View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20608_high_13 (Length: 329)

Name: NF20608_high_13
Description: NF20608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20608_high_13
NF20608_high_13
[»] chr8 (43 HSPs)
chr8 (17-316)||(8018543-8018842)
chr8 (17-124)||(10694781-10694888)
chr8 (17-119)||(45337983-45338085)
chr8 (17-117)||(21016085-21016185)
chr8 (17-124)||(6433518-6433625)
chr8 (19-125)||(37433239-37433344)
chr8 (17-94)||(6939162-6939239)
chr8 (17-94)||(21016238-21016315)
chr8 (17-106)||(26195401-26195490)
chr8 (19-116)||(34713951-34714048)
chr8 (214-316)||(8028138-8028242)
chr8 (17-118)||(3174436-3174541)
chr8 (17-120)||(19389338-19389441)
chr8 (17-94)||(25249369-25249446)
chr8 (17-109)||(18068951-18069043)
chr8 (17-126)||(4989908-4990014)
chr8 (17-118)||(14855412-14855513)
chr8 (17-123)||(44874308-44874406)
chr8 (17-125)||(26892759-26892867)
chr8 (25-123)||(11295500-11295598)
chr8 (17-125)||(26672763-26672871)
chr8 (17-117)||(5129484-5129590)
chr8 (25-112)||(11332830-11332917)
chr8 (38-124)||(33741523-33741609)
chr8 (27-118)||(4308789-4308880)
chr8 (26-124)||(38869978-38870076)
chr8 (31-107)||(6396315-6396391)
chr8 (25-118)||(7532767-7532858)
chr8 (32-118)||(39972195-39972281)
chr8 (33-118)||(20212433-20212518)
chr8 (25-108)||(24304932-24305014)
chr8 (31-106)||(37922972-37923046)
chr8 (30-80)||(31596462-31596512)
chr8 (26-106)||(30351583-30351664)
chr8 (17-66)||(35930168-35930217)
chr8 (58-118)||(5300203-5300263)
chr8 (61-92)||(41689095-41689126)
chr8 (30-80)||(17319995-17320045)
chr8 (50-116)||(35455250-35455316)
chr8 (17-66)||(29450926-29450975)
chr8 (25-66)||(35237006-35237046)
chr8 (38-118)||(7444258-7444338)
chr8 (37-73)||(39491855-39491891)
[»] chr3 (42 HSPs)
chr3 (17-125)||(36730181-36730289)
chr3 (17-125)||(44570414-44570522)
chr3 (17-125)||(51817340-51817448)
chr3 (17-148)||(8715529-8715665)
chr3 (17-148)||(9067416-9067552)
chr3 (17-148)||(52570730-52570863)
chr3 (17-117)||(4759878-4759978)
chr3 (17-123)||(46317461-46317567)
chr3 (17-125)||(32415542-32415650)
chr3 (26-123)||(37509086-37509183)
chr3 (17-123)||(10854834-10854940)
chr3 (17-123)||(29915603-29915709)
chr3 (17-123)||(29964756-29964862)
chr3 (17-122)||(12905311-12905415)
chr3 (17-125)||(12051011-12051119)
chr3 (17-125)||(35306305-35306413)
chr3 (38-147)||(31647253-31647364)
chr3 (17-123)||(20227408-20227514)
chr3 (17-126)||(8847480-8847589)
chr3 (17-114)||(44695699-44695796)
chr3 (17-125)||(25102350-25102457)
chr3 (25-106)||(34060802-34060883)
chr3 (25-94)||(41345979-41346048)
chr3 (17-117)||(45899571-45899672)
chr3 (53-121)||(51256137-51256205)
chr3 (31-118)||(11316946-11317033)
chr3 (33-80)||(49976185-49976232)
chr3 (26-103)||(34750294-34750371)
chr3 (27-79)||(41998901-41998953)
chr3 (32-83)||(21324531-21324582)
chr3 (25-118)||(11675293-11675384)
chr3 (36-89)||(18834-18887)
chr3 (36-89)||(18975-19028)
chr3 (24-73)||(29213395-29213444)
chr3 (31-90)||(39974848-39974907)
chr3 (17-67)||(1803919-1803969)
chr3 (51-125)||(45503367-45503441)
chr3 (29-66)||(4298369-4298406)
chr3 (26-63)||(13647073-13647110)
chr3 (17-74)||(26850522-26850579)
chr3 (27-68)||(32070679-32070720)
chr3 (25-70)||(39436493-39436538)
[»] chr2 (50 HSPs)
chr2 (17-148)||(39401563-39401690)
chr2 (17-125)||(2966513-2966621)
chr2 (17-125)||(6999175-6999283)
chr2 (30-125)||(17056098-17056193)
chr2 (30-125)||(17068545-17068640)
chr2 (17-125)||(862562-862670)
chr2 (17-125)||(27495096-27495204)
chr2 (17-125)||(41436451-41436559)
chr2 (30-125)||(17074528-17074623)
chr2 (30-125)||(17095107-17095202)
chr2 (17-121)||(35445318-35445423)
chr2 (18-125)||(9201524-9201630)
chr2 (23-126)||(23685686-23685789)
chr2 (17-124)||(39085820-39085927)
chr2 (29-123)||(44299721-44299815)
chr2 (17-125)||(16361539-16361647)
chr2 (17-123)||(17118401-17118506)
chr2 (17-94)||(765178-765255)
chr2 (17-123)||(33726355-33726461)
chr2 (28-108)||(2239572-2239652)
chr2 (38-120)||(15004905-15004987)
chr2 (17-119)||(44173099-44173200)
chr2 (26-123)||(33864331-33864427)
chr2 (25-125)||(11659235-11659335)
chr2 (49-124)||(11445379-11445454)
chr2 (17-123)||(464770-464877)
chr2 (17-119)||(1321147-1321249)
chr2 (17-94)||(13997932-13998009)
chr2 (17-94)||(17603815-17603892)
chr2 (17-107)||(3454726-3454815)
chr2 (24-125)||(33848959-33849060)
chr2 (25-106)||(2805373-2805456)
chr2 (17-62)||(11445319-11445364)
chr2 (25-65)||(37230253-37230293)
chr2 (17-85)||(43140351-43140419)
chr2 (25-83)||(747527-747585)
chr2 (24-74)||(9965090-9965140)
chr2 (37-125)||(12695286-12695373)
chr2 (35-83)||(34220692-34220740)
chr2 (26-118)||(34392589-34392677)
chr2 (31-94)||(34512650-34512713)
chr2 (17-107)||(10900278-10900368)
chr2 (41-123)||(16242002-16242084)
chr2 (60-118)||(41890182-41890240)
chr2 (44-125)||(19851645-19851726)
chr2 (25-73)||(5671554-5671602)
chr2 (27-79)||(7888594-7888646)
chr2 (38-74)||(8327004-8327040)
chr2 (31-83)||(29260170-29260222)
chr2 (38-114)||(40798372-40798448)
[»] chr7 (55 HSPs)
chr7 (17-123)||(5240360-5240466)
chr7 (17-125)||(8380414-8380522)
chr7 (17-125)||(29034660-29034768)
chr7 (17-124)||(7322981-7323088)
chr7 (17-106)||(40763241-40763330)
chr7 (25-125)||(42222194-42222294)
chr7 (17-119)||(40066945-40067045)
chr7 (17-123)||(41188814-41188920)
chr7 (31-120)||(27053535-27053624)
chr7 (17-122)||(49069531-49069636)
chr7 (25-129)||(30388696-30388800)
chr7 (31-117)||(29687457-29687543)
chr7 (23-112)||(8258672-8258761)
chr7 (31-120)||(24359750-24359839)
chr7 (17-125)||(8292718-8292826)
chr7 (17-117)||(5348000-5348097)
chr7 (17-123)||(22521561-22521667)
chr7 (20-94)||(43567537-43567611)
chr7 (17-94)||(31626069-31626146)
chr7 (17-125)||(1910217-1910325)
chr7 (17-123)||(46478584-46478689)
chr7 (17-89)||(3681703-3681775)
chr7 (17-106)||(40194818-40194907)
chr7 (17-147)||(36279073-36279200)
chr7 (17-101)||(46042745-46042828)
chr7 (32-125)||(10575802-10575895)
chr7 (17-74)||(48454850-48454907)
chr7 (31-118)||(16082474-16082561)
chr7 (25-118)||(4686079-4686172)
chr7 (26-118)||(32204162-32204254)
chr7 (40-122)||(16931867-16931949)
chr7 (40-122)||(16937250-16937332)
chr7 (52-126)||(16957638-16957711)
chr7 (17-94)||(22707053-22707130)
chr7 (17-78)||(30538508-30538569)
chr7 (17-94)||(43958111-43958188)
chr7 (33-118)||(44296945-44297030)
chr7 (26-106)||(3720151-3720231)
chr7 (36-107)||(6548521-6548592)
chr7 (32-83)||(18529196-18529247)
chr7 (68-123)||(29959042-29959097)
chr7 (32-123)||(34835839-34835930)
chr7 (25-83)||(5543061-5543119)
chr7 (17-66)||(35003637-35003685)
chr7 (26-83)||(40774279-40774336)
chr7 (43-107)||(18800202-18800266)
chr7 (32-123)||(48879645-48879736)
chr7 (37-83)||(43189685-43189731)
chr7 (25-118)||(1907625-1907717)
chr7 (27-68)||(21577681-21577722)
chr7 (25-82)||(41141040-41141097)
chr7 (31-83)||(5977757-5977809)
chr7 (27-75)||(35239825-35239873)
chr7 (29-104)||(42291274-42291350)
chr7 (27-79)||(48705650-48705702)
[»] chr1 (51 HSPs)
chr1 (17-122)||(43433751-43433856)
chr1 (17-123)||(22346262-22346368)
chr1 (17-149)||(27209746-27209881)
chr1 (17-120)||(34874545-34874648)
chr1 (17-125)||(24140746-24140854)
chr1 (17-117)||(33929947-33930047)
chr1 (26-116)||(47655405-47655495)
chr1 (19-124)||(47895308-47895413)
chr1 (17-125)||(11385954-11386062)
chr1 (17-125)||(41147503-41147611)
chr1 (17-123)||(28850935-28851040)
chr1 (17-106)||(42607349-42607438)
chr1 (17-118)||(49901906-49902007)
chr1 (17-125)||(4940765-4940873)
chr1 (17-125)||(6170576-6170684)
chr1 (17-125)||(11385835-11385943)
chr1 (17-123)||(2125732-2125838)
chr1 (17-123)||(7190500-7190606)
chr1 (17-123)||(49508759-49508864)
chr1 (17-122)||(50154449-50154554)
chr1 (17-88)||(40845261-40845332)
chr1 (17-89)||(32213914-32213986)
chr1 (17-120)||(28277507-28277610)
chr1 (17-122)||(932182-932287)
chr1 (32-125)||(44359712-44359805)
chr1 (17-94)||(50295458-50295535)
chr1 (17-117)||(26469607-26469707)
chr1 (17-125)||(52396416-52396523)
chr1 (25-122)||(8892804-8892901)
chr1 (32-125)||(14331810-14331903)
chr1 (17-126)||(31975459-31975568)
chr1 (17-120)||(29966800-29966904)
chr1 (31-123)||(48938611-48938702)
chr1 (17-126)||(45721727-45721833)
chr1 (32-122)||(43168117-43168207)
chr1 (17-94)||(4656020-4656097)
chr1 (25-118)||(17402928-17403021)
chr1 (26-118)||(40920165-40920259)
chr1 (17-71)||(5945447-5945501)
chr1 (25-83)||(41898892-41898950)
chr1 (31-105)||(30222613-30222688)
chr1 (27-79)||(51046679-51046731)
chr1 (25-123)||(25177482-25177580)
chr1 (25-106)||(21268328-21268408)
chr1 (28-73)||(27210750-27210795)
chr1 (25-118)||(51424137-51424230)
chr1 (47-83)||(46296240-46296276)
chr1 (31-93)||(8414856-8414918)
chr1 (27-73)||(32268034-32268080)
chr1 (35-73)||(44043500-44043538)
chr1 (37-94)||(44286876-44286933)
[»] chr4 (62 HSPs)
chr4 (17-125)||(51266897-51267005)
chr4 (17-124)||(30475399-30475506)
chr4 (19-125)||(47188695-47188801)
chr4 (17-123)||(50514641-50514747)
chr4 (17-120)||(26040388-26040491)
chr4 (17-123)||(34316750-34316857)
chr4 (26-125)||(45688716-45688815)
chr4 (17-123)||(10100141-10100247)
chr4 (17-123)||(35808424-35808530)
chr4 (17-122)||(31754914-31755019)
chr4 (17-125)||(33951673-33951781)
chr4 (17-125)||(55669712-55669820)
chr4 (17-125)||(2362602-2362712)
chr4 (17-124)||(41956241-41956348)
chr4 (17-123)||(19328956-19329062)
chr4 (17-123)||(23765553-23765659)
chr4 (17-122)||(20811239-20811344)
chr4 (26-149)||(31168080-31168206)
chr4 (17-124)||(54339087-54339193)
chr4 (17-122)||(32131118-32131223)
chr4 (17-123)||(34016600-34016706)
chr4 (17-153)||(45088016-45088148)
chr4 (17-126)||(26831814-26831922)
chr4 (17-118)||(52341581-52341682)
chr4 (25-125)||(15986239-15986339)
chr4 (17-125)||(27839334-27839442)
chr4 (25-125)||(48513592-48513692)
chr4 (46-124)||(9693528-9693606)
chr4 (26-107)||(3769804-3769885)
chr4 (32-125)||(31494704-31494797)
chr4 (30-123)||(40436056-40436149)
chr4 (47-123)||(53567011-53567087)
chr4 (32-107)||(35675233-35675308)
chr4 (26-125)||(51018416-51018515)
chr4 (25-124)||(52895698-52895797)
chr4 (25-125)||(20456542-20456642)
chr4 (25-82)||(46823488-46823545)
chr4 (17-89)||(29462810-29462882)
chr4 (24-83)||(36486721-36486780)
chr4 (25-124)||(55120066-55120164)
chr4 (17-63)||(19876211-19876257)
chr4 (50-124)||(23690980-23691054)
chr4 (32-117)||(30617930-30618015)
chr4 (26-118)||(966562-966654)
chr4 (17-65)||(1801635-1801683)
chr4 (17-73)||(3472148-3472204)
chr4 (25-73)||(35511216-35511264)
chr4 (31-83)||(35927316-35927368)
chr4 (25-68)||(11996139-11996182)
chr4 (17-76)||(31487743-31487802)
chr4 (36-118)||(39158373-39158455)
chr4 (40-117)||(1457586-1457663)
chr4 (17-66)||(3684579-3684628)
chr4 (26-74)||(23260728-23260777)
chr4 (26-83)||(52021047-52021104)
chr4 (25-90)||(53484623-53484688)
chr4 (27-79)||(4867807-4867859)
chr4 (25-73)||(31010463-31010511)
chr4 (31-83)||(32584561-32584613)
chr4 (32-80)||(40593620-40593667)
chr4 (17-53)||(46695990-46696026)
chr4 (25-73)||(49483122-49483170)
[»] chr5 (48 HSPs)
chr5 (17-122)||(12914151-12914256)
chr5 (17-125)||(13951264-13951372)
chr5 (17-148)||(25017319-25017453)
chr5 (17-125)||(34546751-34546859)
chr5 (17-125)||(35653283-35653391)
chr5 (17-125)||(4962544-4962652)
chr5 (17-119)||(5151468-5151570)
chr5 (17-123)||(12068202-12068307)
chr5 (17-125)||(16315562-16315668)
chr5 (17-125)||(8410115-8410223)
chr5 (17-95)||(1759820-1759898)
chr5 (17-119)||(28143151-28143253)
chr5 (17-122)||(3639103-3639207)
chr5 (17-122)||(35945222-35945327)
chr5 (17-125)||(4421992-4422100)
chr5 (17-126)||(25568320-25568429)
chr5 (17-89)||(37243856-37243928)
chr5 (17-125)||(39567876-39567984)
chr5 (17-125)||(27823235-27823340)
chr5 (26-124)||(39692984-39693082)
chr5 (17-106)||(338792-338881)
chr5 (17-90)||(1479164-1479237)
chr5 (30-117)||(39335454-39335541)
chr5 (17-107)||(43414092-43414182)
chr5 (25-114)||(10406772-10406860)
chr5 (32-103)||(10017664-10017733)
chr5 (30-106)||(10163667-10163743)
chr5 (25-125)||(39167569-39167668)
chr5 (52-94)||(16899635-16899677)
chr5 (25-83)||(39069312-39069370)
chr5 (51-122)||(15915014-15915083)
chr5 (26-118)||(20184585-20184677)
chr5 (50-105)||(4293892-4293947)
chr5 (57-120)||(4838259-4838322)
chr5 (25-68)||(24288517-24288560)
chr5 (25-68)||(24373661-24373704)
chr5 (26-125)||(38610329-38610428)
chr5 (17-124)||(39042063-39042170)
chr5 (25-78)||(27535114-27535168)
chr5 (17-73)||(28599682-28599738)
chr5 (30-66)||(40099364-40099400)
chr5 (31-66)||(5058777-5058812)
chr5 (25-83)||(678465-678523)
chr5 (31-73)||(12349586-12349628)
chr5 (17-59)||(15915871-15915913)
chr5 (31-95)||(6823794-6823859)
chr5 (31-83)||(3015092-3015144)
chr5 (30-94)||(19894822-19894886)
[»] chr6 (26 HSPs)
chr6 (17-125)||(10855406-10855513)
chr6 (32-126)||(12191465-12191559)
chr6 (17-125)||(7875209-7875317)
chr6 (31-149)||(7880469-7880590)
chr6 (17-125)||(5578247-5578355)
chr6 (17-124)||(7274242-7274349)
chr6 (57-125)||(32786042-32786110)
chr6 (31-94)||(6866919-6866982)
chr6 (17-123)||(12175535-12175640)
chr6 (31-125)||(26572119-26572213)
chr6 (17-75)||(29692369-29692427)
chr6 (27-117)||(31220365-31220455)
chr6 (26-123)||(8324141-8324238)
chr6 (49-125)||(16437642-16437718)
chr6 (25-126)||(29964273-29964374)
chr6 (34-123)||(34780023-34780112)
chr6 (25-119)||(27127543-27127637)
chr6 (38-123)||(6507438-6507523)
chr6 (25-123)||(12226367-12226465)
chr6 (26-107)||(14232528-14232609)
chr6 (31-122)||(1947381-1947472)
chr6 (30-117)||(21186058-21186145)
chr6 (27-125)||(19645970-19646068)
chr6 (32-94)||(28014639-28014701)
chr6 (25-101)||(5029488-5029564)
chr6 (38-118)||(31490739-31490819)
[»] scaffold0002 (1 HSPs)
scaffold0002 (26-118)||(392169-392261)
[»] scaffold0062 (3 HSPs)
scaffold0062 (31-125)||(16813-16907)
scaffold0062 (31-125)||(26981-27075)
scaffold0062 (31-125)||(37147-37241)
[»] scaffold0144 (1 HSPs)
scaffold0144 (25-125)||(39562-39660)
[»] scaffold0809 (1 HSPs)
scaffold0809 (48-107)||(4705-4764)
[»] scaffold0169 (1 HSPs)
scaffold0169 (27-73)||(9046-9092)
[»] scaffold0050 (1 HSPs)
scaffold0050 (38-118)||(37428-37507)
[»] scaffold0161 (1 HSPs)
scaffold0161 (31-107)||(8773-8850)
[»] scaffold0034 (1 HSPs)
scaffold0034 (24-65)||(97809-97850)


Alignment Details
Target: chr8 (Bit Score: 245; Significance: 1e-136; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 17 - 316
Target Start/End: Complemental strand, 8018842 - 8018543
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaat-atactacttttggcttcctt 115  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||| ||||  ||||||||||||||||||||    
T  8018842 aaatataatattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatgttgttaaaactaatgcaaaacatactacttttggcttcctt 8018743  T
Q  116 aaccattgccagagatatggttagcaagaccctataaacaattaattgagctatagttaagagccatgtgaaactaaacccatcaattaccacaatactt 215  Q
    |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8018742 aaccattgccagggaaatggt-agcaagaccctataaacaattaattgagctatagttaagagccatgtgaaactaaacccatcaattaccacaatactt 8018644  T
Q  216 tattttctggatcatccaaggtatggcctcgtccttagtgtaatgctcttcaaaaggctgcacatatagaatgtataatcaacataaaacatcacccatt 315  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  8018643 tattttctggatcatccaaggtatggcctcatccttagtgtaatgctcttcaaaaggctgaacatatagaatgtataatcaacataaaacatcacccatt 8018544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 10694888 - 10694781
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||  |||||||||||||||||    
T  10694888 aaatatagtatttaaaaatggtaaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaatcaatgcaaatatgatacttttggcttcctta 10694789  T
Q  117 accattgc 124  Q
    ||||||||    
T  10694788 accattgc 10694781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 45338085 - 45337983
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||||||||||||||||| |||||||||||||||||||||| |||||||||| |||| |||||| |||| ||||||||||||| |||||||    
T  45338085 aaatataacattgaaaaatggtgaaaaatgataaatttaactttttaaaaatcaaaatgttattgagaccaatgcaaacatactacttttggtttcctta 45337986  T
Q  117 acc 119  Q
    |||    
T  45337985 acc 45337983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 21016085 - 21016185
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| ||||| |||| || ||||||||| ||||||||    
T  21016085 aaatataacattgaaaaatggttaaaagtgatagatttaactttttaaaagtcaaaatgttgttgaagccaatgcaaacatgctacttttgacttcctta 21016184  T
Q  117 a 117  Q
    |    
T  21016185 a 21016185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 6433625 - 6433518
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  ||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||| |||||||| |||| |||||||||||| ||||||||    
T  6433625 aaatatagcattgaaaaatggtaaaaagttataaatttaactttttaaaagttaaaatattgttaaaaccaatgcaaagatactacttttgtcttcctta 6433526  T
Q  117 accattgc 124  Q
    ||||||||    
T  6433525 accattgc 6433518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 19 - 125
Target Start/End: Complemental strand, 37433344 - 37433239
Alignment:
Q  19 atataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||| || |||||||||||||||||||| |||| |||||||||||  |||||||||     
T  37433344 atataacattgaaaaatgatgaaaagtgataaatttaactttttaaa-gttaaaatgttgttgaaaccaatgcaaacatactacttttaacttccttaat 37433246  T
Q  119 cattgcc 125  Q
    |||||||    
T  37433245 cattgcc 37433239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 6939239 - 6939162
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6939239 aaatataacattgaaaaatggtgacaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 6939162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 21016315 - 21016238
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||    
T  21016315 aaatataatattgaaaaatggtgaaaagtgatagatttaactttttaaaagtcaaaatgttgttgaagccaatgcaaa 21016238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 26195401 - 26195490
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactactttt 106  Q
    |||||||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| || ||||||||    
T  26195401 aaatataacattggaaaattgtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatacaaacatgctactttt 26195490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 19 - 116
Target Start/End: Original strand, 34713951 - 34714048
Alignment:
Q  19 atataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||| ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||| |||| || ||||||||| ||||||||    
T  34713951 atatagtattgaaaaatggtgcaaagtgataaatttcacttcttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgacttcctta 34714048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 214 - 316
Target Start/End: Complemental strand, 8028242 - 8028138
Alignment:
Q  214 tttattttctggatcatccaaggtatggcctcgtccttagtgtaatgctcttcaaaaggctgcacatatagaatg--tataatcaacataaaacatcacc 311  Q
    |||||||||| |||||||||||||||||| || ||||||  ||||||||||||| ||||||| ||||||||||||  ||||||||||||||| |||||||    
T  8028242 tttattttctagatcatccaaggtatggcttcatccttaacgtaatgctcttcataaggctgaacatatagaatgtatataatcaacataaatcatcacc 8028143  T
Q  312 cattc 316  Q
    |||||    
T  8028142 cattc 8028138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 3174541 - 3174436
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaat----gttgttgaaaccaatacaaatatactacttttggcttc 112  Q
    |||||| |||||| ||||||||||||| | |||||||| |||||||||||||||||||    |||||||||||||||||||| || ||||||||||||||    
T  3174541 aaatattatattggaaaatggtgaaaaattataaatttgactttttaaaagtcaaaataaatgttgttgaaaccaatacaaacatgctacttttggcttc 3174442  T
Q  113 cttaac 118  Q
    ||||||    
T  3174441 cttaac 3174436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 19389338 - 19389441
