View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20608_low_22 (Length: 247)

Name: NF20608_low_22
Description: NF20608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20608_low_22
NF20608_low_22
[»] chr5 (37 HSPs)
chr5 (1-219)||(7897945-7898163)
chr5 (1-219)||(17920814-17921032)
chr5 (1-219)||(26183264-26183483)
chr5 (1-219)||(20498183-20498403)
chr5 (61-215)||(20845828-20845983)
chr5 (61-207)||(22130877-22131022)
chr5 (71-215)||(20740971-20741115)
chr5 (72-213)||(30605727-30605869)
chr5 (72-216)||(22404794-22404940)
chr5 (75-216)||(26036794-26036936)
chr5 (72-216)||(26329247-26329392)
chr5 (72-216)||(24189843-24189989)
chr5 (72-216)||(25105453-25105599)
chr5 (72-216)||(25164546-25164692)
chr5 (61-215)||(13735007-13735163)
chr5 (71-216)||(23420594-23420741)
chr5 (72-212)||(13338573-13338713)
chr5 (61-214)||(22184633-22184786)
chr5 (123-216)||(22246384-22246478)
chr5 (81-150)||(11204712-11204781)
chr5 (107-216)||(23623894-23624003)
chr5 (77-212)||(18221096-18221232)
chr5 (82-215)||(13942031-13942166)
chr5 (129-216)||(22252074-22252162)
chr5 (75-216)||(20714769-20714912)
chr5 (62-157)||(17661503-17661598)
chr5 (81-148)||(24394622-24394690)
chr5 (82-162)||(24117586-24117667)
chr5 (61-163)||(9522506-9522608)
chr5 (81-148)||(15116782-15116850)
chr5 (72-168)||(9422549-9422646)
chr5 (121-189)||(20127026-20127093)
chr5 (2-109)||(20286717-20286825)
chr5 (82-157)||(22979736-22979811)
chr5 (81-153)||(11756301-11756373)
chr5 (81-148)||(19006639-19006706)
chr5 (81-148)||(19663578-19663646)
[»] chr4 (42 HSPs)
chr4 (1-219)||(23541154-23541372)
chr4 (1-219)||(19894834-19895052)
chr4 (1-219)||(24143044-24143263)
chr4 (1-216)||(46741783-46741998)
chr4 (2-219)||(25354666-25354884)
chr4 (1-218)||(11325176-11325395)
chr4 (1-219)||(22554879-22555100)
chr4 (76-215)||(21478093-21478233)
chr4 (72-213)||(15700347-15700490)
chr4 (73-212)||(11905077-11905215)
chr4 (107-216)||(16383907-16384017)
chr4 (72-216)||(28019285-28019431)
chr4 (77-216)||(10190872-10191013)
chr4 (72-216)||(25116804-25116952)
chr4 (73-215)||(13399338-13399481)
chr4 (79-216)||(9068933-9069071)
chr4 (119-216)||(23400227-23400325)
chr4 (72-216)||(33899021-33899167)
chr4 (72-215)||(8163763-8163910)
chr4 (108-215)||(18618150-18618258)
chr4 (61-216)||(33745933-33746089)
chr4 (73-216)||(10724241-10724385)
chr4 (73-216)||(10938010-10938154)
chr4 (115-211)||(19659463-19659560)
chr4 (61-216)||(10721954-10722109)
chr4 (61-216)||(10935723-10935878)
chr4 (61-216)||(15162521-15162677)
chr4 (81-160)||(33737973-33738053)
chr4 (121-208)||(19183722-19183809)
chr4 (80-216)||(50907840-50907977)
chr4 (80-148)||(13268835-13268904)
chr4 (61-180)||(41785404-41785524)
chr4 (107-189)||(32861664-32861746)
chr4 (81-148)||(11865215-11865283)
chr4 (61-215)||(10198285-10198439)
chr4 (81-148)||(24608696-24608764)
chr4 (81-157)||(2679839-2679916)
chr4 (107-184)||(16655405-16655481)
chr4 (88-148)||(17871604-17871665)
chr4 (62-149)||(11289438-11289525)
chr4 (78-148)||(13875961-13876031)
chr4 (81-148)||(19564825-19564893)
[»] chr1 (30 HSPs)
chr1 (1-219)||(45599359-45599577)
chr1 (8-219)||(40313253-40313464)
chr1 (75-219)||(33062370-33062515)
chr1 (61-213)||(17038218-17038369)
chr1 (72-216)||(26972432-26972578)
chr1 (61-219)||(52436849-52437008)
chr1 (72-212)||(4246016-4246158)
chr1 (101-219)||(17012013-17012132)
chr1 (72-215)||(17851406-17851550)
chr1 (61-215)||(47941373-47941527)
chr1 (72-216)||(11667895-11668040)
chr1 (76-216)||(1973298-1973439)
chr1 (61-213)||(12753031-12753184)
chr1 (61-216)||(23477967-23478123)
chr1 (119-211)||(20841302-20841394)
chr1 (72-216)||(14745815-14745960)
chr1 (118-216)||(13165422-13165521)
chr1 (82-215)||(17379656-17379790)
chr1 (82-189)||(17355891-17355998)
chr1 (71-163)||(15804196-15804289)
chr1 (81-153)||(18390200-18390273)
chr1 (80-148)||(49086692-49086761)
chr1 (72-150)||(20859641-20859720)
chr1 (111-215)||(51472126-51472230)
chr1 (61-156)||(10340249-10340345)
chr1 (88-148)||(50057518-50057579)
chr1 (64-153)||(41330897-41330987)
chr1 (82-162)||(8281911-8281992)
chr1 (80-148)||(23600515-23600584)
chr1 (81-148)||(25123330-25123398)
[»] chr6 (57 HSPs)
chr6 (1-219)||(16137612-16137830)
chr6 (2-219)||(15038257-15038476)
chr6 (1-218)||(19215864-19216081)
chr6 (71-219)||(9384594-9384743)
chr6 (71-219)||(15003192-15003341)
chr6 (61-215)||(15007370-15007524)
chr6 (61-215)||(16309392-16309545)
chr6 (71-218)||(20003117-20003265)
chr6 (72-215)||(20558283-20558427)
chr6 (78-219)||(12444752-12444891)
chr6 (72-216)||(33665774-33665920)
chr6 (72-216)||(34657184-34657329)
chr6 (77-213)||(15897710-15897847)
chr6 (77-216)||(17855180-17855321)
chr6 (77-216)||(20470236-20470376)
chr6 (107-216)||(9281741-9281851)
chr6 (79-216)||(24501812-24501950)
chr6 (107-216)||(13195340-13195450)
chr6 (107-216)||(25805470-25805579)
chr6 (114-215)||(21723442-21723543)
chr6 (72-212)||(20989802-20989943)
chr6 (76-216)||(29254949-29255089)
chr6 (61-216)||(28623499-28623654)
chr6 (111-219)||(32449271-32449379)
chr6 (72-213)||(17527920-17528063)
chr6 (72-216)||(14258891-14259037)
chr6 (72-212)||(17864462-17864603)
chr6 (72-212)||(23882731-23882872)
chr6 (72-215)||(21706383-21706528)
chr6 (107-216)||(12039715-12039824)
chr6 (118-216)||(25964722-25964821)
chr6 (118-216)||(25969369-25969468)
chr6 (118-216)||(25973809-25973908)
chr6 (72-216)||(17234572-17234718)
chr6 (61-215)||(26965604-26965760)
chr6 (73-172)||(25782793-25782893)
chr6 (122-215)||(13870399-13870493)
chr6 (78-216)||(3567455-3567592)
chr6 (72-216)||(8465705-8465846)
chr6 (127-216)||(19171452-19171542)
chr6 (66-163)||(21323360-21323457)
chr6 (81-148)||(22885237-22885305)
chr6 (84-163)||(20765080-20765160)
chr6 (81-148)||(3904767-3904834)
chr6 (61-153)||(30424905-30424998)
chr6 (82-157)||(18152798-18152874)
chr6 (81-148)||(22903195-22903263)
chr6 (120-215)||(11960511-11960608)
chr6 (80-148)||(12464156-12464225)
chr6 (85-148)||(1103411-1103474)
chr6 (81-148)||(3357097-3357165)
chr6 (89-148)||(13553349-13553409)
chr6 (81-143)||(22918045-22918108)
chr6 (148-213)||(19894656-19894722)
chr6 (80-140)||(16176583-16176644)
chr6 (88-148)||(28045031-28045092)
chr6 (81-148)||(14448583-14448651)
[»] chr8 (33 HSPs)
chr8 (2-219)||(17279797-17280017)
chr8 (2-216)||(8726772-8726970)
chr8 (2-219)||(37155555-37155774)
chr8 (61-219)||(17880769-17880928)
chr8 (1-219)||(39080876-39081094)
chr8 (61-219)||(33466190-33466348)
chr8 (72-216)||(24091938-24092083)
chr8 (118-219)||(22874206-22874307)
chr8 (107-213)||(22476247-22476354)
chr8 (61-162)||(23249705-23249806)
chr8 (76-216)||(33977043-33977184)
chr8 (61-216)||(9996469-9996625)
chr8 (61-215)||(1683948-1684100)
chr8 (72-216)||(11221305-11221445)
chr8 (72-216)||(23541443-23541589)
chr8 (61-215)||(25240375-25240531)
chr8 (107-215)||(12814626-12814734)
chr8 (107-216)||(13660405-13660513)
chr8 (107-216)||(13719048-13719156)
chr8 (76-189)||(33961746-33961860)
chr8 (61-157)||(1562459-1562556)
chr8 (72-155)||(45133645-45133729)
chr8 (134-206)||(22485177-22485250)
chr8 (80-215)||(23864501-23864637)
chr8 (78-189)||(24850493-24850603)
chr8 (79-189)||(20254943-20255054)
chr8 (111-216)||(24384582-24384687)
chr8 (131-216)||(27925479-27925564)
chr8 (81-158)||(12240228-12240306)
chr8 (81-148)||(24482308-24482376)
chr8 (159-216)||(45136184-45136241)
chr8 (79-148)||(32179295-32179365)
chr8 (82-157)||(18753875-18753951)
[»] chr7 (69 HSPs)
chr7 (1-218)||(7619991-7620208)
chr7 (1-219)||(48797648-48797868)
chr7 (1-219)||(3290713-3290933)
chr7 (1-219)||(14984584-14984800)
chr7 (1-219)||(15414195-15414411)
chr7 (71-219)||(11628620-11628769)
chr7 (1-219)||(14975343-14975561)
chr7 (1-219)||(15404819-15405037)
chr7 (82-219)||(30226076-30226215)
chr7 (82-219)||(42782747-42782885)
chr7 (61-214)||(9564227-9564379)
chr7 (72-215)||(13455145-13455289)
chr7 (61-213)||(9566876-9567027)
chr7 (65-215)||(4794623-4794772)
chr7 (61-212)||(10658353-10658505)
chr7 (71-216)||(11560538-11560683)
chr7 (79-213)||(15436037-15436172)
chr7 (66-216)||(15506243-15506394)
chr7 (72-210)||(20991523-20991662)
chr7 (72-216)||(11521442-11521588)
chr7 (72-216)||(4458720-4458866)
chr7 (79-216)||(14926635-14926773)
chr7 (79-216)||(15350101-15350239)
chr7 (107-216)||(16207913-16208023)
chr7 (72-216)||(16436755-16436900)
chr7 (61-213)||(42636217-42636370)
chr7 (72-216)||(645114-645260)
chr7 (72-216)||(11588445-11588591)
chr7 (107-216)||(29546170-29546279)
chr7 (107-216)||(10279832-10279940)
chr7 (72-216)||(11998860-11999006)
chr7 (61-163)||(26133000-26133103)
chr7 (81-150)||(2076496-2076565)
chr7 (81-150)||(2082915-2082984)
chr7 (80-163)||(23174966-23175050)
chr7 (118-216)||(14165193-14165292)
chr7 (61-215)||(7586563-7586718)
chr7 (80-162)||(24813914-24813997)
chr7 (61-162)||(15708142-15708243)
chr7 (80-155)||(31269148-31269224)
chr7 (122-212)||(12325845-12325936)
chr7 (81-157)||(23057196-23057273)
chr7 (61-189)||(26195518-26195645)
chr7 (71-144)||(4547851-4547924)
chr7 (61-155)||(20596918-20597013)
chr7 (128-212)||(20925138-20925222)
chr7 (61-180)||(23956847-23956967)
chr7 (82-156)||(7508426-7508501)
chr7 (61-162)||(24902078-24902178)
chr7 (82-163)||(10251431-10251513)
chr7 (81-148)||(12505697-12505766)
chr7 (107-180)||(23082842-23082915)
chr7 (107-163)||(9894152-9894208)
chr7 (107-155)||(10309583-10309631)
chr7 (61-156)||(20588800-20588895)
chr7 (81-147)||(10260231-10260298)
chr7 (62-156)||(14687339-14687433)
chr7 (82-215)||(23579987-23580121)
chr7 (109-163)||(6045340-6045393)
chr7 (80-148)||(9732836-9732905)
chr7 (81-148)||(12484267-12484336)
chr7 (82-153)||(19353122-19353193)
chr7 (79-189)||(21260503-21260614)
chr7 (107-157)||(11407041-11407091)
chr7 (80-148)||(2392878-2392947)
chr7 (84-148)||(5299140-5299205)
chr7 (80-148)||(21546902-21546971)
chr7 (116-209)||(10038767-10038861)
chr7 (61-126)||(24049508-24049572)
[»] chr3 (53 HSPs)
chr3 (2-218)||(8748951-8749167)
chr3 (1-219)||(9031411-9031629)
chr3 (1-216)||(9036618-9036833)
chr3 (72-216)||(295441-295586)
chr3 (61-215)||(13913762-13913915)
chr3 (72-216)||(17702387-17702533)
chr3 (61-213)||(7479173-7479324)
chr3 (72-212)||(13917825-13917964)
chr3 (62-216)||(6580899-6581054)
chr3 (61-216)||(8224810-8224966)
chr3 (77-216)||(18547634-18547775)
chr3 (61-213)||(7495964-7496115)
chr3 (61-216)||(18034928-18035084)
chr3 (61-216)||(18064238-18064394)
chr3 (72-216)||(13790660-13790806)
chr3 (72-216)||(15635905-15636051)
chr3 (66-212)||(11558357-11558501)
chr3 (66-212)||(11567626-11567770)
chr3 (77-212)||(20748200-20748335)
chr3 (79-216)||(11656010-11656148)
chr3 (76-212)||(28051121-28051258)
chr3 (61-212)||(12054485-12054635)
chr3 (79-216)||(17042786-17042924)
chr3 (77-212)||(23954593-23954730)
chr3 (61-216)||(18476901-18477055)
chr3 (72-212)||(24195505-24195646)
chr3 (119-216)||(19633915-19634012)
chr3 (72-216)||(44452461-44452607)
chr3 (77-216)||(13524714-13524853)
chr3 (107-182)||(19531950-19532025)
chr3 (62-147)||(10082375-10082461)
chr3 (82-215)||(31649682-31649814)
chr3 (62-148)||(10189299-10189386)
chr3 (78-180)||(15686226-15686329)
chr3 (120-215)||(21718959-21719054)
chr3 (118-203)||(1919281-1919367)
chr3 (82-189)||(3552274-3552381)
chr3 (81-148)||(8531382-8531450)
chr3 (58-156)||(14406722-14406821)
chr3 (92-148)||(20976090-20976147)
chr3 (73-163)||(286978-287069)
chr3 (107-157)||(980456-980506)
chr3 (81-148)||(8147641-8147709)
chr3 (107-163)||(21094787-21094842)
chr3 (80-130)||(42243780-42243831)
chr3 (81-148)||(19584010-19584078)
chr3 (81-148)||(43902135-43902202)
chr3 (107-156)||(3445098-3445146)
chr3 (80-148)||(15962262-15962330)
chr3 (176-216)||(18483403-18483444)
chr3 (86-123)||(40199885-40199922)
chr3 (97-148)||(20962162-20962214)
chr3 (145-212)||(21254029-21254097)
[»] chr2 (37 HSPs)
chr2 (74-218)||(18765659-18765804)
chr2 (71-219)||(29565993-29566140)
chr2 (75-219)||(13314996-13315141)
chr2 (61-216)||(19466556-19466712)
chr2 (77-215)||(36398828-36398968)
chr2 (72-216)||(23758606-23758752)
chr2 (72-216)||(24790191-24790337)
chr2 (114-216)||(26860329-26860432)
chr2 (72-216)||(12910470-12910616)
chr2 (81-194)||(15328299-15328412)
chr2 (72-216)||(22610873-22611019)
chr2 (109-212)||(21530404-21530507)
chr2 (61-219)||(20649587-20649746)
chr2 (107-218)||(25347210-25347321)
chr2 (61-156)||(21250290-21250387)
chr2 (80-189)||(24317871-24317981)
chr2 (82-163)||(31587467-31587548)
chr2 (81-157)||(12952462-12952539)
chr2 (81-148)||(31067586-31067654)
chr2 (82-163)||(27111071-27111152)
chr2 (81-148)||(17395546-17395614)
chr2 (107-157)||(19198371-19198420)
chr2 (107-157)||(24283621-24283671)
chr2 (81-148)||(17363507-17363575)
chr2 (81-148)||(45550031-45550098)
chr2 (61-216)||(24317222-24317380)
chr2 (92-145)||(25867173-25867227)
chr2 (88-148)||(20378326-20378387)
chr2 (81-148)||(8163074-8163142)
chr2 (81-148)||(30947324-30947392)
chr2 (111-157)||(20476669-20476715)
chr2 (116-157)||(20475368-20475409)
chr2 (84-148)||(21713452-21713517)
chr2 (85-141)||(28645773-28645830)
chr2 (81-113)||(18593566-18593598)
chr2 (117-189)||(23801868-23801939)
chr2 (136-219)||(27107556-27107639)
[»] scaffold0143 (1 HSPs)
scaffold0143 (61-219)||(36268-36426)
[»] scaffold0064 (1 HSPs)
scaffold0064 (62-215)||(52960-53112)
[»] scaffold0032 (1 HSPs)
scaffold0032 (75-219)||(103090-103234)
[»] scaffold0328 (1 HSPs)
scaffold0328 (4-219)||(17002-17219)
[»] scaffold0338 (1 HSPs)
scaffold0338 (72-215)||(16247-16391)
[»] scaffold0102 (1 HSPs)
scaffold0102 (72-216)||(36986-37132)
[»] scaffold0022 (1 HSPs)
scaffold0022 (79-219)||(3111-3249)
[»] scaffold0103 (1 HSPs)
scaffold0103 (72-216)||(25706-25852)
[»] scaffold0008 (1 HSPs)
scaffold0008 (72-212)||(40316-40457)
[»] scaffold0259 (1 HSPs)
scaffold0259 (61-216)||(17311-17467)
[»] scaffold0037 (1 HSPs)
scaffold0037 (111-216)||(110289-110395)
[»] scaffold0003 (1 HSPs)
scaffold0003 (72-216)||(26385-26530)
[»] scaffold0226 (3 HSPs)
scaffold0226 (72-213)||(7576-7718)
scaffold0226 (75-216)||(18160-18302)
scaffold0226 (75-216)||(27554-27696)
[»] scaffold0088 (1 HSPs)
scaffold0088 (107-212)||(36609-36715)
[»] scaffold0006 (1 HSPs)
scaffold0006 (72-215)||(87716-87861)
[»] scaffold0059 (2 HSPs)
scaffold0059 (72-210)||(50130-50270)
scaffold0059 (61-216)||(61506-61662)
[»] scaffold0190 (1 HSPs)
scaffold0190 (72-216)||(16657-16803)
[»] scaffold0185 (1 HSPs)
scaffold0185 (72-216)||(2391-2537)
[»] scaffold0333 (1 HSPs)
scaffold0333 (72-203)||(5627-5759)
[»] scaffold0035 (1 HSPs)
scaffold0035 (118-215)||(37393-37491)
[»] scaffold0072 (1 HSPs)
scaffold0072 (81-148)||(18540-18607)
[»] scaffold0062 (1 HSPs)
scaffold0062 (81-145)||(2182-2247)
[»] scaffold0015 (1 HSPs)
scaffold0015 (111-163)||(202416-202468)
[»] scaffold0505 (1 HSPs)
scaffold0505 (82-157)||(10128-10204)
[»] scaffold0205 (1 HSPs)
scaffold0205 (88-148)||(9969-10030)
[»] scaffold0423 (1 HSPs)
scaffold0423 (80-155)||(13596-13672)
[»] scaffold0054 (1 HSPs)
scaffold0054 (81-148)||(8754-8822)
[»] scaffold0520 (1 HSPs)
scaffold0520 (82-163)||(5409-5491)
[»] scaffold0070 (1 HSPs)
scaffold0070 (83-126)||(3650-3694)


Alignment Details
Target: chr5 (Bit Score: 191; Significance: 1e-104; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 7898163 - 7897945
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtg 100  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  7898163 gatgttgaataaaatgtttcgaacactaagctaacacaagacaagaaaaatgcaaagcataaagtaaaagacacagtgagtttgttaacccagttcggtg 7898064  T
Q  101 caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgac 200  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  7898063 caacgtcacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgcactaatgac 7897964  T
Q  201 ctaggacctacccgtactg 219  Q
    |||||||||||||||||||    
T  7897963 ctaggacctacccgtactg 7897945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 17921032 - 17920814
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtg 100  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  17921032 gatgttgaataaaatgtttcgaacactaagctaacacaagacaagaaaaatgcaaagcataaaataaaaggcacagtgagtttgttaacccagttcggtg 17920933  T
Q  101 caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgac 200  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||    
T  17920932 caacgtcacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaaaagctctcagcaaactcctcgtttgcacttatgac 17920833  T
Q  201 ctaggacctacccgtactg 219  Q
    |||||||||||||||||||    
T  17920832 ctaggacctacccgtactg 17920814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 26183483 - 26183264
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggt 99  Q
    |||||||||||||||||||||||||| ||||||||| || ||||| ||||  ||||||||||| |||||  |||||| ||||||||||||||||||||||    
T  26183483 gatgttgaataaaatgtttcgaacactaagctaaca-aagacaagtaaaacacaaagcataaaagtaaatggcacagagagtttgttaacccagttcggt 26183385  T
Q  100 gcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atg 198  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |||||||| ||||||||||||| |||    
T  26183384 gcaacgtcacctactctgggggctaccaagccaggaaggaaatacactagtgtagtccttattcaatagctctcagcaaacttctcgtttgcactatatg 26183285  T
Q  199 acctaggacctacccgtactg 219  Q
    |||||| ||||||||||||||    
T  26183284 acctagaacctacccgtactg 26183264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 20498403 - 20498183
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatg-cacagtgagtttgttaacccagttcgg 98  Q
    |||||||||| ||||||||||||||| ||||||||| |||||||| |||| | |||||||||| |||||| | |||||||| ||||||||||||||||||    
T  20498403 gatgttgaatgaaatgtttcgaacactaagctaaca-aaaacaagtaaaacgtaaagcataaaagtaaaaagacacagtgaatttgttaacccagttcgg 20498305  T
Q  99 tgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-at 197  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||| |||||||||||||| |||||||||||||||||||||| ||    
T  20498304 tgcaacgtcacctactctggaggctaccaagtcaggaaggaaatccactcgtgtagtccttattcaatagctctcagcaaactcctcgtttgcactatat 20498205  T
Q  198 gacctaggacctacccgtactg 219  Q
    ||||||||||||||||||||||    
T  20498204 gacctaggacctacccgtactg 20498183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 20845983 - 20845828
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    ||||||||| |||||  ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| ||    
T  20845983 aaagtaaaaggcacacagagtttgttaacccagttcggtgcaacgtcacctactatgggggctaccaagtcaggaaggaaatccactagtgtagtcctta 20845884  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcac-taatgacctaggacctacccgt 215  Q
    ||||| | |||| |||||||||||||||| ||| | ||||||||||||||||||||    
T  20845883 ttcaaaatctctcagcaaactcctcgtttacactttatgacctaggacctacccgt 20845828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 61 - 207
Target Start/End: Complemental strand, 22131022 - 22130877
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||    
T  22131022 aaagtaaaaagcacagagagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccactagtgtaatcctta 22130924  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggac 207  Q
    |||  ||||||| |||||||||||||||| |||||| ||||||||||    
T  22130923 ttctctagctctcagcaaactcctcgtttacactaaagacctaggac 22130877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 71 - 215
Target Start/End: Complemental strand, 20741115 - 20740971
Alignment:
Q  71 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||| |||||||||| |||||| |||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||  |||||    
T  20741115 gcacagtgagtctgttaacccaattcggttcaacgtcacctactctgggggctaccaagcgaggagggaaatccactagtgtagtccttattctctagct 20741016  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacccgt 215  Q
    || |||||||||||||||| |||||| ||||||||||||| ||||    
T  20741015 ctcagcaaactcctcgtttacactaaagacctaggacctatccgt 20740971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 213
Target Start/End: Complemental strand, 30605869 - 30605727
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||| ||||||||||||| |||   |||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||| ||||||    
T  30605869 cacagtgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaatccaggaaggaaatccactagtgcagtccttattctatagct 30605770  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctaccc 213  Q
    || |||||||||||||||| |||||| ||||||||||||||||    
T  30605769 ctcagcaaactcctcgtttacactaaagacctaggacctaccc 30605727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 22404940 - 22404794
