View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20608_high_9 (Length: 462)

Name: NF20608_high_9
Description: NF20608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20608_high_9
NF20608_high_9
[»] chr7 (15 HSPs)
chr7 (6-236)||(18514809-18515039)
chr7 (254-444)||(18515066-18515256)
chr7 (8-82)||(13416935-13417009)
chr7 (7-82)||(9807796-9807871)
chr7 (6-107)||(1985977-1986078)
chr7 (6-82)||(22100465-22100541)
chr7 (17-101)||(19604496-19604580)
chr7 (7-99)||(20133340-20133432)
chr7 (6-82)||(22080840-22080916)
chr7 (6-54)||(14076678-14076726)
chr7 (6-54)||(14386706-14386754)
chr7 (6-46)||(20338932-20338972)
chr7 (6-82)||(22070083-22070159)
chr7 (6-54)||(29874511-29874559)
chr7 (7-79)||(36260228-36260300)
[»] chr2 (2 HSPs)
chr2 (6-366)||(14514594-14514948)
chr2 (391-443)||(14514526-14514578)
[»] chr6 (7 HSPs)
chr6 (6-107)||(6947902-6948003)
chr6 (6-107)||(6954541-6954642)
chr6 (142-228)||(6921487-6921573)
chr6 (17-107)||(20770597-20770687)
chr6 (6-107)||(6921372-6921473)
chr6 (142-210)||(6943091-6943159)
chr6 (17-80)||(6943000-6943063)
[»] scaffold0867 (1 HSPs)
scaffold0867 (6-82)||(4691-4767)
[»] chr5 (2 HSPs)
chr5 (6-54)||(18964852-18964900)
chr5 (6-82)||(29597574-29597650)
[»] scaffold0128 (1 HSPs)
scaffold0128 (6-84)||(4107-4185)
[»] chr4 (1 HSPs)
chr4 (6-82)||(53774812-53774888)


Alignment Details
Target: chr7 (Bit Score: 159; Significance: 2e-84; HSPs: 15)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 18514809 - 18515039
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaacacatgcagtccattaacacagaaa 105  Q
    |||||||| | ||||||||||||||| | |||||||||||||||||||| | ||||||||||||||| ||||||||||||||| |||||||| |||||||    
T  18514809 gtccaagagttttcaactccaaattcgtccattttccatataatgaaatggcttttcttgaaatcataagaaaaacacatgcaatccattaaaacagaaa 18514908  T
Q  106 gacagtccactgatggagaaagaaatggacgagtaagtagctcctcattacaagattgagggagcaagaattgtgtatatgtatctgtcttcaaatcaag 205  Q
    |||||||||||| |||||| | || |||||||||||||||||| | |||||||||| ||||||||||||| ||||||||||| |||||||||||||||||    
T  18514909 gacagtccactgttggagataaaattggacgagtaagtagctctttattacaagatcgagggagcaagaactgtgtatatgtctctgtcttcaaatcaag 18515008  T
Q  206 cgagacaataacatattgttcaatggtaaga 236  Q
    |||||||||||||||||||||||||||||||    
T  18515009 cgagacaataacatattgttcaatggtaaga 18515039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 254 - 444
Target Start/End: Original strand, 18515066 - 18515256
Alignment:
Q  254 gcggtgacagatcaaccaattgatactattattcaaataaacagtatcacattgagtgaaacaaaaacgatgagggacaactacgacaggaaaatattga 353  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  18515066 gcggtgacagaccaaccaattgatactattattcaaatagacagtatcgcattgagtgtaacaaaaacgatgagggacaactacgacaggaaaatattga 18515165  T
Q  354 ataactctccaagaattagcnnnnnnnnnnnnnnnnncgccccccaaagtgtaaactcttgcagcggttttcccaatagctacaaggttgc 444  Q
    ||||||||||||| ||||||                 |||||||||||||| ||||||||||||| |||||||||||||||||||||||||    
T  18515166 ataactctccaagcattagcattattattattattatcgccccccaaagtgaaaactcttgcagcagttttcccaatagctacaaggttgc 18515256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 13416935 - 13417009
Alignment:
Q  8 ccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaaca 82  Q
    |||||| | ||||||||||||||| ||||||| |||||| || |||||||||||||| ||||||| |||||||||    
T  13416935 ccaagactcttcaactccaaattccttcatttgccatatgataaaataggttttcttaaaatcataagaaaaaca 13417009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 82
Target Start/End: Complemental strand, 9807871 - 9807796
Alignment:
Q  7 tccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaaca 82  Q
    ||||||| | ||||||||||||||| ||||| | |||||||| ||||| ||||||||| ||||||||| |||||||    
T  9807871 tccaagactcttcaactccaaattccttcatctgccatataacgaaatcggttttcttcaaatcatgacaaaaaca 9807796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 1985977 - 1986078
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaacacatgcagtccattaacacagaaa 105  Q
    |||||||| | |||||| |||||||| ||||||| ||| | ||  |||| ||||||||||||||||| ||||||| | | ||| ||||| ||||||||||    
T  1985977 gtccaagattcttcaacgccaaattccttcatttgccaaagaacaaaatgggttttcttgaaatcataagaaaaatagaggcaatccatcaacacagaaa 1986076  T
Q  106 ga 107  Q
    ||    
T  1986077 ga 1986078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 22100541 - 22100465
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaaca 82  Q
    |||||||| | || |||||||||||  ||||||| ||||||||| ||||  ||||| ||||||||||||||||||||    
T  22100541 gtccaagactcttgaactccaaatttcttcatttgccatataataaaatgagtttttttgaaatcatgagaaaaaca 22100465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 19604496 - 19604580
Alignment:
Q  17 ttcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaacacatgcagtccattaacaca 101  Q
    ||||||||||||||| ||||| | ||||||||| || |  ||||| |  ||||||||||||||||| ||| ||||||| ||||||    
T  19604496 ttcaactccaaattccttcatctgccatataataaagtgagttttatgaaaatcatgagaaaaacaaatggagtccatcaacaca 19604580  T