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| | ||||||| |||| |||| || |||||||||  |||||||    
T  19389338 aaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatatcgttgaaaacaatgcaaacatgctacttttgatttcctta 19389437  T
Q  117 acca 120  Q
    ||||    
T  19389438 acca 19389441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 25249369 - 25249446
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    |||||||  |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  25249369 aaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaa 25249446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 17 - 109
Target Start/End: Complemental strand, 18069043 - 18068951
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggc 109  Q
    |||||||  |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||| ||  ||||||||||    
T  18069043 aaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaggtcaaaatgttgttgaaactaatgcaaacattatacttttggc 18068951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 4990014 - 4989908
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| ||||| ||||||| ||||||||||||||||||||| ||||||||   |||||||||||| |||| || ||||||||| ||||||||    
T  4990014 aaatatagcattggaaaatagtgaaaaatgataaatttaactttttaaatgtcaaaat---gttgaaaccaatgcaaacatgctacttttgacttcctta 4989918  T
Q  117 accattgcca 126  Q
    ||||||||||    
T  4989917 accattgcca 4989908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 14855412 - 14855513
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| |||| |||||| |||||||| |||||||||||| |||||||||| ||||||||||| |||| ||| |||| || |||||||||| |||||||    
T  14855412 aaatatagtattaaaaaatagtgaaaagagataaatttaacattttaaaagttaaaatgttgttaaaactaatgcaaacatgctacttttggtttcctta 14855511  T
Q  117 ac 118  Q
    ||    
T  14855512 ac 14855513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 44874406 - 44874308
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||||||        ||||||||||||||| |||| || ||||||||| ||||||||    
T  44874406 aaatataacattgaaaaatggtgaaaagtgataaatttaaatttttaaaa--------gttgttgaaaccaatgcaaacatgctacttttgtcttcctta 44874315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 26892867 - 26892759
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||||||||||||||| || |||| |||||||||||||||||||||||| ||||| || ||||||| |||| ||| |||||| ||||| |||  ||     
T  26892867 aaatataatattgaaaaattgtaaaaaatgataaatttaactttttaaaagttaaaatattattgaaactaatataaacatactaattttgacttatttg 26892768  T
Q  117 accattgcc 125  Q
    |||||||||    
T  26892767 accattgcc 26892759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 11295500 - 11295598
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    |||||| ||||| |||||| |||| ||||||||||||||||||||||||   |||||||  ||||| |||||||||| |||||| ||||||||||||||    
T  11295500 tattgagaaatgatgaaaaatgatgaatttaactttttaaaagtcaaaacaatgttgaattcaatataaatatactaattttggtttccttaaccattg 11295598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 26672871 - 26672763
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||| | ||||  ||||||||||| ||||||||||||||||||||||||||||||||| ||| ||  || |||||  |||||||    
T  26672871 aaatatagcattggaaaatgataaaaaaggataaatttaattttttaaaagtcaaaatgttgttgaaaccaatataaacatcgtatttttgatttcctta 26672772  T
Q  117 accattgcc 125  Q
    |||||||||    
T  26672771 accattgcc 26672763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 5129484 - 5129590
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttga------aaccaatacaaatatactacttttggct 110  Q
    |||||||  ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| | |      ||||||||||||||| |||||||||  |    
T  5129484 aaatatagcattgaaaaatgatgaaaagtgataaatttaattttttaaaagtcaaaatgttgataaaatgttaaccaatacaaatatgctacttttgaat 5129583  T
Q  111 tccttaa 117  Q
    |||||||    
T  5129584 tccttaa 5129590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 25 - 112
Target Start/End: Original strand, 11332830 - 11332917
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttc 112  Q
    |||||| |||||||| |||||||  ||||||||||||||||||||||||  ||||||||  ||||| ||||||||||||| |||||||    
T  11332830 tattgagaaatggtgtaaagtgaagaatttaactttttaaaagtcaaaacattgttgaattcaatataaatatactacttctggcttc 11332917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 38 - 124
Target Start/End: Original strand, 33741523 - 33741609
Alignment:
Q  38 tgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    |||||| |||||||||||||||||||||||| ||||| |||||||||||||| |||||||  |||||||| ||  ||||| ||||||    
T  33741523 tgaaaaatgataaatttaactttttaaaagttaaaatattgttgaaaccaatgcaaatatgttacttttgactctcttaatcattgc 33741609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 118
Target Start/End: Complemental strand, 4308880 - 4308789
Alignment:
Q  27 ttgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    |||||||||||| |||| |||| ||||||||||| ||||||| |||||  ||||||| ||||||||||  ||||| |||||| |||||||||    
T  4308880 ttgaaaaatggtaaaaaatgatgaatttaactttataaaagttaaaatagtgttgaatccaatacaaacctactatttttggtttccttaac 4308789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 38870076 - 38869978
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    |||| |||||| ||||||||||  |||| ||| |||||||||||||||| ||| ||||  ||||  ||||||||||||||||| |||||| ||||||||    
T  38870076 attggaaaatgatgaaaagtgaagaattcaacattttaaaagtcaaaatattgatgaattcaatgtaaatatactacttttggtttccttgaccattgc 38869978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 6396315 - 6396391
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttg 107  Q
    ||||||||||| ||| || |||||||| ||||||| || |||||||||||||| | ||||||||||||||| |||||    
T  6396315 aaaatggtgaagagtaatgaatttaacattttaaacgttaaaatgttgttgaatctaatacaaatatactaattttg 6396391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 7532858 - 7532767
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    ||||| |||||||||||||||||| ||||||  |||||||||||   ||| |||||||| ||||| ||||  |||||||||||| |||||||||    
T  7532858 tattggaaaatggtgaaaagtgatgaatttaggtttttaaaagt--taatattgttgaatccaattcaaacctactacttttggtttccttaac 7532767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 32 - 118
Target Start/End: Original strand, 39972195 - 39972281
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    ||||||||||||||||| ||||| ||||||||||||| ||||  ||||| ||  |||| |||| |||||| |||||| |||||||||    
T  39972195 aaatggtgaaaagtgatgaatttgactttttaaaagttaaaaaattgttcaattcaatgcaaacatactatttttggtttccttaac 39972281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 20212433 - 20212518
Alignment:
Q  33 aatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    |||||||||||||||| ||||||| ||||||||||| ||||| | |||||| |||||  |||  | |||||||||| |||||||||    
T  20212433 aatggtgaaaagtgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaacctgctacttttggtttccttaac 20212518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 108
Target Start/End: Complemental strand, 24305014 - 24304932
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttgg 108  Q
    |||||||||| ||||||||||||  |||||||| |||||||  ||||||| ||||||||  ||||  |||||||||||||||||    
T  24305014 tattgaaaaacggtgaaaagtgaagaatttaac-ttttaaagatcaaaattttgttgaattcaatgtaaatatactacttttgg 24304932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 106
Target Start/End: Original strand, 37922972 - 37923046
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactactttt 106  Q
    |||||||| |||||| || |||||||||||||| |||||||||| || ||||| ||||| |||| |||||||||||    
T  37922972 aaaatggt-aaaagtaatgaatttaactttttagaagtcaaaatattattgaatccaatgcaaacatactactttt 37923046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 31596462 - 31596512
Alignment:
Q  30 aaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgtt 80  Q
    |||||||||||||| |||| ||||| ||||||||||||||||||| |||||    
T  31596462 aaaaatggtgaaaaatgatgaattttactttttaaaagtcaaaatattgtt 31596512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 106
Target Start/End: Complemental strand, 30351664 - 30351583
Alignment:
Q  26 attgaaaaatggtgaaaa-gtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactactttt 106  Q
    ||||||||||||| |||| ||||  | ||||||||||||||||| ||||| |||||||| ||||| |||| ||| |||||||    
T  30351664 attgaaaaatggtaaaaaagtgacgagtttaactttttaaaagttaaaatattgttgaatccaatgcaaacatattactttt 30351583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 35930217 - 35930168
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaa 66  Q
    ||||||| |||||||||||| |||||| | ||||||||||||||||||||    
T  35930217 aaatatagtattgaaaaatgatgaaaaataataaatttaactttttaaaa 35930168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 118
Target Start/End: Complemental strand, 5300263 - 5300203
Alignment:
Q  58 tttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    ||||||||||||||||| ||||||||  |||| ||||  |||||||||||| |||||||||    
T  5300263 tttttaaaagtcaaaatattgttgaattcaatgcaaacttactacttttggtttccttaac 5300203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 92
Target Start/End: Complemental strand, 41689126 - 41689095
Alignment:
Q  61 ttaaaagtcaaaatgttgttgaaaccaataca 92  Q
    ||||||||||||||||||||||||||||||||    
T  41689126 ttaaaagtcaaaatgttgttgaaaccaataca 41689095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 17319995 - 17320045
Alignment:
Q  30 aaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgtt 80  Q
    |||| |||||||||| ||| ||||||||||||||||||| ||||| |||||    
T  17319995 aaaagtggtgaaaagagatgaatttaactttttaaaagttaaaatattgtt 17320045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 35455316 - 35455250
Alignment:
Q  50 aatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| |||||||||||||||||  | ||||| |||||||||| |||||| |||||  |||||||    
T  35455316 aatttaattttttaaaagtcaaaataatattgaatccaatacaaacatactaattttgatttcctta 35455250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 29450926 - 29450975
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaa 66  Q
    |||||| |||||||||| |||| ||| |||||| ||||||||||||||||    
T  29450926 aaatattatattgaaaagtggtaaaatgtgatatatttaactttttaaaa 29450975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 35237006 - 35237046
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaa 66  Q
    ||||||||| |||||||||||||||||||| |||||||||||    
T  35237006 tattgaaaagtggtgaaaagtgataaattt-actttttaaaa 35237046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 118
Target Start/End: Complemental strand, 7444338 - 7444258
Alignment:
Q  38 tgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    ||||||||| | ||||| |  |||||||||| ||||| |||||||| | ||| ||||  |||||||||||| |||||||||    
T  7444338 tgaaaagtggtgaatttgatgttttaaaagttaaaatattgttgaatctaatgcaaacctactacttttggtttccttaac 7444258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 73
Target Start/End: Original strand, 39491855 - 39491891
Alignment:
Q  37 gtgaaaagtgataaatttaactttttaaaagtcaaaa 73  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  39491855 gtgaaaagtgatgaatttaactttttaaaagttaaaa 39491891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 93; Significance: 3e-45; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 36730181 - 36730289
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  36730181 aaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttcctta 36730280  T
Q  117 accattgcc 125  Q
    |||||||||    
T  36730281 accattgcc 36730289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 44570414 - 44570522
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| |||| || ||||||||||||||||||    
T  44570414 aaatataacattggaaaatggtgaaaagtgataactttaactttttaaaagtcaaaatgttgttgaaatcaatgcaaacatgctacttttggcttcctta 44570513  T
Q  117 accattgcc 125  Q
    |||||||||    
T  44570514 accattgcc 44570522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 51817340 - 51817448
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||| || ||||||||||||||||||    
T  51817340 aaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaactaatacaaacatgctacttttggcttcctta 51817439  T
Q  117 accattgcc 125  Q
    |||||||||    
T  51817440 accattgcc 51817448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 8715529 - 8715665
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||| |||||||||    
T  8715529 aaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttagcttcctta 8715628  T
Q  117 accattgc---cagag--atatggttagcaagaccct 148  Q
    |||||| |   |||||  |||||||||||||||||||    
T  8715629 accattacccacagagcaatatggttagcaagaccct 8715665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 9067416 - 9067552
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||| |||||||||    
T  9067416 aaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttagcttcctta 9067515  T
Q  117 accattgc---cagag--atatggttagcaagaccct 148  Q
    |||||| |   |||||  |||||||||||||||||||    
T  9067516 accattacccacagagcaatatggttagcaagaccct 9067552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 17 - 148
Target Start/End: Complemental strand, 52570863 - 52570730
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaa--atatactacttttggcttcct 114  Q
    ||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||  |||| ||||||||||| ||||    
T  52570863 aaatatagtattggaaaatggtgaaaagtgataaatataactttttaaaagtcaaaatattgttgaaaccaatgcaaacatatgctacttttggcatcct 52570764  T
Q  115 taaccattgccagagatatggttagcaagaccct 148  Q
    |||||||||  ||||  |||||||||||||||||    
T  52570763 taaccattgtgagagcaatggttagcaagaccct 52570730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 4759878 - 4759978
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||||    
T  4759878 aaatatagcattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttggcttcctta 4759977  T
Q  117 a 117  Q
    |    
T  4759978 a 4759978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 46317567 - 46317461
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||||||||    
T  46317567 aaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttggcttcctta 46317468  T
Q  117 accattg 123  Q
    |||||||    
T  46317467 accattg 46317461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 32415650 - 32415542
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||  ||||||||| |||||||    
T  32415650 aaatatagcattgaaaaattgtgaaaagtcataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttggtttcctta 32415551  T
Q  117 accattgcc 125  Q
    |||||||||    
T  32415550 accattgcc 32415542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 37509183 - 37509086
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    |||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||  |||||||| |||||||||||||||    
T  37509183 attggaaaatagtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaatatgttacttttgacttccttaaccattg 37509086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 10854940 - 10854834
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| ||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||| |||| || ||||||||||||||||||    
T  10854940 aaatatagcattggaaaatggtgaaaactaataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggcttcctta 10854841  T
Q  117 accattg 123  Q
    | |||||    
T  10854840 atcattg 10854834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 29915603 - 29915709
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| |||||||| |||| | |||||||||||||||||||||||||||||| |||||||||||| |||| || ||||||||||||||||||    
T  29915603 aaatatagtattggaaaatggtaaaaaattataaatttaactttttaaaagtcaaaatgtggttgaaaccaatgcaaacattctacttttggcttcctta 29915702  T
Q  117 accattg 123  Q
    | |||||    
T  29915703 atcattg 29915709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 29964756 - 29964862
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| |||||||| |||| | |||||||||||||||||||||||||||||| |||||||||||| |||| || ||||||||||||||||||    
T  29964756 aaatatagtattggaaaatggtaaaaaattataaatttaactttttaaaagtcaaaatgtggttgaaaccaatgcaaacattctacttttggcttcctta 29964855  T
Q  117 accattg 123  Q
    | |||||    
T  29964856 atcattg 29964862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 12905311 - 12905415
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||| || |||||||| |||||||||    
T  12905311 aaatataacattgaaaa-tggtgaaaaatgataaatttaacattttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctactttttgcttcctta 12905409  T
Q  117 accatt 122  Q
    | ||||    
T  12905410 atcatt 12905415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 12051119 - 12051011
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| |||||  |||||| |||||||||||||||||||||| | ||||||||||||||| |||| |||| || ||||||||||||||||||    
T  12051119 aaatatagtattgtaaaataatgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaaaacaatgcaaacatgctacttttggcttcctta 12051020  T
Q  117 accattgcc 125  Q
    |||||||||    
T  12051019 accattgcc 12051011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 35306413 - 35306305
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||||||||| |||||||| |||||| |||| |||| || |||||||||| |||||||    
T  35306413 aaatataacattggaaaatgatgaaaagtgataaatttaactttttaaaagttaaaatgttattgaaatcaatgcaaacatgctacttttggtttcctta 35306314  T
Q  117 accattgcc 125  Q
    | |||||||    
T  35306313 agcattgcc 35306305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 38 - 147
Target Start/End: Complemental strand, 31647364 - 31647253
Alignment:
Q  38 tgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc-cagaga-tatgg 135  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| |||| |||| || |||||||||||||||||||||||||| | ||||  ||||    
T  31647364 tgaaaaatgataaatttaactttttaaaagtcaaaatgttattgaaatcaatgcaaacatgctacttttggcttccttaaccattgctctgagacaatgg 31647265  T
Q  136 ttagcaagaccc 147  Q
    ||||||||||||    
T  31647264 ttagcaagaccc 31647253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 20227408 - 20227514
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  ||||||||||| |||||||||||||||||||||| |||||||| |||||||| |||||||||||||||| ||  |||||||| ||||||||    
T  20227408 aaatatagcattgaaaaatgatgaaaagtgataaatttaacttcttaaaagttaaaatgttattgaaaccaatacaaacatgttacttttgacttcctta 20227507  T
Q  117 accattg 123  Q
    | |||||    
T  20227508 atcattg 20227514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 8847480 - 8847589
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| |||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||| ||||  ||| || |||||||||| |||||||    
T  8847480 aaatataacattggaaaatggtaaaaagtgattaatttaactttttaaaagttaaaatattgttgaaaacaatgtaaacatgctacttttggtttcctta 8847579  T
Q  117 accattgcca 126  Q
    ||||||||||    
T  8847580 accattgcca 8847589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 114
Target Start/End: Original strand, 44695699 - 44695796
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcct 114  Q
    ||||||||| ||| ||||||||||||| |||||||||||||||||||||| | ||||||||||||||| |||| |||| ||  |||||||||||||||    
T  44695699 aaatataatcttggaaaatggtgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaaatcaatgcaaacatgttacttttggcttcct 44695796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 25102350 - 25102457
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||||| |||||||||||||| || ||||| ||||| ||||| |||||||||||||| ||||||| |||||||||| |||||||    
T  25102350 aaatatagcattggaaaatggtaaaaagtgataaatt-aatttttttaaagttaaaatattgttgaaaccaatgcaaatatgctacttttggtttcctta 25102448  T
Q  117 accattgcc 125  Q
    || ||||||    
T  25102449 actattgcc 25102457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 34060802 - 34060883
