, 4014955 - 4015029
Alignment:
Q  183 gaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataa 257  Q
    |||||||||| ||||||| |||||| |||||||||||||| |||||||||||||||| |||||||||||||||||    
T  4014955 gaagatcatggtaactaactttaaggaattgagtccaagaatcttcaaccccaaatttcttcatctgccatataa 4015029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 183 - 322
Target Start/End: Original strand, 4016762 - 4016901
Alignment:
Q  183 gaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaata 282  Q
    |||||||||| ||||||| |||||  || |||||||| || |||||||| ||||||| |||||||||||| |||   |||| ||||| | ||||  ||||    
T  4016762 gaagatcatggtaactaaatttaaacaactgagtccaggaatcttcaactccaaatttcttcatctgccagatacagaaattggtttgcctataggaata 4016861  T
Q  283 agaaaaacaaaggcagtccctcaacacaccaacagttggc 322  Q
    |||||||||||||||| ||| |||||||| || |||||||    
T  4016862 agaaaaacaaaggcagccccccaacacactaatagttggc 4016901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 263
Target Start/End: Original strand, 50645485 - 50645555
Alignment:
Q  193 ataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    ||||||||||||||  |||||| |||||||||||| ||| ||||| |||||||| ||||| |||| |||||    
T  50645485 ataactaattttaaataattgaatccaagactcttgaactccaaaatccttcatttgccacataacaaaat 50645555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 137
Target Start/End: Original strand, 50645401 - 50645447
Alignment:
Q  91 caataccagtgtatcaccatccttagaaagaaacaatggcaagaatc 137  Q
    |||||||||||||||||||| |||||| ||| |||||||||| ||||    
T  50645401 caataccagtgtatcaccattcttagagagatacaatggcaacaatc 50645447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 143; Significance: 6e-75; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 8 - 422
Target Start/End: Complemental strand, 3625989 - 3625575
Alignment:
Q  8 gttttatgcacagtgactcttgttcgttccactctattatctctccaattatagagaattgcatccctctcaagactactacgcaataccagtgtatcac 107  Q
    ||||||||||| || |||| ||||||  |||||||||||||| |||||||||| | |||||| ||||| ||   | ||||  | |||| || |||||| |    
T  3625989 gttttatgcaccgtaactcctgttcgcaccactctattatctttccaattatacaaaattgcttccctttctttattactctgtaatatcaatgtatctc 3625890  T
Q  108 catccttagaaagaaacaatggcaagaatcgaagatgatacttcagcgtatcatccctaaagtcatggttcaactgaagatcatgataactaattttaag 207  Q
    | |||| | |||||| ||| || | ||||||||||||||||||||||||||     ||||||||||  |  || |||||||  |||||||||||||||||    
T  3625889 cttcctcataaagaagcaagggtatgaatcgaagatgatacttcagcgtattccaactaaagtcataatctaattgaagattttgataactaattttaag 3625790  T
Q  208 aaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaaggcagtccctcaac 307  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||| || ||||  ||| ||| |||||||||||||||||||||||| ||||    
T  3625789 aaattgagtccaagactcttcaaccccaaatttcttcatttgccatataataagataggttaccttgtaagaataagaaaaacaaaggcagtcccccaac 3625690  T
Q  308 acaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagtccctaaatcaagtgaaacaataacaa 407  Q
    ||||||||| |||| ||   ||  || |||| |||||| ||  |||||| || ||| || ||||||| ||||||||| ||||||||||||||||||||||    
T  3625689 acaccaacatttggttctataggaggcaccttatcaaatccacgaggcagccaatagtgattgtatgtctcagtccccaaatcaagtgaaacaataacaa 3625590  T
Q  408 tctgctcaacagtaa 422  Q
      |||||||||||||    
T  3625589 attgctcaacagtaa 3625575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 263
Target Start/End: Original strand, 25901277 - 25901349
Alignment:
Q  191 tgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||||||||||||| |  |||||| |||||||||||| ||| | ||| |||||||| | |||||||| |||||    
T  25901277 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaat 25901349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 191 - 263
Target Start/End: Original strand, 25915295 - 25915367
Alignment:
Q  191 tgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||||||||||||| |  |||||| |||||||||||| ||| | ||| |||||||| | |||||||| |||||    
T  25915295 tgataactaatttttaacaattgaatccaagactcttgaactcgaaaatccttcattttccatataacaaaat 25915367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 3e-52; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 182 - 428
Target Start/End: Complemental strand, 29867317 - 29867074
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaat 281  Q
    ||||||| ||| ||||||||| |||| |||||||||||||| ||||||||||| |||| |||||| ||||||||||||||||| |||| |||   | |||    
T  29867317 tgaagattatggtaactaattctaaggaattgagtccaagaatcttcaaccccgaatttcttcatttgccatataataaaatcagtttcctt---agaat 29867221  T
Q  282 aagaaaaacaaaggcagtccctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagt 381  Q
    ||||||||||||||||||||| ||||||||||||| | || |   ||| ||| |||||||||||||   ||||||  || ||||| ||||||  ||||||    
T  29867220 aagaaaaacaaaggcagtcccccaacacaccaacaataggatatgcagacggcacctcatcaaaacttggaggcagtcggtattgattgtatttctcagt 29867121  T
Q  382 ccctaaatcaagtgaaacaataacaatctgctcaacagtaatatcct 428  Q
    ||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  29867120 ccccaaatcaagtgaaacaataacaaactggtcaacagtaatatcct 29867074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 194 - 428
Target Start/End: Complemental strand, 29881325 - 29881091
Alignment:
Q  194 taactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaa 293  Q
    ||||||||| |||| |||||||||||||| |||||||||||||||| |||||| ||||| | ||||||||| |||| ||| ||||||||| |||| ||||    
T  29881325 taactaattctaaggaattgagtccaagaatcttcaaccccaaatttcttcatttgccaaacaataaaatcagtttccttgtaacaataacaaaagcaaa 29881226  T
Q  294 ggcagtccctcaacacaccaacagttggctcct-cagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagtccctaaatcaa 392  Q
    ||||||||  ||||||||||||| |||| || | |||  || ||||||||||||| | ||||||  |||||||| ||||||| ||||||||| |||||||    
T  29881225 ggcagtcctccaacacaccaacaattgg-tcgtgcaggtggcacctcatcaaaactcggaggcagtcgatattgattgtatgtctcagtccccaaatcaa 29881127  T
Q  393 gtgaaacaataacaatctgctcaacagtaatatcct 428  Q
    |||||||||||||||  || ||||||||||||||||    
T  29881126 gtgaaacaataacaaattggtcaacagtaatatcct 29881091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 182 - 428