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| |||   ||||| |||| ||||||||||||||||||||||||||||||||| |||||| ||||||||||||    
T  22404940 cacaatgagtttgttgacccagttcggtgacaaacacacctgctctaggggctaccaagccaggaaggaaatccactagtatagtccttattcaatagct 22404841  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||    
T  22404840 ctcagcaaactcctcgtttacactatatgacctaggacctacccgta 22404794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 75 - 216
Target Start/End: Original strand, 26036794 - 26036936
Alignment:
Q  75 agtgagtttgttaacccagttcggtgcaacgt-cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctt 173  Q
    |||||||||||| ||||||||||||| ||    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||     
T  26036794 agtgagtttgttgacccagttcggtggaaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgttgtccttattctatagctctc 26036893  T
Q  174 agcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    ||||||||| |||||| |||||| |||||||||||||||||||    
T  26036894 agcaaactcatcgtttacactaaagacctaggacctacccgta 26036936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 26329392 - 26329247
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtgc-aacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||| |||||||||||||  ||   ||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  26329392 cacagtgagtttgttgacccagttcggtgataaacacacctactctgtgagctaccaagccaggaaggaaatccactggtgtagtccttattctatagct 26329293  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    || |||||||||||||||| |||||| |||||||||||||||||||    
T  26329292 ctcagcaaactcctcgtttacactaaagacctaggacctacccgta 26329247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 24189843 - 24189989
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||| ||| ||||||||| |||   ||| ||||||||||||||||||||| |||||||||| |||||||||||||  ||||||||||||    
T  24189843 cacagtgagtttgttgacctagttcggtgacaaacacacatactctgggggctaccaagccgggaaggaaattcactagtgtagtctttattcaatagct 24189942  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||    
T  24189943 ctcagcaaactcctcgtttacactatatgacctaggacctacccgta 24189989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 25105599 - 25105453
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||| ||||| ||||||||||||| |||   ||||||| || |||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  25105599 cacagtgagcttgttgacccagttcggtgacaagcgcacctacactaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagct 25105500  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
     | |||||||||||||||| ||||| |||||||||||||||||||||    
T  25105499 ttcagcaaactcctcgtttacactatatgacctaggacctacccgta 25105453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 25164692 - 25164546
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||| ||||| ||||||||||||| |||   ||||||| || |||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  25164692 cacagtgagcttgttgacccagttcggtgacaagcgcacctacactaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagct 25164593  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
     | |||||||||||||||| ||||| |||||||||||||||||||||    
T  25164592 ttcagcaaactcctcgtttacactatatgacctaggacctacccgta 25164546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 13735163 - 13735007
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    |||||||||  ||||||||||||||| ||||| ||||||| |||   ||||||||||||||| ||||||| ||||||||||||||| ||||||||||| |    
T  13735163 aaagtaaaagacacagtgagtttgttgacccacttcggtgacaaacacacctactctgggggttaccaagtcaggaaggaaatccattagtgtagtcctt 13735064  T
Q  160 attcaatagctcttagcaaactcctcgtttgcac-taatgacctaggacctacccgt 215  Q
    |||||| |||||| |||||||||||||||| ||| | ||||||||||||||||||||    
T  13735063 attcaaaagctctcagcaaactcctcgtttacactttatgacctaggacctacccgt 13735007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 71 - 216
Target Start/End: Complemental strand, 23420741 - 23420594
Alignment:
Q  71 gcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagc 169  Q
    ||||| |||||||| | ||||||||||||| |||   ||||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  23420741 gcacaatgagtttgctgacccagttcggtgacaaatacacctactctaagggctaccaagctaggaaggaaatccactagtgtagtccttattcaatagc 23420642  T
Q  170 tcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    ||| |||||||||||| ||| ||||| |||||||||||||||||||||    
T  23420641 tctcagcaaactcctcatttacactatatgacctaggacctacccgta 23420594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 13338573 - 13338713
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||||||||||||||||| |||   ||| |||||||||| |||||||||||||||||||||||||||||||| ||| ||||| ||| ||    
T  13338573 cacagtgagtttgttaacccagttcggtgacaaacacacatactctgggg-ctaccaagccaggaaggaaatccactagtgtaatccttattctataact 13338671  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacc 212  Q
    || |||||||||||||||| |||||| |||||||||| ||||    
T  13338672 ctcagcaaactcctcgtttacactaaagacctaggacatacc 13338713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 214
Target Start/End: Complemental strand, 22184786 - 22184633
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||  |||||| |||||||||| ||||||||||  |||| |||||||| ||| |||||||||||||||||||||||||||| |||| |||||||     
T  22184786 aaagtaaacggcacagagagtttgttatcccagttcggcacaac-tcacctacatctaggggctaccaagccaggaaggaaatccattagtctagtccga 22184688  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccg 214  Q
    |||| | |||||| |||||||||||||||| |||| | |||||| ||||||||||    
T  22184687 attctaaagctctcagcaaactcctcgtttacacttaagacctatgacctacccg 22184633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 123 - 216
Target Start/End: Complemental strand, 22246478 - 22246384
Alignment:
Q  123 taccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||||  ||||||||||||||||||||    
T  22246478 taccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatttgacctaggacctacccgta 22246384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 11204712 - 11204781
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagt 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11204712 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagt 11204781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 23623894 - 23624003
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 206  Q
    ||||||||||||||||||| || | |||||||||||||||||||||||||  ||||| |||||||| |||||||||||| ||| ||||||  ||||||||    
T  23623894 cacctactctgggggctactaacctaggaaggaaatccactagtgtagtcgttattctatagctctcagcaaactcctcatttacactaaatacctagga 23623993  T
Q  207 cctacccgta 216  Q
    ||||||||||    
T  23623994 cctacccgta 23624003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 77 - 212
Target Start/End: Original strand, 18221096 - 18221232
Alignment:
Q  77 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 175  Q
    |||||||||| | ||||||||||| |||   |||||||| ||||| ||||||||||| |||||||||||||||||||||||| ||||| |||||||| |     
T  18221096 tgagtttgttgatccagttcggtgacaaacacacctactttggggtctaccaagccaagaaggaaatccactagtgtagtccttattccatagctctcac 18221195  T
Q  176 caaactcctcgtttgcactaatgacctaggacctacc 212  Q
    |||||| ||||||| |||||| ||||||||| |||||    
T  18221196 caaacttctcgtttacactaaagacctaggagctacc 18221232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 215
Target Start/End: Complemental strand, 13942166 - 13942031
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 180  Q
    ||||||||| ||||||||| |||   ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| | || ||| |||||||    
T  13942166 ttgttaacctagttcggtgacaaacacacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaac 13942067  T
Q  181 tcctcgtttgc-actaatgacctaggacctacccgt 215  Q
    ||||||||| | ||| |  |||||||||||||||||    
T  13942066 tcctcgtttacaacttaaaacctaggacctacccgt 13942031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 22252162 - 22252074
Alignment:
Q  129 gccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    ||||||||||||||||||||||||||||| |||||||||||||| | |||||||||| ||| ||||| |||||||||||||||||||||    
T  22252162 gccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcatttacactatatgacctaggacctacccgta 22252074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 75 - 216
Target Start/End: Complemental strand, 20714912 - 20714769
Alignment:
Q  75 agtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctt 173  Q
    |||||||||||| ||| ||||||||| |||   ||||||||||| ||||||||||| |||| |||||||||||||||||||||| ||||| |  | |||     
T  20714912 agtgagtttgttgacctagttcggtgacaaacacacctactctgagggctaccaagtcaggtaggaaatccactagtgtagtccttattctaatgttctc 20714813  T
Q  174 agcaaactcctcgtttgc-actaatgacctaggacctacccgta 216  Q
    |||||||||||||||| | ||  | |||||||||||||||||||    
T  20714812 agcaaactcctcgtttacaacacaagacctaggacctacccgta 20714769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 17661598 - 17661503
Alignment:
Q  62 aagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    |||||||||||| || ||||||||||||||||||||||| |||   |||||||| |||||||||||||||| |||||||||| ||||||||| ||||    
T  17661598 aagtaaaatgcatag-gagtttgttaacccagttcggtgacaaacacacctactatgggggctaccaagcctggaaggaaattcactagtgttgtcc 17661503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 24394622 - 24394690
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||||| |||||||||||||||||||| |||||||||  ||||||||||||||||||||||||    
T  24394622 tttgttaacccatttcggtgcaacgtcacctacatctgggggcatccaagccaggaaggaaatccacta 24394690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 24117586 - 24117667
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtatt 162  Q
    ||||||||||||||||||| |||   | |||||||||| ||||||||||||||||| |||||||||||||||||||| ||||    
T  24117586 ttgttaacccagttcggtgacaaacacgcctactctggtggctaccaagccaggaatgaaatccactagtgtagtccttatt 24117667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 9522506 - 9522608
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| |||||||  |||||||||||||||||||  |||| |||| ||| | |||||||||||||| || ||||||||| |||||||||||||| |    
T  9522506 aaagtaaaaggcacagttggtttgttaacccagttcggcacaac-tcacttacatttgggggctaccaagtcaagaaggaaattcactagtgtagtcctt 9522604  T
Q  160 attc 163  Q
    ||||    
T  9522605 attc 9522608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 15116782 - 15116850
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||| ||||||||| ||||||| |||||||| |||||||||||||||| |||||||||||| |||||    
T  15116782 tttgttgacccagttcagtgcaacctcacctacgtctgggggctaccaagtcaggaaggaaattcacta 15116850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 72 - 168
Target Start/End: Complemental strand, 9422646 - 9422549
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatag 168  Q
    |||| |||||||||| ||| ||||||||| |||   ||||||| ||||||| || ||||| |||||||||||||||||||||| |||| ||||||||||    
T  9422646 cacaatgagtttgttgacctagttcggtgacaaacacacctacatctggggact-ccaagtcaggaaggaaatccactagtgttgtccttattcaatag 9422549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 20127026 - 20127093
Alignment:
Q  121 gctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 189  Q
    |||||||| | |||||||||||||||||||||| ||| ||||| | || ||| ||||||||||||||||    
T  20127026 gctaccaatctaggaaggaaatccactagtgtaatccttattcta-agttctcagcaaactcctcgttt 20127093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 20286717 - 20286825
Alignment:
Q  2 atgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagca-taaagtaaaatgcacagtgagtttgttaacccagttcggtg 100  Q
    ||||||||| | ||||||||||||  ||||||||| || ||||| ||||   ||| ||  ||||||||  |||||||  ||||||||||||||||||||     
T  20286717 atgttgaatgatatgtttcgaacattaagctaacagaagacaagtaaaacagaaaacacaaaagtaaatggcacagtcggtttgttaacccagttcggta 20286816  T
Q  101 caacgtcac 109  Q
    |||||||||    
T  20286817 caacgtcac 20286825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 157
Target Start/End: Original strand, 22979736 - 22979811
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    ||||||||||||||||||| |||   |||||||| ||||| ||||||||| |||||| |||| ||||||||||||||    
T  22979736 ttgttaacccagttcggtgacaaacacacctactatgggg-ctaccaagcaaggaagcaaatacactagtgtagtcc 22979811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 11756373 - 11756301
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgta 153  Q
    |||||||||||||||||  ||||| |||||||| | ||||||||| |||| |||||||||||| |||| |||||    
T  11756373 tttgttaacccagttcgacgcaac-tcacctacatttgggggctaacaaggcaggaaggaaattcacttgtgta 11756301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 19006706 - 19006639
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||||| |||||||||| |||||| || |||||||||| |||||  |||| ||||||||||||    
T  19006706 tttgttaacccatttcggtgcaatgtcaccgacatctgggggct-ccaagtaaggacggaaatccacta 19006639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 19663578 - 19663646
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||| ||||||||||||||||| |||||||| | || ||||||| |||||| ||| ||||| |||||    
T  19663578 tttgttgacccagttcggtgcaacctcacctacatatgcgggctacaaagccatgaatgaaattcacta 19663646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 187; Significance: 1e-101; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 23541154 - 23541372
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtg 100  Q
    ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||    
T  23541154 gatgttgaataaaatgttttgaacactaagctaacacaacacaagaaaaatgcaaagcataaagtaaatggcacagtgagtttgttaacccagttcggtg 23541253  T
Q  101 caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgac 200  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||    
T  23541254 caacgtcacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaaactcctcgtttgcactaaagac 23541353  T
Q  201 ctaggacctacccgtactg 219  Q
    |||||||||||||||||||    
T  23541354 ctaggacctacccgtactg 23541372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 19895052 - 19894834
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtg 100  Q
    |||||||||||||||||||||||||| |||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||||| |||||||||    
T  19895052 gatgttgaataaaatgtttcgaacactaagctaacacaagacaagaaaaatgtaaagcataaagtaaaaggcacagtgagtttgttaacctagttcggtg 19894953  T
Q  101 caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgac 200  Q
    ||||||||| |||||| || |||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||| |||||||||    
T  19894952 caacgtcacatactctaggagctaccaagccaggaacgaaatccactagtgtagttcgtattcaatagctctcagcaaactcctcgtttgaactaatgac 19894853  T
Q  201 ctaggacctacccgtactg 219  Q
    |||||||||||||||||||    
T  19894852 ctaggacctacccgtactg 19894834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 24143044 - 24143263
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggt 99  Q
    |||||||||| ||||||||||||||| ||||||||| || ||||| ||||  ||||||||||| |||||  |||||| ||||||||||||| ||||||||    
T  24143044 gatgttgaatgaaatgtttcgaacactaagctaacaaaagacaagtaaaacacaaagcataaaagtaaatggcacagagagtttgttaacctagttcggt 24143143  T
Q  100 gcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatga 199  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||    
T  24143144 gcaacgtcacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaaaatcctcgtttgcactaatga 24143243  T
Q  200 cctaggacctacccgtactg 219  Q
    ||||||||||||||||||||    
T  24143244 cctaggacctacccgtactg 24143263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 46741998 - 46741783
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggt 99  Q
    |||||||| | ||||||||||||||| ||||||||| || ||||||||||||||||||||||| |||||| ||||| |||||||||||||||| ||||||    
T  46741998 gatgttgagtgaaatgtttcgaacactaagctaaca-aagacaagaaaaatgcaaagcataaaagtaaaaggcacaatgagtttgttaacccatttcggt 46741900  T
Q  100 gcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatga 199  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||| ||||    
T  46741899 gcaacgtcacctactctgggggctaccaagccatgaaggaaatccactagtgtaatccttattcaatagctctcagcaaactcctcgtttgcacttatga 46741800  T
Q  200 cctaggacctacccgta 216  Q
    |||||||||||||||||    
T  46741799 cctaggacctacccgta 46741783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 2 - 219
Target Start/End: Complemental strand, 25354884 - 25354666
Alignment:
Q  2 atgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatg-cacagtgagtttgttaacccagttcggtg 100  Q
    ||||||||  |||||||| |||||| ||||||||| || ||||| ||||  |||||||||||   ||||| |||||||||||||||||||||||||||||    
T  25354884 atgttgaaagaaatgttttgaacactaagctaacaaaagacaagtaaaacacaaagcataaaagtaaatgacacagtgagtttgttaacccagttcggtg 25354785  T
Q  101 caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||| |||||||||||||||    
T  25354784 caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagttcgtattcaatatctctcagcaaactccttgtttgcactaatgac 25354685  T
Q  201 ctaggacctacccgtactg 219  Q
    |||||||||||||||||||    
T  25354684 ctaggacctacccgtactg 25354666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 11325395 - 11325176
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatg-cacagtgagtttgttaacccagttcgg 98  Q
    |||||||||| ||||||||||||||| ||||||||| || ||||| |||| |||||||||||| |||||| | ||||||||| ||||||||||  ||| |    
T  11325395 gatgttgaatgaaatgtttcgaacactaagctaaca-aagacaagtaaaacgcaaagcataaatgtaaaaagacacagtgagattgttaacccgattccg 11325297  T
Q  99 tgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-at 197  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||| ||    
T  11325296 tgcaacgtcacctgctctggaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttgcactatat 11325197  T
Q  198 gacctaggacctacccgtact 218  Q
    |||||||||||||||||||||    
T  11325196 gacctaggacctacccgtact 11325176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 22554879 - 22555100
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatg-cacagtgagtttgttaacccagttcgg 98  Q
    |||||||||| ||||||||| ||||| ||||||||| || ||||| |||| |||||  ||||| |||||| | |||||||||||||||||||||||||||    
T  22554879 gatgttgaatgaaatgtttcaaacactaagctaaca-aagacaagtaaaacgcaaatgataaaagtaaaaagacacagtgagtttgttaacccagttcgg 22554977  T
Q  99 tgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-at 197  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||| ||    
T  22554978 tgcaacgtcacctactctgaaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtatgcactatat 22555077  T
Q  198 -gacctaggacctacccgtactg 219  Q
     ||||||||||||| ||||||||    
T  22555078 ggacctaggacctatccgtactg 22555100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 76 - 215
Target Start/End: Original strand, 21478093 - 21478233
Alignment:
Q  76 gtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 175  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||| |||||| ||    
T  21478093 gtgagtttgttaacccagttcggtgcaacgtcacctactctggaggctaccaagccaggaaggaaatacactagtgtagtccttattcaaaagctctcag 21478192  T
Q  176 caaactcctcgtttgcac-taatgacctaggacctacccgt 215  Q
    |||||||||||||| ||| | ||||||||||||||||||||    
T  21478193 caaactcctcgtttacactttatgacctaggacctacccgt 21478233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 72 - 213
Target Start/End: Complemental strand, 15700490 - 15700347
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactct-gggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagc 169  Q
    ||||||||||||||| ||||||||||||| |||   |||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  15700490 cacagtgagtttgttgacccagttcggtgacaaacacacctactcttgggggctaccaagccaggaaggaaatccactagtgtagtccttattctatagc 15700391  T
Q  170 tcttagcaaactcctcgtttgcactaatgacctaggacctaccc 213  Q
    | | |||||||||||||||| |||||| ||||||||||||||||    
T  15700390 tttcagcaaactcctcgtttacactaaagacctaggacctaccc 15700347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 73 - 212
Target Start/End: Original strand, 11905077 - 11905215
Alignment:
Q  73 acagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctct 172  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||  ||||||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  11905077 acagtgagtttgttaacccagttcggtgcaacgtcacctactttggggt-taccaagtcaggaaggaaatccactagtgcagtccttattcaatagctct 11905175  T
Q  173 tagcaaactcctcgtttgcactaatgacctaggacctacc 212  Q
     || ||||| ||||||| |||||| |||||| ||| ||||    
T  11905176 cagtaaacttctcgtttacactaaagacctatgacttacc 11905215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 16383907 - 16384017
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 205  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||| ||||||||||    