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactactttt 106  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||  |||| |||| | |||||||||    
T  34060802 tattgaaaaatggtgaaaagtgatgaatttaactttttaaaagttaaaatattgttgaattcaatgcaaacaaactactttt 34060883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 94
Target Start/End: Complemental strand, 41346048 - 41345979
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    ||||||||||| ||||||||| |||||||||| ||||||||||| ||||| |||||||||||||| ||||    
T  41346048 tattgaaaaatagtgaaaagtaataaatttaattttttaaaagttaaaatattgttgaaaccaatgcaaa 41345979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 45899571 - 45899672
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaa-gtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctt 115  Q
    |||||| |||||| |||||| |||||| ||||| ||||||| ||||||||||||||||| ||||||||  ||||  ||| ||||||||||||| ||||||    
T  45899571 aaatattatattggaaaatgatgaaaaagtgatgaatttaaatttttaaaagtcaaaatattgttgaattcaatgtaaacatactacttttggtttcctt 45899670  T
Q  116 aa 117  Q
    ||    
T  45899671 aa 45899672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 51256137 - 51256205
Alignment:
Q  53 ttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccat 121  Q
    |||||||||||||||||||||  ||||||||  ||||| |||||||| |||||||| ||||||||||||    
T  51256137 ttaactttttaaaagtcaaaacattgttgaattcaatataaatataccacttttggtttccttaaccat 51256205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 11317033 - 11316946
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    ||||||||||||||| || ||||||||||||||||||||||||| || ||||| | ||| ||||  ||||  |||||| |||||||||    
T  11317033 aaaatggtgaaaagttatgaatttaactttttaaaagtcaaaatattattgaatctaatgcaaaattactctttttgggttccttaac 11316946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 80
Target Start/End: Original strand, 49976185 - 49976232
Alignment:
Q  33 aatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgtt 80  Q
    |||||||||||||||| ||||||||||||||||||||||||| |||||    
T  49976185 aatggtgaaaagtgatgaatttaactttttaaaagtcaaaatattgtt 49976232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 103
Target Start/End: Original strand, 34750294 - 34750371
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactact 103  Q
    |||| ||| |||||||||||||| |||||||||||||| || | ||||| |||||||| ||||||||||  |||||||    
T  34750294 attggaaactggtgaaaagtgatgaatttaactttttataaattaaaatattgttgaatccaatacaaacctactact 34750371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 41998953 - 41998901
Alignment:
Q  27 ttgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgt 79  Q
    |||||||||||||||||||| |||||| |||||| ||||||| ||||||||||    
T  41998953 ttgaaaaatggtgaaaagtgttaaattcaactttataaaagtaaaaatgttgt 41998901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 83
Target Start/End: Complemental strand, 21324582 - 21324531
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    ||||| |||||||||||| |||||||||||||||||| ||||| ||||||||    
T  21324582 aaatgatgaaaagtgatagatttaactttttaaaagttaaaatattgttgaa 21324531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 11675384 - 11675293
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    |||||||||||||| |||  |||  |||||||||||||||| |||||||| |||||||| ||||| | ||  ||| |||||||| |||||||||    
T  11675384 tattgaaaaatggtaaaa--tgacgaatttaactttttaaatgtcaaaatattgttgaatccaatgctaacctaccacttttggtttccttaac 11675293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 18834 - 18887
Alignment:
Q  36 ggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaat 89  Q
    ||||||||||||| ||||||||||||||||| | ||||| |||||||| |||||    
T  18834 ggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaatccaat 18887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 18975 - 19028
Alignment:
Q  36 ggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaat 89  Q
    ||||||||||||| ||||||||||||||||| | ||||| |||||||| |||||    
T  18975 ggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaatccaat 19028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 24 - 73
Target Start/End: Original strand, 29213395 - 29213444
Alignment:
Q  24 atattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 73  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||| ||||    
T  29213395 atattgaaaaatggtgaaaaatgatagatttgactttttaaaagttaaaa 29213444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 90
Target Start/End: Original strand, 39974848 - 39974907
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaata 90  Q
    |||||| ||| ||||||| ||||||||||||||||||| |||||  ||||||| ||||||    
T  39974848 aaaatgatgagaagtgatgaatttaactttttaaaagttaaaatagtgttgaatccaata 39974907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 67
Target Start/End: Complemental strand, 1803969 - 1803919
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaag 67  Q
    ||||||| |||||||||| ||| |||| |||||||||||||||| ||||||    
T  1803969 aaatatattattgaaaaagggtaaaaaatgataaatttaactttgtaaaag 1803919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 125
Target Start/End: Original strand, 45503367 - 45503441
Alignment:
Q  51 atttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    |||| ||||||||||||| ||||  ||||||||  |||||||||| | ||  |||||| ||||||||||||||||    
T  45503367 atttgactttttaaaagttaaaaaattgttgaattcaatacaaattttcttattttggtttccttaaccattgcc 45503441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 66
Target Start/End: Complemental strand, 4298406 - 4298369
Alignment:
Q  29 gaaaaatggtgaaaagtgataaatttaactttttaaaa 66  Q
    ||||||||||||||||||||| |||| |||||||||||    
T  4298406 gaaaaatggtgaaaagtgatagatttgactttttaaaa 4298369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 63
Target Start/End: Original strand, 13647073 - 13647110
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaacttttta 63  Q
    |||||||||| |||||||||||| ||||||||||||||    
T  13647073 attgaaaaatagtgaaaagtgatgaatttaacttttta 13647110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 26850522 - 26850579
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaat 74  Q
    |||||| |||||  |||||||| ||||||||| ||||||| ||||||||||| |||||    
T  26850522 aaatattatattagaaaatggtaaaaagtgatgaatttaattttttaaaagttaaaat 26850579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Complemental strand, 32070720 - 32070679
Alignment:
Q  27 ttgaaaaatggtgaaaagtgataaatttaactttttaaaagt 68  Q
    ||||||| |||||||||||||| |||| ||||||||||||||    
T  32070720 ttgaaaagtggtgaaaagtgatgaattcaactttttaaaagt 32070679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 70
Target Start/End: Complemental strand, 39436538 - 39436493
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtca 70  Q
    ||||||||||||||||||| | |  |||||||||||||||||||||    
T  39436538 tattgaaaaatggtgaaaaataaagaatttaactttttaaaagtca 39436493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 39401563 - 39401690
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||    
T  39401563 aaatataacattgaaaaatggtgaaaagtgataa-tttaactttttaaaagtcaaaattttgttgaaaccaatacaaacatgctacttttggcttcctta 39401661  T
Q  117 accattgccagagatatggttagcaagaccct 148  Q
    ||||||||| ||   |||||||||||||||||    
T  39401662 accattgcccga---atggttagcaagaccct 39401690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 2966621 - 2966513
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| |||||||||    
T  2966621 aaatataacattggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttagcttcctta 2966522  T
Q  117 accattgcc 125  Q
    |||||||||    
T  2966521 accattgcc 2966513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 6999283 - 6999175
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  6999283 aaatatagtattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttcctta 6999184  T
Q  117 accattgcc 125  Q
    |||||||||    
T  6999183 accattgcc 6999175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 17056098 - 17056193
Alignment:
Q  30 aaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  17056098 aaaaatggtgaaaagtgataaatttaactttttaaaagacaaaatgttgttgaaaccaatgcaaatatgctatttttggcttccttaaccattgcc 17056193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 17068545 - 17068640
Alignment:
Q  30 aaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||    
T  17068545 aaaaatggtgaaaagtgataaatttaactttttaaaagacaaaatgttgttgaaaccaatgcaaatatgctatttttggcttccttaaccattgcc 17068640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 862670 - 862562
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||| || ||||||||||||||||||    
T  862670 aaatatagtattggaaaatggtgaaaagtgataaatttaactttttaagagtcaaaatcttgttgaaaccaatgcaaacatgctacttttggcttcctta 862571  T
Q  117 accattgcc 125  Q
    | |||||||    
T  862570 atcattgcc 862562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 27495204 - 27495096
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||  ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |||| |||||||||||| ||||||||    
T  27495204 aaatataacattagaaaatggtgaaaagtgataaatttaacattttaaaaatcaaaatgttgttgaaaccaatgcaaacatactacttttgacttcctta 27495105  T
Q  117 accattgcc 125  Q
    |||||||||    
T  27495104 accattgcc 27495096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 41436559 - 41436451
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||| || ||||||||| |||| |||    
T  41436559 aaatatagtattgaaaaatgatgaaaagtgataaacttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgacttcatta 41436460  T
Q  117 accattgcc 125  Q
    |||||||||    
T  41436459 accattgcc 41436451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 17074528 - 17074623
Alignment:
Q  30 aaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| ||| |||||||||||||||||||||||    
T  17074528 aaaaatggtgaaaagtgataaatttaactttttaaaagacaaaatgttgttgaaactaatgcaaatatgctatttttggcttccttaaccattgcc 17074623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 30 - 125
Target Start/End: Original strand, 17095107 - 17095202
Alignment:
Q  30 aaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||  ||||||||||||||||    
T  17095107 aaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctatttttgcattccttaaccattgcc 17095202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 17 - 121
Target Start/End: Original strand, 35445318 - 35445423
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaacttttt-aaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctt 115  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| || ||||||||| ||| |||    
T  35445318 aaatataacattgaaaaatggtgaaaagtgataaatttaactttttcaaaagtcaaaatattgttgaaaccaatacaaacatgctacttttgacttgctt 35445417  T
Q  116 aaccat 121  Q
    ||||||    
T  35445418 aaccat 35445423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 18 - 125
Target Start/End: Original strand, 9201524 - 9201630
Alignment:
Q  18 aatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaa 117  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||  |||||||| |||| ||||    
T  9201524 aatataatattaaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttg-aaccaatacaaacatgttacttttgacttctttaa 9201622  T
Q  118 ccattgcc 125  Q
    | ||||||    
T  9201623 ctattgcc 9201630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 126
Target Start/End: Original strand, 23685686 - 23685789
Alignment:
Q  23 aatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccatt 122  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||| |||| ||  |||||||||||||||||| ||||    
T  23685686 aatattggaaaatggggaaaagtgataaatttaactttttaaaagtcaaaatgttattgaaatcaatgcaaacatgttacttttggcttccttaaacatt 23685785  T
Q  123 gcca 126  Q
    ||||    
T  23685786 gcca 23685789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 39085820 - 39085927
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| |||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||| |||| || || |||||| ||||||||    
T  39085820 aaatataacattggaaaatgataaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaatcaatgcaaacatgctgcttttgacttcctta 39085919  T
Q  117 accattgc 124  Q
    ||||||||    
T  39085920 accattgc 39085927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 44299721 - 44299815
Alignment:
Q  29 gaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    ||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||  ||  |||||| |||||||||||||||||||||    
T  44299721 gaaaaatggtgaaaagtgataaatttaacattttaaaagtcaaaatattgttgaaaccaatgtaagcatactatttttggcttccttaaccattg 44299815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 16361647 - 16361539
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| |||||||| |||| |||||||||||||||| |||||||||||||||||| ||||||||| |||| ||  |||||||||||||||||    
T  16361647 aaatataacattggaaaatggtaaaaattgataaatttaactttataaaagtcaaaatgttgtcgaaaccaatgcaaacatgttacttttggcttcctta 16361548  T
Q  117 accattgcc 125  Q
    | |||||||    
T  16361547 atcattgcc 16361539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 17118401 - 17118506
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||||| || |||||| |||||| |||||||||||||||||||||| ||||| |||||||||||||||| |||||||  || ||||||||||||||    
T  17118401 aaatataatactggaaaatgttgaaaaatgataaatttaactttttaaaactcaaa-tgttgttgaaaccaatgcaaatatgttatttttggcttcctta 17118499  T
Q  117 accattg 123  Q
    |||||||    
T  17118500 accattg 17118506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 765178 - 765255
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  765178 aaatataacattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 765255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 33726461 - 33726355
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||||||||||||||||| | |||||||||||||| ||||||| ||||| ||||||||| ||||||||| || ||| |||||  |||||||    
T  33726461 aaatatagtattgaaaaatggtgaaaaataataaatttaactttctaaaagttaaaatattgttgaaatcaatacaaacatgctatttttgatttcctta 33726362  T
Q  117 accattg 123  Q
    |||||||    
T  33726361 accattg 33726355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 2239652 - 2239572
Alignment:
Q  28 tgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttgg 108  Q
    ||||||||||| |||| |||| ||||||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||    
T  2239652 tgaaaaatggtaaaaaatgatgaatttaactttttaaaagttaaaatattgttgaatccaatacaaatatactacttttgg 2239572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 15004987 - 15004905
Alignment:
Q  38 tgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaacca 120  Q
    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||  |||||||| |||| |||||||    
T  15004987 tgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaatacaaacatgatacttttgacttctttaacca 15004905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 44173200 - 44173099
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  ||||||||||| |||||| |||||||||||| ||||||||| | ||||||||||||||||||||||||| ||| || |||||||||| |||    
T  44173200 aaatatagcattgaaaaatgatgaaaaatgataaatttaattttttaaaaattaaaatgttgttgaaaccaatacaaacatatta-ttttggcttcttta 44173102  T
Q  117 acc 119  Q
    |||    
T  44173101 acc 44173099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 123
Target Start/End: Complemental strand, 33864427 - 33864331
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    |||| ||||||||||||||| ||||||||||| |||||||||||||||| |||||||||||||| |||||||  ||| || | |||||||||||||||    
T  33864427 attggaaaatggtgaaaagtaataaatttaacattttaaaagtcaaaatattgttgaaaccaatgcaaatatgttac-ttcgacttccttaaccattg 33864331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 11659335 - 11659235
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    ||||||||||| |||||||||||  ||||||||||||||||| | ||||| ||||||||  ||||  ||||||||| ||||||| |||||||||||||||    
T  11659335 tattgaaaaatagtgaaaagtgaagaatttaactttttaaaaattaaaatattgttgaattcaatgtaaatatactgcttttggtttccttaaccattgc 11659236  T
Q  125 c 125  Q
    |    
T  11659235 c 11659235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 11445379 - 11445454
Alignment:
Q  49 aaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||| ||  ||||||||| |||||||||||||||    
T  11445379 aaatttaactttttaaatgtcaaaatgttgttgaaaccaatgcaaacatgttacttttggtttccttaaccattgc 11445454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 464877 - 464770
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaag-tgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctt 115  Q
    |||||||| ||||||||||||| ||||  |||||| ||||||||||||||||| |||||||| |||||| ||||||||| ||  |||||||  |||||||    
T  464877 aaatataacattgaaaaatggtaaaaaaatgataattttaactttttaaaagttaaaatgttattgaaatcaatacaaacatgttacttttaacttcctt 464778  T
Q  116 aaccattg 123  Q
    || |||||    
T  464777 aatcattg 464770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 1321249 - 1321147
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| |||||||| |||| | |||||||||||| ||||||| ||||||||||||||||| ||||  ||| || |||  |||||||||||||    
T  1321249 aaatataacattggaaaatggtaaaaaataataaatttaactctttaaaaatcaaaatgttgttgaaatcaatgtaaacatgctaactttggcttcctta 1321150  T
Q  117 acc 119  Q
    |||    
T  1321149 acc 1321147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 13997932 - 13998009
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    |||||||  |||||||||| ||||||| |||||||||||||||||||||| | ||||| ||||||||| |||||||||    
T  13997932 aaatatagcattgaaaaattgtgaaaaatgataaatttaactttttaaaaattaaaatattgttgaaatcaatacaaa 13998009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 17603892 - 17603815
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    |||||||  ||||||||||| | |||| ||||||||||||||||||||||||||||||||| |||||| |||| ||||    
T  17603892 aaatatagcattgaaaaatgataaaaaatgataaatttaactttttaaaagtcaaaatgttattgaaatcaatgcaaa 17603815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 3454726 - 3454815
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttg 107  Q
    |||||| ||||| ||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||||||  |||||||||  |||||||||||    
T  3454726 aaatattatattaaaagatggtaaaaagtgataactttaactttttaaaagt-aaaatattgttgaattcaatacaaaattactacttttg 3454815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 24 - 125
Target Start/End: Complemental strand, 33849060 - 33848959
Alignment:
Q  24 atattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    ||||||| ||||||||||||   |  |||||||||||||||||||||||   ||||||||   |||| ||||||| ||||||||| ||||||||||||||    
T  33849060 atattgataaatggtgaaaaaccaagaatttaactttttaaaagtcaaaccattgttgaatttaatataaatatattacttttggtttccttaaccattg 33848961  T
Q  124 cc 125  Q
    ||    
T  33848960 cc 33848959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 106
Target Start/End: Complemental strand, 2805456 - 2805373
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaacttttt--aaaagtcaaaatgttgttgaaaccaatacaaatatactactttt 106  Q
    |||||||||||  | ||||||||| |||||||||||||  |||||||||||| |||||||| | |||||||| |||||||||||    
T  2805456 tattgaaaaataattaaaagtgatgaatttaactttttttaaaagtcaaaatattgttgaatctaatacaaacatactactttt 2805373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 62
Target Start/End: Original strand, 11445319 - 11445364
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaacttttt 62  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||    
T  11445319 aaatataacattgaaaaatggtgaaaaatgataaatttaacttttt 11445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 37230293 - 37230253
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaa 65  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  37230293 tattgaaaaatggtgaaaagtgataaacttaactttttaaa 37230253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 85