Target Start/End: Complemental strand, 29859535 - 29859289
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaat 281  Q
    |||||||  ||||||||||||||||||||| | |||||||| |||||||| ||||||| |||||||| ||||||||  |||||  ||| ||| |||||||    
T  29859535 tgaagattgtgataactaattttaagaaatggggtccaagaatcttcaactccaaatttcttcatctcccatataacgaaatcaatttccttgtaacaat 29859436  T
Q  282 aagaaaaacaaaggcagtccctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagt 381  Q
    |||||||||||||   ||||| ||||||||||| ||||||   | ||| ||| ||||||||||| ||  |||||||    ||||| |||||||  ||| |    
T  29859435 aagaaaaacaaagatggtcccccaacacaccaatagttggtatcacaggcggcacctcatcaaacccacgaggcaataagtattgattgtatgtttcact 29859336  T
Q  382 ccctaaatcaagtgaaacaataacaatctgctcaacagtaatatcct 428  Q
    ||| ||||||||||||||||||||||  || || |||||||||||||    
T  29859335 ccccaaatcaagtgaaacaataacaaattgttcgacagtaatatcct 29859289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 182 - 417
Target Start/End: Original strand, 29454092 - 29454327
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaat 281  Q
    |||||||| ||||||||||||||||  |||||||||||||| |||||||| ||||||| | ||||| ||||||||| |||||||| || ||| ||| |||    
T  29454092 tgaagatcttgataactaattttaaagaattgagtccaagaatcttcaactccaaatttcatcatccgccatataacaaaatcgggttccttgtaagaat 29454191  T
Q  282 aagaaaaacaaaggcagtccctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagt 381  Q
    |||||||||||||||   ||| ||| |||||||| |||||  | ||||  || |||||||||||| |  |||||||  | || |  ||||| | ||||||    
T  29454192 aagaaaaacaaaggcttccccccaaaacaccaaccgttggagcttcaggtggcacctcatcaaaatcacgaggcaattggtacttattgtacgtctcagt 29454291  T
Q  382 ccctaaatcaagtgaaacaataacaatctgctcaac 417  Q
    ||| ||||||||||||| |||||||| |||||||||    
T  29454292 ccccaaatcaagtgaaataataacaaactgctcaac 29454327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 191 - 425
Target Start/End: Original strand, 29921991 - 29922219
Alignment:
Q  191 tgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaac 290  Q
    |||||||||||| |||| ||||||| |||||| |||||| ||||||||| ||||||||||||||||| |||||| ||||  || |||  |||||||||||    
T  29921991 tgataactaattctaaggaattgagaccaagaatcttcatccccaaatttcttcatctgccatataacaaaatcagtttctttgtaagcataagaaaaac 29922090  T
Q  291 aaaggcagtccctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagtccctaaatc 390  Q
    |||||||| ||| |||||||||||| ||||| ||  |||  || || ||||||      ||||||||| ||||||| ||||||| ||| |||||||||||    
T  29922091 aaaggcagccccccaacacaccaacggttggttctgcagatggcacttcatca------agaggcaacagatattgattgtatgtctccgtccctaaatc 29922184  T
Q  391 aagtgaaacaataacaatctgctcaacagtaatat 425  Q
    ||| ||||| |||||||  || ||||| |||||||    
T  29922185 aagagaaacgataacaaaatgttcaactgtaatat 29922219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 168 - 417
Target Start/End: Original strand, 29476315 - 29476564
Alignment:
Q  168 agtcatggttcaactgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggt 267  Q
    |||||||||| |  |||||||  |||||||| ||||||||||||||||||||||| |  |||  ||| |||||||||||||||||||||| |||||||||    
T  29476315 agtcatggtttatttgaagattttgataacttattttaagaaattgagtccaagagttgtcattccctaattccttcatctgccatataagaaaatcggt 29476414  T
Q  268 tttcttataacaataagaaaaacaaaggcagtccctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgt 367  Q
    || ||| ||| |||| ||| |||||||| || ||| ||||||| ||||| |||||    |||  || |  ||||||||| |  ||||||  || |||||     
T  29476415 ttccttgtaaaaataggaacaacaaaggaagccccccaacacagcaacaattggcagggcagatggcatttcatcaaaatcacgaggcagacggtattga 29476514  T
Q  368 ttgtatgactcagtccctaaatcaagtgaaacaataacaatctgctcaac 417  Q
    ||||||| |||||| |||||||| |||||||||||||||| |||||||||    
T  29476515 ttgtatgtctcagttcctaaatcgagtgaaacaataacaaactgctcaac 29476564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 182 - 312
Target Start/End: Complemental strand, 29874592 - 29874461
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaat 281  Q
    |||||||  ||||||||||||||||| ||| |||||||||| |||||||||||||||| |||||| ||||||||||| ||||| |||| ||| |||||||    
T  29874592 tgaagattttgataactaattttaagtaatggagtccaagaatcttcaaccccaaatttcttcatttgccatataatgaaatcagtttccttgtaacaat 29874493  T
Q  282 aagaaaaacaaaggcagtc-cctcaacacacc 312  Q
    ||||||||||||| ||||| || |||||||||    
T  29874492 aagaaaaacaaagacagtcgccccaacacacc 29874461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 195 - 407
Target Start/End: Complemental strand, 29899442 - 29899224
Alignment:
Q  195 aactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatc------ggttttcttataacaataagaaaa 288  Q
    |||||||||| | |||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||      ||| || || ||| || |||||||    
T  29899442 aactaatttttaaaaattgagtccaggactcttcaaccccaaatttcttcatctgccatataacaaaatcaaaattggtattattgtaaaaacaagaaaa 29899343  T
Q  289 acaaaggcagtccctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagtccctaaa 388  Q
    |||||||||| ||| |||||||||||  ||||||||| ||| ||| || |||||||| ||  ||||||||   || || || |||| ||| ||| | |||    
T  29899342 acaaaggcagccccccaacacaccaaatgttggctccacagacggcacttcatcaaacccaggaggcaacatgtactgcttctatgtctccgtctccaaa 29899243  T
Q  389 tcaagtgaaacaataacaa 407  Q
    |||||||||||||||||||    
T  29899242 tcaagtgaaacaataacaa 29899224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 200 - 322
Target Start/End: Original strand, 29445663 - 29445785
Alignment:
Q  200 attttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaaggcagt 299  Q
    ||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||| ||| ||| |||||||| |||||||| ||     
T  29445663 atttttagaaattgagtccaagagtcttcaacccctaattccttcatctgccatataagaaaatcggtttccttgtaaaaataagaacaacaaaggaagc 29445762  T
Q  300 ccctcaacacaccaacagttggc 322  Q
    ||| |||||||| |||| |||||    
T  29445763 cccccaacacactaacaattggc 29445785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 182 - 262
Target Start/End: Original strand, 660836 - 660916
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaa 262  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||||||||||| ||||    