T  16383907 cacctactctgggggcttccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttacactatatgacctagg 16384006  T
Q  206 acctacccgta 216  Q
    |||||||||||    
T  16384007 acctacccgta 16384017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 28019285 - 28019431
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| |||   ||| | |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  28019285 cacaatgagtttgttgacccagttcggtgacaaacacacatgctctgggggctaccaagccaagaaggaaatccactagtgtagtccttattcaatagct 28019384  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||||||||||| ||||| |||||||||||| ||||||||    
T  28019385 ctcagcaaactcctcgtttacactatatgacctaggacatacccgta 28019431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 77 - 216
Target Start/End: Original strand, 10190872 - 10191013
Alignment:
Q  77 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 175  Q
    |||||||||| ||||||||||||| |||   |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| ||    
T  10190872 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaccagtgtagtccttattcaatagctctaag 10190971  T
Q  176 caaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    |||||||||||||| ||||| ||||| |||||| ||| ||||    
T  10190972 caaactcctcgtttacactatatgacataggacttactcgta 10191013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 25116804 - 25116952
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctac--caagccaggaaggaaatccactagtgtagtccgtattcaatag 168  Q
    |||| ||||||| || ||||||||||||| |||   |||||||||||||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  25116804 cacaatgagtttattgacccagttcggtgacaaacacacctactctgggggctacaccaagccaggaaggaaatccactagtgtagtccttattcaatag 25116903  T
Q  169 ctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    |||| |||||||| ||||||| ||||| |||||||||||||||||||||    
T  25116904 ctctcagcaaacttctcgtttacactatatgacctaggacctacccgta 25116952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 73 - 215
Target Start/End: Complemental strand, 13399481 - 13399338
Alignment:
Q  73 acagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 171  Q
    |||||||||||||| ||||||||||||| |||   |||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||| | |||||    
T  13399481 acagtgagtttgttgacccagttcggtgacaaacacacctactctaggggctaccaagccaggaagaaaatccactagtgtagtccttattctaaagctc 13399382  T
Q  172 ttagcaaactcctcgtttgcactaatgacctaggacctacccgt 215  Q
    | |||||||||||||||| |||| | ||| ||||||||||||||    
T  13399381 tcagcaaactcctcgtttacacttaagacttaggacctacccgt 13399338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 216
Target Start/End: Original strand, 9068933 - 9069071
Alignment:
Q  79 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 177  Q
    |||||||||||||||||||||  |||   |||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| || ||||| ||||    
T  9068933 agtttgttaacccagttcggtaacaaacacacctactctggaggctaccaagcgaggaaggaaatccactagtgtagtccttattctattgctctcagca 9069032  T
Q  178 aactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||||||||||| |||||| || ||||||||||||||||    
T  9069033 aactcctcgtttacactaaagatctaggacctacccgta 9069071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 23400325 - 23400227
Alignment:
Q  119 gggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||    
T  23400325 gggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgta 23400227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 33899167 - 33899021
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| |||   |||||||||| |||||||||||| ||||||| ||||||||| |||||||||  |||||||||||    
T  33899167 cacaatgagtttgttgacccagttcggtgacaaacacacctactctaggggctaccaagtcaggaagaaaatccactggtgtagtcctcattcaatagct 33899068  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    ||||||||||| ||||||| ||||| |||||||||||||||||||||    
T  33899067 cttagcaaacttctcgtttacactatatgacctaggacctacccgta 33899021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 72 - 215
Target Start/End: Original strand, 8163763 - 8163910
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggcta-----ccaagccaggaaggaaatccactagtgtagtccgtattcaat 166  Q
    |||||||||||||||||||||||||||||||||||||||||||||  ||||||     |||||||||||||||||| |||||||| ||||| |||||||     
T  8163763 cacagtgagtttgttaacccagttcggtgcaacgtcacctactct-agggctaccaagccaagccaggaaggaaattcactagtgcagtccttattcaaa 8163861  T
Q  167 agctcttagcaaactcctcgtttgcactaatgacctaggacctacccgt 215  Q
    |||||  |||||||||||||||| |  | ||||||||||||||||||||    
T  8163862 agctcccagcaaactcctcgtttacctttatgacctaggacctacccgt 8163910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 18618258 - 18618150
Alignment:
Q  108 acctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagga 206  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||| | |||||||||||||| ||||| |||||||||||    
T  18618258 acctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatatctctcaacaaactcctcgtttacactatatgacctagga 18618159  T
Q  207 cctacccgt 215  Q
    | |||||||    
T  18618158 catacccgt 18618150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 33745933 - 33746089
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| |||||   ||||||||||| |||||||||| |||   |||||||| ||| ||||||||||| |||||||||||||||||||||||||| |    
T  33745933 aaagtaaaaggcacaacaagtttgttaacacagttcggtgacaaaaacacctactatggaggctaccaagctaggaaggaaatccactagtgtagtcctt 33746032  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||  |||||||| || ||| ||||||||| |||||| |||||||||||||||||||    
T  33746033 attttatagctctcagtaaattcctcgtttacactaaagacctaggacctacccgta 33746089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 73 - 216
Target Start/End: Original strand, 10724241 - 10724385
Alignment:
Q  73 acagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 171  Q
    |||||||||||||| ||| ||||||||| |||   |||||||| |||||||||| |||||||||||||||| |||||||||||||| ||||| |||||||    
T  10724241 acagtgagtttgttgacctagttcggtgacaaacacacctactttgggggctacaaagccaggaaggaaattcactagtgtagtccttattctatagctc 10724340  T
Q  172 ttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    | |||||||||||| ||| || ||| ||||||  |||||||||||    
T  10724341 tcagcaaactcctcatttacattaaagacctaaaacctacccgta 10724385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 73 - 216
Target Start/End: Original strand, 10938010 - 10938154
Alignment:
Q  73 acagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 171  Q
    |||||||||||||| ||| ||||||||| |||   |||||||| |||||||||| |||||||||||||||| |||||||||||||| ||||| |||||||    
T  10938010 acagtgagtttgttgacctagttcggtgacaaacacacctactttgggggctacaaagccaggaaggaaattcactagtgtagtccttattctatagctc 10938109  T
Q  172 ttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    | |||||||||||| ||| || ||| ||||||  |||||||||||    
T  10938110 tcagcaaactcctcatttacattaaagacctaaaacctacccgta 10938154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 211
Target Start/End: Original strand, 19659463 - 19659560
Alignment:
Q  115 ctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcac-taatgacctaggacctac 211  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||| | ||||||||||||||||    
T  19659463 ctgggggccaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaggacctac 19659560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 10721954 - 10722109
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| | | || |||||| ||||||||||||||  |||| |||||||| ||| |||| |||||| |||||||||||||| ||||||||||||| |    
T  10721954 aaagtaaaaggtatagagagtttattaacccagttcggcacaac-tcacctacatctaggggttaccaatccaggaaggaaatctactagtgtagtcctt 10722052  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||| | |||||| | |||||||||||||| |||| | |||||||||||||||||||    
T  10722053 attctaaagctctcaacaaactcctcgtttacacttaagacctaggacctacccgta 10722109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 10935723 - 10935878
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| | | || |||||| ||||||||||||||  |||| |||||||| ||| |||| |||||| |||||||||||||| ||||||||||||| |    
T  10935723 aaagtaaaaggtatagagagtttattaacccagttcggcacaac-tcacctacatctaggggttaccaatccaggaaggaaatctactagtgtagtcctt 10935821  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||| | |||||| | |||||||||||||| |||| | |||||||||||||||||||    
T  10935822 attctaaagctctcaacaaactcctcgtttacacttaagacctaggacctacccgta 10935878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 15162677 - 15162521
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    |||||||||  |||| | |||||||| ||| ||||||||| |||   ||||||||||||||||| |||| ||| |||||||||||||||||||||||| |    
T  15162677 aaagtaaaagacacaataagtttgttgacctagttcggtgacaaacacacctactctgggggctgccaacccaagaaggaaatccactagtgtagtcctt 15162578  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||| ||| |||| | ||||||| |||||| |||||| |||| || |||||||||||    
T  15162577 attctataactctcaacaaactcttcgtttacactaaagaccgagaacctacccgta 15162521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 160
Target Start/End: Original strand, 33737973 - 33738053
Alignment:
Q  81 tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    |||||||||||||||||||| |||   |||||||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  33737973 tttgttaacccagttcggtgacaaacacacctactatggaggctaccaagccaggaaggaaatccactagtgtagtccgta 33738053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 19183809 - 19183722
Alignment:
Q  121 gctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacc 208  Q
    ||||||||||||||||||||||||||||||||| || |||||| |||||||| | |||||| || |||| |||||| |||||||||||    
T  19183809 gctaccaagccaggaaggaaatccactagtgtattctgtattctatagctctcaacaaacttcttgtttacactaaagacctaggacc 19183722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 80 - 216
Target Start/End: Original strand, 50907840 - 50907977
Alignment:
Q  80 gtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaa 178  Q
    |||||||||| |||||||||| |||   ||||||||||| ||||||||||| ||||||| ||||||||||||||||||| ||||| | || | | |||||    
T  50907840 gtttgttaactcagttcggtgacaaacacacctactctgagggctaccaagtcaggaagaaaatccactagtgtagtccttattcta-agttatcagcaa 50907938  T
Q  179 actcctcgtttgc-actaatgacctaggacctacccgta 216  Q
    ||||||||||| | |||   |||||||||||||||||||    
T  50907939 actcctcgtttacaactctagacctaggacctacccgta 50907977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 13268835 - 13268904
Alignment:
Q  80 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||| ||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||||||    
T  13268835 gtttgttcacccagttcggtgcaacttcacctacatctgggggctaccaagtcaggaaggaaatccacta 13268904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 41785404 - 41785524
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||||||| || ||||||||| ||||||||| ||| |||   ||| ||||  |||||||||||||||| |||||||||||||||||||||||| |    
T  41785404 aaagtaaaatgcatagagagtttgttgacccagttctgtgacaaacacacatactacgggggctaccaagccaagaaggaaatccactagtgtagtccct 41785503  T
Q  160 attcaatagctcttagcaaac 180  Q
    |||| | || ||| |||||||    
T  41785504 attctaaagttctcagcaaac 41785524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 32861664 - 32861746
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 189  Q
    |||||||||| |||||||||||| ||||||| ||||||||||||||||||| ||||| | || ||| | ||||||||||||||    
T  32861664 cacctactctaggggctaccaagtcaggaagaaaatccactagtgtagtccttattctaaagttctcaacaaactcctcgttt 32861746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 11865283 - 11865215
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||||||||||||||||||||  |||| |||||||||||||||||||||||| |||| |||||    
T  11865283 tttgttaacccagttcggtgcaacgtcttctacgtctgggggctaccaagccaggaagaaaattcacta 11865215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 10198439 - 10198285
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    |||||||| |||||||   | ||||||||| ||||||||| |||   |||||||||| ||| ||||||||||||||||||||||||| |||||||||| |    
T  10198439 aaagtaaagtgcacaggaggattgttaacctagttcggtgacaaacacacctactctaggg-ctaccaagccaggaaggaaatccaccagtgtagtcctt 10198341  T
Q  160 attcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgt 215  Q
    |||| | || ||| ||||||||||  |||| | |||   ||||||||||||||||||    
T  10198340 attcta-agttctcagcaaactccaagtttacaactctagacctaggacctacccgt 10198285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 24608696 - 24608764
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||  | |||||||| |||||    
T  24608696 tttgttaacccagttcggtgcaacgtcacctacgtctggggactaccaagcttgaaaggaaattcacta 24608764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 2679839 - 2679916
Alignment:
Q  81 tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    |||||||||||||| ||||| |||   |||||||||||||||| ||||||  ||||||||||||||||| ||||||||    
T  2679839 tttgttaacccagtacggtgacaaacacacctactctgggggcaaccaagttaggaaggaaatccactattgtagtcc 2679916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 184
Target Start/End: Complemental strand, 16655481 - 16655405
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcct 184  Q
    |||||||||| ||||||| ||||||| |||||||||||||||| ||||||| ||||| | || ||| |||||||||||    
T  16655481 cacctactctaggggctaacaagccaagaaggaaatccactagggtagtccttattcta-agttctcagcaaactcct 16655405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 17871665 - 17871604
Alignment:
Q  88 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||||||||||| |||||||| |||| ||||||||||| |||||||||||| |||||    
T  17871665 acccagttcggtgcaacttcacctacatctgagggctaccaagtcaggaaggaaattcacta 17871604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 11289525 - 11289438
Alignment:
Q  62 aagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactag 149  Q
    |||||||| |||||  | ||||||||||||||||||||||||||||||| || ||| |||| || |||||||||||| |||| ||||||    
T  11289525 aagtaaaaggcacatggtgtttgttaacccagttcggtgcaacgtcaccaacgtct-ggggttaacaagccaggaagaaaattcactag 11289438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 78 - 148
Target Start/End: Original strand, 13875961 - 13876031
Alignment:
Q  78 gagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||||||| |||| |||||||| | ||||||    ||||||||||||||||||||||||| |||||    
T  13875961 gagtttgttaacctagtttggtgcaacttaacctacatatggggctaccaagccaggaaggaaattcacta 13876031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 19564825 - 19564893
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacct-actctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||||||||| |||||||||||| || | ||| | || |||||||||| |||||||||||||||    
T  19564825 tttgttaacccagtttggtgcaacgtcatctaagtctagaggttaccaagccaagaaggaaatccacta 19564893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 175; Significance: 2e-94; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 45599577 - 45599359
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtg 100  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||| || |||||||    
T  45599577 gatgttgaataaaatgtttcgaacactaagctaacacaagacaagaaaaatgcaaagcataaagtaaaaggcacagtgagtttgttaactcaattcggtg 45599478  T
Q  101 caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgac 200  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| | |||||||||| ||||||||||||||    
T  45599477 caacgtcacctactctcggggctaccaagccaggaaggaaatccactaatgtagtccgtattcaatagttctcaacaaactcctcatttgcactaatgac 45599378  T
Q  201 ctaggacctacccgtactg 219  Q
    |||||||||||||||||||    
T  45599377 ctaggacctacccgtactg 45599359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 8 - 219
Target Start/End: Complemental strand, 40313464 - 40313253
Alignment:
Q  8 aataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtc 107  Q
    |||||||| |||||||||  |||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||     
T  40313464 aataaaatatttcgaacatgaagctaacacaagacaaggaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcagtgcaacgtt 40313365  T
Q  108 acctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggac 207  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  40313364 acctactcagggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaaactcctcgtttgcactaatgacctaggac 40313265  T
Q  208 ctacccgtactg 219  Q
    ||| ||||||||    
T  40313264 ctagccgtactg 40313253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 75 - 219
Target Start/End: Original strand, 33062370 - 33062515
Alignment:
Q  75 agtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctta 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  33062370 agtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccagaaaggaaatccactagtgtagtccttattcaatagctctta 33062469  T
Q  175 gcaaactcctcgtttgcacta-atgacctaggacctacccgtactg 219  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||    
T  33062470 gcaaactcctcgtttgcactatatgacctaggacctacccttactg 33062515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 17038218 - 17038369
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    |||||||||  |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  17038218 aaagtaaaaaacacaggaagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccactagtgtagtcctta 17038316  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctaccc 213  Q
    |||  ||||||| |||||||||||||||| |||||| ||| ||||||||||||    
T  17038317 ttctctagctctcagcaaactcctcgtttacactaaagacataggacctaccc 17038369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 26972578 - 26972432
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| |||   ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  26972578 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccagtaaggaaatccactagtgtagtccttattcaatagct 26972479  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||    
T  26972478 ctcagcaaactcctcgtttacactatatgacctaggacctacccgta 26972432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 61 - 219
Target Start/End: Complemental strand, 52437008 - 52436849
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||| ||||||||||||  ||||| ||    
T  52437008 aaagtaaaagtcacagtgagtttgttaacccagttcggtgcaacgtcacctactctggaggctaccgagtcaggaagaaaatccactagtacagtcctta 52436909  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactg 219  Q
    |||||||||| | || |||||||||||| |||||| ||||| ||||| ||||||||||||    
T  52436908 ttcaatagctttcagtaaactcctcgttcgcactatatgacataggatctacccgtactg 52436849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 4246016 - 4246158
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| |||   ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  4246016 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagacaggaaggaaatccactagtgtagtccttattcaatagct 4246115  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacc 212  Q
    || |||||||||||||||| ||||| |||||||||||||||||    
T  4246116 ctcagcaaactcctcgtttacactatatgacctaggacctacc 4246158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 101 - 219
Target Start/End: Original strand, 17012013 - 17012132
Alignment:
Q  101 caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atga 199  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| | |||||||||||||||||||||| ||||    
T  17012013 caacatcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaacagctttcagcaaactcctcgtttgcactatatga 17012112  T
Q  200 cctaggacctacccgtactg 219  Q
    ||||||||||||| ||||||    
T  17012113 cctaggacctacctgtactg 17012132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 72 - 215
Target Start/End: Complemental strand, 17851550 - 17851406
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||| ||| ||||||||| |||   ||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||| ||||||    
T  17851550 cacagtgagtttgttgacctagttcggtgacaaacacacctactctgggggctactaagccaagaaggaaatccactagtgtagtccttattctatagct 17851451  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacccgt 215  Q
    || |||||||||||||||| |||||| ||||||||||||| ||||    
T  17851450 ctcagcaaactcctcgtttacactaaagacctaggacctagccgt 17851406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 47941527 - 47941373
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| ||||||| |||||||||||||| |||||  |||| |||||||| |||||| ||||| ||| || |||||||||||||||||||||||| |    
T  47941527 aaagtaaaaggcacagtaagtttgttaacccaattcggcacaac-tcacctacatctgggagctacaaagtcaagaaggaaatccactagtgtagtcctt 47941429  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgt 215  Q
    |||| ||||||||||||||||||||||||| |||||| ||| ||||||||||||||    
T  47941428 attctatagctcttagcaaactcctcgtttacactaaagacataggacctacccgt 47941373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 11668040 - 11667895