Target Start/End: Original strand, 43140351 - 43140419
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaac 85  Q
    |||||||| |||||||||||  ||||| |||||||||||||||||||||| | ||||| || |||||||    
T  43140351 aaatataacattgaaaaatgacgaaaaatgataaatttaactttttaaaattaaaaatattattgaaac 43140419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 747527 - 747585
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||| ||||  ||||||||    
T  747527 tattggaaaatagtgaaaagtgatagatttaactttttaaaagttaaaaaattgttgaa 747585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 74
Target Start/End: Original strand, 9965090 - 9965140
Alignment:
Q  24 atattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaat 74  Q
    ||||||| |||||||||||| | || |||||||||||||||||||||||||    
T  9965090 atattgagaaatggtgaaaaattatgaatttaactttttaaaagtcaaaat 9965140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 12695286 - 12695373
Alignment:
Q  37 gtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    ||||||||| |  ||||||||||||||||| ||||||  ||||||||  ||||  |||||||||| |||| | ||||||||||||||||    
T  12695286 gtgaaaagtaaagaatttaactttttaaaaatcaaaacattgttgaattcaatgtaaatatacta-tttttgtttccttaaccattgcc 12695373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 83
Target Start/End: Original strand, 34220692 - 34220740
Alignment:
Q  35 tggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    |||||||||||||| ||||||| ||||||||||| ||||| ||||||||    
T  34220692 tggtgaaaagtgatgaatttaagtttttaaaagttaaaatattgttgaa 34220740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 34392589 - 34392677
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    |||| |||||||| |||| |||  ||||||| ||||||||||||||||    ||||||  ||||  ||||||||||||||||| |||||||||    
T  34392589 attggaaaatggttaaaaatgaagaatttaattttttaaaagtcaaaa----gttgaattcaatgtaaatatactacttttggtttccttaac 34392677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 34512713 - 34512650
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    ||||||||||||||||||| |||| ||||||||||||| ||||  ||||| ||  |||||||||    
T  34512713 aaaatggtgaaaagtgatagatttgactttttaaaagttaaaaaattgttaaattcaatacaaa 34512650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 10900278 - 10900368
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttg 107  Q
    |||||| | ||||||||||| | ||||||||| ||||| | ||||||||||| ||||| || |||||  ||||  |||||||||| |||||    
T  10900278 aaatatcacattgaaaaatgataaaaagtgatgaattttattttttaaaagttaaaatattattgaattcaatgtaaatatactatttttg 10900368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 123
Target Start/End: Original strand, 16242002 - 16242084
Alignment:
Q  41 aaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    |||||||  ||||||||||||||||||||||||  || |||||  | | | ||||||||||||||| | ||| ||||||||||    
T  16242002 aaagtgaagaatttaactttttaaaagtcaaaacattattgaattccacataaatatactacttttagtttctttaaccattg 16242084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 60 - 118
Target Start/End: Original strand, 41890182 - 41890240
Alignment:
Q  60 tttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    ||||||||| ||||| |||||||| ||||| ||||  |||||||||||| |||||||||    
T  41890182 tttaaaagttaaaatattgttgaatccaatgcaaacctactacttttggtttccttaac 41890240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 125
Target Start/End: Complemental strand, 19851726 - 19851645
Alignment:
Q  44 gtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    |||||| |||| ||||||||||||| ||||  ||||||||  |||||||||  | ||  |||||| ||||||||||||||||    
T  19851726 gtgatagatttgactttttaaaagttaaaaaattgttgaattcaatacaaactttcttgttttggtttccttaaccattgcc 19851645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 5671602 - 5671554
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 73  Q
    |||||| |||||||||||||||||| |||| |||||| |||||| ||||    
T  5671602 tattgagaaatggtgaaaagtgatagatttgacttttaaaaagttaaaa 5671554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 7888594 - 7888646
Alignment:
Q  27 ttgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgt 79  Q
    |||||||||||||||||||| | ||||||| ||| ||||||| |||| |||||    
T  7888594 ttgaaaaatggtgaaaagtgttgaatttaattttataaaagtaaaaaagttgt 7888646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 74
Target Start/End: Complemental strand, 8327040 - 8327004
Alignment:
Q  38 tgaaaagtgataaatttaactttttaaaagtcaaaat 74  Q
    |||||||||| |||||||||||||||||||| |||||    
T  8327040 tgaaaagtgaaaaatttaactttttaaaagttaaaat 8327004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 29260170 - 29260222
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    ||||||||||||||||||| |||| |||||| |||||| ||||  ||||||||    
T  29260170 aaaatggtgaaaagtgatagatttgacttttaaaaagttaaaaaattgttgaa 29260222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 40798372 - 40798448
Alignment:
Q  38 tgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcct 114  Q
    ||||||||||   |||||||||||||||||||||||  ||||||||  ||||  || ||||| |||||||| |||||    
T  40798372 tgaaaagtgaaggatttaactttttaaaagtcaaaacattgttgaattcaatgtaagtataccacttttggtttcct 40798448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 1e-41; HSPs: 55)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 5240360 - 5240466
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| || ||||||||||||||||||    
T  5240360 aaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttattgaaaccaatgcaaacatgctacttttggcttcctta 5240459  T
Q  117 accattg 123  Q
    |||||||    
T  5240460 accattg 5240466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 8380522 - 8380414
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| |||||||||||||||||||||    
T  8380522 aaatatagcattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgaaaacatactacttttggcttcctta 8380423  T
Q  117 accattgcc 125  Q
    |||||||||    
T  8380422 accattgcc 8380414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 29034768 - 29034660
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || ||||||||||||| ||||    
T  29034768 aaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaactaatgcaaacatgctacttttggctttctta 29034669  T
Q  117 accattgcc 125  Q
    |||||||||    
T  29034668 accattgcc 29034660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 7322981 - 7323088
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||||  |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| || ||||||||| |||| |||    
T  7322981 aaatataaccttgaaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgacttcttta 7323080  T
Q  117 accattgc 124  Q
    ||||||||    
T  7323081 accattgc 7323088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 40763330 - 40763241
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactactttt 106  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||||||    
T  40763330 aaatataacattgaaaaatggtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaatatgctactttt 40763241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 42222294 - 42222194
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||  ||||||| | |||||||||||||||    
T  42222294 tattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatacaaacatgttacttttagtttccttaaccattgc 42222195  T
Q  125 c 125  Q
    |    
T  42222194 c 42222194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 40066945 - 40067045
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||| ||||||||||||| |||||||||||| ||||||||    
T  40066945 aaatataatattgaaaaatggtgaaaaatgataaatttaactttttaaaaat-aaaatgttgttaaaaccaatacaaa-atactacttttgccttcctta 40067042  T
Q  117 acc 119  Q
    |||    
T  40067043 acc 40067045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 41188814 - 41188920
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||| |||| ||||||| |||||||||||||    
T  41188814 aaatatagcattggaaaatggtgaaaggtgataaatttaactttttaaaagtcaaaatgctgttgaaatcaatgcaaacatactacatttggcttcctta 41188913  T
Q  117 accattg 123  Q
    |||||||    
T  41188914 accattg 41188920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 27053535 - 27053624
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaacca 120  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| || |||||||||| |||||||||||    
T  27053535 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacattctacttttggtttccttaacca 27053624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 49069636 - 49069531
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||| |||| || ||||||||||||||||||| ||  ||||||||| |||||||    
T  49069636 aaatatagtattgaaaaatggtgaaaagtgataaatctaactttttaaaaatcaatatattgttgaaaccaatacaaacatgttacttttggtttcctta 49069537  T
Q  117 accatt 122  Q
    ||||||    
T  49069536 accatt 49069531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 25 - 129
Target Start/End: Original strand, 30388696 - 30388800
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| || |||||| ||||| ||| |||||||||||| |||| ||||||||| |    
T  30388696 tattgaaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatattattgaaatcaatataaacatactacttttgacttctttaaccattac 30388795  T
Q  125 cagag 129  Q
    |||||    
T  30388796 cagag 30388800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 29687543 - 29687457
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaa 117  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| || |||||||||||||||||||    
T  29687543 aaaatggtgaaaagtgatgaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaa 29687457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 23 - 112
Target Start/End: Original strand, 8258672 - 8258761
Alignment:
Q  23 aatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttc 112  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||| |||| |||||||||||| ||||    
T  8258672 aatattgaaaaatggtgaaaagtgataaatttaactttttaatagtcataattttgttgaaaccaatgcaaacatactacttttgccttc 8258761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 31 - 120
Target Start/End: Original strand, 24359750 - 24359839
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaacca 120  Q
    |||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||| |||| || ||||||||||||||||||||||    
T  24359750 aaaatggtaaaaagggataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaacca 24359839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 8292826 - 8292718
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| ||||||||||||||| ||||||||  |||||||||||||||||||||||||||| |||| |||| || ||||||||| ||||||||    
T  8292826 aaatatagcattggaaaatggtgaaaagttataaatttgcctttttaaaagtcaaaatgttgttgaaatcaatccaaacatgctacttttgacttcctta 8292727  T
Q  117 accattgcc 125  Q
    |||||||||    
T  8292726 accattgcc 8292718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 5348000 - 5348097
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||||||||||||||   ||||||||||||| |||| || ||||||||||||||||||    
T  5348000 aaatataacattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaa---tgttgaaaccaatgcaaacatgctacttttggcttcctta 5348096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 22521667 - 22521561
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||| ||| |||||||||||||||||| ||||||||||||||||||||||||||||| |||| || ||||||||| ||| ||||    
T  22521667 aaatatagcattggaaaatgatgagaagtgataaatttaacttcttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgactttctta 22521568  T
Q  117 accattg 123  Q
    |||||||    
T  22521567 accattg 22521561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 20 - 94
Target Start/End: Original strand, 43567537 - 43567611
Alignment:
Q  20 tataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  43567537 tatagtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaa 43567611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 31626069 - 31626146
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||    
T  31626069 aaatataatattaaaaaatgatgaaaagtgataaatttaactttttaaaaatcaaaatgttgttgaaaccaatgcaaa 31626146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 1910325 - 1910217
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||  ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| |||  ||| || ||||||||| |||| |||    
T  1910325 aaatataacattagaaaatggtgaaaaatgataaatttaactttttaaaagttaaaatgttgttgaaacaaatgtaaacatgctacttttgacttcttta 1910226  T
Q  117 accattgcc 125  Q
    |||||||||    
T  1910225 accattgcc 1910217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 46478584 - 46478689
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||||||||| ||||||| |||||||||||||||||||||||| ||||| |||||||||| ||| |||||||  ||||||||||||| |||    
T  46478584 aaatatatcattgaaaaatagtgaaaa-tgataaatttaactttttaaaagttaaaatattgttgaaactaatgcaaatatgttacttttggcttcgtta 46478682  T
Q  117 accattg 123  Q
    |||||||    
T  46478683 accattg 46478689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 3681775 - 3681703
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaat 89  Q
    ||||| || |||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  3681775 aaatacaacattggaaaatggtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaat 3681703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 106
Target Start/End: Complemental strand, 40194907 - 40194818
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactactttt 106  Q
    ||||||| ||||  ||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| || ||||||||    
T  40194907 aaatatagtattataaattgatgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctactttt 40194818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 36279200 - 36279073
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||||||||||||||||||||||||||||||||| |||||||   |||||||  ||| |||| || ||||||||| ||| ||||    
T  36279200 aaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaat---gttgaaattaatgcaaacatgctacttttgcctttctta 36279104  T
Q  117 accattgccagagatatggttagcaagaccc 147  Q
    ||||||||| | |  ||||||| ||||||||    
T  36279103 accattgcccgggcaatggttaacaagaccc 36279073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 101
Target Start/End: Complemental strand, 46042828 - 46042745
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatacta 101  Q
    ||||||| ||||||||| ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||| |||| ||||||    
T  46042828 aaatatagtattgaaaa-tggtgaaaagttataaatttaacttttttaaagtctaaatgttgttgaaaccaatgcaaacatacta 46042745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 10575802 - 10575895
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    |||||||||||||||| |||||||||||||||||| || |||| ||||||||  ||||  ||||||||||||||||  ||| ||||||||||||    
T  10575802 aaatggtgaaaagtgaaaaatttaactttttaaaactccaaatattgttgaattcaatgaaaatatactacttttgatttctttaaccattgcc 10575895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 74
Target Start/End: Original strand, 48454850 - 48454907
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaat 74  Q
    |||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||    
T  48454850 aaatataacattgggaaatggtgaaaagtgataaatttaactttttaaaagtcaaaat 48454907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 31 - 118
Target Start/End: Original strand, 16082474 - 16082561
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    ||||||||||||| |||| |||||||| |||||||||| ||  | |||||||| ||||| |||| ||||||||||||| |||||||||    
T  16082474 aaaatggtgaaaattgatgaatttaacgttttaaaagttaagttattgttgaatccaatgcaaacatactacttttggattccttaac 16082561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 4686079 - 4686172
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||   |||||||  ||| |||||  |||||||| ||  |||||||||    
T  4686079 tattgaaaaatggtgaaaagtgattaatttaactttttaaaagttaaaaaagtgttgaattcaagacaaacttactacttatgatttccttaac 4686172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 32204254 - 32204162
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    ||||||||||| ||||||||||| ||||||||||||||||||| ||||| || |||||  |||| ||||| |||||  ||||  |||||||||    
T  32204254 attgaaaaatgatgaaaagtgatgaatttaactttttaaaagttaaaatatttttgaatacaatgcaaatttactatctttgatttccttaac 32204162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 16931949 - 16931867
Alignment:
Q  40 aaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccatt 122  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||   |||  |||||||||| |||||| || ||||||||||    
T  16931949 aaaagtgaataatttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatactatttttggttttcttaaccatt 16931867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 16937332 - 16937250
Alignment:
Q  40 aaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccatt 122  Q
    ||||||||  ||||||||||||||||||||||||| ||||||||   |||  |||||||||| |||||| || ||||||||||    
T  16937332 aaaagtgaataatttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatactatttttggttttcttaaccatt 16937250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 126
Target Start/End: Complemental strand, 16957711 - 16957638
Alignment:
Q  52 tttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcca 126  Q
    ||||||||||||||||||||||| ||||||||   |||  ||||||| ||||||||| |||||||||||||||||    
T  16957711 tttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatattacttttgg-ttccttaaccattgcca 16957638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 22707130 - 22707053
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    |||||||  |||| |||||  |||||| |||||||||| ||||||||||||| || ||||||||||||||||| ||||    
T  22707130 aaatatagcattggaaaataatgaaaaatgataaattttactttttaaaagttaacatgttgttgaaaccaatgcaaa 22707053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Original strand, 30538508 - 30538569
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttg 78  Q
    ||||||| ||||  ||||| ||||||| |||||||||||||||||||||| |||||||||||    
T  30538508 aaatatagtattagaaaatagtgaaaaatgataaatttaactttttaaaaatcaaaatgttg 30538569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 43958111 - 43958188
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    ||||||| ||||  ||||| ||||||| |||||||||||| ||||||||||||||||| ||  |||||||||| ||||    
T  43958111 aaatatagtattagaaaattgtgaaaaatgataaatttaattttttaaaagtcaaaatattactgaaaccaatgcaaa 43958188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 118
Target Start/End: Original strand, 44296945 - 44297030
Alignment:
Q  33 aatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    |||||||||||||||| ||||||| ||||||||||| ||||| | |||||| |||||  |||  | |||||||||| |||||||||    
T  44296945 aatggtgaaaagtgatgaatttaagtttttaaaagttaaaatatcgttgaatccaatgtaaacctgctacttttggtttccttaac 44297030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 106
Target Start/End: Original strand, 3720151 - 3720231
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactactttt 106  Q
    ||||| |||||||| ||| |||||||||||||||||||||||| ||||  || ||||| ||| ||||||| ||||| ||||    
T  3720151 attgacaaatggtgtaaaatgataaatttaactttttaaaagttaaaacattcttgaatccattacaaatctactattttt 3720231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 107
Target Start/End: Complemental strand, 6548592 - 6548521
Alignment:
Q  36 ggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttg 107  Q
    |||||||| |||| ||||||||||||||||||| ||||| |||||| | ||||| ||||  |||||||||||    
T  6548592 ggtgaaaaatgatgaatttaactttttaaaagttaaaatattgttggatccaatgcaaacttactacttttg 6548521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 83
Target Start/End: Original strand, 18529196 - 18529247