T  660836 tgaagattatgataactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataacaaaa 660916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 14076759 - 14076684
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataa 257  Q
    |||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  14076759 tgaagattctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataa 14076684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 182 - 257
Target Start/End: Complemental strand, 14386787 - 14386712
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataa 257  Q
    |||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  14386787 tgaagattctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataa 14386712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 192 - 294
Target Start/End: Original strand, 13416910 - 13417012
Alignment:
Q  192 gataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaaca 291  Q
    |||||||||||||||  |||| |  ||||||||||||||| |||||||||||||| |||||||| ||||||| |||||||||| ||  ||||||||||||    
T  13416910 gataactaattttaacgaattcaacccaagactcttcaactccaaattccttcatttgccatatgataaaataggttttcttaaaatcataagaaaaaca 13417009  T
Q  292 aag 294  Q
    |||    
T  13417010 aag 13417012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 194 - 429
Target Start/End: Complemental strand, 29106883 - 29106642
Alignment:
Q  194 taactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataa------taaaatcggttttcttataacaataagaaa 287  Q
    ||||||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| ||       |||||| |||||    ||  |||||||||    
T  29106883 taactaattttaaaaagttgagtccaagactcttcaaccccaaatttcttcatctgccatacaacaaaatcaaaatctgtttttacgtataaataagaaa 29106784  T
Q  288 aacaaaggcagtccctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagtccctaa 387  Q
    ||||||||||| ||| |||||||||||| ||||||   |  | ||| || |||||||| ||  ||||||||   ||||| ||||||| |||  |||   |    
T  29106783 aacaaaggcagccccccaacacaccaactgttggccgttttgacggcacttcatcaaacccacgaggcaacttgtattgattgtatgtctccatcctcca 29106684  T
Q  388 atcaagtgaaacaataacaatctgctcaacagtaatatcctc 429  Q
    ||||||||||||||||||||  ||  |||| |||||||||||    
T  29106683 atcaagtgaaacaataacaaattgaccaactgtaatatcctc 29106642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 310
Target Start/End: Original strand, 19604464 - 19604580
Alignment:
Q  194 taactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaa 293  Q
    |||||||||||||| ||||||||||| || |||||||| ||||||||||||||||||||||||||||| |  ||||| | | ||  || |||||||||||    
T  19604464 taactaattttaaggaattgagtccaggagtcttcaactccaaattccttcatctgccatataataaagtgagttttatgaaaatcatgagaaaaacaaa 19604563  T
Q  294 ggcagtccctcaacaca 310  Q
     | ||||| ||||||||    
T  19604564 tggagtccatcaacaca 19604580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 241 - 407
Target Start/End: Complemental strand, 29885270 - 29885104
Alignment:
Q  241 cttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaaggcagtccctcaacacaccaacagttggctcctcagtcggaacctca 340  Q
    ||||||||||||||||| |||||| |||| |||  || |||||||||||||||||||| |||  | ||||||||  ||||||||| ||| ||| || |||    
T  29885270 cttcatctgccatataacaaaatcagtttccttggaaaaataagaaaaacaaaggcagccccctagcacaccaaatgttggctccacagacggcacttca 29885171  T
Q  341 tcaaaacccagaggcaaccgatattgtttgtatgactcagtccctaaatcaagtgaaacaataacaa 407  Q
    ||||| ||  ||||||||   || || || |||| ||| ||| | ||||||||||||||||||||||    
T  29885170 tcaaacccaggaggcaacatgtactgcttctatgtctccgtctccaaatcaagtgaaacaataacaa 29885104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 310
Target Start/End: Original strand, 1985955 - 1986072
Alignment:
Q  193 ataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaa 292  Q
    ||||||||||||||  |||||||||||||| |||||||| |||||||||||||| ||||| | || ||||| |||||||||  ||  |||||||||| |     
T  1985955 ataactaattttaaacaattgagtccaagattcttcaacgccaaattccttcatttgccaaagaacaaaatgggttttcttgaaatcataagaaaaatag 1986054  T
Q  293 aggcagtccctcaacaca 310  Q
    ||||| ||| ||||||||    
T  1986055 aggcaatccatcaacaca 1986072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 19344577 - 19344645
Alignment:
Q  195 aactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||||||||||||||||||||||||||| | |||||| ||||||||| ||||||||||||||| |||||    
T  19344577 aactaattttaagaaattgagtccaagattgttcaactccaaattccatcatctgccatataacaaaat 19344645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 216 - 273
Target Start/End: Complemental strand, 9807871 - 9807814
Alignment:
Q  216 tccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttctt 273  Q
    |||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||    
T  9807871 tccaagactcttcaactccaaattccttcatctgccatataacgaaatcggttttctt 9807814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 182 - 297
Target Start/End: Original strand, 29430990 - 29431102
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaat 281  Q
    |||||||| ||||||||||||||||| ||||| |||||||| |||| | ||||||||| | ||||| ||||||||| ||||| ||| | |||   | |||    
T  29430990 tgaagatcctgataactaattttaaggaattgggtccaagaatctttagccccaaatttcatcatccgccatataacaaaataggtgtcctt---agaat 29431086  T
Q  282 aagaaaaacaaaggca 297  Q
    ||||||||||||||||    
T  29431087 aagaaaaacaaaggca 29431102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 6864796 - 6864860
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcat 246  Q
    ||||||| |||||||||| ||||||| || |||||||||||||||||||| ||||||||||||||    
T  6864796 tgaagattatgataactagttttaaggaactgagtccaagactcttcaactccaaattccttcat 6864860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 197 - 264
Target Start/End: Original strand, 19597659 - 19597726
Alignment:
Q  197 ctaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatc 264  Q
    |||||||| ||||| |||||||| |||||||||||  |||||||||||||||||||||| ||||||||    
T  19597659 ctaattttgagaaactgagtccatgactcttcaacttcaaattccttcatctgccatatgataaaatc 19597726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 191 - 294
Target Start/End: Complemental strand, 36260325 - 36260222