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtgc-aacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||| |||||||||| ||  ||   ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||    
T  11668040 cacagtgagtttgttgacccagttcgatgagaaacacacctactctgggggctaccaagccaggaaggaaatctactagtgtagtccttattctatagct 11667941  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    || |||||||||||||||| |||||| ||||  |||||||||||||    
T  11667940 ctcagcaaactcctcgtttacactaaagaccatggacctacccgta 11667895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 76 - 216
Target Start/End: Original strand, 1973298 - 1973439
Alignment:
Q  76 gtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctta 174  Q
    ||||||||||| ||||||||||||| |||   | ||||||||||||| ||||||| ||||||||||||||||||||||||||| ||||| |||||||| |    
T  1973298 gtgagtttgttgacccagttcggtgacaaacactcctactctgggggataccaagtcaggaaggaaatccactagtgtagtccttattctatagctctca 1973397  T
Q  175 gcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    | ||||||||| ||| |||||| |||||||||||||||||||    
T  1973398 gaaaactcctcatttacactaaagacctaggacctacccgta 1973439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 12753031 - 12753184
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgc-aacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| |||||   ||||||||||||||||||||||  ||   |||||||||||| |||||||||||||||||| ||||||||||| ||||||| |    
T  12753031 aaagtaaaaggcacaacaagtttgttaacccagttcggtgagaaacacacctactctggaggctaccaagccaggaagtaaatccactagcgtagtcctt 12753130  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctaccc 213  Q
    |||| |||||||| ||| |||||||||||| |||||| ||||||||||||||||    
T  12753131 attctatagctctcagcgaactcctcgtttacactaaagacctaggacctaccc 12753184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 23478123 - 23477967
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||  |||||||||||||||| ||| ||||| ||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  23478123 aaagtaaatggcacagtgagtttgttgacctagttcagtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcctt 23478024  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||| |||||||| |||||||  || |||| || ||| ||||||| |||||||||||    
T  23478023 attctatagctctcagcaaacaacttgtttacaataaagacctagaacctacccgta 23477967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 20841394 - 20841302
Alignment:
Q  119 gggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctac 211  Q
    ||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||||||||||||| |||||| ||||||||||||||    
T  20841394 gggctaccaagccaggaaggaaatccactagtgtagtccttattttatagctcttagcaaactcctcgtttacactaaagacctaggacctac 20841302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 14745960 - 14745815
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||| ||||||||| |||||| |||||| |||   |||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  14745960 cacagcgagtttgttgacccagctcggtgacaaacacaccaactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaatagct 14745861  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||| ||||||| ||||| ||||| || ||||||||||||    
T  14745860 ctcagcaaactactcgtttacactatatgacata-gacctacccgta 14745815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 118 - 216
Target Start/End: Original strand, 13165422 - 13165521
Alignment:
Q  118 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    ||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||||||||| || || |||||||||||||||||||||    
T  13165422 ggggctaccaagctaggaaggaaatccactagtgtagtccttattcaatagctctcagcatactcctcgtttacagtatatgacctaggacctacccgta 13165521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 82 - 215
Target Start/End: Complemental strand, 17379790 - 17379656
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 180  Q
    ||||||||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | |  ||| |||||||    
T  17379790 ttgttaacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcta-atttctcagcaaac 17379692  T
Q  181 tcctcgtttgc-actaatgacctaggacctacccgt 215  Q
    ||||||||| | |||   ||||||||||||||||||    
T  17379691 tcctcgtttacaactctagacctaggacctacccgt 17379656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 17355998 - 17355891
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 180  Q
    ||||||||||||||||||| |||   ||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||| | |  ||| |||||||    
T  17355998 ttgttaacccagttcggtgacaaacacacctactctgggggctaccaagcctggaaggaaatccaccagtgtagtccttattcta-atttctcagcaaac 17355900  T
Q  181 tcctcgttt 189  Q
    |||||||||    
T  17355899 tcctcgttt 17355891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 71 - 163
Target Start/End: Complemental strand, 15804289 - 15804196
Alignment:
Q  71 gcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 163  Q
    |||||| ||||||||||||||||||| ||| |||   |||||||| |||||||||||||||||||||| |||| |||||||||||||| |||||    
T  15804289 gcacagcgagtttgttaacccagttcagtgacaaacacacctactatgggggctaccaagccaggaagaaaattcactagtgtagtccttattc 15804196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 153
Target Start/End: Complemental strand, 18390273 - 18390200
Alignment:
Q  81 tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgta 153  Q
    |||||||||||||||||||| |||   ||||||||||||||||||||||||||| |||||||||||||||||||    
T  18390273 tttgttaacccagttcggtgacaaacacacctactctgggggctaccaagccagtaaggaaatccactagtgta 18390200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 49086761 - 49086692
Alignment:
Q  80 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| ||||| |||||    
T  49086761 gtttgttaacccagttcggtgcaacgtcacctacatgtgggggctaccaagccaggaaagaaattcacta 49086692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 72 - 150
Target Start/End: Complemental strand, 20859720 - 20859641
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagt 150  Q
    |||| ||| |||||| ||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||    
T  20859720 cacaatgattttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagt 20859641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 111 - 215
Target Start/End: Complemental strand, 51472230 - 51472126
Alignment:
Q  111 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacct 209  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||| ||||| | || ||| | |||||||||||||| | |||   ||||||||||||    
T  51472230 tactctgggggctaccaaaccaagaaggaaatccactagtgtagtccttattcta-agttctcatcaaactcctcgtttacaactctagacctaggacct 51472132  T
Q  210 acccgt 215  Q
    ||||||    
T  51472131 acccgt 51472126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 10340345 - 10340249
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgt-cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 156  Q
    ||||||||| ||||||  |||||||| ||||||||||||   | || ||||||||||||||||||| ||| |||||||||||||||||| |||||||    
T  10340345 aaagtaaaaggcacagaaagtttgttgacccagttcggtaacaagtacacctactctgggggctactaagtcaggaaggaaatccactattgtagtc 10340249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 50057518 - 50057579
Alignment:
Q  88 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||| ||||||| |||||||| |||||||||||||||| ||||||||||||||||||    
T  50057518 acccagttcagtgcaacttcacctacatctgggggctaccaagtcaggaaggaaatccacta 50057579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 64 - 153
Target Start/End: Complemental strand, 41330987 - 41330897
Alignment:
Q  64 gtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgta 153  Q
    |||||| |||||  ||||||||| ||||||||||||| |||   |||||||| |||||||||| ||||||||||| ||| |||||||||||    
T  41330987 gtaaaaggcacaaagagtttgttgacccagttcggtgacaaacacacctactttgggggctactaagccaggaagtaaaaccactagtgta 41330897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 82 - 162
Target Start/End: Original strand, 8281911 - 8281992
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtatt 162  Q
    ||||||||| ||||||||| |||   ||||||||| || ||| |||||||||||||||||| |||||| |||||||| ||||    
T  8281911 ttgttaacctagttcggtgacaaacacacctactccggaggcgaccaagccaggaaggaaacccactattgtagtccttatt 8281992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 23600584 - 23600515
Alignment:
Q  80 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||||| ||||||||||||| |||||||| ||||| |||||||||| || |||| |||| |||||    
T  23600584 gtttgttaacctagttcggtgcaacttcacctacatctggaggctaccaaggcaagaagaaaattcacta 23600515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 25123330 - 25123398
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||| || ||||||| |||||||||||| | |||||||   ||||||| |||||||||||||||    
T  25123330 tttgttaacacaattcggtgtaacgtcacctacatgtgggggcattcaagccatgaaggaaatccacta 25123398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 171; Significance: 6e-92; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 16137830 - 16137612
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtg 100  Q
    |||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| | ||    
T  16137830 gatgttgaatgaaatgtttcgaacactaagctaacacaagacaagaaaaatgcaaagcataaagtaaaaggcacaatgagtttgttaacccagtttgatg 16137731  T
Q  101 caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgac 200  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| |||||||    
T  16137730 caacgtcacctactctgagggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgcagtaatgac 16137631  T
Q  201 ctaggacctacccgtactg 219  Q
    |||||| ||||||||||||    
T  16137630 ctaggatctacccgtactg 16137612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 2 - 219
Target Start/End: Original strand, 15038257 - 15038476
Alignment:
Q  2 atgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaat--gcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggt 99  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||||   ||||||||  ||||||||  |||||||||||||||||||||||| |||    
T  15038257 atgttgaataaaatgtttcgaacactaagctaacacaagacaagaaaaaaaagcaaagcacgaagtaaaagacacagtgagtttgttaacccagtttggt 15038356  T
Q  100 gcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatga 199  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||    
T  15038357 gcaacgtcacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccgtattcaatagctctcaggaaactcctcgtttgcacaaatga 15038456  T
Q  200 cctaggacctacccgtactg 219  Q
    ||||||||| ||||||||||    
T  15038457 cctaggaccaacccgtactg 15038476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 19215864 - 19216081
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtg 100  Q
    |||||||||||||||||||||||||| |||||||||||| |||||| |||||||| ||  ||||||||| ||||| ||||||||||||||||||||||||    
T  19215864 gatgttgaataaaatgtttcgaacactaagctaacacaagacaagagaaatgcaacgcgaaaagtaaaaggcacattgagtttgttaacccagttcggtg 19215963  T
Q  101 caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atga 199  Q
    ||||||||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||| ||||    
T  19215964 caacgtcacctactct-agggataccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaaactcctcgttttcactatatga 19216062  T
Q  200 cctaggacctacccgtact 218  Q
    |||||||||||||||||||    
T  19216063 cctaggacctacccgtact 19216081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 9384594 - 9384743
Alignment:
Q  71 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||| |||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  9384594 gcacagtgagtttgttaacccagttcggtacaacgtcgcctattctggtggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagct 9384693  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactg 219  Q
    || |||||||||||||||||||||| ||||||||||||||||||||||||    
T  9384694 ctcagcaaactcctcgtttgcactatatgacctaggacctacccgtactg 9384743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 71 - 219
Target Start/End: Complemental strand, 15003341 - 15003192
Alignment:
Q  71 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  15003341 gcacagtgagttcgttaacccagttcggtgcaatgtcacctactctggtggataccaagccatgaaggaaatccactagtgtagtccttattcaatagct 15003242  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactg 219  Q
    || ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  15003241 ctcagcaaactccttgtttgcactatatgacctaggacctacccgtactg 15003192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 15007524 - 15007370
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    |||| |||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||  |||||||||| |||||||||||||||||||||| | ||    
T  15007524 aaagaaaaaggcacagtgagtttgttaacccagttcgatgcaaagtcacctactctgggga-taccaagccatgaaggaaatccactagtgtagtactta 15007426  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgt 215  Q
    |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  15007425 ttcaatagctctcagcaaactcctcgtttgcactatatgacctaggacctacccgt 15007370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 16309545 - 16309392
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    ||||||||| ||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||    
T  16309545 aaagtaaaaggcacaggaagtttgttaacccagttcagtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccactagtatagtcctta 16309447  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgt 215  Q
    |||  ||||||| |||||||||||||||| |||||| ||||||||||||||||||    
T  16309446 ttctctagctctcagcaaactcctcgtttacactaaagacctaggacctacccgt 16309392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 71 - 218
Target Start/End: Original strand, 20003117 - 20003265
Alignment:
Q  71 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||| ||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||| | ||||||||||||    
T  20003117 gcacaatgagtttgtgaacccagttcggtgcaacgtcacctactttaggggctaccaagccaggaaggaaatcaactagtgtagttcttattcaatagct 20003216  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtact 218  Q
    || || |||| |||||||||||||| |||||||||||||||||||||||    
T  20003217 ctcaggaaacccctcgtttgcactatatgacctaggacctacccgtact 20003265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 72 - 215
Target Start/End: Original strand, 20558283 - 20558427
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 171  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| || ||||| | | |||    
T  20558283 cacagtgagtttgttaacccagttcggtgcaacgtcacctagtctggaggctaccaagccaggaaggaaatccactagtgtagcccttattctaaaactc 20558382  T
Q  172 ttagcaaactcctcgtttgcac-taatgacctaggacctacccgt 215  Q
    | |||||||||||||||| ||| | ||||||||||||||||||||    
T  20558383 tcagcaaactcctcgtttacactttatgacctaggacctacccgt 20558427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 78 - 219
Target Start/End: Complemental strand, 12444891 - 12444752
Alignment:
Q  78 gagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagc 176  Q
    ||||||||||||||||||||||| ||||  |||||||||||| ||||||||||| ||||||||| |||||||||||||||||||||||| |||||| |||    
T  12444891 gagtttgttaacccagttcggtgacaaca-cacctactctggaggctaccaagctaggaaggaactccactagtgtagtccgtattcaaaagctctcagc 12444793  T
Q  177 aaactcctcgtttgcactaatgacctaggacctacccgtactg 219  Q
    |||  || |||||||||||||||||||||||||||||||||||    
T  12444792 aaa--ccacgtttgcactaatgacctaggacctacccgtactg 12444752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 33665774 - 33665920
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||| ||||||||| |||   ||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  33665774 cacaatgagtttgttgacctagttcggtgacaaacacacctactctgggggctactaagccaggaaggaaatccactagtgtagtccttattcaatagct 33665873  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||||||||||| ||||| ||||| |||||||||||||||    
T  33665874 ctcagcaaactcctcgtttacactatatgacataggacctacccgta 33665920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 34657329 - 34657184
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||| |||||||||||||||||||||  |||| |||||||| ||| ||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  34657329 cacagagagtttgttaacccagttcggcacaac-tcacctacatctaggggctaccaagccaagaaggaaatccactagtgtagtccttattcaatagct 34657231  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||||||||||| ||||| ||||||||||||| |||||||    
T  34657230 ctcagcaaactcctcgtttacactatatgacctaggaccaacccgta 34657184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 77 - 213
Target Start/End: Complemental strand, 15897847 - 15897710
Alignment:
Q  77 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 175  Q
    |||||||||| ||||||||||||| |||   |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||    
T  15897847 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccactagtgtagtccttattctatagctcttag 15897748  T
Q  176 caaactcctcgtttgcactaatgacctaggacctaccc 213  Q
    |||||||||| ||| || ||| ||||||||||||||||    
T  15897747 caaactcctcatttacaataacgacctaggacctaccc 15897710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 77 - 216
Target Start/End: Original strand, 17855180 - 17855321
Alignment:
Q  77 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 175  Q
    |||||||||| |||||| |||||| |||   |||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  17855180 tgagtttgttgacccagatcggtgacaaacacacctactctggaggctatcaagccaggaaggaaatccactagtgtagtccttattcaatagctctcag 17855279  T
Q  176 caaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  17855280 caaactcctcgtttacactatatgacctaggacctacccgta 17855321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 77 - 216
Target Start/End: Complemental strand, 20470376 - 20470236
Alignment:
Q  77 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 175  Q
    |||||||||| ||||||||||| | |||   |||||||||||| |||||||||||||||||||||||||||||||||| ||| ||||| |||||||| ||    
T  20470376 tgagtttgttgacccagttcggcgacaatcacacctactctggaggctaccaagccaggaaggaaatccactagtgtactccttattctatagctctcag 20470277  T
Q  176 caaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||||||||||||| |||||| |||||||||||||||||||    
T  20470276 caaactcctcgtttacactaaagacctaggacctacccgta 20470236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 9281851 - 9281741
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 205  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||| |    
T  9281851 cacctactctgggggctaccaagcctggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaag 9281752  T
Q  206 acctacccgta 216  Q
    |||||||||||    
T  9281751 acctacccgta 9281741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 79 - 216
Target Start/End: Original strand, 24501812 - 24501950
Alignment:
Q  79 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 177  Q
    |||||||||||||||||||||| |||   |||||||||| | |||||||||||||| ||||||||||||||||||||||| ||||| |||||||| ||||    
T  24501812 agtttgttaacccagttcggtgacaaacacacctactctagaggctaccaagccagaaaggaaatccactagtgtagtccttattctatagctctcagca 24501911  T
Q  178 aactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||||||| ||| |||||| |||||||||||||||||||    
T  24501912 aactcctcatttacactaaagacctaggacctacccgta 24501950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 13195340 - 13195450
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 205  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||| || ||||||||||||| ||||| ||||||||||    
T  13195340 cacctactctaggggctaccaagccatgaaggaaatccactagtgtagtccttattcaatagctctcagaaaactcctcgtttacactatatgacctagg 13195439  T
Q  206 acctacccgta 216  Q
    |||||||||||    
T  13195440 acctacccgta 13195450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 25805470 - 25805579
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 206  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||  |||||||| |||||||||||||||| |||||| |||||||||    
T  25805470 cacctactctagaggctaccaagccaggaaggaaatccactagtgtagtccttattatatagctctcagcaaactcctcgtttacactaaagacctagga 25805569  T
Q  207 cctacccgta 216  Q
    ||||||||||    
T  25805570 cctacccgta 25805579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 114 - 215
Target Start/End: Complemental strand, 21723543 - 21723442
Alignment:
Q  114 tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacc 212  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  21723543 tctgggggct-ccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacc 21723445  T
Q  213 cgt 215  Q
    |||    
T  21723444 cgt 21723442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 72 - 212
Target Start/End: Complemental strand, 20989943 - 20989802
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| ||    ||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| ||||||    