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    ||||||||||||||||| ||||||| |||||  |||||||||||||||||||    
T  18529196 aaatggtgaaaagtgatgaatttaatttttttcaagtcaaaatgttgttgaa 18529247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 123
Target Start/End: Complemental strand, 29959097 - 29959042
Alignment:
Q  68 tcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    |||||||||||||||||||||| |||| ||| ||||||||| |||||||| |||||    
T  29959097 tcaaaatgttgttgaaaccaatgcaaacataatacttttggtttccttaatcattg 29959042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 34835930 - 34835839
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    ||||| |||||| |||  ||||||||||||||||||| ||||| ||||| ||  ||||| |||||||||||||||   |||||||| |||||    
T  34835930 aaatgatgaaaaatgaagaatttaactttttaaaagttaaaatattgttaaattcaatataaatatactacttttaatttccttaatcattg 34835839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 5543119 - 5543061
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    |||||| |||||||||||||||||| |||| ||||||||||||| ||||  ||||||||    
T  5543119 tattgagaaatggtgaaaagtgatatatttgactttttaaaagttaaaaaattgttgaa 5543061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 35003685 - 35003637
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaa 66  Q
    |||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  35003685 aaatattatattgaaaa-tggtgaaaagtgattaatttaactttttaaaa 35003637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 83
Target Start/End: Original strand, 40774279 - 40774336
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    ||||||||||| |||||| |||| ||||||||||||||||||| ||||| ||| ||||    
T  40774279 attgaaaaatgatgaaaattgatgaatttaactttttaaaagttaaaatattgatgaa 40774336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 43 - 107
Target Start/End: Original strand, 18800202 - 18800266
Alignment:
Q  43 agtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttg 107  Q
    |||||||||||||||||||||||| | | ||| |||||||| ||| ||||||  |||||||||||    
T  18800202 agtgataaatttaactttttaaaaattacaatattgttgaatccattacaaacttactacttttg 18800266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 32 - 123
Target Start/End: Complemental strand, 48879736 - 48879645
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    |||| |||||||||||  ||||||| ||||||||||| ||||| ||||||||   |||  |||||| |||||||||  || |||||||||||    
T  48879736 aaatagtgaaaagtgaagaatttaattttttaaaagttaaaatattgttgaatttaatgtaaatatgctacttttgattttcttaaccattg 48879645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 37 - 83
Target Start/End: Original strand, 43189685 - 43189731
Alignment:
Q  37 gtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    |||||||||||| ||||| ||||||||||||| ||||| ||||||||    
T  43189685 gtgaaaagtgatgaatttgactttttaaaagttaaaatattgttgaa 43189731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 118
Target Start/End: Original strand, 1907625 - 1907717
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    |||||||||||||| |||| | || ||||||| ||||||| | ||||||| ||||||||  |||| |||| ||| ||| ||||| |||||||||    
T  1907625 tattgaaaaatggtaaaaaataatgaatttaattttttaataatcaaaatattgttgaatgcaatgcaaacata-tacatttggtttccttaac 1907717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 68
Target Start/End: Original strand, 21577681 - 21577722
Alignment:
Q  27 ttgaaaaatggtgaaaagtgataaatttaactttttaaaagt 68  Q
    ||||||||||||||||| |||  |||||||||||||||||||    
T  21577681 ttgaaaaatggtgaaaaatgaataatttaactttttaaaagt 21577722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 41141097 - 41141040
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttga 82  Q
    ||||| |||||||||||||||  | ||||||||||||||||| ||||||  |||||||    
T  41141097 tattggaaaatggtgaaaagttgttaatttaactttttaaaaatcaaaaaattgttga 41141040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 5977757 - 5977809
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    ||||| ||||||||||||  |||||||||||||||||| ||||  ||||||||    
T  5977757 aaaatagtgaaaagtgatggatttaactttttaaaagttaaaaaattgttgaa 5977809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 35239825 - 35239873
Alignment:
Q  27 ttgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatg 75  Q
    |||||||||| | ||| ||||| ||||||||||||||||||| ||||||    
T  35239825 ttgaaaaatgataaaacgtgatgaatttaactttttaaaagttaaaatg 35239873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 104
Target Start/End: Complemental strand, 42291350 - 42291274
Alignment:
Q  29 gaaaaatggtgaaaagtgataaatttaacttttt-aaaagtcaaaatgttgttgaaaccaatacaaatatactactt 104  Q
    ||||||| ||||||| | |||||||| | ||||| |||||| ||||| |||||||| ||||| |||||||| |||||    
T  42291350 gaaaaatagtgaaaaataataaattttatttttttaaaagttaaaatattgttgaatccaatgcaaatatattactt 42291274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 48705702 - 48705650
Alignment:
Q  27 ttgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgt 79  Q
    |||||||||||||||||||| | |||| |||||| ||||||| |||| |||||    
T  48705702 ttgaaaaatggtgaaaagtgttgaattcaactttctaaaagttaaaaagttgt 48705650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 86; Significance: 4e-41; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 43433856 - 43433751
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||    
T  43433856 aaatatagtattaaaaaatggtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaatacaaacatactacttttggcttcctta 43433757  T
Q  117 accatt 122  Q
    ||||||    
T  43433756 accatt 43433751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 22346262 - 22346368
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||| || ||||||||||||||||||    
T  22346262 aaatatagtattgaaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttcctta 22346361  T
Q  117 accattg 123  Q
    |||||||    
T  22346362 accattg 22346368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 17 - 149
Target Start/End: Original strand, 27209746 - 27209881
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| |||| || ||||||||||||||||||    
T  27209746 aaatataacattggaaaatggtgaaaattgataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatcctacttttggcttcctta 27209845  T
Q  117 accattgc---cagagatatggttagcaagacccta 149  Q
    ||||||||   ||| |  ||||||||||||||||||    
T  27209846 accattgccctcagggcaatggttagcaagacccta 27209881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 34874648 - 34874545
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  34874648 aaatatagcattggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttcctta 34874549  T
Q  117 acca 120  Q
    ||||    
T  34874548 acca 34874545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 24140854 - 24140746
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| |||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||| |||| || ||| ||||||||||||||    
T  24140854 aaatatactattggaaaatggtgaaacgtgataaacttaacttttttaaagtcaaaatgttgttgaaaccaatgcaaacatgctatttttggcttcctta 24140755  T
Q  117 accattgcc 125  Q
    |||||||||    
T  24140754 accattgcc 24140746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 33930047 - 33929947
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  33930047 aaatatagcattgaaaaatagtgaaaactgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttcctta 33929948  T
Q  117 a 117  Q
    |    
T  33929947 a 33929947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 26 - 116
Target Start/End: Original strand, 47655405 - 47655495
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||| ||||||||    
T  47655405 attgaaaaatggtgaaaattgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgccttcctta 47655495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 47895413 - 47895308
Alignment:
Q  19 atataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||| ||| |||| ||  |||||||||||||||||||    
T  47895413 atatagtattgaaaaatggtgaaaggtgataaatttaactttttaaatgtcaaaatattgttgaaactaatgcaaacatgttacttttggcttccttaac 47895314  T
Q  119 cattgc 124  Q
    ||||||    
T  47895313 cattgc 47895308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 11386062 - 11385954
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |||| || |||||||||| || ||||    
T  11386062 aaatatagcattggaaaatggtaaaaattgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggttttctta 11385963  T
Q  117 accattgcc 125  Q
    |||||||||    
T  11385962 accattgcc 11385954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 41147503 - 41147611
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  ||||||||||||| |||| |||| ||||||||||||||||||||||||| |||||||||||||| |||| || ||||||||| ||||||||    
T  41147503 aaatatagcattgaaaaatggtaaaaaatgattaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttgacttcctta 41147602  T
Q  117 accattgcc 125  Q
    |||||||||    
T  41147603 accattgcc 41147611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 28850935 - 28851040
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| ||||||| ||||||||| ||| ||||    
T  28850935 aaatataacattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa-attgttgaaaccaatgcaaatatgctacttttgactttctta 28851033  T
Q  117 accattg 123  Q
    || ||||    
T  28851034 acaattg 28851040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 42607349 - 42607438
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactactttt 106  Q
    |||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||    
T  42607349 aaatatagcattgaaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctactttt 42607438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 49902007 - 49901906
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||| |||| ||  |||||||||||||||||    
T  49902007 aaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaacgttaaaacgttgttgaaaccaatgcaaacatgatacttttggcttcctta 49901908  T
Q  117 ac 118  Q
    ||    
T  49901907 ac 49901906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 4940765 - 4940873
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| || ||| |||||| |||||||    
T  4940765 aaatatagcattggaaaatggttaaaagtgataaatttaactttttaaaagtcaaaatattgttaaaaccaatacaaacatgctatttttggtttcctta 4940864  T
Q  117 accattgcc 125  Q
    || ||||||    
T  4940865 actattgcc 4940873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 6170576 - 6170684
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| ||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| ||  |||||||| ||||||||    
T  6170576 aaatatagcattggaaaatagagaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttgacttcctta 6170675  T
Q  117 accattgcc 125  Q
    |||||||||    
T  6170676 accattgcc 6170684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 11385835 - 11385943
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |   || |||||| |||| ||||||    
T  11385835 aaatatagtattggaaaatggtgaaaagttataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgtaggaatgctacttatggcatcctta 11385934  T
Q  117 accattgcc 125  Q
    |||||||||    
T  11385935 accattgcc 11385943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 2125732 - 2125838
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||  ||  |||||||| |||| |||    
T  2125732 aaatatagcattgaaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatgttgatgaaacaaatacaaccatgttacttttgacttcttta 2125831  T
Q  117 accattg 123  Q
    |||||||    
T  2125832 accattg 2125838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 7190500 - 7190606
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  ||| ||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||| ||| |||| || |||||||| |||||||||    
T  7190500 aaatatagcattcaaaaatgatgaaaagtgataaatttaactttttaaaagttaaaatggtgttgaaactaatgcaaacatgctacttttagcttcctta 7190599  T
Q  117 accattg 123  Q
    |||||||    
T  7190600 accattg 7190606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 49508759 - 49508864
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| |||| || |||||||||||||| |||    
T  49508759 aaatatagcattggaaaatggtgaaa-gtgataaatttaactttttaaaagtcaaaatattgtcgaaaccaatgcaaacatgctacttttggcttcttta 49508857  T
Q  117 accattg 123  Q
    |||||||    
T  49508858 accattg 49508864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 50154554 - 50154449
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  ||||||||||| | |||| ||||||||||||| |||||||||| |||||||||||||||||||| |||| ||  |||||||||||||||||    
T  50154554 aaatatagcattgaaaaatgataaaaaatgataaatttaaccttttaaaagttaaaatgttgttgaaaccaatgcaaacatgttacttttggcttcctta 50154455  T
Q  117 accatt 122  Q
    ||||||    
T  50154454 accatt 50154449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 88
Target Start/End: Complemental strand, 40845332 - 40845261
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaa 88  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  40845332 aaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgttgaaaccaa 40845261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 17 - 89
Target Start/End: Original strand, 32213914 - 32213986
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaat 89  Q
    ||||| || |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  32213914 aaatagaacattggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaat 32213986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 28277507 - 28277610
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| ||||||||||| | ||||||||||||||||||||||||||| | ||||||||||||||| |||| |||| ||  ||||||||  |||||||    
T  28277507 aaatataacattgaaaaatgataaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaacaatgcaaacatgttacttttgatttcctta 28277606  T
Q  117 acca 120  Q
    ||||    
T  28277607 acca 28277610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 932182 - 932287
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||| |||||| | |||||||||| |||||||||||||||||||||||||||| ||| |||| || ||||||||  ||||||||    
T  932182 aaatatagcattggaaaatgatgaaaaattataaatttaattttttaaaagtcaaaatgttgttgaaactaatgcaaacatgctacttttaccttcctta 932281  T
Q  117 accatt 122  Q
    ||||||    
T  932282 accatt 932287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 44359712 - 44359805
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    ||||||||||||||||  ||||||||||||||||||||||||  ||||||||  ||||  |||||||||| |||||| ||||||||||||||||    
T  44359712 aaatggtgaaaagtgaagaatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatactatttttggtttccttaaccattgcc 44359805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 94
Target Start/End: Original strand, 50295458 - 50295535
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||| ||||    
T  50295458 aaatatagtattggaaaatagtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaatcaatgcaaa 50295535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 117
Target Start/End: Original strand, 26469607 - 26469707
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  ||||||||||  |||||| |||||||||||||||||||||||||||||| || |||||||||||  ||| |||||||||||  ||||||||    
T  26469607 aaatatagcattgaaaaataatgaaaaatgataaatttaactttttaaaagtcaaaatattattgaaaccaatgaaaacatactacttttaacttcctta 26469706  T
Q  117 a 117  Q
    |    
T  26469707 a 26469707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 52396523 - 52396416
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| |||||||||||| | ||||||||||||||||||||||||||||||||||| || ||||||| ||| |||| || ||| ||||   |||||||    
T  52396523 aaatatagtattgaaaaatgat-aaaagtgataaatttaactttttaaaagtcaaaatattattgaaacaaatgcaaacatgctatttttaatttcctta 52396425  T
Q  117 accattgcc 125  Q
    |||||||||    
T  52396424 accattgcc 52396416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 122
Target Start/End: Original strand, 8892804 - 8892901
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccatt 122  Q
    ||||| ||||||||||||||| |  ||||||||||||||||||||||||  ||||| ||  ||||| ||||||||||||||| | |||||||||||||    
T  8892804 tattggaaaatggtgaaaagtaaagaatttaactttttaaaagtcaaaacattgttaaattcaatataaatatactacttttagtttccttaaccatt 8892901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 32 - 125
Target Start/End: Complemental strand, 14331903 - 14331810
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    |||||||||||| |||  ||||||||||||||||||||||||  ||||||||  ||||  |||||||||| |||||| ||||||||||||||||    
T  14331903 aaatggtgaaaaatgaagaatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatactatttttggtttccttaaccattgcc 14331810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 31975568 - 31975459
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| ||||||||||| | ||||||| ||||||||||||||||||| ||||||| ||||| |||| ||| |||| ||  || |||| |||| ||||    
T  31975568 aaatataacattgaaaaatgataaaaagtggtaaatttaactttttaaaaatcaaaatattgttaaaactaatgcaaacatgttatttttagctttctta 31975469  T
Q  117 accattgcca 126  Q
    ||||||||||    
T  31975468 accattgcca 31975459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 17 - 120
Target Start/End: Complemental strand, 29966904 - 29966800
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaacttttta-aaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctt 115  Q
    |||||||  ||||||||||||  |||| |||||||||||| |||||  ||||||||||| |||||||||||||| |||| || ||||||||| |||||||    
T  29966904 aaatatagcattgaaaaatggcaaaaaatgataaatttaattttttttaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttgacttcctt 29966805  T
Q  116 aacca 120  Q
    |||||    
T  29966804 aacca 29966800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 31 - 123
Target Start/End: Complemental strand, 48938702 - 48938611
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    ||||||||||||||||| ||||||| |||||||||||||||||  ||||||||   |||  ||||||||||||||||| ||||||||||||||    
T  48938702 aaaatggtgaaaagtgaaaaattta-ctttttaaaagtcaaaacattgttgaatttaatgtaaatatactacttttggtttccttaaccattg 48938611  T

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Target: chr1; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 17 - 126
Target Start/End: Complemental strand, 45721833 - 45721727
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| |||||||| |||| |||||||||||||||||||||| ||||||   |||| ||| |||| |||| || |||||||||  |||||||    
T  45721833 aaatataacattggaaaatggtaaaaactgataaatttaactttttaaaaatcaaaa---tgttaaaatcaatgcaaacatgctacttttgatttcctta 45721737  T
Q  117 accattgcca 126  Q
    ||||||||||    
T  45721736 accattgcca 45721727  T

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Target: chr1; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 43168207 - 43168117
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccatt 122  Q
    ||||||||||||||||  | ||||||||||||||||||||||  ||||||||  ||||  ||||||||||||||||  |||||||||||||    
T  43168207 aaatggtgaaaagtgaagagtttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatactacttttgatttccttaaccatt 43168117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 4656097 - 4656020
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    |||||||| |||| ||||| || ||||||||||||||||||||||||||| | |||||||||||||||| ||| ||||    
T  4656097 aaatataacattggaaaatagtaaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaactaatgcaaa 4656020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 17403021 - 17402928
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||||||| |||||||| | |||  |||  |||||||||||| || ||||||    
T  17403021 tattaaaaaatggtaaaaagtgatgaatttaactttttaaaagtcaaaatattgttgaatctaatgtaaaactactacttttggttttcttaac 17402928  T

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Target: chr1; HSP #38