Alignment:
Q  191 tgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaac 290  Q
    ||||| |||||||||| || |||| |||||||||||||||| |||||||| | ||||| |||||||| |||||| |||||||| |||  || |||||| |    
T  36260325 tgatagctaattttaataagttgaatccaagactcttcaactccaaattcttccatcttccatataacaaaatcagttttcttgtaatcattagaaaagc 36260226  T
Q  291 aaag 294  Q
    ||||    
T  36260225 aaag 36260222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 211 - 306
Target Start/End: Complemental strand, 36263105 - 36263010
Alignment:
Q  211 ttgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaaggcagtccctcaa 306  Q
    ||||||||||||||||||||| |||||||| | ||||| |||||||| |||||| |||||||||||   || |||||| ||||| |||||| ||||    
T  36263105 ttgagtccaagactcttcaactccaaattcttccatcttccatataacaaaatcagttttcttatagtcattagaaaagcaaagacagtccatcaa 36263010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 18952906 - 18952975
Alignment:
Q  194 taactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||||||||||||| || |||||||| ||||  ||||| ||||||||||||||||||||||| |||||||    
T  18952906 taactaattttaaggaactgagtccatgacttgtcaactccaaattccttcatctgccatatgataaaat 18952975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 18982953 - 18983022
Alignment:
Q  194 taactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||||||||||||| || |||||||| ||||  ||||| ||||||||||||||||||||||| |||||||    
T  18982953 taactaattttaaggaactgagtccaggacttgtcaactccaaattccttcatctgccatatgataaaat 18983022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 194 - 263
Target Start/End: Original strand, 18997599 - 18997668
Alignment:
Q  194 taactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||||||||||||| || |||||||| ||||  ||||| ||||||||||||||||||||||| |||||||    
T  18997599 taactaattttaaggaactgagtccaggacttgtcaactccaaattccttcatctgccatatgataaaat 18997668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 19351058 - 19351139
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||||||| ||| |||||||||| || ||| ||||||||||||| ||||| ||||||||| |||||||||||| || |||||    
T  19351058 tgaagatcctgaaaactaattttgaggaatggagtccaagactcctcaactccaaattccatcatctgccataaaacaaaat 19351139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 22100565 - 22100493
Alignment:
Q  191 tgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||||||||||||| |  || |||||||||||||||| ||| ||||||| |||||| ||||||||||||||||    
T  22100565 tgataactaattttgaataactgagtccaagactcttgaactccaaatttcttcatttgccatataataaaat 22100493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 200 - 311
Target Start/End: Complemental strand, 22021455 - 22021344
Alignment:
Q  200 attttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaaggcagt 299  Q
    |||||||| |||||||||||||| |||||||| ||| | ||| |||||||||||||||  |||| |||||||||   |  || ||||||||||| ||| |    
T  22021455 attttaagtaattgagtccaagattcttcaactccataatccatcatctgccatataaccaaatgggttttcttcacaagatgagaaaaacaaatgcaat 22021356  T
Q  300 ccctcaacacac 311  Q
    || |||||||||    
T  22021355 ccatcaacacac 22021344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 193 - 291
Target Start/End: Original strand, 18514787 - 18514885
Alignment:
Q  193 ataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaaca 291  Q
    ||||||||||||||| |||||||||||||| | |||||| |||||||| | ||| | ||||||||| |||| | |||||||  ||  ||||||||||||    
T  18514787 ataactaattttaaggaattgagtccaagagttttcaactccaaattcgtccattttccatataatgaaatggcttttcttgaaatcataagaaaaaca 18514885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 193 - 255
Target Start/End: Original strand, 19645630 - 19645692
Alignment:
Q  193 ataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatat 255  Q
    ||||||||||||||| ||  ||||||| ||||||||||  |||||||||||||||||||||||    
T  19645630 ataactaattttaagtaacagagtccatgactcttcaattccaaattccttcatctgccatat 19645692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 182 - 256
Target Start/End: Complemental strand, 24385282 - 24385208
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatata 256  Q
    ||||||| ||||| |||||||||||||||| || ||||||||| |||||| ||||| | |||||||| |||||||    
T  24385282 tgaagattatgatgactaattttaagaaatcgactccaagacttttcaactccaaagttcttcatcttccatata 24385208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 204 - 417
Target Start/End: Complemental strand, 29895528 - 29895312
Alignment:
Q  204 taagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttctt---ataacaataagaaaaacaaaggcagtc 300  Q
    |||| |||||| ||||||||||||| | |||||||| |||||||||||||| || ||| ||| ||| |||   | || |||||||||||||||| ||| |    
T  29895528 taagtaattgactccaagactcttctatcccaaatttcttcatctgccataaaacaaattcgttttccttgtcagaagaataagaaaaacaaagacagcc 29895429  T
Q  301 cctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagtccctaaatcaagtgaaaca 400  Q
     | ||| |||| ||| ||||| |    ||  || |||||||||||||||||||||| | | ||||| ||||| | ||| || || |  ||||| ||||||    
T  29895428 acccaagacactaaccgttggttgtgtagggggcacctcatcaaaacccagaggcagcaggtattgattgtaagtctccgttcccagctcaagcgaaaca 29895329  T
Q  401 ataacaatctgctcaac 417  Q
    |||||||  ||||||||    
T  29895328 ataacaaattgctcaac 29895312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 182 - 255
Target Start/End: Complemental strand, 20352176 - 20352103
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatat 255  Q
    ||||||| || |||||||||||||| || ||||||||| || |||||||| |||||||||||||| | ||||||    
T  20352176 tgaagattatcataactaattttaaaaagttgagtccatgaatcttcaactccaaattccttcatttcccatat 20352103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 19357991 - 19357919
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccata 254  Q
    |||||||| ||| |||||||||| |  ||||||||||||||||||| ||| ||||||||| |||||| |||||    
T  19357991 tgaagatcctgaaaactaatttttaagaattgagtccaagactcttgaactccaaattccatcatcttccata 19357919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 22063714 - 22063642
Alignment:
Q  191 tgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||||||||||||| |  || |||||||||||||||| ||  |||||||||||||| |||||||||| |||||    