T  20989943 cacaatgagtttgttgacccagttcggtgacagacacacctactctgggggctaccaagtcagaaaggaaatccactagtgtagtccttattctatagct 20989844  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacc 212  Q
    || |||||||||||||||| || ||| |||||| ||||||||    
T  20989843 ctcagcaaactcctcgtttacattaaagacctatgacctacc 20989802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 76 - 216
Target Start/End: Complemental strand, 29255089 - 29254949
Alignment:
Q  76 gtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctta 174  Q
    ||||||||||| ||||||||| ||| |||   |||||||||| ||| ||| |||||||||||| ||||||||||||||||||| ||||| |||||||| |    
T  29255089 gtgagtttgttgacccagttcagtggcaaacacacctactctaggg-ctatcaagccaggaagaaaatccactagtgtagtccttattctatagctctca 29254991  T
Q  175 gcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    ||||||||||||||| |||||| |||||||||||||||||||    
T  29254990 gcaaactcctcgtttacactaaagacctaggacctacccgta 29254949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 28623499 - 28623654
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| ||| || |||||||||||||||||||||  |||| |||||||| ||| |||||||||||||||||||||||||  ||||||||||||| |    
T  28623499 aaagtaaaaggcagagagagtttgttaacccagttcggcacaac-tcacctacatctaggggctaccaagccaggaaggaaataaactagtgtagtcctt 28623597  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||| | |||||| |||||| || |||||| |||| | |||||||||||||||||||    
T  28623598 attctaaagctctgagcaaaatcttcgtttacacttaagacctaggacctacccgta 28623654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 111 - 219
Target Start/End: Original strand, 32449271 - 32449379
Alignment:
Q  111 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggaccta 210  Q
    |||||| ||||||||||| |||||||||||||||| ||||||| ||| |||| ||||| ||| ||||||||||||||||||||||||| |||||||||||    
T  32449271 tactctaggggctaccaaaccaggaaggaaatccattagtgtattccttatttaatagttctcagcaaactcctcgtttgcactaatgtcctaggaccta 32449370  T
Q  211 cccgtactg 219  Q
    |||||||||    
T  32449371 cccgtactg 32449379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 72 - 213
Target Start/End: Complemental strand, 17528063 - 17527920
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||||||||||||| ||| |||   |||||||| | |||||||||||||||| |||  |||||||||||||||||| |||||||||| |    
T  17528063 cacagtgagtttgttaacccagttcagtgacaaacacacctactattggggctaccaagccagaaagttaatccactagtgtagtccttattcaatagtt 17527964  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctaccc 213  Q
    || ||||||||||| |||| ||||| ||||||||||||||||||    
T  17527963 ctcagcaaactccttgtttacactatatgacctaggacctaccc 17527920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 14258891 - 14259037
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtgc-aacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| |||||||||||||  ||   |||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||    
T  14258891 cacaatgagtttgttgacccagttcggtgagaaacacacctactttgggggctaccaagcgaggaaggaaatccactagtgtagtccttattcaatagct 14258990  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || | ||||||  |||||| || || |||||||||||||||||||||    
T  14258991 ctcaacaaacttatcgtttacaatatatgacctaggacctacccgta 14259037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 212
Target Start/End: Complemental strand, 17864603 - 17864462
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||||| |||||||| ||| ||||||||| |||   ||||||||||||||| |||||| |||||||| ||||||||||||||||||| ||||| ||||||    
T  17864603 cacagtaagtttgttgacctagttcggtgacaaacacacctactctgggggttaccaatccaggaagaaaatccactagtgtagtccttattctatagct 17864504  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacc 212  Q
    || |||||||||||||||| |||||| |  ||||||||||||    
T  17864503 ctcagcaaactcctcgtttacactaaagtactaggacctacc 17864462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 72 - 212
Target Start/End: Complemental strand, 23882872 - 23882731
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| |||   ||||||||||||||||||||||  ||||||||||||||||||||||||||  ||||| ||||||    
T  23882872 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaaatcaggaaggaaatccactagtgtagtctttattctatagct 23882773  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacc 212  Q
    |  ||||||||| | |||| |||||| |||||||||||||||    
T  23882772 cccagcaaactctttgtttacactaaagacctaggacctacc 23882731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 72 - 215
Target Start/End: Complemental strand, 21706528 - 21706383
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagc 169  Q
    |||| ||||||||||||||||||| |||| |||   ||||||| || ||||||| || ||| |||||| ||||||||||||||||||| |||||||||||    
T  21706528 cacaatgagtttgttaacccagtttggtgacaaacacacctacgtccgggggct-cctagctaggaagaaaatccactagtgtagtccttattcaatagc 21706430  T
Q  170 tcttagcaaactcctcgtttgcacta-atgacctaggacctacccgt 215  Q
    ||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  21706429 tctcagcaaactcctcgtttacactatatgacctaggacctacccgt 21706383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 12039824 - 12039715
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 206  Q
    |||||||| ||||||||||||||| ||||||||||||  |||||||||||| ||||| |||||||| | |||||||||||||| |||||| |||||||||    
T  12039824 cacctactttgggggctaccaagctaggaaggaaatcttctagtgtagtccttattctatagctctcaacaaactcctcgtttacactaaagacctagga 12039725  T
Q  207 cctacccgta 216  Q
    ||||| ||||    
T  12039724 cctactcgta 12039715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 118 - 216
Target Start/End: Original strand, 25964722 - 25964821
Alignment:
Q  118 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||| ||||| |||||||||||||||||||||    
T  25964722 ggggctaccaagccaggaaggaaatccactagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgta 25964821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 118 - 216
Target Start/End: Original strand, 25969369 - 25969468
Alignment:
Q  118 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||| ||||| |||||||||||||||||||||    
T  25969369 ggggctaccaagccaggaaggaaatccactagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgta 25969468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 118 - 216
Target Start/End: Original strand, 25973809 - 25973908
Alignment:
Q  118 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||| ||||| ||||| |||||| |||||| ||||| |||||||||||||||||||||    
T  25973809 ggggctaccaagccaggaaggaaatccactagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgta 25973908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 17234572 - 17234718
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| |||||||| |||| |||   |||||||||| ||||||||||||||  ||||||||||||| |||||||||| ||||||||||||    
T  17234572 cacaatgagtttgttgacccagtttggtgacaaacacacctactctaggggctaccaagcccagaaggaaatccaccagtgtagtccttattcaatagct 17234671  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    ||  |||||||||  |||| ||||| |||||||| ||||||||||||    
T  17234672 ctctgcaaactccctgtttacactatatgacctatgacctacccgta 17234718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 26965760 - 26965604
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| |||||   |||||||| ||||||||||||| |||   |||||||||||| ||||| |||| ||||||||||||||||||||||||||| |    
T  26965760 aaagtaaaaggcacaaacagtttgttgacccagttcggtgacaaacacacctactctggaggctatcaagtcaggaaggaaatccactagtgtagtcctt 26965661  T
Q  160 attcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgt 215  Q
    |||| | || ||| |||||||||||| ||| | ||| | ||||||||||||||||||    
T  26965660 attctaaagttctcagcaaactcctcatttacaacttaagacctaggacctacccgt 26965604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 73 - 172
Target Start/End: Original strand, 25782793 - 25782893
Alignment:
Q  73 acagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 171  Q
    |||||||||||||||||||||||||||| |||   |||||||||||| |||||||||||||| |||||||||||||||||||| |  ||||| |||||||    
T  25782793 acagtgagtttgttaacccagttcggtgacaaacacacctactctggaggctaccaagccagtaaggaaatccactagtgtagccattattctatagctc 25782892  T
Q  172 t 172  Q
    |    
T  25782893 t 25782893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 215
Target Start/End: Complemental strand, 13870493 - 13870399
Alignment:
Q  122 ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgt 215  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| ||| | |||| ||||| |||||| |||||||||||||    
T  13870493 ctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcatcaagctcattgtttacactatatgaccgaggacctacccgt 13870399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 78 - 216
Target Start/End: Complemental strand, 3567592 - 3567455
Alignment:
Q  78 gagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagc 176  Q
    |||||||||||| ||||||||  |||| |||||||| ||||||| ||||||||  ||||| | |||||||||||||||| | ||||| | |||||| |||    
T  3567592 gagtttgttaactcagttcggcacaac-tcacctacatctgggg-ctaccaagttaggaaagtaatccactagtgtagttcttattctaaagctctcagc 3567495  T
Q  177 aaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    ||| ||||||||| |||| | |||||||||||||||||||    
T  3567494 aaaatcctcgtttacacttaagacctaggacctacccgta 3567455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 8465846 - 8465705
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||| ||||||| |||   ||||||||||||||||| ||||||||||||     ||| |||||||||||| || || ||||||    
T  8465846 cacaatgagtttgttgacccatttcggtgacaaacacacctactctgggggctgccaagccaggaat----tccgctagtgtagtccttactctatagct 8465751  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    || ||||||||||   ||| |||||| |||||||||||||||||||    
T  8465750 ctcagcaaactccaaatttacactaaagacctaggacctacccgta 8465705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 216
Target Start/End: Original strand, 19171452 - 19171542
Alignment:
Q  127 aagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    |||| |||||||||||||||||||||||||| ||||||||| |||| |||||| |||| | ||  |||| |||||||||||||||||||||    
T  19171452 aagctaggaaggaaatccactagtgtagtccttattcaataactctcagcaaagtccttgcttatactatatgacctaggacctacccgta 19171542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 66 - 163
Target Start/End: Complemental strand, 21323457 - 21323360
Alignment:
Q  66 aaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 163  Q
    |||| |||||| ||||||||||||||| |||||  |||| |||||||| | |||||||||||||  ||||||||||||||||||||||||||| |||||    
T  21323457 aaaaggcacagagagtttgttaacccaattcggcacaac-tcacctacatttgggggctaccaaatcaggaaggaaatccactagtgtagtccttattc 21323360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 22885305 - 22885237
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||||||| |||||||||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  22885305 tttgttaacccagtacggtgcaacgtcacctacatctgggggcatccaagccaggaaggaaatctacta 22885237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 84 - 163
Target Start/End: Complemental strand, 20765160 - 20765080
Alignment:
Q  84 gttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 163  Q
    ||||||||||||||||| |||   ||| |||||||||||| |||||||||||||| || |||||||||||||||| |||||    
T  20765160 gttaacccagttcggtgacaaacacacttactctgggggcgaccaagccaggaagaaagtccactagtgtagtccttattc 20765080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 3904834 - 3904767
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||| ||||||||| |||||| |||||  | |||||||||||||||||||||||||| ||||    
T  3904834 tttgttaacctagttcggtgaaacgtcccctacgtttggggctaccaagccaggaaggaaatcaacta 3904767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 61 - 153
Target Start/End: Original strand, 30424905 - 30424998
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgta 153  Q
    |||||||||| |||||  || ||||| | ||||||||||| |||   |||||||||| ||||||||||||||| |||||||||||| |||||||    
T  30424905 aaagtaaaatacacaggaagattgttgaaccagttcggtgacaaacacacctactctaggggctaccaagccaagaaggaaatccattagtgta 30424998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 18152874 - 18152798
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    ||||||||||||||| ||| |||   |||||||| ||| |||||||||| ||||||||||||||||||| |||||||    
T  18152874 ttgttaacccagttcagtgacaaacacacctactatggaggctaccaaggcaggaaggaaatccactagcgtagtcc 18152798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 22903263 - 22903195
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||||||| |||||||||||||||||| ||||||| |  ||||||||||||| ||||| ||||    
T  22903263 tttgttaacccagtgcggtgcaacgtcacctacatctggggacatccaagccaggaagaaaatctacta 22903195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 11960511 - 11960608
Alignment:
Q  120 ggctaccaagccaggaaggaaatccactagtgtagtc-cgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgt 215  Q
    ||||||||||||| |||||||||| | ||||||||||   ||||| | || ||| |||||||||||||||| | ||| | ||||||||||||||||||    
T  11960511 ggctaccaagccacgaaggaaatctattagtgtagtcttttattctaaagttctcagcaaactcctcgtttacaactgaagacctaggacctacccgt 11960608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 12464156 - 12464225
Alignment:
Q  80 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||| |||||||||||||| |||||||| | |||| |||||| || |||||||||||| |||||    
T  12464156 gtttgttaactcagttcggtgcaacttcacctacatgtgggagctaccgagtcaggaaggaaattcacta 12464225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 85 - 148
Target Start/End: Complemental strand, 1103474 - 1103411
Alignment:
Q  85 ttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||||||||||||||| ||| ||| ||||||| ||||||||||||||| |||||| ||||    
T  1103474 ttaacccagttcggtgcaacgccacttacgtctgggg-ctaccaagccaggaaagaaatctacta 1103411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 3357165 - 3357097
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||||| || ||||||| ||||||||  ||| ||||||||||||||| ||||||||| |||||    
T  3357165 tttgttaacccaattaggtgcaatgtcacctatatctaggggctaccaagccaagaaggaaattcacta 3357097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 148
Target Start/End: Original strand, 13553349 - 13553409
Alignment:
Q  89 cccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||| |||||||| |||||||| | |||||||||||| |||||||||||||| |||||    
T  13553349 cccagttgggtgcaacatcacctacgtttgggggctaccatgccaggaaggaaattcacta 13553409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 143
Target Start/End: Complemental strand, 22918108 - 22918045
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatc 143  Q
    ||||||||||||||  ||||||||||||||||| |||| || |  |||||||||||||||||||    
T  22918108 tttgttaacccagtatggtgcaacgtcacctacatctgaggacatccaagccaggaaggaaatc 22918045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 148 - 213
Target Start/End: Complemental strand, 19894722 - 19894656
Alignment:
Q  148 agtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctaccc 213  Q
    |||||||||| |||||||||||||| | |||| |||| |||| || || ||||||||||||||||||    
T  19894722 agtgtagtccttattcaatagctctcatcaaattccttgtttacattatatgacctaggacctaccc 19894656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 140
Target Start/End: Original strand, 16176583 - 16176644
Alignment:
Q  80 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaa 140  Q
    ||||||||||||||||  |||| || |||||||| ||||  |||||||||||||||||||||    
T  16176583 gtttgttaacccagtttagtgcgacttcacctacgtctgcaggctaccaagccaggaaggaa 16176644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 28045092 - 28045031
Alignment:
Q  88 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||||||||||  |||||||| | |||||||||||||| ||| || |||||||||||    
T  28045092 acccagttcggtgcaatttcacctacatatgggggctaccaaggcagaaatgaaatccacta 28045031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 14448651 - 14448583
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcaccta-ctctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||| |||||||||||||||||| ||  |||  |||||| ||||||  |||||||||||||||    
T  14448651 tttgttaacctagttcggtgcaacgtcacttagatcttagggctatcaagcctagaaggaaatccacta 14448583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 1e-89; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 2 - 219
Target Start/End: Original strand, 17279797 - 17280017
Alignment:
Q  2 atgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaa---tgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcgg 98  Q
    ||||||||||||||||||||||||| |||||| ||||| ||||||||||   | ||||||||||||||||| |||||| |||||||||||||||||||||    
T  17279797 atgttgaataaaatgtttcgaacactaagctaccacaagacaagaaaaaaaattcaaagcataaagtaaaaggcacagagagtttgttaacccagttcgg 17279896  T
Q  99 tgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatg 198  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||    
T  17279897 tgcaacgtcacctactctgggggataccaagccaggaaggaaatccactagtgtagttcgtattcaatagctctaagcaaactcctcgtttgcactaatg 17279996  T
Q  199 acctaggacctacccgtactg 219  Q
    ||||||||||||||| |||||    
T  17279997 acctaggacctacccatactg 17280017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 2 - 216
Target Start/End: Original strand, 8726772 - 8726970
Alignment:
Q  2 atgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgc 101  Q
    ||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||||||||                |    
T  8726772 atgttgaataaaatgtttcgaacaccaagctaacataagacaagaaaaatgcaaagcataaagtaaaagggacagtgagtttg----------------c 8726855  T
Q  102 aacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacc 201  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  8726856 aacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccatattcaatagctctcagcaaactcctcgtttgcactaacgacc 8726955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 2 - 219
Target Start/End: Complemental strand, 37155774 - 37155555
Alignment:
Q  2 atgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggtg 100  Q
    ||||||||| ||||||||| ||||| ||||||||| || ||||| ||||  ||||| ||||| |||||  |||||  |||||||||| |||||||||||     
T  37155774 atgttgaatgaaatgtttcaaacactaagctaacaaaagacaagtaaaacacaaagaataaaagtaaatggcacaaagagtttgttagcccagttcggta 37155675  T
Q  101 caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atga 199  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| |||||||||||||| |||||||||||||||||||||| ||||    
T  37155674 taacgtcacctactctgggggctaccaagccaggaaggaaattcactagtgtaatccttattcaatagctctcagcaaactcctcgtttgcactatatga 37155575  T
Q  200 cctaggacctacccgtactg 219  Q
    ||||||||||||||||||||    
T  37155574 cctaggacctacccgtactg 37155555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 61 - 219
Target Start/End: Complemental strand, 17880928 - 17880769
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctggggg-ctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| | |    
T  17880928 aaagtaaatggcacagtgagtttgttaacccagttcggtgcaacgtcacctactctggggggctaccaagccaagaaggaaatccactagtgtagttctt 17880829  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactg 219  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||||    
T  17880828 attcaatagctctcagcaaactcctcgtttgcactaatgacctaggaacgacccgtactg 17880769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 39080876 - 39081094
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatg-cacagtgagtttgttaacccagttcggt 99  Q
    |||||||||||| |||||| |||||  ||||||||| || ||||| ||||  |||||||||||   ||||| ||||| |||||||||||| |||| |  |    
T  39080876 gatgttgaataagatgttttgaacattaagctaaca-aagacaagtaaaacacaaagcataaaaataaatggcacagagagtttgttaactcagtacaat 39080974  T
Q  100 gcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatga 199  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||| |||||||||||||    
T  39080975 gcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcatttgcactaatga 39081074  T
Q  200 cctaggacctacccgtactg 219  Q
    ||||| ||||||||||||||    
T  39081075 cctagaacctacccgtactg 39081094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 61 - 219
Target Start/End: Complemental strand, 33466348 - 33466190
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    |||| |||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  33466348 aaagaaaaaggcacagagagtttgttaatccagttcggtgcaacgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtcctta 33466249  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactg 219  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  33466248 ttcaaaagctctcagcaaacttctcgtttgcactaatgacctaggacctaccggtactg 33466190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 24091938 - 24092083
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||| ||| ||||||||| |||   |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| | ||||    