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 40920259 - 40920165
Alignment:
Q  26 attgaaaaatggtgaaaagtg--ataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    ||||| || ||||||||||||  || ||||||||||||||||||| ||||| |||||||| ||||| |||||  ||||||||||| |||||||||    
T  40920259 attgagaagtggtgaaaagtgtgattaatttaactttttaaaagttaaaatattgttgaatccaatgcaaatccactacttttggtttccttaac 40920165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 71
Target Start/End: Complemental strand, 5945501 - 5945447
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaa 71  Q
    |||||| | ||||||||||||||||||||||||||||| ||||||||||||||||    
T  5945501 aaatatgacattgaaaaatggtgaaaagtgataaattttactttttaaaagtcaa 5945447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 41898892 - 41898950
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    |||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||||||    
T  41898892 tattgaaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatattgttgaa 41898950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 31 - 105
Target Start/End: Complemental strand, 30222688 - 30222613
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaa-gtcaaaatgttgttgaaaccaatacaaatatactacttt 105  Q
    |||||| || |||||||||||||||| ||||||||| || ||||| |||||||||||||| ||||||| |||||||    
T  30222688 aaaatgatggaaagtgataaatttaattttttaaaaagttaaaatattgttgaaaccaatgcaaatatgctacttt 30222613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 51046679 - 51046731
Alignment:
Q  27 ttgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgt 79  Q
    |||||||||||||||||||| | |||| ||||||||||||||||||| |||||    
T  51046679 ttgaaaaatggtgaaaagtgttgaattcaactttttaaaagtcaaaaagttgt 51046731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 25177482 - 25177580
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    |||||| |||| ||||||| |||  || |||| ||||||||||||||||  | ||||||  ||||  ||||||||||||||||| ||| ||||||||||    
T  25177482 tattgagaaatagtgaaaaatgaagaaattaattttttaaaagtcaaaacatcgttgaattcaatgtaaatatactacttttggtttctttaaccattg 25177580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 106
Target Start/End: Original strand, 21268328 - 21268408
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactactttt 106  Q
    |||||| |||||||||||| ||||| ||||||| |||||||||| ||||  ||||||||  |||||||||| ||||| ||||    
T  21268328 tattgagaaatggtgaaaaatgatagatttaac-ttttaaaagttaaaaaattgttgaattcaatacaaatttactattttt 21268408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 27210795 - 27210750
Alignment:
Q  28 tgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 73  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||||    
T  27210795 tgaaaaatggtgaaaaatgatcaatttaactttttaaaagttaaaa 27210750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 25 - 118
Target Start/End: Complemental strand, 51424230 - 51424137
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    ||||||||||| |  ||||||||| |||||||||||||||| || ||||  |||||||| |||||  ||| ||| ||||||||| ||| |||||    
T  51424230 tattgaaaaattgctaaaagtgatgaatttaactttttaaaggttaaaacattgttgaatccaatgtaaacatattacttttggtttctttaac 51424137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 47 - 83
Target Start/End: Original strand, 46296240 - 46296276
Alignment:
Q  47 ataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    |||||||||||||||||||||||||||| ||||||||    
T  46296240 ataaatttaactttttaaaagtcaaaatattgttgaa 46296276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 93
Target Start/End: Original strand, 8414856 - 8414918
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaa 93  Q
    |||||||||||| ||||| ||||| | ||||||||||| ||||| ||||| || |||||||||    
T  8414856 aaaatggtgaaatgtgatgaatttgattttttaaaagttaaaatattgttcaatccaatacaa 8414918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 73
Target Start/End: Complemental strand, 32268080 - 32268034
Alignment:
Q  27 ttgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 73  Q
    |||||||||||||||||||| | |||| |||||| ||||||||||||    
T  32268080 ttgaaaaatggtgaaaagtgttgaattcaactttctaaaagtcaaaa 32268034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 73
Target Start/End: Complemental strand, 44043538 - 44043500
Alignment:
Q  35 tggtgaaaagtgataaatttaactttttaaaagtcaaaa 73  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  44043538 tggtaaaaagtgatatatttaactttttaaaagtcaaaa 44043500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 94
Target Start/End: Complemental strand, 44286933 - 44286876
Alignment:
Q  37 gtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    ||||||| |||||||||||||||||||||| | ||||| || || |||||||| ||||    
T  44286933 gtgaaaaatgataaatttaactttttaaaaattaaaatattattaaaaccaatgcaaa 44286876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 85; Significance: 2e-40; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 51267005 - 51266897
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||    
T  51267005 aaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaatcaatacaaacatgctacttttgacttcctta 51266906  T
Q  117 accattgcc 125  Q
    | |||||||    
T  51266905 atcattgcc 51266897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 30475506 - 30475399
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||| |||| ||| |||||||||||||||||    
T  30475506 aaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaaatgtcaaaatattgttgaaaccaatgcaaacatattacttttggcttcctta 30475407  T
Q  117 accattgc 124  Q
    || |||||    
T  30475406 actattgc 30475399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 19 - 125
Target Start/End: Original strand, 47188695 - 47188801
Alignment:
Q  19 atataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    ||||| ||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| |||| || ||||||||||||||||||||    
T  47188695 atatagtattggaaaatggtgaaaagtgataaatttaacttctaaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaac 47188794  T
Q  119 cattgcc 125  Q
    |||||||    
T  47188795 cattgcc 47188801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 50514641 - 50514747
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| || |||||||||| |||||||    
T  50514641 aaatataacattgaaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggtttcctta 50514740  T
Q  117 accattg 123  Q
    |||||||    
T  50514741 accattg 50514747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 26040388 - 26040491
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||||||||    
T  26040388 aaatatagtattggaaaatggtgaaaagtgataagtttaactttttaaaagtcaaaatattgttgaagccaatgcaaatatgctacttttggcttcctta 26040487  T
Q  117 acca 120  Q
    ||||    
T  26040488 acca 26040491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 34316750 - 34316857
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaa-tttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctt 115  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||| |||| || |||||||||||||||||    
T  34316750 aaatataacattgaaaaatagtgaaaagtgataaaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttcctt 34316849  T
Q  116 aaccattg 123  Q
    ||||||||    
T  34316850 aaccattg 34316857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 26 - 125
Target Start/End: Complemental strand, 45688815 - 45688716
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| || |||||||||||||||||||| ||||||    
T  45688815 attgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaactaatgcaaacatgctacttttggcttccttaactattgcc 45688716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 10100141 - 10100247
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||| ||  |||||||||||| ||||    
T  10100141 aaatataatattagaaaatggtgaaaagttataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttggctttctta 10100240  T
Q  117 accattg 123  Q
    |||||||    
T  10100241 accattg 10100247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 35808424 - 35808530
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  35808424 aaatatagcattggaaaattgtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttcctta 35808523  T
Q  117 accattg 123  Q
    |||||||    
T  35808524 accattg 35808530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 31755019 - 31754914
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| |||| || ||||||||| ||||||||    
T  31755019 aaatatagaattgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttgacttcctta 31754920  T
Q  117 accatt 122  Q
    ||||||    
T  31754919 accatt 31754914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 33951781 - 33951673
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||  || ||||||||||||||    
T  33951781 aaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaatacaaacatgttaattttggcttcctta 33951682  T
Q  117 accattgcc 125  Q
    |||||||||    
T  33951681 accattgcc 33951673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 55669820 - 55669712
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| ||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||| |||| || ||||||||||||||||||    
T  55669820 aaatatagcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttaaaaacaatgcaaacatgctacttttggcttcctta 55669721  T
Q  117 accattgcc 125  Q
    |||||||||    
T  55669720 accattgcc 55669712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 2362712 - 2362602
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaacttttt--aaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcct 114  Q
    ||||||| ||||| |||||||||||||||||||||||||| |||||  |||||||||||||||||| |||||||| |||| |||||||||||| ||||||    
T  2362712 aaatatagtattggaaaatggtgaaaagtgataaatttaattttttttaaaagtcaaaatgttgttaaaaccaatgcaaacatactacttttgacttcct 2362613  T
Q  115 taaccattgcc 125  Q
    |||||||||||    
T  2362612 taaccattgcc 2362602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 41956241 - 41956348
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||| || ||||||||| ||||||||    
T  41956241 aaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaagccaatgcaaacatgctacttttgccttcctta 41956340  T
Q  117 accattgc 124  Q
    ||||||||    
T  41956341 accattgc 41956348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 19328956 - 19329062
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||| || ||||||||| ||||||||    
T  19328956 aaatatagcattggaaaatggtgaaatgtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttgccttcctta 19329055  T
Q  117 accattg 123  Q
    |||||||    
T  19329056 accattg 19329062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 23765659 - 23765553
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| || |||||||| |||||||||    
T  23765659 aaatatagcattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatgttgttgaaaccaatgcaaacatgctacttttagcttcctta 23765560  T
Q  117 accattg 123  Q
    || ||||    
T  23765559 acaattg 23765553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 20811344 - 20811239
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||| |||| || |||||||||||||| |||    
T  20811344 aaatataacattggaaattggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttaaaatcaatgcaaacatgctacttttggcttcttta 20811245  T
Q  117 accatt 122  Q
    ||||||    
T  20811244 accatt 20811239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 26 - 149
Target Start/End: Complemental strand, 31168206 - 31168080
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    |||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||  ||| || |||||||||||||| ||||||||||||    
T  31168206 attggaaaatggtgaaaagtgataaatttaatttttttaaagtcaaaatgttgttgaaaccaatgtaaacattctacttttggcttctttaaccattgcc 31168107  T
Q  126 ---agagatatggttagcaagacccta 149  Q
        |||  ||||||||||||||||||    
T  31168106 tcgggagcaatggttagcaagacccta 31168080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 54339193 - 54339087
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||| || |||||||||||  |||||| ||||||||| ||||||||    
T  54339193 aaatataacattgaaaaatggtgaaaa-tgataaatttaattttttaaaagtcaaaatatttttgaaaccaatgtaaatatgctacttttgacttcctta 54339095  T
Q  117 accattgc 124  Q
    ||||||||    
T  54339094 accattgc 54339087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 32131223 - 32131118
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||  |||||||  |||| |||    
T  32131223 aaatatagtattggaaaatggtgataagtgataaatttaactttttaaaagtcaagatgttgttgaaaccaatgcaaacatgttacttttaacttcttta 32131124  T
Q  117 accatt 122  Q
    ||||||    
T  32131123 accatt 32131118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 34016706 - 34016600
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||| || ||| |||| |||| ||||    
T  34016706 aaatatagcattggaaaatggtgaaaagtgatgaatttaactttttaaaagtcaaaatgttgttgaaatcaatgcaaacattctatttttagctttctta 34016607  T
Q  117 accattg 123  Q
    | |||||    
T  34016606 atcattg 34016600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 17 - 153
Target Start/End: Complemental strand, 45088148 - 45088016
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||| ||||||||||||||||||| ||||| |||||||||||   ||||||| |||| |||| ||||||||||||| |||||||    
T  45088148 aaatatagcattggaaaatgatgaaaagtgataaatttaattttttgaaagtcaaaat---gttgaaatcaatgcaaacatactacttttggtttcctta 45088052  T
Q  117 accattgccagagatatggttagcaagaccctataaa 153  Q
    ||||||||| | |  ||||||||||||||||| ||||    
T  45088051 accattgcccg-gcaatggttagcaagaccctttaaa 45088016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 26831814 - 26831922
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||||||||| |||||||| |||||||||||||||| |||||||||| | ||||||||||||||| |||| |||| || ||||||||| |||| |||    
T  26831814 aaatataatattgtaaaatggtaaaaagtgataaatttatctttttaaaaattaaaatgttgttgaaa-caatgcaaacatgctacttttgacttcttta 26831912  T
Q  117 accattgcca 126  Q
    || |||||||    
T  26831913 acgattgcca 26831922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 52341682 - 52341581
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||| || ||| |||||| |||||| |||| |||||||||||||||||||||||||||||||||| ||||| |||| |||||| |||||| |||||||    
T  52341682 aaatattatgttggaaaatgatgaaaaatgatgaatttaactttttaaaagtcaaaatgttgttgaatccaatgcaaacatactaattttggtttcctta 52341583  T
Q  117 ac 118  Q
    ||    
T  52341582 ac 52341581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 15986339 - 15986239
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    |||||||||||||||||||||| | ||||||| ||||||||||||| ||| ||||||||  |||| |||| || |||||||| | |||||||||||||||    
T  15986339 tattgaaaaatggtgaaaagtggtgaatttaaatttttaaaagtcagaatattgttgaattcaatgcaaacattctacttttagtttccttaaccattgc 15986240  T
Q  125 c 125  Q
    |    
T  15986239 c 15986239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 27839334 - 27839442
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  ||||||||||| |||||| |||||||||||| |||||||||||||||||||| || |||||||| |||| || ||| ||||| | ||||||    
T  27839334 aaatatagcattgaaaaatgatgaaaaatgataaatttaagtttttaaaagtcaaaatgttattaaaaccaatgcaaacatgctatttttgacctcctta 27839433  T
Q  117 accattgcc 125  Q
    | |||||||    
T  27839434 atcattgcc 27839442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 48513692 - 48513592
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    |||||||||||| |||||||||| | |||||||||||||||||||||||  ||||||||  |||| ||| ||||| | |||||| |||||||||||||||    
T  48513692 tattgaaaaatgatgaaaagtgaaagatttaactttttaaaagtcaaaacattgttgaattcaatgcaagtataccaattttggtttccttaaccattgc 48513593  T
Q  125 c 125  Q
    |    
T  48513592 c 48513592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 46 - 124
Target Start/End: Original strand, 9693528 - 9693606
Alignment:
Q  46 gataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    |||||||||||||||||||||||| |||| |||||||||||||| |||| || ||| ||||| ||||||||||||||||    
T  9693528 gataaatttaactttttaaaagtcgaaatattgttgaaaccaatgcaaacatgctatttttgacttccttaaccattgc 9693606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 26 - 107
Target Start/End: Complemental strand, 3769885 - 3769804
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttg 107  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||| ||  |||| ||||  |||||||||||    
T  3769885 attgaaaaatggtgaaaagtgataaatttgactttttaaaagttaaaatattgttaaattcaatgcaaacctactacttttg 3769804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 32 - 125
Target Start/End: Original strand, 31494704 - 31494797
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    ||||||||||||||||  |||||||||||||||| | |||||  ||||||||  ||||  ||||||| ||||||||| ||||||||||||||||    
T  31494704 aaatggtgaaaagtgaagaatttaactttttaaatgacaaaacattgttgaattcaatgtaaatatattacttttggtttccttaaccattgcc 31494797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 30 - 123
Target Start/End: Complemental strand, 40436149 - 40436056
Alignment:
Q  30 aaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    ||||||| |||||| | |||||||||||||||||||  ||||||| |||||||||||||  |||| || |||||||||| || |||||||||||    
T  40436149 aaaaatgatgaaaaataataaatttaactttttaaatatcaaaatattgttgaaaccaaagcaaacatgctacttttggttttcttaaccattg 40436056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 47 - 123
Target Start/End: Original strand, 53567011 - 53567087
Alignment:
Q  47 ataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    |||||||||||||||||||||| ||||||||||||||||  || |||| || ||||||||| |||||||||| ||||    
T  53567011 ataaatttaactttttaaaagttaaaatgttgttgaaactcatgcaaacatgctacttttgacttccttaactattg 53567087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 32 - 107
Target Start/End: Original strand, 35675233 - 35675308
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttg 107  Q
    |||| |||||||||||| ||||||||||||||||||| ||||| ||||||||  |||| |||| ||||||||||||    
T  35675233 aaatagtgaaaagtgatgaatttaactttttaaaagttaaaatattgttgaattcaatgcaaacatactacttttg 35675308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 51018416 - 51018515
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    ||||||||||||||||||||||  ||||||||||||||||| | ||||  ||||||||  ||||  |||||||||||||||   ||| ||||||||||||    
T  51018416 attgaaaaatggtgaaaagtgaagaatttaactttttaaaaattaaaacattgttgaattcaatgtaaatatactacttttaatttctttaaccattgcc 51018515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 52895797 - 52895698
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    |||||| |||| ||||||||||| || ||||||||||||||||||||||  |  |||||  ||||  ||||||||||| ||||| |||||||||||||||    
T  52895797 tattgagaaattgtgaaaagtgaaaattttaactttttaaaagtcaaaacatgcttgaactcaatgtaaatatactacatttggtttccttaaccattgc 52895698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 20456642 - 20456542
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    |||||||||||| |||||||| || ||||||| |||||||| || ||||| ||||||||  |||| |||| || |||||||||  |||||||| ||||||    
T  20456642 tattgaaaaatgatgaaaagttatgaatttaaatttttaaatgttaaaatattgttgaattcaatgcaaacatgctacttttgatttccttaatcattgc 20456543  T
Q  125 c 125  Q
    |    
T  20456542 c 20456542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 25 - 82
Target Start/End: Complemental strand, 46823545 - 46823488
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttga 82  Q
    ||||| ||||||||||||||| || ||||||||||||||||||||||||  |||||||    
T  46823545 tattggaaaatggtgaaaagttatgaatttaactttttaaaagtcaaaaaattgttga 46823488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 29462882 - 29462810
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaat 89  Q
    |||||| ||||||||||||| |||||| |||  ||||| | ||||| |||||||||||||||||||| |||||    