T  22063714 tgataactaattttgaataactgagtccaagactcttgaaatccaaattccttcatttgccatataacaaaat 22063642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 191 - 263
Target Start/End: Complemental strand, 22080940 - 22080868
Alignment:
Q  191 tgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||||||||||||| |  ||  ||||||||||||||| ||| ||||||| |||||| ||||||||||||||||    
T  22080940 tgataactaattttgaataaccgagtccaagactcttgaactccaaattgcttcatttgccatataataaaat 22080868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 24010464 - 24010392
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccata 254  Q
    |||||||  ||||||||||| ||||| ||||||||||||||||||| ||||||  | |||||||| |||||||    
T  24010464 tgaagattctgataactaatcttaagtaattgagtccaagactcttgaaccccgtactccttcatatgccata 24010392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 19637217 - 19637288
Alignment:
Q  193 ataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatc 264  Q
    ||||||||||||||| |   || |||| ||||||| ||| |||||||||||||| |||||||||||||||||    
T  19637217 ataactaattttaaggagccgaatccacgactcttgaactccaaattccttcatttgccatataataaaatc 19637288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 181 - 263
Target Start/End: Original strand, 12819904 - 12819986
Alignment:
Q  181 ctgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    ||||||||  ||| |||| |||||||| ||||||||||| || | |||||| ||||||||| |||||||||||| || |||||    
T  12819904 ctgaagattctgacaactgattttaaggaattgagtccaggattgttcaactccaaattccgtcatctgccatacaacaaaat 12819986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 241
Target Start/End: Complemental strand, 19374824 - 19374778
Alignment:
Q  195 aactaattttaagaaattgagtccaagactcttcaaccccaaattcc 241  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||    
T  19374824 aactaattttaagaaattgagtccaagaccgttcaactccaaattcc 19374778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 193 - 263
Target Start/End: Original strand, 20058057 - 20058127
Alignment:
Q  193 ataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    ||||||||||||||||||||||  ||||||||||||||| |  ||||||| ||| | |||||||| |||||    
T  20058057 ataactaattttaagaaattgacaccaagactcttcaactctgaattcctccattttccatataacaaaat 20058127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 202 - 268
Target Start/End: Complemental strand, 20414943 - 20414877
Alignment:
Q  202 tttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggtt 268  Q
    |||||| ||||||||||||||||  ||| | ||||||| | |||||| |||||||||||||||||||    
T  20414943 tttaaggaattgagtccaagacttgtcatctccaaatttcatcatcttccatataataaaatcggtt 20414877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 22028696 - 22028622
Alignment:
Q  195 aactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttt 269  Q
    ||||||| ||||| ||||||||||||||||||||||| ||| | ||| |||| | |||||||| ||||| |||||    
T  22028696 aactaatcttaagtaattgagtccaagactcttcaactccataatccgtcattttccatataacaaaatgggttt 22028622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 263
Target Start/End: Complemental strand, 22070161 - 22070111
Alignment:
Q  213 gagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    ||||||||||||||| ||| ||||||| |||||| ||||||||||||||||    
T  22070161 gagtccaagactcttgaactccaaattgcttcatttgccatataataaaat 22070111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 236 - 321
Target Start/End: Original strand, 29920086 - 29920171
Alignment:
Q  236 aattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaaggcagtccctcaacacaccaacagttgg 321  Q
    |||| |||||||| |||||| ||||| ||||||| ||| ||| |||||||| || |||||||| | | ||||||||||| ||||||    
T  29920086 aatttcttcatcttccatattataaattcggtttccttgtaagaataagaagaaaaaaggcagcctcccaacacaccaagagttgg 29920171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 24002280 - 24002208
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccata 254  Q
    |||||||  ||||||||||| ||||| ||||||||||||||||||| ||| ||  | |||||||| |||||||    
T  24002280 tgaagattctgataactaatcttaagtaattgagtccaagactcttgaactccgtactccttcatatgccata 24002208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 254
Target Start/End: Complemental strand, 26218048 - 26217976
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccata 254  Q
    ||||||| ||| |||||||| ||||  ||||||| ||||||||||| ||| ||| | ||||||||||||||||    
T  26218048 tgaagattatggtaactaatcttaaataattgagaccaagactcttgaactccatactccttcatctgccata 26217976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 29874732 - 29874648
Alignment:
Q  42 tattatctctccaattatagagaattgcatccctctcaagactactacgcaataccagtgtatcaccatccttagaaagaaacaa 126  Q
    ||||||||||| ||||||| |||||| | ||| | ||  |||| |||  ||||| ||||||||||||||||| ||||||||||||    
T  29874732 tattatctctcaaattatacagaattacttccatttcttgactgctatccaatatcagtgtatcaccatcctcagaaagaaacaa 29874648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 46769440 - 46769376
Alignment:
Q  194 taactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataat 258  Q
    |||||||||||||||| ||||||||||| ||||||||| || |||   ||||||||||| |||||    
T  46769440 taactaattttaagaagttgagtccaaggctcttcaactccgaatattttcatctgccacataat 46769376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 308
Target Start/End: Original strand, 16839397 - 16839496
Alignment:
Q  209 aattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaaaggcagtccctcaaca 308  Q
    ||||||||||||||||||| ||| ||| | ||  |||||| |||||||| || ||  |||||||||  |  || ||||||||||||||||||| ||||||    
T  16839397 aattgagtccaagactcttgaactccataatctgtcatcttccatataacaagatgagttttcttaacaacatgagaaaaacaaaggcagtccatcaaca 16839496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 184 - 258
Target Start/End: Complemental strand, 20410746 - 20410672
Alignment:
Q  184 aagatcatgataactaattttaagaaattgagtccaag-actcttcaaccccaaattccttcatctgccatataat 258  Q
    ||||| ||||||||||||||||||||||| |||||||| |||| ||||| ||||| || |||| |||||| |||||    
T  20410746 aagattatgataactaattttaagaaattaagtccaagtactc-tcaactccaaaatctttcacctgccaaataat 20410672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 268