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Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 99
Target Start/End: Original strand, 20133340 - 20133432
Alignment:
Q  7 tccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaacacatgcagtccattaaca 99  Q
    ||||||||| ||||||||||||||| ||||||| |||||  |  ||||  ||||  ||| ||||||| |||||||||||||| ||| ||||||    
T  20133340 tccaagaatcttcaactccaaattctttcatttgccatactaccaaatgagtttgtttgtaatcatgtgaaaaacacatgcaatcctttaaca 20133432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 22080916 - 22080840
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaaca 82  Q
    |||||||| | || |||||||||||  ||||||| ||||||||| ||||  ||||  ||||||||||||||||||||    
T  22080916 gtccaagactcttgaactccaaattgcttcatttgccatataataaaatgagtttgtttgaaatcatgagaaaaaca 22080840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 14076726 - 14076678
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaat 54  Q
    |||||||| | ||||||||||||||| ||||||| |||||||| |||||    
T  14076726 gtccaagagtcttcaactccaaattccttcatttgccatataacgaaat 14076678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 14386754 - 14386706
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaat 54  Q
    |||||||| | ||||||||||||||| ||||||| |||||||| |||||    
T  14386754 gtccaagagtcttcaactccaaattccttcatttgccatataacgaaat 14386706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 20338972 - 20338932
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatat 46  Q
    |||||||||| ||||||||| ||||| ||||||||||||||    
T  20338972 gtccaagaatcttcaactcctaattccttcattttccatat 20338932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 22070159 - 22070083
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaaca 82  Q
    |||||||| | || |||||||||||  ||||||| ||||||||| ||||  |||   ||||||||||||||||||||    
T  22070159 gtccaagactcttgaactccaaattgcttcatttgccatataataaaatgagttcgtttgaaatcatgagaaaaaca 22070083  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 29874559 - 29874511
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaat 54  Q
    |||||||||| |||||| |||||||  ||||||| ||||||||||||||    
T  29874559 gtccaagaatcttcaaccccaaatttcttcatttgccatataatgaaat 29874511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 7 - 79
Target Start/End: Complemental strand, 36260300 - 36260228
Alignment:
Q  7 tccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaa 79  Q
    ||||||| | ||||||||||||||| | ||| ||||||||||  ||||  ||||||||| |||||| ||||||    
T  36260300 tccaagactcttcaactccaaattcttccatcttccatataacaaaatcagttttcttgtaatcattagaaaa 36260228  T

