View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20608_high_25 (Length: 238)
Name: NF20608_high_25
Description: NF20608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20608_high_25 |
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Alignment Details
Target: chr8 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 8726602 - 8726382
Alignment:
| Q |
1 |
cagtcagcttgcatgagtgcaaatccatgtgaattctggaaacttaatttgcctatcttataatggtgaaattcctaaaacaaacacatgcctagtggca |
100 |
Q |
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| T |
8726602 |
cagtcagcttgcatgagtgcaaatccatgtgaattctgaaaacttaatttgcctatcttataatggtgaaattcctaaaacaaacacatgcctagtggca |
8726503 |
T |
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| Q |
101 |
gcacctgcggatcgttaaacgtttctacggtccttatttgattatggaatggattggacaggttgcttacaaactggccttgcctcctgattccaaaatt |
200 |
Q |
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|||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
8726502 |
gcacctacggatcgttaaacgtttctacggtccttatttgattatggaacggattggacaggttgcttacaaactggccttgcctcctcattccaaaatt |
8726403 |
T |
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| Q |
201 |
catgatgttctccattgctcc |
221 |
Q |
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||||||||||||||||||||| |
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| T |
8726402 |
catgatgttctccattgctcc |
8726382 |
T |
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