Target Start/End: Complemental strand, 22534679 - 22534620
Alignment:
Q  209 aattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggtt 268  Q
    ||||| |||||||||| |||| | |||||||||| ||| |||||||| ||||||||||||    
T  22534679 aattgtgtccaagacttttcatctccaaattcctccatttgccatatgataaaatcggtt 22534620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Complemental strand, 26256829 - 26256774
Alignment:
Q  209 aattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatc 264  Q
    ||||||||||||||||||| ||| ||| | |||||||||||||||| || ||||||    
T  26256829 aattgagtccaagactcttgaactccatactccttcatctgccataaaacaaaatc 26256774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 254
Target Start/End: Complemental strand, 15444018 - 15443973
Alignment:
Q  209 aattgagtccaagactcttcaaccccaaattccttcatctgccata 254  Q
    ||||||||||||||||||||||| ||| | |||||||| |||||||    
T  15444018 aattgagtccaagactcttcaactccatactccttcatatgccata 15443973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 294
Target Start/End: Original strand, 15571895 - 15571996
Alignment:
Q  193 ataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaa 292  Q
    ||||||||||||| | ||||||  ||||||||||||||| ||||| ||| |||| ||||| || | ||||| ||||  |||  ||  |||||||||||||    
T  15571895 ataactaattttatggaattgaacccaagactcttcaactccaaactccctcatttgccacatgacaaaatgggttcccttgaaatcataagaaaaacaa 15571994  T
Q  293 ag 294  Q
    ||    
T  15571995 ag 15571996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 71
Target Start/End: Complemental strand, 19358156 - 19358123
Alignment:
Q  38 actctattatctctccaattatagagaattgcat 71  Q
    ||||| ||||||||||||||||||||||||||||    
T  19358156 actcttttatctctccaattatagagaattgcat 19358123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 20374492 - 20374565
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatat 255  Q
    ||||||| || |||||||||||||| || |||| |||| || ||| |||| |||||||||||||| | ||||||    
T  20374492 tgaagattattataactaattttaaaaagttgaatccatgaatctccaactccaaattccttcatttcccatat 20374565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 263
Target Start/End: Complemental strand, 19722086 - 19722018
Alignment:
Q  195 aactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||| ||||| || |||||||||||||| |||| ||| ||||||||| |||||| ||||| || |||||    
T  19722086 aactgattttgaggaattgagtccaagaatcttgaactccaaattccatcatcttccataaaacaaaat 19722018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 254
Target Start/End: Complemental strand, 23993604 - 23993544
Alignment:
Q  194 taactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccata 254  Q
    |||||||| ||||  ||||||||||||||||||| ||||||  | |||||||| |||||||    
T  23993604 taactaatcttaaataattgagtccaagactcttgaaccccgtactccttcatatgccata 23993544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 92; Significance: 2e-44; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 183 - 426
Target Start/End: Original strand, 24330889 - 24331132
Alignment:
Q  183 gaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaata 282  Q
    |||||| ||| ||||||| |||||| | |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||||| ||| ||  ||||    
T  24330889 gaagattatggtaactaactttaaggagttgagtccaagaatcttcaaccccaaattccttcatctcccatataacaaaatcggtttccttgtacgaata 24330988  T
Q  283 agaaaaacaaaggcagtccctcaacacaccaacagttggctcctcagtcggaacctcatcaaaacccagaggcaaccgatattgtttgtatgactcagtc 382  Q
     ||||||||||| ||| ||||||| ||||||| ||||||||| |  | |||||| |||||||||||  ||||||     ||||| ||||||| ||| |||    
T  24330989 tgaaaaacaaagacagcccctcaatacaccaatagttggctctttcggcggaacttcatcaaaaccatgaggcataatgtattgattgtatgtctccgtc 24331088  T
Q  383 cctaaatcaagtgaaacaataacaatctgctcaacagtaatatc 426  Q
     | |||||||| |||||||| |||| ||| ||||||||||||||    
T  24331089 tccaaatcaagagaaacaatcacaaactggtcaacagtaatatc 24331132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 182 - 263
Target Start/End: Original strand, 18964819 - 18964900
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||||||  ||||||| |||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||||| ||||    
T  18964819 tgaagattctgataacaaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgccatataatgaaat 18964900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 263
Target Start/End: Original strand, 29597554 - 29597622
Alignment:
Q  195 aactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    ||||||||||||| |||||||||||||| | |||||| ||||||||  |||| |||||||||| |||||    
T  29597554 aactaattttaaggaattgagtccaagattgttcaactccaaattcaatcatttgccatataacaaaat 29597622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 29647744 - 29647665
Alignment:
Q  195 aactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttctta 274  Q
    ||||||||||||| |||||||||||||| | |||||  ||||||||  |||| |||||||||| |||||  |||||||||    
T  29647744 aactaattttaaggaattgagtccaagattgttcaaatccaaattctatcatttgccatataacaaaatgagttttctta 29647665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 212 - 257
Target Start/End: Complemental strand, 23086833 - 23086788
Alignment:
Q  212 tgagtccaagactcttcaaccccaaattccttcatctgccatataa 257  Q
    |||||||||||||||| ||| ||||| |||||||||||||||||||    
T  23086833 tgagtccaagactcttgaactccaaactccttcatctgccatataa 23086788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 69
Target Start/End: Original strand, 18964672 - 18964703
Alignment:
Q  38 actctattatctctccaattatagagaattgc 69  Q
    ||||||||||||||||||||||||||||||||    
T  18964672 actctattatctctccaattatagagaattgc 18964703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 274
Target Start/End: Complemental strand, 29642427 - 29642348
Alignment:
Q  195 aactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttctta 274  Q
    ||||||||||||| |||||||||||||| | |||||  ||||||||  |||| ||||||||||  ||||  |||||||||    
T  29642427 aactaattttaaggaattgagtccaagattgttcaaatccaaattctatcatttgccatataacgaaatgagttttctta 29642348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 193 - 306