T  24091938 cacagtgagtttgttgacctagttcggtgacaaacacacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccttattctacagct 24092037  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    || |||||||||||||||| |||||| |||||||||||||||||||    
T  24092038 ctcagcaaactcctcgtttacactaaagacctaggacctacccgta 24092083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 118 - 219
Target Start/End: Original strand, 22874206 - 22874307
Alignment:
Q  118 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtac 217  Q
    ||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  22874206 ggggctaccaagctaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcatttgcactaatgacctaggacctacccgtac 22874305  T
Q  218 tg 219  Q
    ||    
T  22874306 tg 22874307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 107 - 213
Target Start/End: Original strand, 22476247 - 22476354
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 205  Q
    |||||||| || ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||    
T  22476247 cacctactttgagggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctagg 22476346  T
Q  206 acctaccc 213  Q
    ||||||||    
T  22476347 acctaccc 22476354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 23249705 - 23249806
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    ||||||||| |||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||    
T  23249705 aaagtaaaaggcacaacgagtttgttaacccaattcggtgcaacgtcacctactctgggggctaccaagccaagaaggaaatccactagtgtagtcctta 23249804  T
Q  161 tt 162  Q
    ||    
T  23249805 tt 23249806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 76 - 216
Target Start/End: Original strand, 33977043 - 33977184
Alignment:
Q  76 gtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctta 174  Q
    ||||||||||| ||||||||||||  |||   ||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||| |||||||| |    
T  33977043 gtgagtttgttgacccagttcggtaacaaacgcacctactctgggggctaccaagtcagaaaggaaatccactagtgtagtccttattctatagctctca 33977142  T
Q  175 gcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||||||||| |||| |||||| ||||||| |||||||||||    
T  33977143 gcaaactccttgtttacactaaagacctagaacctacccgta 33977184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 9996469 - 9996625
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    |||||||||  |||||  |||||||||||||||||||||| |||   |||||||||||| | |||||||| |||||| ||||||||||| |||||||| |    
T  9996469 aaagtaaaagacacagcaagtttgttaacccagttcggtgacaaacacacctactctggagactaccaagtcaggaatgaaatccactattgtagtcctt 9996568  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||| |||||||| |||||||||||| ||| |||||| |||||||||||||||||||    
T  9996569 attctatagctctcagcaaactcctcatttacactaaagacctaggacctacccgta 9996625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 215
Target Start/End: Original strand, 1683948 - 1684100
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    ||||||||| |||||   |||||||||||||| ||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||| ||    
T  1683948 aaagtaaaaggcacaagaagtttgttaacccaattcggtgcaacgtcacctactctggcg-ctaccaagccagga-ggaaatccactagtgtagtcctta 1684045  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgt 215  Q
    |||  || |||  |||||||||||||||| |||||| |||||||| | |||||||    
T  1684046 ttctctaactcccagcaaactcctcgtttacactaaagacctaggtcatacccgt 1684100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 11221445 - 11221305
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||| ||| ||||||||| |||   |||||||||||||||||||||| |||||||||||||     |||||||||| ||||| ||||||    
T  11221445 cacagtgagtttgttgacctagttcggtgacaaacacacctactctgggggctaccaaaccaggaaggaaat-----agtgtagtccttattctatagct 11221351  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    || |||||||||||||||| |||||| |||||||||||||||||||    
T  11221350 ctcagcaaactcctcgtttacactaaagacctaggacctacccgta 11221305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 23541589 - 23541443
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||| ||||||||| |||   |||||||||||||||||||||| || ||||||||||||||||||||||| | ||||||||||||    
T  23541589 cacaatgagtttgttgacctagttcggtgacaaacacacctactctgggggctaccaaaccgggaaggaaatccactagtgtagtacttattcaatagct 23541490  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||||  ||||| ||||| || ||||||||||||| ||||    
T  23541489 ctcagcaaactcgccgtttacactatattacctaggacctactcgta 23541443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 61 - 215
Target Start/End: Original strand, 25240375 - 25240531
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| | ||| |||||||||| ||||||||||||| |||   |||||||   |||||||||||| ||||||||||||||||| |||||||||| |    
T  25240375 aaagtaaaaggtacattgagtttgtttacccagttcggtgacaaacacacctaccaagggggctaccaaaccaggaaggaaatccaccagtgtagtcctt 25240474  T
Q  160 attcaatagctcttagcaaactcctcgtttgcac-taatgacctaggacctacccgt 215  Q
    |||||| |||||| |||||||||||  ||| ||| | | ||||||||||||||||||    
T  25240475 attcaaaagctctcagcaaactccttctttacactttacgacctaggacctacccgt 25240531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 215
Target Start/End: Complemental strand, 12814734 - 12814626
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 205  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| | || ||| |||||||||||||||| | |||   ||||||||    
T  12814734 cacctactctgggggctaccaagccaggaaggaaattcactagtgtagtccttattcta-agttctcagcaaactcctcgtttacaactgtagacctagg 12814636  T
Q  206 acctacccgt 215  Q
    ||||||||||    
T  12814635 acctacccgt 12814626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 13660513 - 13660405
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 206  Q
    |||||||||||||||||||||| | ||||| |||||||||||||||||||  ||||| | |||||| |||||||||||||||| | |||| ||||| |||    
T  13660513 cacctactctgggggctaccaaactaggaaagaaatccactagtgtagtctttattcta-agctctcagcaaactcctcgtttactctaaagacctggga 13660415  T
Q  207 cctacccgta 216  Q
    ||||||||||    
T  13660414 cctacccgta 13660405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 13719156 - 13719048
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 206  Q
    |||||||||||||||||||||| | ||||| |||||||||||||||||||  ||||| | |||||| |||||||||||||||| | |||| ||||| |||    
T  13719156 cacctactctgggggctaccaaactaggaaagaaatccactagtgtagtctttattcta-agctctcagcaaactcctcgtttactctaaagacctggga 13719058  T
Q  207 cctacccgta 216  Q
    ||||||||||    
T  13719057 cctacccgta 13719048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 76 - 189
Target Start/End: Original strand, 33961746 - 33961860
Alignment:
Q  76 gtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctta 174  Q
    ||||||||||| ||||||||||||  |||  |||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||| ||||  || |    
T  33961746 gtgagtttgttgacccagttcggtaacaaactcacctactctgggggctaccacgtcaggaaggaaatcaactagtgtagtccgtattctataggactca 33961845  T
Q  175 gcaaactcctcgttt 189  Q
     ||||||||| ||||    
T  33961846 acaaactccttgttt 33961860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 157
Target Start/End: Complemental strand, 1562556 - 1562459
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    ||||||||| ||||||   ||||||||||||||||||| | |||   |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  1562556 aaagtaaaaagcacaggaggtttgttaacccagttcggcgacaaacacacctactttgggggctaccaagccaggaaggaaatccactagtgtagtcc 1562459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 72 - 155
Target Start/End: Original strand, 45133645 - 45133729
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 155  Q
    |||| |||||||||| ||||||||||||| |||   |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  45133645 cacattgagtttgttgacccagttcggtgacaaacacacctactctgggggctatcaagccaggaaggaaatccactagtgtagt 45133729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 206
Target Start/End: Original strand, 22485177 - 22485250
Alignment:
Q  134 gaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagga 206  Q
    |||| ||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||    
T  22485177 gaagaaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctagga 22485250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 215
Target Start/End: Complemental strand, 23864637 - 23864501
Alignment:
Q  80 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaa 178  Q
    |||| |||||||| || |||||||| |||||||| |||||||| ||||||| ||||||| ||||||||||||||||||| ||||| | || ||| |||||    
T  23864637 gttttttaacccaatttggtgcaacatcacctacatctgggggataccaagtcaggaagaaaatccactagtgtagtccttattcta-agttctcagcaa 23864539  T
Q  179 actcctcgtttgcactaat-gacctaggacctacccgt 215  Q
    |||||||| || || |  | ||||||||||||||||||    
T  23864538 actcctcgcttacaattctagacctaggacctacccgt 23864501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 78 - 189
Target Start/End: Complemental strand, 24850603 - 24850493
Alignment:
Q  78 gagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagc 176  Q
    |||||||||||||||||| ||  |||| |||||||| | ||||||||||||||| |||||||||||||||||||||||||| ||||| | || | | |||    
T  24850603 gagtttgttaacccagtttggcacaac-tcacctacatatgggggctaccaagctaggaaggaaatccactagtgtagtccttattcta-agttatcagc 24850506  T
Q  177 aaactcctcgttt 189  Q
    |||||||||||||    
T  24850505 aaactcctcgttt 24850493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 79 - 189
Target Start/End: Complemental strand, 20255054 - 20254943
Alignment:
Q  79 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 177  Q
    |||||||| ||||||||||||| |||   ||  |||| ||||||||||||||| ||||||||||||||||||||| |||| ||||| | || ||| ||||    
T  20255054 agtttgttgacccagttcggtgacaaacacatgtactatgggggctaccaagctaggaaggaaatccactagtgtggtccttattctaaagttctcagca 20254955  T
Q  178 aactcctcgttt 189  Q
    ||||||||||||    
T  20254954 aactcctcgttt 20254943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 216
Target Start/End: Original strand, 24384582 - 24384687
Alignment:
Q  111 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacct 209  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||| | || ||| ||||||||||  |||| | ||| | |||||||| |||    
T  24384582 tactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcta-agttctcagcaaactccaagtttacaacttaagacctagggcct 24384680  T
Q  210 acccgta 216  Q
    |||||||    
T  24384681 acccgta 24384687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 27925564 - 27925479
Alignment:
Q  131 caggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    ||||||||||||||||||||||||||| ||||| |||||||| | |||||||| | ||| ||| || ||| |||||||||||||||    
T  27925564 caggaaggaaatccactagtgtagtccttattctatagctctcaacaaactccacatttacaccaaagacataggacctacccgta 27925479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 81 - 158
Target Start/End: Original strand, 12240228 - 12240306
Alignment:
Q  81 tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccg 158  Q
    |||||||||||||||||||| |||   ||||||||| || ||||||||| ||||||||||||||| |||||||||||||    
T  12240228 tttgttaacccagttcggtgacaaacacacctactccggaggctaccaaaccaggaaggaaatccgctagtgtagtccg 12240306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 24482308 - 24482376
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||| |||| || ||||||||| |||||    
T  24482308 tttgttaacccagtttggtgcaacgtcacctacatctgggggctaacaagtcaagaaggaaattcacta 24482376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 159 - 216
Target Start/End: Original strand, 45136184 - 45136241
Alignment:
Q  159 tattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    ||||| |||||||| |||||||||||| ||| |||||| |||||||||||||||||||    
T  45136184 tattcgatagctctcagcaaactcctcatttacactaaagacctaggacctacccgta 45136241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 32179295 - 32179365
Alignment:
Q  79 agtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||||||||||||||||||| |||||||| ||||| |||||| |||  |||||| |||| |||||    
T  32179295 agtttgttaacccagttcggtgcaacttcacctacgtctggaggctacaaagttaggaagaaaattcacta 32179365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 82 - 157
Target Start/End: Original strand, 18753875 - 18753951
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    |||||||||||||||| || |||   ||||||||||  |||||| ||||||| ||||||||| || |||||||||||    
T  18753875 ttgttaacccagttcgatgacaaatacacctactctaagggctatcaagccaagaaggaaatacagtagtgtagtcc 18753951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 69)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 218
Target Start/End: Original strand, 7619991 - 7620208
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtg 100  Q
    |||||||||| | ||||||||||||| ||||||||| |  ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  7619991 gatgttgaatgagatgtttcgaacactaagctaacataggacaagaaaaatgcaaagcataaagtaaaaggcacagtgagtttgttaacccagttcggtg 7620090  T
Q  101 caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgac 200  Q
    |||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||    
T  7620091 caacgtcacctactttggaggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaaatcctcgtttgcactaatgac 7620190  T
Q  201 ctaggacctacccgtact 218  Q
    ||||||| ||||||||||    
T  7620191 ctaggacttacccgtact 7620208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 48797868 - 48797648
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa--gtaaaatg-cacagtgagtttgttaacccagttcg 97  Q
    |||||||||| ||||||||||||||| ||||||||| || ||||| ||||  |||||||||||  |||||| | |||||||||||||||||||||||||     
T  48797868 gatgttgaatgaaatgtttcgaacactaagctaaca-aagacaagtaaaactcaaagcataaaaagtaaaaaggcacagtgagtttgttaacccagttca 48797770  T
Q  98 gtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaat 197  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  48797769 gtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgcactaat 48797670  T
Q  198 gacctaggacctacccgtactg 219  Q
    ||||||||||||||||||||||    
T  48797669 gacctaggacctacccgtactg 48797648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 3290933 - 3290713
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggt 99  Q
    |||||||||||||||||||||||||| ||||||||| || ||||| ||||  ||||||||||| |||||  ||||||||||||||||||||||||| |||    
T  3290933 gatgttgaataaaatgtttcgaacactaagctaacaaaagacaagtaaaacacaaagcataaaagtaaatggcacagtgagtttgttaacccagtttggt 3290834  T
Q  100 gcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atg 198  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||    
T  3290833 gcaacgtcaccaactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgttttcactatatg 3290734  T
Q  199 acctaggacctacccgtactg 219  Q
    |||||||||||||||||||||    
T  3290733 acctaggacctacccgtactg 3290713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 14984584 - 14984800
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatg-cacagtgagtttgttaacccagttcggt 99  Q
    |||||||||||| |||||| |||||| ||||||||| || ||||| || |  |||||||||||   ||||| ||||  ||||||||||||||||||||||    
T  14984584 gatgttgaataagatgttttgaacactaagctaaca-aagacaagtaaca--caaagcataaaaataaatggcacatagagtttgttaacccagttcggt 14984680  T
Q  100 gcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatga 199  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||  ||||||||||||||    
T  14984681 gcaacgtcacctactctgggggctatcaagccaggaaggaaatccactagtgtagtccttattcaatatctctcaacaaactccctgtttgcactaatga 14984780  T
Q  200 cctaggacctacccgtactg 219  Q
    ||||| ||||||||||||||    
T  14984781 cctagaacctacccgtactg 14984800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 15414195 - 15414411
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatg-cacagtgagtttgttaacccagttcggt 99  Q
    |||||||||||| |||||| |||||| ||||||||| || ||||| || |  |||||||||||   ||||| ||||  ||||||||||||||||||||||    
T  15414195 gatgttgaataagatgttttgaacactaagctaaca-aagacaagtaaca--caaagcataaaaataaatggcacatagagtttgttaacccagttcggt 15414291  T
Q  100 gcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatga 199  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||| | ||||||||  ||||||||||||||    
T  15414292 gcaacgtcacctactctgggggctatcaagccaggaaggaaatccactagtgtagtccttattcaatatctctcaacaaactccctgtttgcactaatga 15414391  T
Q  200 cctaggacctacccgtactg 219  Q
    ||||| ||||||||||||||    
T  15414392 cctagaacctacccgtactg 15414411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 11628620 - 11628769
Alignment:
Q  71 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||| |||||| | ||||||||||||||||  |||||||| ||||||||||||    
T  11628620 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactttgggggttaccaaactaggaaggaaatccactcttgtagtccttattcaatagct 11628719  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgtactg 219  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11628720 cttagcaaactcctcgtttgcactatatgacctaggacctacccgtactg 11628769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 14975343 - 14975561
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaag-taaaatgcacagtgagtttgttaacccagttcggt 99  Q
    |||||||||||| |||||| |||||| ||||||||| || ||||| ||||  |||||||||||  ||||  |||||  || |||||||||||||||||||    
T  14975343 gatgttgaataagatgttttgaacactaagctaaca-aagacaagtaaaacacaaagcataaaaataaacagcacacagattttgttaacccagttcggt 14975441  T
Q  100 gcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatga 199  Q
    |||||||||||||||| |||||| |||| |||||||| |||||| ||||||||| ||| |||||||||||||| | |||||| |||||||||||||||||    
T  14975442 gcaacgtcacctactccgggggcaaccatgccaggaacgaaatctactagtgtattccttattcaatagctctcaacaaacttctcgtttgcactaatga 14975541  T
Q  200 cctaggacctacccgtactg 219  Q
    ||||||||||||||||||||    
T  14975542 cctaggacctacccgtactg 14975561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 15404819 - 15405037
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaag-taaaatgcacagtgagtttgttaacccagttcggt 99  Q
    |||||||||||| |||||| |||||| ||||||||| || ||||| ||||  |||||||||||  ||||  |||||  || |||||||||||||||||||    
T  15404819 gatgttgaataagatgttttgaacactaagctaaca-aagacaagtaaaacacaaagcataaaaataaacagcacacagattttgttaacccagttcggt 15404917  T
Q  100 gcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatga 199  Q
    |||||||||||||||| |||||| |||| |||||||| |||||| ||||||||| ||| |||||||||||||| | |||||| |||||||||||||||||    
T  15404918 gcaacgtcacctactccgggggcaaccatgccaggaacgaaatctactagtgtattccttattcaatagctctcaacaaacttctcgtttgcactaatga 15405017  T
Q  200 cctaggacctacccgtactg 219  Q
    ||||||||||||||||||||    
T  15405018 cctaggacctacccgtactg 15405037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 82 - 219
Target Start/End: Original strand, 30226076 - 30226215
Alignment:
Q  82 ttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 180  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  30226076 ttgttaacccagttcggtgcaacgtcacctacatctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaac 30226175  T
Q  181 tcctcgtttgcacta-atgacctaggacctacccgtactg 219  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  30226176 tcctcgtttgcactatatgacctaggacctacccgtactg 30226215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 82 - 219
Target Start/End: Original strand, 42782747 - 42782885
Alignment:
Q  82 ttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaact 181  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| ||||||||    
T  42782747 ttgttaacccagttcggtgcaatgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtccttattcaatagctctcagcaaact 42782846  T
Q  182 cctcgtttgcacta-atgacctaggacctacccgtactg 219  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  42782847 cctcgtttgcaatatatgacctaggacctacccgtactg 42782885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 61 - 214
Target Start/End: Original strand, 9564227 - 9564379
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||| ||    
T  9564227 aaagtaaaaggcacagagagtttgttaacccagttcggtgcaacgtcacctactctgggggctacaaagccagg-aggaaatccaatagtgtagtcctta 9564325  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccg 214  Q
    |||  ||||||| |||||||||||||||| ||| || |||||||||||||||||    
T  9564326 ttctctagctctcagcaaactcctcgtttacacaaaagacctaggacctacccg 9564379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 72 - 215
Target Start/End: Complemental strand, 13455289 - 13455145
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 171  Q
    |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||    
T  13455289 cacaatgagtttgttaacctagttcggtgcaacgtcacctactctgggggctaccaagcaaggaaggaaatccactagtgtagtccttattcaaaagctc 13455190  T