T  29462882 aaatattatattgaaaaatgatgaaaaatgaggaattttattttttcaaagtcaaaatgttgttgaatccaat 29462810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 24 - 83
Target Start/End: Original strand, 36486721 - 36486780
Alignment:
Q  24 atattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    |||||| |||||||||||||||||  ||||||| ||||||||||||||||| || |||||    
T  36486721 atattggaaaatggtgaaaagtgaagaatttaattttttaaaagtcaaaatattattgaa 36486780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 124
Target Start/End: Complemental strand, 55120164 - 55120066
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    ||||||||||| ||||||| |||  ||||| ||||||||||||||||||  ||||||||  ||| | |||||||||| |||||  || ||||||||||||    
T  55120164 tattgaaaaatagtgaaaaatgaagaatttgactttttaaaagtcaaaacattgttgaattcaacataaatatacta-ttttgattttcttaaccattgc 55120066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 19876211 - 19876257
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaacttttta 63  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||    
T  19876211 aaatatagtattggaaaatagtgaaaagtgataaatttaacttttta 19876257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 124
Target Start/End: Original strand, 23690980 - 23691054
Alignment:
Q  50 aatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    |||||||| |||||||| ||||||  ||||||||  ||||  |||||||||| |||||| |||||||||||||||    
T  23690980 aatttaaccttttaaaaatcaaaacattgttgaattcaatgtaaatatactatttttggtttccttaaccattgc 23691054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 30618015 - 30617930
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaa 117  Q
    ||||| |||||||  || |||||||||||||||||||  |||| |||||||| ||||| |||   |||||||||||| ||||||||    
T  30618015 aaatgatgaaaagcaatgaatttaactttttaaaagttcaaatattgttgaatccaatgcaatcctactacttttggtttccttaa 30617930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 118
Target Start/End: Complemental strand, 966654 - 966562
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    ||||||||||| | |||| | || ||||||||||||||||| | ||||| |||||||| |||||  |||  |||||||||||  |||||||||    
T  966654 attgaaaaatgataaaaaattatgaatttaactttttaaaaattaaaatattgttgaatccaatgaaaaactactacttttgatttccttaac 966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 1801683 - 1801635
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaa 65  Q
    |||||| ||||| | |||||||||||||| |||||||||||||||||||    
T  1801683 aaatattatattaagaaatggtgaaaagttataaatttaactttttaaa 1801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Complemental strand, 3472204 - 3472148
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 73  Q
    |||||| ||||| ||||||||||| ||||| | ||||||||||||||||||| ||||    
T  3472204 aaatattatattaaaaaatggtgacaagtgttgaatttaactttttaaaagttaaaa 3472148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 35511216 - 35511264
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 73  Q
    ||||| |||||||||||||||||| ||||| ||||||||||||| ||||    
T  35511216 tattggaaaatggtgaaaagtgatgaatttgactttttaaaagttaaaa 35511264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 35927316 - 35927368
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    |||||||||||||  ||| ||||||||||||||||||| ||||| ||||||||    
T  35927316 aaaatggtgaaaaacgatgaatttaactttttaaaagttaaaatattgttgaa 35927368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 11996139 - 11996182
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagt 68  Q
    ||||| ||||||||||||||||||| |||||||||| |||||||    
T  11996139 tattggaaaatggtgaaaagtgatagatttaactttctaaaagt 11996182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 17 - 76
Target Start/End: Complemental strand, 31487802 - 31487743
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgt 76  Q
    |||||||  |||||||||| || ||||||||||||||| ||||||||||  |||||||||    
T  31487802 aaatatagcattgaaaaatagttaaaagtgataaatttgactttttaaagatcaaaatgt 31487743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 39158373 - 39158455
Alignment:
Q  36 ggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    |||||||||||||  |||||||||||||||| | ||||| ||||| ||  ||||  ||| ||||||||||||  |||||||||    
T  39158373 ggtgaaaagtgatctatttaactttttaaaaattaaaatattgttcaattcaatgtaaacatactacttttgatttccttaac 39158455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 40 - 117
Target Start/End: Original strand, 1457586 - 1457663
Alignment:
Q  40 aaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaa 117  Q
    |||| |||||||||||| ||||||||||| ||||| ||||||||  |||| ||||  || ||||||||  ||||||||    
T  1457586 aaaattgataaatttaattttttaaaagttaaaatattgttgaattcaatgcaaacttattacttttgatttccttaa 1457663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 3684628 - 3684579
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaa 66  Q
    |||||| ||||||| ||||| |||||| |||| |||||||||||||||||    
T  3684628 aaatattatattgagaaatgatgaaaaatgatcaatttaactttttaaaa 3684579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 23260777 - 23260728
Alignment:
Q  26 attgaaaaatggtgaaaag-tgataaatttaactttttaaaagtcaaaat 74  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||| |||||    
T  23260777 attgagaaatggtgaaaagctgatgaatttaactttttaaaagttaaaat 23260728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 83
Target Start/End: Complemental strand, 52021104 - 52021047
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    |||||||||  || |||| ||||||||||||||||||||| || ||||| ||||||||    
T  52021104 attgaaaaactgtaaaaaatgataaatttaactttttaaatgttaaaatattgttgaa 52021047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 90
Target Start/End: Complemental strand, 53484688 - 53484623
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaata 90  Q
    |||||||||||||  ||||  ||| ||||||||||| ||||||| |||||||||| ||| ||||||    
T  53484688 tattgaaaaatgggaaaaaaagatgaatttaactttctaaaagttaaaatgttgtggaatccaata 53484623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 4867807 - 4867859
Alignment:
Q  27 ttgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgt 79  Q
    ||||||| |||||||||||| | |||| || |||||||||||||||| |||||    
T  4867807 ttgaaaagtggtgaaaagtgttgaattcaaatttttaaaagtcaaaaagttgt 4867859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Original strand, 31010463 - 31010511
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 73  Q
    |||||| ||||| | ||||||||  ||||||||||||||||||||||||    
T  31010463 tattgagaaatgataaaaagtgaagaatttaactttttaaaagtcaaaa 31010511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 32584561 - 32584613
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    |||||||| |||||| || |||| |||||||||||||| ||||| ||||||||    
T  32584561 aaaatggtaaaaagtaatgaattcaactttttaaaagttaaaatattgttgaa 32584613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 32 - 80
Target Start/End: Complemental strand, 40593667 - 40593620
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgtt 80  Q
    |||| |||||||||||| |||||||| |||||||||||| |||||||||    
T  40593667 aaatagtgaaaagtgatgaatttaac-ttttaaaagtcataatgttgtt 40593620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 46695990 - 46696026
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatt 53  Q
    |||||||  ||||||||||||||||||||||||||||    
T  46695990 aaatataggattgaaaaatggtgaaaagtgataaatt 46696026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 49483170 - 49483122
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 73  Q
    ||||| ||||||||||||||||||| |||| ||||||| ||||| ||||    
T  49483170 tattggaaaatggtgaaaagtgatagatttgactttttcaaagttaaaa 49483122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 12914256 - 12914151
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  ||||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||| |||||||||||||||||||||    
T  12914256 aaatatagcattgaaaaatggtgaaaagtgataaatttaattttttaaaaatcaaaatattgttgaaaccaatgcaaacatactacttttggcttcctta 12914157  T
Q  117 accatt 122  Q
    ||||||    
T  12914156 accatt 12914151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 13951264 - 13951372
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||  || ||||||||||||||||||    
T  13951264 aaatatagcattgaaaaatggtgaaaagtgataaatttatttttttaaaagtcaaaatgttgttgaaaccaatgcaagcatgctacttttggcttcctta 13951363  T
Q  117 accattgcc 125  Q
    |||||||||    
T  13951364 accattgcc 13951372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 148
Target Start/End: Original strand, 25017319 - 25017453
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| || ||||||||| ||||||||    
T  25017319 aaatatagtattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatatcgttgaaaccaatacaaacatgctacttttgacttcctta 25017418  T
Q  117 accattgc---cagagatatggttagcaagaccct 148  Q
    ||||||||    ||||  |||||||||||||||||    
T  25017419 accattgctttgagagcaatggttagcaagaccct 25017453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 34546859 - 34546751
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||| |||| ||  |||||||||||||||||    
T  34546859 aaatataacattgaaaaatggtgaaaagtgataaatttaattttttaaaagttaaaatgttgttgaaactaatgcaaaaatgatacttttggcttcctta 34546760  T
Q  117 accattgcc 125  Q
    |||||||||    
T  34546759 accattgcc 34546751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 35653283 - 35653391
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| |||| ||  |||||||||||||||||    
T  35653283 aaatatagcattggaaaatggtgaaaagtgataaatttaactttttgaaaatcaaaatgttgttgaaaccaatgcaaacatggtacttttggcttcctta 35653382  T
Q  117 accattgcc 125  Q
    |||||||||    
T  35653383 accattgcc 35653391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 4962544 - 4962652
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| |||||| ||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| || ||||||||| ||| | ||    
T  4962544 aaatataacattggaaaatgatgaaaagtgataaatttaacttttttaaagtcaaaatgttgttgaaactaatacaaacatgctacttttgtctttccta 4962643  T
Q  117 accattgcc 125  Q
    |||||||||    
T  4962644 accattgcc 4962652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 5151570 - 5151468
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| |||||| |||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||| || ||||||||| ||||||||    
T  5151570 aaatataacattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaactaatgcaaacatgctacttttgccttcctta 5151471  T
Q  117 acc 119  Q
    |||    
T  5151470 acc 5151468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 17 - 123
Target Start/End: Original strand, 12068202 - 12068307
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| || ||| ||||| ||| ||||    
T  12068202 aaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttattgacaccaatacaaacatgcta-ttttgactttctta 12068300  T
Q  117 accattg 123  Q
    |||||||    
T  12068301 accattg 12068307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 16315562 - 16315668
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| ||||||||||||||||||||||  |||||||||| |||||||||||||||||||||||| |||| |  ||||||||||||||||||    
T  16315562 aaatatagcattggaaaatggtgaaaagtgataaat--aactttttaatagtcaaaatgttgttgaaaccaatgcaaacacgctacttttggcttcctta 16315659  T
Q  117 accattgcc 125  Q
    |||||||||    
T  16315660 accattgcc 16315668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 8410223 - 8410115
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||  |||||||| |||| ||||||||||||||||||||||||||||||||| || ||||||||||||| || ||| ||||||||||||||    
T  8410223 aaatatagtattagaaaatggtaaaaaatgataaatttaactttttaaaagtcaaaatgttattaaaaccaatacaaacatgctagttttggcttcctta 8410124  T
Q  117 accattgcc 125  Q
    | |||||||    
T  8410123 atcattgcc 8410115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 95
Target Start/End: Complemental strand, 1759898 - 1759820
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaat 95  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  1759898 aaatatagtattgaaaaatggagaaaagtgataaatttaactttttaaaagtcaaaatgttgttaaaaccaatgcaaat 1759820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 28143151 - 28143253
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| ||||  |||||||||||| | |||||||||||||||||||| |||||||||||||||||| |||||||| || |||||||||||||| |||    
T  28143151 aaatataacattgggaaatggtgaaaaataataaatttaactttttaaaaatcaaaatgttgttgaaactaatacaaacatgctacttttggcttcttta 28143250  T
Q  117 acc 119  Q
    |||    
T  28143251 acc 28143253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 122
Target Start/End: Original strand, 3639103 - 3639207
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| ||||||||||| |||||||||||||| |||||||||||| |||| |||||||||||||| |||| ||| |||||||| ||||||||    
T  3639103 aaatataacattggaaaatggtgaagagtgataaatttaattttttaaaagtc-aaatattgttgaaaccaatgcaaacatattacttttgacttcctta 3639201  T
Q  117 accatt 122  Q
    ||||||    
T  3639202 accatt 3639207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 17 - 122
Target Start/End: Complemental strand, 35945327 - 35945222
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||||| ||| |||||||  || ||||||||| ||||    
T  35945327 aaatataacattggaaaatagtgaaaagtgataaatttaactttttaaatgttaaaatgttgttgaaactaatgcaaatatgatatttttggctttctta 35945228  T
Q  117 accatt 122  Q
    ||||||    
T  35945227 accatt 35945222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 4421992 - 4422100
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| ||||||||||||||||||||||||||||||||| || ||||||||||||||||  |||| |||| ||  |||||||| ||||||||    
T  4421992 aaatatagcattggaaaatggtgaaaagtgataaatttaactttttacaaatcaaaatgttgttgaagtcaatgcaaacatgttacttttgacttcctta 4422091  T
Q  117 accattgcc 125  Q
    |||||||||    
T  4422092 accattgcc 4422100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 25568320 - 25568429
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  ||||||||||| |||||||||||| |||||||||||||||| |||||||||| ||||||||||| |||| ||  || |||| | |||||||    
T  25568320 aaatatagcattgaaaaatgatgaaaagtgatacatttaactttttaaaaatcaaaatgttattgaaaccaatgcaaacatgttaattttagtttcctta 25568419  T
Q  117 accattgcca 126  Q
    ||||||||||    
T  25568420 accattgcca 25568429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 17 - 89
Target Start/End: Complemental strand, 37243928 - 37243856
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaat 89  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||| ||||    
T  37243928 aaatataatattggaaaatggtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaatcaat 37243856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 39567984 - 39567876
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||| |||||| |||||||||||||||||||||| ||||||  |||||||||||||| |||| || ||||||||| ||||||||    
T  39567984 aaatatagcattggaaaatgatgaaaaatgataaatttaactttttaaaaatcaaaacattgttgaaaccaatgcaaacatgctacttttgacttcctta 39567885  T
Q  117 accattgcc 125  Q
    | |||||||    
T  39567884 atcattgcc 39567876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 27823340 - 27823235
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| ||||| |||||||||||||||||||||||||||||||||||| | ||||   |||||||| ||||||||| || ||| ||||| ||||||||    
T  27823340 aaatatagtattggaaaatggtgaaaagtgataaatttaactttttaaaaattaaaa---tgttgaaatcaatacaaacatgctaattttgacttcctta 27823244  T
Q  117 accattgcc 125  Q
    | |||||||    
T  27823243 atcattgcc 27823235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 39693082 - 39692984
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    |||||||| |||| |||| ||||||||||| |||||||||||| ||||| ||||||||| ||||||||| ||  |||||||| ||||||||||||||||    
T  39693082 attgaaaagtggtaaaaaatgataaatttatctttttaaaagttaaaatattgttgaaatcaatacaaacatgttacttttgacttccttaaccattgc 39692984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 338792 - 338881
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactactttt 106  Q
    |||||| ||||||||||||| | ||||||||||||||||||||||||||| ||||||| |||||||||| ||| |||| || ||||||||    
T  338792 aaatatgatattgaaaaatgataaaaagtgataaatttaactttttaaaaatcaaaatattgttgaaacaaatgcaaacatgctactttt 338881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 17 - 90
Target Start/End: Original strand, 1479164 - 1479237
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaata 90  Q
    |||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1479164 aaatatagcattgaaaaataatgaaaagtgataaatttaactttttaaaagtcaaaatgttattgaaaccaata 1479237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 117
Target Start/End: Complemental strand, 39335541 - 39335454
Alignment:
Q  30 aaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaa 117  Q
    |||||| || ||||||||| |||||||||||||||||||||||||||||||||| |||||||||| ||| || |||||| ||| ||||    
T  39335541 aaaaatagtaaaaagtgatgaatttaactttttaaaagtcaaaatgttgttgaatccaatacaaacataataattttggtttctttaa 39335454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 43414092 - 43414182
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttg 107  Q
    |||||||  |||| ||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||| |||| ||  ||||||||    
T  43414092 aaatatagcattggaaaatggtgaaaaatgatcaatttaactttttaaaaatcaaaatgttgttgaaaccaatgcaaacatgttacttttg 43414182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 10406860 - 10406772
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcct 114  Q
    ||||||||||||| |||||||||||||||||| ||||| ||| ||||||| |||||||| ||||| |||| ||  ||||||||| |||||    
T  10406860 tattgaaaaatggagaaaagtgataaatttaa-ttttttaaattcaaaatattgttgaatccaatgcaaaaatgttacttttggtttcct 10406772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 32 - 103
Target Start/End: Original strand, 10017664 - 10017733
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactact 103  Q
    |||||||||||| ||||||||  |||||||||||||| ||||||||||| |||||||| |||| ||||||||    
T  10017664 aaatggtgaaaattgataaat--aactttttaaaagttaaaatgttgttaaaaccaatgcaaacatactact 10017733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 106
Target Start/End: Original strand, 10163667 - 10163743
Alignment:
Q  30 aaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactactttt 106  Q
    ||||| ||||||||||||  ||||||||||||||||||||||||| ||| ||||  ||||| |||||||||| ||||    
T  10163667 aaaaagggtgaaaagtgaagaatttaactttttaaaagtcaaaatattgctgaattcaatataaatatactattttt 10163743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 39167668 - 39167569
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    ||||| ||||||||||||||| | |||||||||||||||||| ||||||  ||||| ||  ||||  ||||||| ||||||||| || ||||||||||||    
T  39167668 tattggaaaatggtgaaaagtaa-aaatttaactttttaaaaatcaaaacattgttaaattcaatgtaaatatattacttttggttttcttaaccattgc 39167570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 16899635 - 16899677
Alignment:
Q  52 tttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  16899635 tttaactttttaaaagtcaaaatgttgttgaatccaatacaaa 16899677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 39069312 - 39069370
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    ||||| ||||| |||||||||||| |||||||| |||||||||||||||| ||||||||    
T  39069312 tattggaaaattgtgaaaagtgatgaatttaacattttaaaagtcaaaatattgttgaa 39069370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 51 - 122
Target Start/End: Complemental strand, 15915083 - 15915014
Alignment:
Q  51 atttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccatt 122  Q
    |||||||||||||||||| ||||| || |||||| |||  |||| ||||||||||||| |||||||||||||    
T  15915083 atttaactttttaaaagttaaaatatttttgaaatcaa--caaacatactacttttggtttccttaaccatt 15915014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 20184585 - 20184677