Target Start/End: Original strand, 6921350 - 6921463
Alignment:
Q  193 ataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaa 292  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||| |||| ||||| |||||||||| ||  |||||||||| |     
T  6921350 ataactaattttaaggaattgagtccaagattcttcaactccaaattccttcatttgccagataacaaaatgggttttcttagaatcataagaaaaatag 6921449  T
Q  293 aggcagtccctcaa 306  Q
    ||||| ||| ||||    
T  6921450 aggcaatccatcaa 6921463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 182 - 252
Target Start/End: Complemental strand, 17369745 - 17369675
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgcca 252  Q
    |||||||  |||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||||    
T  17369745 tgaagattctgataactaattttaagaaattgagtccaagagtcttcaactccaaattccttcatttgcca 17369675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 310
Target Start/End: Original strand, 6947880 - 6947997
Alignment:
Q  193 ataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaa 292  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||||||||||| ||||| | || ||| | |||||||||  ||  ||  |||||||||    
T  6947880 ataactaattttaaggaattgagtccaagattcttcaactccaaattccttcatttgccaaagaacaaagtgggttttcttgaaatcatgtgaaaaacaa 6947979  T
Q  293 aggcagtccctcaacaca 310  Q
    ||||| ||| ||||||||    
T  6947980 aggcaatccatcaacaca 6947997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 182 - 263
Target Start/End: Complemental strand, 20770731 - 20770650
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    ||||||| |||||||||||||||||| |||||| |||| ||||||||||  |||||||||||||| |||||||||| |||||    
T  20770731 tgaagattatgataactaattttaaggaattgaatccatgactcttcaattccaaattccttcatttgccatataacaaaat 20770650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 193 - 306
Target Start/End: Original strand, 6935218 - 6935331
Alignment:
Q  193 ataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaa 292  Q
    ||||||||||||||| |||| ||||||||| |||| ||| |||||||||||||| ||||| |||| | ||| |||||||||| ||  |||||||||| |     
T  6935218 ataactaattttaaggaatttagtccaagattcttgaactccaaattccttcatttgccaaataacataatgggttttcttaaaatcataagaaaaatag 6935317  T
Q  293 aggcagtccctcaa 306  Q
    ||||| ||| ||||    
T  6935318 aggcaatccatcaa 6935331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 195 - 270
Target Start/End: Original strand, 6954521 - 6954596
Alignment:
Q  195 aactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggtttt 270  Q
    ||||||||||||  |||||||||||||| |||||||| |||||||||||||| ||||| |||| ||||| ||||||    
T  6954521 aactaattttaatcaattgagtccaagattcttcaactccaaattccttcatttgccaaataacaaaatgggtttt 6954596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 197 - 289
Target Start/End: Original strand, 6942971 - 6943063
Alignment:
Q  197 ctaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaa 289  Q
    ||||||||||| ||||| ||| |||| |||||||| |||||||||||||| ||| | |||| ||||| |||||||||| ||  ||||||||||    
T  6942971 ctaattttaaggaattgcgtctaagattcttcaactccaaattccttcatttgctaaataacaaaataggttttcttaaaatcataagaaaaa 6943063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 197 - 247
Target Start/End: Complemental strand, 14749463 - 14749413
Alignment:
Q  197 ctaattttaagaaattgagtccaagactcttcaaccccaaattccttcatc 247  Q
    |||||||| || ||||||||||||||||||| ||| ||||||||| |||||    
T  14749463 ctaattttgaggaattgagtccaagactcttgaactccaaattccatcatc 14749413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 212 - 273
Target Start/End: Complemental strand, 5979078 - 5979017
Alignment:
Q  212 tgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttctt 273  Q
    ||||||||||||||||  || ||||| ||||||||| ||||||||| ||| |||||| ||||    
T  5979078 tgagtccaagactcttggactccaaactccttcatcagccatataacaaattcggttctctt 5979017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 193 - 310
Target Start/End: Complemental strand, 14514970 - 14514853
Alignment:
Q  193 ataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaacaa 292  Q
    ||||||||||||||| |||||||||||||| |||||||| |||||||| | ||| | |||||||| || || |||||||||  ||  ||||||||||||     
T  14514970 ataactaattttaaggaattgagtccaagaatcttcaactccaaattcatccattttccatataacaagatgggttttcttgaaatcataagaaaaacac 14514871  T
Q  293 aggcagtccctcaacaca 310  Q
    | ||||||||| ||||||    
T  14514870 atgcagtcccttaacaca 14514853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 182 - 269
Target Start/End: Original strand, 18908798 - 18908885
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttt 269  Q
    |||||||  ||| |||||||||| || ||||||||||||||||||| ||| ||||||||| |||||| |||||||| ||||| |||||    
T  18908798 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgggttt 18908885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 182 - 269
Target Start/End: Original strand, 18920754 - 18920841
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttt 269  Q
    |||||||  ||| |||||||||| || ||||||||||||||||||| ||| ||||||||| |||||| |||||||| ||||| |||||    
T  18920754 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgggttt 18920841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 182 - 268
Target Start/End: Original strand, 18913546 - 18913632
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggtt 268  Q
    |||||||  ||| |||||||||| || ||||||||||||||||||| ||| ||||||||| |||||| |||||||| ||||| ||||    
T  18913546 tgaagattttgaaaactaattttgaggaattgagtccaagactcttgaactccaaattccatcatcttccatataacaaaatgggtt 18913632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 193 - 260
Target Start/End: Complemental strand, 554546 - 554479
Alignment:
Q  193 ataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataa 260  Q
    ||||||||||||||| ||||||||||||||||||| ||| ||| ||||  |||| |||||||||||||    
T  554546 ataactaattttaagtaattgagtccaagactctttaactccatattctatcatttgccatataataa 554479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 25377145 - 25377074
Alignment:
Q  192 gataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||||||||||||||  |||||| |||||||||||| ||| ||||| |||||||||  |||||||| |||||    