Q  172 ttagcaaactcctcgtttgcac-taatgacctaggacctacccgt 215  Q
    || ||||||||||||||| ||| | ||||| ||||||||||||||    
T  13455189 ttggcaaactcctcgtttacactttatgacttaggacctacccgt 13455145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 9566876 - 9567027
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||| |||||||||| ||    
T  9566876 aaagtaaaaagcacagagagtttgttaacccagttcggtgcaacgttacctactcagggggctaccaagccagg-aggaaatccacaagtgtagtcctta 9566974  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctaccc 213  Q
    |||  ||||||| |||||||||||| ||| |||||| ||||||||||||||||    
T  9566975 ttctctagctctcagcaaactcctcatttacactaaagacctaggacctaccc 9567027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 65 - 215
Target Start/End: Complemental strand, 4794772 - 4794623
Alignment:
Q  65 taaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattca 164  Q
    ||||| |||||| |||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||     
T  4794772 taaaaagcacagagagttttttaacccagttcagtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccactagtgtagtccttattct 4794674  T
Q  165 atagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgt 215  Q
     |||||||  | ||||||||||||| |||||| ||||||||||||||||||    
T  4794673 ctagctctcggaaaactcctcgtttacactaaagacctaggacctacccgt 4794623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 61 - 212
Target Start/End: Original strand, 10658353 - 10658505
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| ||||||  |||||||||||||||||| ||| |||   |||||||||||| |||||||||||||||||||||||||||||||||||||| |    
T  10658353 aaagtaaaaggcacagcaagtttgttaacccagttccgtgacaaacacacctactctggaggctaccaagccaggaaggaaatccactagtgtagtcctt 10658452  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacc 212  Q
    |||| |||||||| |||||||||||||||| |||||| |||||||||||||||    
T  10658453 attctatagctctcagcaaactcctcgtttacactaaagacctaggacctacc 10658505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 71 - 216
Target Start/End: Complemental strand, 11560683 - 11560538
Alignment:
Q  71 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||| ||||||||||||| ||| |||||| | ||||||||||||    
T  11560683 gcacagtgagtttgttaacccagttcggtgcactgtcacctactctgggggctaccaagctaggaaggaaatccgctattgtagtgcttattcaatagct 11560584  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    || || ||||||||| ||| |||||| ||||||  |||||||||||    
T  11560583 ctcagtaaactcctcatttacactaaagacctacaacctacccgta 11560538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 79 - 213
Target Start/End: Original strand, 15436037 - 15436172
Alignment:
Q  79 agtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaa 178  Q
    |||||||||||||| |||| |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||| |||||| |||||    
T  15436037 agtttgttaacccaattcgatgcaacgtcacctactctaggggctaccaagccagaaaggaaatccactagtgtagtccttattcaaaagctctcagcaa 15436136  T
Q  179 actcctcgtttgcac-taatgacctaggacctaccc 213  Q
    ||||||||||| ||| | ||||| ||||||||||||    
T  15436137 actcctcgtttacactttatgacttaggacctaccc 15436172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 66 - 216
Target Start/End: Original strand, 15506243 - 15506394
Alignment:
Q  66 aaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaa 165  Q
    |||| ||||||  |||||||||||||| |||| |||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||| |||||||    
T  15506243 aaaaggcacaggaagtttgttaacccaattcgatgcaacgtcacctactctaggggctaccaagccagaatggaaatccactagtgtagtccttattcaa 15506342  T
Q  166 tagctcttagcaaactcctcgtttgca-ctaatgacctaggacctacccgta 216  Q
     |||||| |||||||||||||||| ||  | |||||||||||||||||||||    
T  15506343 aagctctcagcaaactcctcgtttacattttatgacctaggacctacccgta 15506394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 72 - 210
Target Start/End: Original strand, 20991523 - 20991662
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||    
T  20991523 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattttatagct 20991622  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggaccta 210  Q
    || |||||||||||||||| |||||| |||||||||||||    
T  20991623 ctcagcaaactcctcgtttacactaaagacctaggaccta 20991662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 11521588 - 11521442
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| |||||||| |||| |||   |||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  11521588 cacaatgagtttgttgacccagtttggtgacaaacacacctactctaggggctaccaagccaggaaggaaatctactagtgtagtccttattcaatagct 11521489  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||    
T  11521488 ctcagcaaactcctcgtttacactatatgacctaggacctacccgta 11521442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 4458720 - 4458866
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||||||| |||||| ||| ||||||||| |||   ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||||    
T  4458720 cacagtgaatttgttgaccgagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatctactagtgtagtccttattcaaaagct 4458819  T
Q  171 cttagcaaactcctcgtttgcac-taatgacctaggacctacccgta 216  Q
    || |||||||||||||||| ||| | |||||||||||||||||||||    
T  4458820 ctcagcaaactcctcgtttacactttatgacctaggacctacccgta 4458866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 79 - 216
Target Start/End: Original strand, 14926635 - 14926773
Alignment:
Q  79 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 177  Q
    ||||||||||||||||| |||| ||    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||    
T  14926635 agtttgttaacccagtttggtgacagacacacctactctgggggctaccaagccaagaaggaaatctactagtgtagtccttattcaatagctctcagca 14926734  T
Q  178 aactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||||||||||| || ||| |||||||||||||||||||    
T  14926735 aactcctcgtttacagtaaagacctaggacctacccgta 14926773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 79 - 216
Target Start/End: Original strand, 15350101 - 15350239
Alignment:
Q  79 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 177  Q
    ||||||||||||||||| |||| ||    |||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||| ||||    
T  15350101 agtttgttaacccagtttggtgacagacacacctactctgggggctaccaagccaagaaggaaatctactagtgtagtccttattcaatagctctcagca 15350200  T
Q  178 aactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||||||||||| || ||| |||||||||||||||||||    
T  15350201 aactcctcgtttacagtaaagacctaggacctacccgta 15350239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 16208023 - 16207913
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcac-taatgacctagg 205  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||| ||| | |||||||||     
T  16208023 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctagc 16207924  T
Q  206 acctacccgta 216  Q
    |||||||||||    
T  16207923 acctacccgta 16207913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 16436755 - 16436900
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||| ||||| ||||||| |||   |||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||  |||||    
T  16436755 cacagtgagtttgttgacccaattcggtgacaaacacacctactatgggggctaccaagcaaggaaggaaatccactagtgtagtccttattctgtagct 16436854  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    || | |||||||||| ||| |||||| |||||||||||||||||||    
T  16436855 ctcaacaaactcctcatttacactaaagacctaggacctacccgta 16436900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 61 - 213
Target Start/End: Original strand, 42636217 - 42636370
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| |||||   |||||||||||| ||||||||| |||    ||||||||||| ||||||||||| |||||||||||||||||||||||||| |    
T  42636217 aaagtaaaaggcacatcaagtttgttaaccaagttcggtgacaaacatacctactctggaggctaccaagcaaggaaggaaatccactagtgtagtcctt 42636316  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctaccc 213  Q
    |||| |||||||| ||||||||||| |||| |||||| ||||||||||||||||    
T  42636317 attctatagctctcagcaaactccttgtttacactaaagacctaggacctaccc 42636370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 645114 - 645260
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| ||| |||||||||||||||| ||| |||   |||||||| |||||||||| |||||||||||||||||||| |||||||||| ||||||||||||    
T  645114 cacaatgaatttgttaacccagttcagtgacaaacacacctactatgggggctacgaagccaggaaggaaatccaccagtgtagtccttattcaatagct 645213  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||| ||||||| ||||| |||||||||||||| ||||||    
T  645214 ctcagcaaacttctcgtttacactacatgacctaggacctccccgta 645260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 11588445 - 11588591
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||| |||||| |||||| |||   |||||||||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  11588445 cacagtgagtttgttgacccagctcggtgacaaacacacctactctagcggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagct 11588544  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    ||    ||||||||||||| |||||  ||||||||||||||||||||    
T  11588545 ctctaaaaactcctcgtttacactatttgacctaggacctacccgta 11588591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 107 - 216
Target Start/End: Complemental strand, 29546279 - 29546170
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 206  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| ||| |||| |||||||| ||||||| |||||| |||||||||    
T  29546279 cacctactctcggggctaccaagccaggaaggaaatccactactgtagtccttattctataactctcagcaaacttctcgtttacactaaagacctagga 29546180  T
Q  207 cctacccgta 216  Q
    ||||||||||    
T  29546179 cctacccgta 29546170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 216
Target Start/End: Original strand, 10279832 - 10279940
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctagga 206  Q
    |||||||||||||| ||||||||||||||||||||| ||| |||||||||| ||||| |||||||| |||||||||||||||||||||||  ||||||||    
T  10279832 cacctactctgggg-ctaccaagccaggaaggaaattcaccagtgtagtccttattctatagctctcagcaaactcctcgtttgcactaaatacctagga 10279930  T
Q  207 cctacccgta 216  Q
    |||| |||||    
T  10279931 cctatccgta 10279940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 11998860 - 11999006
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagc 169  Q
    |||| |||||||||| |||||||||| || |||   ||||||| || ||||||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  11998860 cacaatgagtttgttgacccagttcgatgacaaacacacctacgtccgggggct-ccaagccaggaaggaaatccactagtgtagtccttattcaatagc 11998958  T
Q  170 tcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    ||| | |||||||||| ||| ||||| |||||||||||||||||||||    
T  11998959 tctcaacaaactcctcatttacactatatgacctaggacctacccgta 11999006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 163
Target Start/End: Complemental strand, 26133103 - 26133000
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    |||||||||  |||| |||||||||||||||||||||||| ||| | |||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  26133103 aaagtaaaagacacaatgagtttgttaacccagttcggtgacaaagacacctactctgggggctatcaagccaggaaggaaatccactagtgtagtcctt 26133004  T
Q  160 attc 163  Q
    ||||    
T  26133003 attc 26133000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 2076496 - 2076565
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagt 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2076496 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccatgaaggaaatccactagt 2076565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 81 - 150
Target Start/End: Original strand, 2082915 - 2082984
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagt 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2082915 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccatgaaggaaatccactagt 2082984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 80 - 163
Target Start/End: Complemental strand, 23175050 - 23174966
Alignment:
Q  80 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 163  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||    
T  23175050 gtttgttaacccagttcggtgcaacatcacctacatctaggggctaccaagccaggaaggaaatccactagtgtagtccttattc 23174966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 118 - 216
Target Start/End: Original strand, 14165193 - 14165292
Alignment:
Q  118 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    ||||||||  |||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||| |||| |||| |||||||||||    
T  14165193 ggggctacatagccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttacactatatgatctagaacctacccgta 14165292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 61 - 215
Target Start/End: Complemental strand, 7586718 - 7586563
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| ||||||  | |||||| ||||||||||||| |||    ||||||||||||| |||||||||||||||||||||||||||||||||||| |    
T  7586718 aaagtaaaaggcacagacaatttgttgacccagttcggtgacaaacatacctactctgggg-ctaccaagccaggaaggaaatccactagtgtagtcctt 7586620  T
Q  160 attcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgt 215  Q
    |||| | |  ||| |||||| ||||||||| | ||| | ||||||||||||||||||    
T  7586619 attctaaacttctcagcaaaatcctcgtttacaacttaagacctaggacctacccgt 7586563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 80 - 162
Target Start/End: Original strand, 24813914 - 24813997
Alignment:
Q  80 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtatt 162  Q
    ||||||||||||||||||||||||| | |||||| |  ||||||||||||||||||||||||||||||||||||||||| ||||    
T  24813914 gtttgttaacccagttcggtgcaacatgacctacataggggggctaccaagccaggaaggaaatccactagtgtagtccttatt 24813997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 15708142 - 15708243
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| |||||||  |||||||||||||||| |||||||| |||||| | ||||||| ||||||||| |||||||||||||||||||||||||| |    
T  15708142 aaagtaaaaggcacagttggtttgttaacccagtttggtgcaac-tcacctgcatctggggtctaccaagctaggaaggaaatccactagtgtagtcctt 15708240  T
Q  160 att 162  Q
    |||    
T  15708241 att 15708243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 31269224 - 31269148
Alignment:
Q  80 gtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 155  Q
    ||||||||||||||||||||| |||  |||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  31269224 gtttgttaacccagttcggtgacaaactcacctactccgggggctaccaagccatgaaggaaatccactagtgtagt 31269148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 122 - 212
Target Start/End: Original strand, 12325845 - 12325936
Alignment:
Q  122 ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcac-taatgacctaggacctacc 212  Q
    |||||||||||||||||||||||||||||||||||  ||||||| |||||| |||||||||||| ||| ||| | ||||||| |||||||||    
T  12325845 ctaccaagccaggaaggaaatccactagtgtagtcattattcaaaagctctcagcaaactcctcatttacactttatgaccttggacctacc 12325936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 23057196 - 23057273
Alignment:
Q  81 tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    |||||||||||||||||||| |||   ||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  23057196 tttgttaacccagttcggtgacaaacacacctactctgagggctaccaagccaggaaggaaattcactagtgtagtcc 23057273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 189
Target Start/End: Complemental strand, 26195645 - 26195518
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| |||||||  ||||||||||||||||||||||||| |||||||| ||||| ||||||||||||| |||| |||| ||||| |||| ||| |    
T  26195645 aaagtaaaacgcacagttggtttgttaacccagttcggtgcaac-tcacctacatctggaggctaccaagccaagaagaaaattcactactgtattcctt 26195547  T
Q  160 attcaatagctcttagcaaactcctcgttt 189  Q
    |||| | || ||| |||||| |||||||||    
T  26195546 attcta-agttctcagcaaattcctcgttt 26195518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 71 - 144
Target Start/End: Complemental strand, 4547924 - 4547851
Alignment:
Q  71 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatcc 144  Q
    ||||| |||||||||||||||| |||| ||||||  |||||||||| ||||||| |||||||||||||||||||    
T  4547924 gcacaatgagtttgttaacccaattcgatgcaacagcacctactctaggggctatcaagccaggaaggaaatcc 4547851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 155
Target Start/End: Complemental strand, 20597013 - 20596918
Alignment:
Q  61 aaagtaaaatgcaca-gtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 155  Q
    ||||||||| ||||| |||| |||||||||| ||||||||| |||   |||||||||||||||||||||||||| |||||||||| |||||||||||    
T  20597013 aaagtaaaaggcacaagtga-tttgttaaccgagttcggtgacaaacacacctactctgggggctaccaagccaagaaggaaatcgactagtgtagt 20596918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 128 - 212
Target Start/End: Complemental strand, 20925222 - 20925138
Alignment:
Q  128 agccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacc 212  Q
    ||||| ||||||||||||||||| | |||| ||||| |||||||| | |||||||||||||| |||||| |||||| ||||||||    
T  20925222 agccaagaaggaaatccactagtttcgtccttattctatagctctcaacaaactcctcgtttacactaaagacctaagacctacc 20925138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 23956847 - 23956967
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| |||||| ||||||||| ||| ||||||||| |||   || ||||| | | |||||||||||||||||| ||||||||||||||||||| |    
T  23956847 aaagtaaaaggcacagagagtttgttgacctagttcggtgacaaacacatctactttagaggctaccaagccaggaagaaaatccactagtgtagtcctt 23956946  T
Q  160 attcaatagctcttagcaaac 180  Q
    |||| | || ||| |||||||    
T  23956947 attctaaagttctcagcaaac 23956967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 82 - 156
Target Start/End: Original strand, 7508426 - 7508501
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 156  Q
    |||||||||||||||| || |||   |||||||| | |||||||||||||||||||||||||||||||||||||||    
T  7508426 ttgttaacccagttcgatgacaaacacacctacttttggggctaccaagccaggaaggaaatccactagtgtagtc 7508501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 24902078 - 24902178
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| ||||||  |||||||| ||||||||| ||| |||   |||||| | | |||||||||||||||||||||||||||||||||||||||| |    
T  24902078 aaagtaaaaggcacag--agtttgttgacccagttcagtgacaaacacacctattataggggctaccaagccaggaaggaaatccactagtgtagtcctt 24902175  T
Q  160 att 162  Q
    |||    
T  24902176 att 24902178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 10251431 - 10251513
Alignment:
Q  82 ttgttaacccagttcggtgc-aacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 163  Q
    |||||||||||||||||||  ||   |||||||||||| ||||||||||||||||||||||||  |||||||||||| |||||    
T  10251431 ttgttaacccagttcggtgataaacacacctactctggaggctaccaagccaggaaggaaatcttctagtgtagtccttattc 10251513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 12505697 - 12505766
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tct-gggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||||||||||||| |||||||||||| ||| |||||||||||||| |||||||||||| ||||    
T  12505697 tttgttaacccagttcggtgtaacgtcacctacatctggggggctaccaagctaggaaggaaatctacta 12505766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 107 - 180
Target Start/End: Complemental strand, 23082915 - 23082842
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 180  Q
    ||||||||||  ||||||||||| ||||||||||||||||||||||||||| ||||| | || ||| |||||||    
T  23082915 cacctactctacgggctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaac 23082842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 9894208 - 9894152
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 163  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||||||||| |||||    
T  9894208 cacctactctggggactaccaagtcagtaaggaaatccactagtgtagtccttattc 9894152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 107 - 155
Target Start/End: Complemental strand, 10309631 - 10309583
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 155  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  10309631 cacctactctgggggctaccaagccaagaaggaagtccactagtgtagt 10309583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 20588895 - 20588800
Alignment:
Q  61 aaagtaaaatgcacag-tgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 156  Q
    |||||||||||||||| ||| ||||||||| ||||||||||  |    | ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  20588895 aaagtaaaatgcacagatga-tttgttaactcagttcggtgacaaacaaactactttgggggctaccaagccaggaaggaaatcaactagtgtagtc 20588800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 81 - 147
Target Start/End: Complemental strand, 10260298 - 10260231
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccact 147  Q
    ||||||||| |||||||||||||| |||||| | ||||||||||||||| ||||||||||||| ||||    