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Target: chr2 (Bit Score: 149; Significance: 2e-78; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 6 - 366
Target Start/End: Complemental strand, 14514948 - 14514594
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaacacatgcagtccattaacacagaaa 105  Q
    |||||||||| ||||||||||||||||| ||||||||||||||  | || ||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  14514948 gtccaagaatcttcaactccaaattcatccattttccatataacaagatgggttttcttgaaatcataagaaaaacacatgcagtcccttaacacagaaa 14514849  T
Q  106 gacagtccactgatggagaaagaaatggacgagtaagtagctcctcattacaagattgagggagcaagaattgtgtatatgtatctgtcttcaaatcaag 205  Q
    |||||||||||||   ||||||||||||||    ||||||||  | ||| |||||||||||||||||||| ||||||||||| |||||| ||||||||||    
T  14514848 gacagtccactgacacagaaagaaatggac----aagtagcttttaattgcaagattgagggagcaagaactgtgtatatgtctctgtcctcaaatcaag 14514753  T
Q  206 cgagacaataacatattgttc-aatggtaagannnnnnnnnnnnnnnnngcggtgacagatcaaccaattgatactattattcaaataaacagtatcaca 304  Q
    |||||||| |||| ||||||| ||||||||||                 ||||||||||| |||||||||||||||||||||||||||||||||||| ||    
T  14514752 cgagacaaaaacaaattgttcaaatggtaaga---ttgttattgttgttgcggtgacagaccaaccaattgatactattattcaaataaacagtatcgca 14514656  T
Q  305 ttgagtgaaacaaaaacgatgagggacaactacgacaggaaaatattgaataactctccaag 366  Q
     |||| |||||| |||  | ||||||| ||||| || |||||| |||||||| |||||||||    
T  14514655 ctgagcgaaacagaaattacgagggacgactactacgggaaaacattgaatatctctccaag 14514594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 443
Target Start/End: Complemental strand, 14514578 - 14514526
Alignment:
Q  391 cgccccccaaagtgtaaactcttgcagcggttttcccaatagctacaaggttg 443  Q
    |||||||||||||| ||||| |||||||||||||||| | |||||||||||||    
T  14514578 cgccccccaaagtgaaaacttttgcagcggttttccctagagctacaaggttg 14514526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 6947902 - 6948003
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaacacatgcagtccattaacacagaaa 105  Q
    |||||||| | ||||||||||||||| ||||||| ||| | ||  || | |||||||||||||||||| |||||||| | ||| ||||| ||||||||||    
T  6947902 gtccaagattcttcaactccaaattccttcatttgccaaagaacaaagtgggttttcttgaaatcatgtgaaaaacaaaggcaatccatcaacacagaaa 6948001  T
Q  106 ga 107  Q
    ||    
T  6948002 ga 6948003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 6954541 - 6954642
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaacacatgcagtccattaacacagaaa 105  Q
    |||||||| | ||||||||||||||| ||||||| ||| ||||  |||| |||||| |||||||||| ||| ||||| | ||| ||||| || |||||||    
T  6954541 gtccaagattcttcaactccaaattccttcatttgccaaataacaaaatgggttttgttgaaatcataagataaacagaggcaatccatcaatacagaaa 6954640  T
Q  106 ga 107  Q
    ||    
T  6954641 ga 6954642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 228
Target Start/End: Original strand, 6921487 - 6921573
Alignment:
Q  142 gtagctcctcattacaagattgagggagcaagaattgtgtatatgtatctgtcttcaaatcaagcgagacaataacatattgttcaa 228  Q
    ||||||| |||| |||| || |||||||||| |||||||||||||| ||||||  ||||||||| ||||  || ||| |||||||||    
T  6921487 gtagctcttcatcacaacatcgagggagcaacaattgtgtatatgtctctgtccccaaatcaagtgagatcatcacaaattgttcaa 6921573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 107
Target Start/End: Complemental strand, 20770687 - 20770597
Alignment:
Q  17 ttcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaacacatgcagtccattaacacagaaaga 107  Q
    ||||| ||||||||| ||||||| ||||||||  ||||| ||||| || | ||||||||||||||| || || ||||| |||||| |||||    
T  20770687 ttcaattccaaattccttcatttgccatataacaaaataagtttttttaacatcatgagaaaaacaaatacaatccatcaacacacaaaga 20770597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 6 - 107
Target Start/End: Original strand, 6921372 - 6921473
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaacacatgcagtccattaacacagaaa 105  Q
    |||||||| | ||||||||||||||| ||||||| ||| ||||  |||| |||||||||  |||||| ||||||| | | ||| ||||| || |||||||    
T  6921372 gtccaagattcttcaactccaaattccttcatttgccagataacaaaatgggttttcttagaatcataagaaaaatagaggcaatccatcaatacagaaa 6921471  T
Q  106 ga 107  Q
    ||    
T  6921472 ga 6921473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 6943091 - 6943159
Alignment:
Q  142 gtagctcctcattacaagattgagggagcaagaattgtgtatatgtatctgtcttcaaatcaagcgaga 210  Q
    ||||||| |||| |||| ||||||||||||| |||| ||||||||| ||||||  ||||||||| ||||    
T  6943091 gtagctcttcatcacaacattgagggagcaacaattttgtatatgtctctgtccccaaatcaagtgaga 6943159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 80
Target Start/End: Original strand, 6943000 - 6943063
Alignment:
Q  17 ttcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaa 80  Q
    ||||||||||||||| ||||||| | | ||||  |||||||||||||| ||||||| |||||||    
T  6943000 ttcaactccaaattccttcatttgctaaataacaaaataggttttcttaaaatcataagaaaaa 6943063  T