T  25377145 gataactaattttaaataattgaatccaagactcttgaactccaaaatccttcatcatccatataacaaaat 25377074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 21021279 - 21021339
Alignment:
Q  203 ttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    ||||| |||| |||||| |||| |||||| | |||||||||||||||||||||| ||||||    
T  21021279 ttaagcaatttagtccatgacttttcaactctaaattccttcatctgccatatagtaaaat 21021339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 211 - 323
Target Start/End: Original strand, 10205462 - 10205574
Alignment:
Q  211 ttgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttctt-ataacaataagaaaaacaaaggcagtccctcaacac 309  Q
    ||||||||||||||||||||| ||| | ||  |||||| |||||||| |||||  |||||||| | |||| ||| ||||||||||| | ||| |||| ||    
T  10205462 ttgagtccaagactcttcaacaccatactcagtcatcttccatataacaaaatgagttttcttaacaacattaa-aaaaacaaaggaaatccatcaagac 10205560  T
Q  310 accaacagttggct 323  Q
    ||| | ||||||||    
T  10205561 acctagagttggct 10205574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 42 - 71
Target Start/End: Original strand, 18913379 - 18913408
Alignment:
Q  42 tattatctctccaattatagagaattgcat 71  Q
    ||||||||||||||||||||||||||||||    
T  18913379 tattatctctccaattatagagaattgcat 18913408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 181 - 257
Target Start/End: Complemental strand, 2576964 - 2576888
Alignment:
Q  181 ctgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataa 257  Q
    ||||||||  || |||||||||||||| | ||||||||| | ||||||||| ||||    |||||||||||||||||    
T  2576964 ctgaagattttggtaactaattttaaggagttgagtccatggctcttcaactccaatgatcttcatctgccatataa 2576888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 194 - 258
Target Start/End: Complemental strand, 2596076 - 2596012
Alignment:
Q  194 taactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataat 258  Q
    |||||||||||||| | ||||||||| | ||||||||| ||||    ||||||||||||||||||    
T  2596076 taactaattttaaggagttgagtccatggctcttcaactccaataatcttcatctgccatataat 2596012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 322
Target Start/End: Original strand, 13719 - 13859
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaat 281  Q
    |||||||  ||||| || ||||||||||| ||||||||||| || |||   || |||||||||||||||||||||| |||||||||||  || ||| |||    
T  13719 tgaagattttgataccttattttaagaaactgagtccaagattcatcatttcctaattccttcatctgccatataagaaaatcggtttctttgtaaaaat 13818  T
Q  282 aagaaaaacaaaggcagtccctcaacacaccaacagttggc 322  Q
    | ||| |||||||| || ||| ||| ||| ||||| |||||    
T  13819 aggaacaacaaaggaagccccccaagacagcaacaattggc 13859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 182 - 322
Target Start/End: Original strand, 22554 - 22694
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaat 281  Q
    |||||||  ||||| || ||||||||||| ||||||||||| || |||   || |||||||||||||||||||||| |||||||||||  || ||| |||    
T  22554 tgaagattttgataccttattttaagaaactgagtccaagattcatcatttcctaattccttcatctgccatataagaaaatcggtttctttgtaaaaat 22653  T
Q  282 aagaaaaacaaaggcagtccctcaacacaccaacagttggc 322  Q
    | ||| |||||||| || ||| ||| ||| ||||| |||||    
T  22654 aggaacaacaaaggaagccccccaagacagcaacaattggc 22694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0867 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 191 - 263
Target Start/End: Original strand, 4667 - 4739
Alignment:
Q  191 tgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaat 263  Q
    |||||||||||||| |  || |||||||||||||||| ||| ||||||| |||||| ||||||||||||||||    
T  4667 tgataactaattttgaataactgagtccaagactcttgaactccaaatttcttcatttgccatataataaaat 4739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0649 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 191 - 297
Target Start/End: Complemental strand, 5510 - 5404
Alignment:
Q  191 tgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggttttcttataacaataagaaaaac 290  Q
    |||||||||| |||||| ||   |||||||||||||||||| | |||||  |||||||||||||||| ||||||  ||| |||| || ||| | ||||||    
T  5510 tgataactaaatttaaggaacatagtccaagactcttcaactctaaattttttcatctgccatataacaaaatcattttccttagaataatgacaaaaac 5411  T
Q  291 aaaggca 297  Q
    |||||||    
T  5410 aaaggca 5404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0354 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0354
Description:

Target: scaffold0354; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 255
Target Start/End: Complemental strand, 7534 - 7471
Alignment:
Q  192 gataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatat 255  Q
    |||| ||||||||||| ||||||  ||||||||| ||||| |||||||||||||| ||||||||    
T  7534 gatagctaattttaaggaattgaacccaagactcatcaactccaaattccttcatttgccatat 7471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 31; Significance: 0.00000004; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 194 - 268
Target Start/End: Complemental strand, 29157117 - 29157043
Alignment:
Q  194 taactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggtt 268  Q
    |||||||||||||| | ||||||||| | ||||||||| ||||||   | ||||||||||||||| || ||||||    
T  29157117 taactaattttaaggagttgagtccatggctcttcaactccaaatgtttccatctgccatataatgaattcggtt 29157043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 191 - 257
Target Start/End: Complemental strand, 29390358 - 29390292
Alignment:
Q  191 tgataactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataa 257  Q
    |||||||||| || ||  |||| ||| ||||| |||||||| ||||||||| |||||||||||||||    
T  29390358 tgataactaaattgaaacaatttagttcaagattcttcaactccaaattccctcatctgccatataa 29390292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 182 - 231
Target Start/End: Complemental strand, 27618572 - 27618523
Alignment:
Q  182 tgaagatcatgataactaattttaagaaattgagtccaagactcttcaac 231  Q
    |||||||  |||||||||| |||||| || ||||||||||||||||||||    
T  27618572 tgaagattctgataactaactttaagcaactgagtccaagactcttcaac 27618523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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