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    ||||| ||| ||||||||||||| ||||| ||||||||||||| ||||  |||||||| | |||||||  ||| ||||||||  |||||||||    
T  20184585 attgagaaacggtgaaaagtgatgaatttcactttttaaaagttaaaacattgttgaatctaatacaatcatattacttttgatttccttaac 20184677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 105
Target Start/End: Original strand, 4293892 - 4293947
Alignment:
Q  50 aatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttt 105  Q
    ||||||||||||||||||||||||  || ||||| |||||| ||||||||||||||    
T  4293892 aatttaactttttaaaagtcaaaagattattgaatccaatataaatatactacttt 4293947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 4838322 - 4838259
Alignment:
Q  57 ctttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaacca 120  Q
    |||||||||||||||||| |||||||||| ||| |||| ||  || ||||||||||||||||||    
T  4838322 ctttttaaaagtcaaaatattgttgaaactaatgcaaacatgttatttttggcttccttaacca 4838259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 68
Target Start/End: Complemental strand, 24288560 - 24288517
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagt 68  Q
    |||||| |||||||||||||||||| ||||||||||||||||||    
T  24288560 tattgagaaatggtgaaaagtgatagatttaactttttaaaagt 24288517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 25 - 68
Target Start/End: Original strand, 24373661 - 24373704
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagt 68  Q
    |||||| |||||||||||||||||| ||||||||||||||||||    
T  24373661 tattgagaaatggtgaaaagtgatagatttaactttttaaaagt 24373704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 26 - 125
Target Start/End: Original strand, 38610329 - 38610428
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    ||||||||||| | ||||||||  ||||||||||||||||||||||||  ||||||||   |||  ||||| |||| ||||   ||||||||||||||||    
T  38610329 attgaaaaatgataaaaagtgaagaatttaactttttaaaagtcaaaacattgttgaatttaatctaaataaactatttttaatttccttaaccattgcc 38610428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 39042063 - 39042170
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| |||||  |||||| || | ||||||| ||||||||||| |||||||||||||   ||||  ||| || ||| |||||||||| |||    
T  39042063 aaatataacattgtaaaataatgaaaaatggttaatttaattttttaaaagttaaaatgttgttgatgtcaatgtaaacatgctatttttggcttcttta 39042162  T
Q  117 accattgc 124  Q
    ||||||||    
T  39042163 accattgc 39042170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 25 - 78
Target Start/End: Complemental strand, 27535168 - 27535114
Alignment:
Q  25 tattgaaaaatggtgaaaagtgat-aaatttaactttttaaaagtcaaaatgttg 78  Q
    |||||||||||||||||||||||| || ||||| ||||||||||| |||||||||    
T  27535168 tattgaaaaatggtgaaaagtgatgaattttaagtttttaaaagttaaaatgttg 27535114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 73
Target Start/End: Original strand, 28599682 - 28599738
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 73  Q
    |||||| |||||| ||||| ||||||| |||||||||| ||||||||||||| ||||    
T  28599682 aaatattatattggaaaatagtgaaaaatgataaatttgactttttaaaagttaaaa 28599738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 66
Target Start/End: Complemental strand, 40099400 - 40099364
Alignment:
Q  30 aaaaatggtgaaaagtgataaatttaactttttaaaa 66  Q
    |||||||||||||||||||||||||||| ||||||||    
T  40099400 aaaaatggtgaaaagtgataaatttaaccttttaaaa 40099364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 31 - 66
Target Start/End: Complemental strand, 5058812 - 5058777
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaa 66  Q
    ||||| ||||||||||||||||||||||||||||||    
T  5058812 aaaattgtgaaaagtgataaatttaactttttaaaa 5058777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 25 - 83
Target Start/End: Complemental strand, 678523 - 678465
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    ||||| ||||||||||||||| || |||||||| |||||||||| ||||  ||||||||    
T  678523 tattggaaaatggtgaaaagtaatgaatttaaccttttaaaagttaaaaaattgttgaa 678465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 73
Target Start/End: Original strand, 12349586 - 12349628
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 73  Q
    ||||||||||||||||||| |||| ||||||||||||| ||||    
T  12349586 aaaatggtgaaaagtgatagatttgactttttaaaagttaaaa 12349628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 15915913 - 15915871
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactt 59  Q
    |||||||  |||| |||||||||||||||||||||||||||||    
T  15915913 aaatatagcattggaaaatggtgaaaagtgataaatttaactt 15915871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 95
Target Start/End: Original strand, 6823794 - 6823859
Alignment:
Q  31 aaaatggtgaaaagtgataaattt-aactttttaaaagtcaaaatgttgttgaaaccaatacaaat 95  Q
    |||| |||| ||||| |||||||| |||||||||||||| ||||| |||||||| ||||| |||||    
T  6823794 aaaacggtggaaagtaataaattttaactttttaaaagttaaaatattgttgaatccaatgcaaat 6823859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 3015092 - 3015144
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 83  Q
    ||||| ||| ||| |||| ||||||||||||||||||| ||||| ||||||||    
T  3015092 aaaatagtgtaaaatgattaatttaactttttaaaagttaaaatattgttgaa 3015144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 94
Target Start/End: Complemental strand, 19894886 - 19894822
Alignment:
Q  30 aaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    ||||||||| |||  |||| ||||||||||||||||||| ||||| ||||| || ||||| ||||    
T  19894886 aaaaatggttaaatatgatgaatttaactttttaaaagttaaaatattgttaaatccaattcaaa 19894822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 1e-35; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 10855513 - 10855406
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||||||  ||| |||    
T  10855513 aaatataatattgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaacc-atgcaaatatgctacttttgatttcttta 10855415  T
Q  117 accattgcc 125  Q
    |||||||||    
T  10855414 accattgcc 10855406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 32 - 126
Target Start/End: Complemental strand, 12191559 - 12191465
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcca 126  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||||||||||||    
T  12191559 aaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaatcaatacaaacatgctacttttgccttccttaaccattgcca 12191465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 7875209 - 7875317
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  |||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||| || | || ||||||||||||||||||    
T  7875209 aaatatagcattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatgcagacatgctacttttggcttcctta 7875308  T
Q  117 accattgcc 125  Q
    | |||||||    
T  7875309 atcattgcc 7875317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 149
Target Start/End: Original strand, 7880469 - 7880590
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc---ag 127  Q
    |||||| ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| | || ||||||||||||||||||| |||||||   ||    
T  7880469 aaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaactaatacagacatgctacttttggcttccttaatcattgccccgag 7880568  T
Q  128 agatatggttagcaagacccta 149  Q
     |  ||||||||||||||||||    
T  7880569 ggtaatggttagcaagacccta 7880590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 5578355 - 5578247
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||  ||||||||||  ||| || |||||||||||||||||||||||||||||| |||||||||| ||| |||| || ||||||||| ||||||||    
T  5578355 aaatatagcattgaaaaataatgagaattgataaatttaactttttaaaagtcaaaatattgttgaaacaaatgcaaacatgctacttttgacttcctta 5578256  T
Q  117 accattgcc 125  Q
    |||||||||    
T  5578255 accattgcc 5578247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 7274242 - 7274349
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    |||||||| |||| ||||||  ||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| ||  ||||||||| |||||||    
T  7274242 aaatataacattggaaaatgacgaaaagtgataaatttaacattttaaaagttaaaatgttgttgaaatcaatacaaacatgttacttttggtttcctta 7274341  T
Q  117 accattgc 124  Q
    | ||||||    
T  7274342 atcattgc 7274349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 32786110 - 32786042
Alignment:
Q  57 ctttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    ||||||||||||||||||||||||||||||||| |||| || |||||||||| ||||||||||||||||    
T  32786110 ctttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggtttccttaaccattgcc 32786042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 31 - 94
Target Start/End: Complemental strand, 6866982 - 6866919
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| ||||    
T  6866982 aaaatggtgaaaagtgataaatttaaccttttaaaagtcaaaatgttgttgaaatcaatgcaaa 6866919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 123
Target Start/End: Complemental strand, 12175640 - 12175535
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttcctta 116  Q
    ||||||| |||||||||||| | |||| |||||||||||||||||||||||| |||| ||| || |||||||| |||| |||||||||||   |||||||    
T  12175640 aaatatagtattgaaaaatgataaaaactgataaatttaactttttaaaagttaaaa-gttattaaaaccaatgcaaacatactacttttaagttcctta 12175542  T
Q  117 accattg 123  Q
    |||||||    
T  12175541 accattg 12175535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 26572119 - 26572213
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    |||||| | |||||||||||||||||  |||||||||| ||||| ||||| |||||||| |||| || ||||||||| |||||||||||||||||    
T  26572119 aaaatgataaaaagtgataaatttaatattttaaaagttaaaatattgttaaaaccaatgcaaacatgctacttttgacttccttaaccattgcc 26572213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 17 - 75
Target Start/End: Original strand, 29692369 - 29692427
Alignment:
Q  17 aaatataatattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatg 75  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29692369 aaatatagtattgaaaaatggtgaaaagtgataaatttaactttttaagagtcaaaatg 29692427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 117
Target Start/End: Original strand, 31220365 - 31220455
Alignment:
Q  27 ttgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaa 117  Q
    |||||||||||| ||||||||| ||||||||||||||||||| |||||||| |||||   ||| |||| ||||||||||||| ||||||||    
T  31220365 ttgaaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatgttattgaataaaatgcaaacatactacttttggtttccttaa 31220455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 123
Target Start/End: Original strand, 8324141 - 8324238
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    ||||| |||| ||||||| |||||||||||||||||||||| | ||||||||||||||||||||| ||| ||  || ||||  |||||||||||||||    
T  8324141 attgagaaattgtgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaaaccaatataaacatgttatttttaccttccttaaccattg 8324238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 49 - 125
Target Start/End: Original strand, 16437642 - 16437718
Alignment:
Q  49 aaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    |||||||||||||||||||| ||||| |||||||||||||| |||| || ||||| |||| ||||||||||||||||    
T  16437642 aaatttaactttttaaaagtaaaaatattgttgaaaccaatgcaaacatgctactgttggtttccttaaccattgcc 16437718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 126
Target Start/End: Complemental strand, 29964374 - 29964273
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    |||||| |||||||||||| | |  ||||||||||||||||||||||||  ||||||||  ||||  ||||||| || |||||| |||||||||||||||    
T  29964374 tattgagaaatggtgaaaaataaataatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatattatttttgggttccttaaccattgc 29964275  T
Q  125 ca 126  Q
    ||    
T  29964274 ca 29964273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 34780023 - 34780112
Alignment:
Q  34 atggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    ||||||||||||||  ||||||||||||||||||| ||||  ||||||||  ||||  ||||||||||||||||  ||||||||||||||    
T  34780023 atggtgaaaagtgaagaatttaactttttaaaagttaaaacattgttgaattcaatgtaaatatactacttttgatttccttaaccattg 34780112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 25 - 119
Target Start/End: Original strand, 27127543 - 27127637
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaacc 119  Q
    |||||| |||||||||||| |||| |||||||||||||||||||||| || |||||||| ||| |  ||| ||||||  ||||| ||||||||||    
T  27127543 tattgagaaatggtgaaaaatgatgaatttaactttttaaaagtcaagatattgttgaatccattgtaaaaatactatatttgggttccttaacc 27127637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 38 - 123
Target Start/End: Original strand, 6507438 - 6507523
Alignment:
Q  38 tgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    |||||||||| |||||||||||||||||| ||||||  ||||||||  ||||  | ||||||||||||||  ||||||||||||||    
T  6507438 tgaaaagtgaaaaatttaactttttaaaaatcaaaacattgttgaattcaatgtatatatactacttttgatttccttaaccattg 6507523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 25 - 123
Target Start/End: Original strand, 12226367 - 12226465
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattg 123  Q
    |||||| ||||| | ||||||||  ||||||||||||| ||||| ||||  ||||||||  ||||  |||||||||| |||||| ||||||||||||||    
T  12226367 tattgagaaatgattaaaagtgaagaatttaactttttgaaagtaaaaacattgttgaattcaatgtaaatatactatttttggtttccttaaccattg 12226465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 107
Target Start/End: Original strand, 14232528 - 14232609
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttg 107  Q
    ||||||||||||||||||||||| |||||| ||||| |||||||||||  |||| ||| | |||  ||| ||||||||||||    
T  14232528 attgaaaaatggtgaaaagtgatgaatttagcttttcaaaagtcaaaacattgtcgaatctaatgtaaacatactacttttg 14232609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 31 - 122
Target Start/End: Complemental strand, 1947472 - 1947381
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccatt 122  Q
    |||||||| ||||||| |||||| |||||| |||||||||||| |||||     ||||||||||  |||||||||| | |||||||||||||    
T  1947472 aaaatggtaaaaagtgttaaattcaactttctaaaagtcaaaaagttgtaatttccaatacaaaactactacttttagtttccttaaccatt 1947381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 117
Target Start/End: Original strand, 21186058 - 21186145
Alignment:
Q  30 aaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaa 117  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||| || ||||| | ||| ||||  | |||||||||  ||||||||    
T  21186058 aaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatattattgaatctaatgcaaaattgctacttttgatttccttaa 21186145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 19646068 - 19645970
Alignment:
Q  27 ttgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    |||||||||||||||||||| | |||| ||||||||||||||||| | ||||      ||||| ||||  |||||||||| | ||||||||||||||||    
T  19646068 ttgaaaaatggtgaaaagtgttgaattcaactttttaaaagtcaataagttggcatttccaatgcaaaactactacttttagtttccttaaccattgcc 19645970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 32 - 94
Target Start/End: Complemental strand, 28014701 - 28014639
Alignment:
Q  32 aaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaa 94  Q
    |||||||||||| |||| | ||| ||||||||||||| ||||| |||||||| ||||| ||||    
T  28014701 aaatggtgaaaaatgatgagtttgactttttaaaagttaaaatattgttgaatccaatgcaaa 28014639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 5029488 - 5029564
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatacta 101  Q
    |||||||||||||| ||| ||  | ||||||||||||||||||| |||||  |||||||   ||||||||| |||||    
T  5029488 tattgaaaaatggtaaaatgttgtgaatttaactttttaaaagttaaaatagtgttgaatttaatacaaatttacta 5029564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 31490739 - 31490819
Alignment:
Q  38 tgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    |||||||||||| |||||| |||| |||||| ||||  ||||||||  |||||||||  ||||| |||| | |||||||||    
T  31490739 tgaaaagtgatagatttaatttttaaaaagttaaaaaattgttgaattcaatacaaacttactatttttagtttccttaac 31490819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 26 - 118
Target Start/End: Original strand, 392169 - 392261
Alignment:
Q  26 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||| || |||||||| |||||||||||    
T  392169 attgaaaaatggtaaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccgatgcaaacatgctacttttcgcttccttaac 392261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 67; Significance: 9e-30; HSPs: 3)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 16813 - 16907
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||||| |||| || |||||||||||||||||||||||||||    
T  16813 aaaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgcc 16907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 26981 - 27075
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||||| |||| || |||||||||||||||||||||||||||    
T  26981 aaaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgcc 27075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 31 - 125
Target Start/End: Original strand, 37147 - 37241
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgcc 125  Q
    ||||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||||| |||| || |||||||||||||||||||||||||||    
T  37147 aaaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgcc 37241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 39660 - 39562
Alignment:
Q  25 tattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaaccattgc 124  Q
    ||||| ||||| ||||||| |||  |||||||||||||||||||||| ||  |||||||  ||||  ||||||||||||||||| |||||||||||||||    
T  39660 tattggaaaatagtgaaaactgaagaatttaactttttaaaagtcaacat--tgttgaattcaatgtaaatatactacttttggtttccttaaccattgc 39563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0809 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0809
Description:

Target: scaffold0809; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 48 - 107
Target Start/End: Original strand, 4705 - 4764
Alignment:
Q  48 taaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttg 107  Q
    |||||||||||||||||||||||| ||||||||||||  ||| |||| || |||||||||    
T  4705 taaatttaactttttaaaagtcaatatgttgttgaaattaatgcaaacatgctacttttg 4764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 73
Target Start/End: Original strand, 9046 - 9092
Alignment:
Q  27 ttgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 73  Q
    |||||||||||||||||||| | |||| |||||||||||||||||||    
T  9046 ttgaaaaatggtgaaaagtgttgaattcaactttttaaaagtcaaaa 9092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 37428 - 37507
Alignment:
Q  38 tgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatacaaatatactacttttggcttccttaac 118  Q
    |||||| |||| |||||||||||| ||||||||||||||| ||||| ||||| | || || |||||||||  |||||||||    
T  37428 tgaaaaatgatgaatttaacttttcaaaagtcaaaatgttattgaatccaatgc-aacattctacttttgatttccttaac 37507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 107
Target Start/End: Original strand, 8773 - 8850
Alignment:
Q  31 aaaatggtgaaaagtgataaatttaactttt-taaaagtcaaaatgttgttgaaaccaatacaaatatactacttttg 107  Q
    |||||| |||||| |||| |||||||||||| |||||||||| || | |||||| |  |||||||| |||||||||||    
T  8773 aaaatgatgaaaaatgatgaatttaacttttttaaaagtcaatatatcgttgaatcttatacaaatctactacttttg 8850  T

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Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Complemental strand, 97850 - 97809
Alignment:
Q  24 atattgaaaaatggtgaaaagtgataaatttaactttttaaa 65  Q
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T  97850 atattaaaaaatggtgaaaagtgaaaaatttaactttctaaa 97809  T

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