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Target: scaffold0867 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0867
Description:

Target: scaffold0867; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 4691 - 4767
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaaca 82  Q
    |||||||| | || |||||||||||  ||||||| ||||||||| ||||  ||||| ||||||||||||||||||||    
T  4691 gtccaagactcttgaactccaaatttcttcatttgccatataataaaatgagtttttttgaaatcatgagaaaaaca 4767  T

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Target: chr5 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 18964852 - 18964900
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaat 54  Q
    |||||||| | ||||||||||||||| ||||||| ||||||||||||||    
T  18964852 gtccaagagtcttcaactccaaattccttcatttgccatataatgaaat 18964900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 82
Target Start/End: Original strand, 29597574 - 29597650
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaaca 82  Q
    |||||||| | |||||||||||||||| |||||| ||||||||  ||||  |||| ||||||||  |||||||||||    
T  29597574 gtccaagattgttcaactccaaattcaatcatttgccatataacaaaatgagtttccttgaaatggtgagaaaaaca 29597650  T

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Target: scaffold0128 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 4185 - 4107
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaacaca 84  Q
    |||||||||| ||||  |||||||||  |||| ||||||||||  |||| ||| ||||||||||||||| | |||||||    
T  4185 gtccaagaattttcatttccaaattctgtcatcttccatataaccaaatcggtcttcttgaaatcatgatacaaacaca 4107  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 82
Target Start/End: Complemental strand, 53774888 - 53774812
Alignment:
Q  6 gtccaagaatattcaactccaaattcattcattttccatataatgaaataggttttcttgaaatcatgagaaaaaca 82  Q
    |||||||| | ||||||||||||||| ||||||| ||||||||  ||||  ||||  || ||||||| |||||||||    
T  53774888 gtccaagactcttcaactccaaattccttcatttgccatataacaaaatgagtttctttaaaatcataagaaaaaca 53774812  T

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