View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20608_low_20 (Length: 251)
Name: NF20608_low_20
Description: NF20608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20608_low_20 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 28851544 - 28851303
Alignment:
| Q |
1 |
ttgcatgtgaactttcaggagaagaatttggatataattcatcagttgttttttcatcacatttagagttctcccatgcagaatctagcactccgattgg |
100 |
Q |
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| T |
28851544 |
ttgcatgtgaactttcaggagaagaatttggatataattcatcagttgttttttcatcacatttagagttctcccatgaagaatctagcactccaacagg |
28851445 |
T |
|
| Q |
101 |
gctttcaggtacacatgttccaaagtcgatgctgcttaaatcagaagaaacttccatccaacccaaatttttcatcagttcaagacacttcaaagttttg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
28851444 |
gctttcaggtacacatgttccaaagtcgatgctgcttaaatcagaagaaacttccatccagcccaaatttttcatcagttcaagacacttcaaagttttg |
28851345 |
T |
|
| Q |
201 |
tcctgcataacaaaaatttcataactcaataagtagaataat |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
28851344 |
tcctgcataacaaaaatttcataactcaataagtagaataat |
28851303 |
T |
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