T  10260298 tttgttaactcagttcggtgcaacttcaccttcatctgggggctaccaaaccaggaaggaaattcact 10260231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 14687339 - 14687433
Alignment:
Q  62 aagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 156  Q
    |||||||||||| || ||| ||||||||| ||||||||| |||   |||||||| ||| ||||||||||| ||||||||||| |||||||||||||    
T  14687339 aagtaaaatgcatag-gaggttgttaacctagttcggtgacaaacacacctactatggaggctaccaagctaggaaggaaattcactagtgtagtc 14687433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 215
Target Start/End: Complemental strand, 23580121 - 23579987
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 180  Q
    ||||||||||||||||||| | |   |||||||| |||||| |||||||||| |||||||||| ||||||||||||| ||||  | || | | |||||||    
T  23580121 ttgttaacccagttcggtgactaacacacctactatgggggttaccaagccaagaaggaaatctactagtgtagtccttatttta-agttttcagcaaac 23580023  T
Q  181 tcctcgtttgc-actaatgacctaggacctacccgt 215  Q
    ||||||||| | ||||   |||||||||||||||||    
T  23580022 tcctcgtttacaactataaacctaggacctacccgt 23579987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 109 - 163
Target Start/End: Original strand, 6045340 - 6045393
Alignment:
Q  109 cctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 163  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  6045340 cctactctgggg-ctaccaagccaggaagaaaatccactagtgtagtccttattc 6045393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 9732905 - 9732836
Alignment:
Q  80 gtttgttaacccagttcggtgcaacgtcaccta-ctctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||| |||||| |||||||||||||||  ||||||||||||||||||| ||| ||||| |||||    
T  9732905 gtttgttaactcagttcagtgcaacgtcacctagatctgggggctaccaagccatgaacgaaattcacta 9732836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 12484267 - 12484336
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tct-gggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||| ||||||||| |||||||||||| ||| |||||||||||||| |||||||||||| ||||    
T  12484267 tttgttaaccaagttcggtgtaacgtcacctacatctggggggctaccaagctaggaaggaaatctacta 12484336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 82 - 153
Target Start/End: Original strand, 19353122 - 19353193
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgta 153  Q
    |||||||||||||||| || ||||  ||||||||||| ||||||| |||||| ||||||||||||||||||||    
T  19353122 ttgttaacccagttcgatgacaaca-cacctactctgagggctactaagccaagaaggaaatccactagtgta 19353193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 79 - 189
Target Start/End: Original strand, 21260503 - 21260614
Alignment:
Q  79 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 177  Q
    |||||||| | ||||||||||| |||   ||||||||||||||||||||||   |||||| ||||||| ||||||||||| ||||| | || ||| | ||    
T  21260503 agtttgttgatccagttcggtgacaaacacacctactctgggggctaccaacttaggaagaaaatccattagtgtagtccttattctaaagttctcaaca 21260602  T
Q  178 aactcctcgttt 189  Q
    |||| |||||||    
T  21260603 aactactcgttt 21260614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 11407091 - 11407041
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    ||||||||||||||||||||| |||||||||||| ||| ||| ||||||||    
T  11407091 cacctactctgggggctaccatgccaggaaggaagtccgctaatgtagtcc 11407041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 2392947 - 2392878
Alignment:
Q  80 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||| |||||||||||||||||||||||| | || |||||||||||| | ||| ||||| |||||    
T  2392947 gtttgttaatccagttcggtgcaacgtcacctacgtttgagggctaccaagctaagaatgaaattcacta 2392878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 148
Target Start/End: Original strand, 5299140 - 5299205
Alignment:
Q  84 gttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||||| ||| |||| || ||||  ||| |||||||||||||||||||||||||||||||    
T  5299140 gttaacccagtttggtacaacatcgcctagatctaggggctaccaagccaggaaggaaatccacta 5299205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 148
Target Start/End: Complemental strand, 21546971 - 21546902
Alignment:
Q  80 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||||||||||| ||||||| |||||||| ||||| ||||||||||  ||| ||||||| |||||    
T  21546971 gtttgttaacccagttccgtgcaacttcacctacatctggaggctaccaagttagggaggaaattcacta 21546902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 116 - 209
Target Start/End: Complemental strand, 10038861 - 10038767
Alignment:
Q  116 tgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacct 209  Q
    |||||||||| |||| |  ||||||||||||||||||||||| ||||| | || |||  |||||||| |||||| | ||| | ||||||||||||    
T  10038861 tgggggctactaagcaaataaggaaatccactagtgtagtccttattctaaagttctcggcaaactcttcgtttacaacttaagacctaggacct 10038767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 126
Target Start/End: Original strand, 24049508 - 24049572
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctacc 126  Q
    ||||||||  |||||||||||||| ||||| || |||||||||| ||||||||| || ||||||||    
T  24049508 aaagtaaatggcacagtgagtttgctaacctag-tcggtgcaacatcacctactttgagggctacc 24049572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 157; Significance: 1e-83; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 2 - 218
Target Start/End: Original strand, 8748951 - 8749167
Alignment:
Q  2 atgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaagtaaaatgcacagtgagtttgttaacccagttcggtgc 101  Q
    ||||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||||||  ||| |||||||||||||||||| ||| ||||    
T  8748951 atgttgaataaaatgtttcgaacactaagctaacacaagaaaagaaaaatgcaaagcataaagtaaagggcatagtgagtttgttaacccaattcagtgc 8749050  T
Q  102 aacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacc 201  Q
    ||||| | ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  8749051 aacgttagctactctggggactaccaagctaggaaggaaatccactagtgtagtccgtattcaatagctctcagcaagctcctcgtttgcactaatgacc 8749150  T
Q  202 taggacctacccgtact 218  Q
    ||||| |||||||||||    
T  8749151 taggatctacccgtact 8749167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 9031629 - 9031411
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggt 99  Q
    |||||||| | ||||||||||||||| ||||||||| || |||||||||| |||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  9031629 gatgttgagtgaaatgtttcgaacactaagctaaca-aagacaagaaaaacgcaaagcataaaagtaaaaagcacaatgagtttgttaacccagttcggt 9031531  T
Q  100 gcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatga 199  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||  |||||||    
T  9031530 gcaacgtcacctactctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgtgctaatga 9031431  T
Q  200 cctaggacctacccgtactg 219  Q
    ||||||||||||||||||||    
T  9031430 cctaggacctacccgtactg 9031411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 9036618 - 9036833
Alignment:
Q  1 gatgttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggt 99  Q
    |||||||| | ||||||||||||||| ||||||| | || ||||||||||||||||||||||| ||  || ||||||||| |||||||||||||||||||    
T  9036618 gatgttgagtgaaatgtttcgaacactaagctaata-aagacaagaaaaatgcaaagcataaaagtggaaggcacagtgaatttgttaacccagttcggt 9036716  T
Q  100 gcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatga 199  Q
    ||||| |||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| ||    
T  9036717 gcaacatcacatactctgggggctaccaaaccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttgcactaaaga 9036816  T
Q  200 cctaggacctacccgta 216  Q
    |||||||||||||||||    
T  9036817 cctaggacctacccgta 9036833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 295441 - 295586
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||| ||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  295441 cacagtgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattctatagct 295540  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    || |||||||||||||||| |||||| |||||||||||||||||||    
T  295541 ctcagcaaactcctcgtttacactaaagacctaggacctacccgta 295586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 61 - 215
Target Start/End: Original strand, 13913762 - 13913915
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    |||||||||  ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||| ||| ||    
T  13913762 aaagtaaaaaacacagagagtttgttaacccggttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccgctagtgtactcctta 13913860  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgt 215  Q
    |||  ||||||| |||||||||||||||| |||||| ||||||||| ||||||||    
T  13913861 ttctctagctctcagcaaactcctcgtttacactaaagacctaggatctacccgt 13913915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 17702387 - 17702533
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| |||   || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17702387 cacaatgagtttgttgacccagttcggtgacaaacacaactactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagct 17702486  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||    
T  17702487 ctcagcaaactcctcgtttacactatatgacctaggacctacccgta 17702533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 7479324 - 7479173
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    ||||| ||| |||||  |||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||||||||| ||    
T  7479324 aaagtgaaaagcacaaagagtttgttaactcagttcggtgcaacgtcgcctaatctgggggctaccaagccagga-ggaaatccactagtgtagtcctta 7479226  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctaccc 213  Q
    |||  ||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  7479225 ttctctagctctcagcaaactcctcgtttacactaaagacctaggacctaccc 7479173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 13917825 - 13917964
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 171  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||| ||| |||||  ||||||    
T  13917825 cacagagagtttgttaacccaattcggtgcaacgtcacctactctgggggctaccaagcca-gaaggaaatccaatagtgtactccttattctctagctc 13917923  T
Q  172 ttagcaaactcctcgtttgcactaatgacctaggacctacc 212  Q
    | |||||| ||||||||| |||||| |||||||||||||||    
T  13917924 tcagcaaattcctcgtttacactaaagacctaggacctacc 13917964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 62 - 216
Target Start/End: Complemental strand, 6581054 - 6580899
Alignment:
Q  62 aagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    |||||||| |||||   |||||||||||||||||||||| |||   |||||||||||  |||||||||||||| ||||||||||||||||||||||| ||    
T  6581054 aagtaaaaggcacaacaagtttgttaacccagttcggtgacaaacacacctactctgaaggctaccaagccagcaaggaaatccactagtgtagtcctta 6580955  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    ||| |||||||| |||||||||||||||| |||||| |||||||||||||||||||    
T  6580954 ttctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgta 6580899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 8224810 - 8224966
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| |||||   ||||||||||||||||| ||   ||| |||||||| |||||||||||||||||||||||||||||||||||||||||||| |    
T  8224810 aaagtaaaaggcacacaaagtttgttaacccagtttggcaaaac-tcacctacatctgggggctaccaagccaggaaggaaatccactagtgtagtcctt 8224908  T
Q  160 attcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    ||||||||||||| |||||||||||||||| ||||| |||||||| ||||||||||||    
T  8224909 attcaatagctctcagcaaactcctcgtttacactatatgacctaagacctacccgta 8224966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 77 - 216
Target Start/End: Original strand, 18547634 - 18547775
Alignment:
Q  77 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 175  Q
    |||||||||| ||||| ||||||| |||   ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| |    
T  18547634 tgagtttgttgacccaattcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaatagtgtagtccttattcaatagctcttgg 18547733  T
Q  176 caaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    |||||||||||||| ||||| |||||||| ||||||||||||    
T  18547734 caaactcctcgtttacactatatgacctaagacctacccgta 18547775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 213
Target Start/End: Complemental strand, 7496115 - 7495964
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    ||||||||| |||||  |||||||||||| |||||||||||||| || |||| | ||||||||| |||||||||| ||||||||||||||||||||| ||    
T  7496115 aaagtaaaaagcacaaagagtttgttaactcagttcggtgcaacatcgcctaatttgggggctatcaagccagga-ggaaatccactagtgtagtcctta 7496017  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctaccc 213  Q
    |||  ||||||| |||||||||||||||| |||||| ||||||||||||||||    
T  7496016 ttctctagctctcagcaaactcctcgtttacactaaagacctaggacctaccc 7495964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 18035084 - 18034928
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    |||||||||  |||| |||||||||||||||||||||||| |||   |||||||||| | |||||||||||||||||||||||||||||||||||||| |    
T  18035084 aaagtaaaagacacaatgagtttgttaacccagttcggtgacaaacacacctactcttgaggctaccaagccaggaaggaaatccactagtgtagtcctt 18034985  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||| |||| ||| |||||||||||| ||| ||| || |||||||||||||||||||    
T  18034984 attctataggtctcagcaaactcctcatttacaccaaagacctaggacctacccgta 18034928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 18064394 - 18064238
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    |||||||||  |||| |||||||||||||||||||||||| |||   |||||||||| | |||||||||| ||||||||||||||||||||||||||| |    
T  18064394 aaagtaaaagacacaatgagtttgttaacccagttcggtgacaaacacacctactctagaggctaccaaggcaggaaggaaatccactagtgtagtcctt 18064295  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||| |||||||| | |||||||||||||| |||||| ||||||||||||| |||||    
T  18064294 attctatagctctcaacaaactcctcgtttacactaaagacctaggacctaaccgta 18064238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 13790660 - 13790806
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| |||   |||||||| ||||||||||||||||| |||||||||  ||||||||||||| ||||||||||||    
T  13790660 cacaatgagtttgttgacccagttcggtgacaaacacacctactatgggggctaccaagccaagaaggaaatatactagtgtagtccttattcaatagct 13790759  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||    
T  13790760 ctcagcaaactcctcgtttacactatatgacctaggacctacccgta 13790806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 15636051 - 15635905
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||| | ||||||||||||| |||   |||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  15636051 cacaatgagtttgatgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaattcactagtgtagtccttattcaatagct 15635952  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || || ||||||||||||| ||||| |||| ||||||||||||||||    
T  15635951 ctcagtaaactcctcgtttacactatatgatctaggacctacccgta 15635905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 11558501 - 11558357
Alignment:
Q  66 aaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattca 164  Q
    ||||||||||| ||||||||||||| ||||||||| ||||  |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  11558501 aaaatgcacagagagtttgttaaccaagttcggtgacaaca-cacctactatggaggctaccaagccaggaaggaaatccactagtgtaatccgtattca 11558403  T
Q  165 atagctcttagcaaactcctcgtttgcactaatgacctaggacctacc 212  Q
    | |||| | ||||||  || ||||||||||||||||||||||||||||    
T  11558402 aaagctttcagcaaa--ccacgtttgcactaatgacctaggacctacc 11558357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 66 - 212
Target Start/End: Complemental strand, 11567770 - 11567626
Alignment:
Q  66 aaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattca 164  Q
    ||||||||||| ||||||||||||| ||||||||| ||||  |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  11567770 aaaatgcacagagagtttgttaaccaagttcggtgacaaca-cacctactatggaggctaccaagccaggaaggaaatccactagtgtaatccgtattca 11567672  T
Q  165 atagctcttagcaaactcctcgtttgcactaatgacctaggacctacc 212  Q
    | |||| | ||||||  || ||||||||||||||||||||||||||||    
T  11567671 aaagctttcagcaaa--ccacgtttgcactaatgacctaggacctacc 11567626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 77 - 212
Target Start/End: Complemental strand, 20748335 - 20748200
Alignment:
Q  77 tgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagc 176  Q
    |||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||| || |||||| | |    
T  20748335 tgagtttgttaacccagttcggtgcaacatcacctactttgggg-ctaccaagccaggaaggaaatccactagtgtagtccttattgaaaagctctcaac 20748237  T
Q  177 aaactcctcgtttgcac-taatgacctaggacctacc 212  Q
    |||||| |||||| ||| | |||||||||||||||||    
T  20748236 aaactcatcgtttacactttatgacctaggacctacc 20748200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 79 - 216
Target Start/End: Original strand, 11656010 - 11656148
Alignment:
Q  79 agtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaa 178  Q
    ||||||||||||||||| ||||||| |||||||||||||| |||||||||| |||||| ||||| |||||||||||||| ||| ||| |||||| |||||    
T  11656010 agtttgttaacccagtttggtgcaatgtcacctactctggaggctaccaagtcaggaaagaaattcactagtgtagtccttatccaaaagctctcagcaa 11656109  T
Q  179 actcctcgtttgcac-taatgacctaggacctacccgta 216  Q
    ||||||||||| ||| | |||||||||||||| ||||||    
T  11656110 actcctcgtttacactttatgacctaggacctgcccgta 11656148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 76 - 212
Target Start/End: Original strand, 28051121 - 28051258
Alignment:
Q  76 gtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctta 174  Q
    ||||||||||| |||||||| |||| |||   ||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||| |    
T  28051121 gtgagtttgttgacccagtttggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaatagtgtagtccttattctatagctctca 28051220  T
Q  175 gcaaactcctcgtttgcactaatgacctaggacctacc 212  Q
    ||||||||||||||| |||||| | |||||||| ||||    
T  28051221 gcaaactcctcgtttacactaaaggcctaggacatacc 28051258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 61 - 212
Target Start/End: Complemental strand, 12054635 - 12054485
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    ||||||||  ||||||||||||| ||||||||||||||||||| |||||||||||| |||| ||||||||  || |||||||| || |||||||||| ||    
T  12054635 aaagtaaatggcacagtgagtttcttaacccagttcggtgcaatgtcacctactctaggggataccaagctcgg-aggaaatctacaagtgtagtcctta 12054537  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacc 212  Q
    |||  ||||||| |||||||||||||||| |||||| ||||| |||||||||    
T  12054536 ttctctagctctcagcaaactcctcgtttacactaaagaccttggacctacc 12054485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 79 - 216
Target Start/End: Complemental strand, 17042924 - 17042786
Alignment:
Q  79 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 177  Q
    |||||||||| |||||| |||| |||   |||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||| |||||||| | ||    
T  17042924 agtttgttaaaccagtttggtgacaaacacacctactctggaggctaccaaggcaggaaggaaatccactagtgtagtccttattctatagctctcaaca 17042825  T
Q  178 aactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    ||||||||||||  ||||| |||||||||||||||||||    
T  17042824 aactcctcgtttaaactaaagacctaggacctacccgta 17042786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 77 - 212
Target Start/End: Complemental strand, 23954730 - 23954593
Alignment:
Q  77 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 175  Q
    |||||||||| | ||||||||||| |||   |||||||||||| |||||||||||||||||||||||||| |||| |||||  |||||||||||||| ||    
T  23954730 tgagtttgttgatccagttcggtggcaaacacacctactctggaggctaccaagccaggaaggaaatccattagtttagtcattattcaatagctctcag 23954631  T
Q  176 caaactcctcgtttgcacta-atgacctaggacctacc 212  Q
    |||||||||||||| ||||| |||||||||||||||||    
T  23954630 caaactcctcgtttacactatatgacctaggacctacc 23954593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 61 - 216
Target Start/End: Original strand, 18476901 - 18477055
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||| |||||  |||||||||||||||||||||  |||| |||||||| ||||||| |||||||||||||||||||||||||||||||||||| |    
T  18476901 aaagtaaaaggcacaaagagtttgttaacccagttcggcacaac-tcacctacatctgggg-ctaccaagccaggaaggaaatccactagtgtagtcctt 18476998  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||| | |||||| |||||||||||||||| |||| | ||| || ||||||| ||||    
T  18476999 attctaaagctctcagcaaactcctcgtttacacttaagacataagacctactcgta 18477055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 24195505 - 24195646
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtgcaacgt-cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| ||    |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  24195505 cacaatgagtttgttgacccagttcggtgaaaaacacacctactctgggg-ctaccaagccaagaaggaaatccactagtgtagtccttattcaatagct 24195603  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacc 212  Q
    || |||||||||||| ||| ||||| ||||||||||| |||||    
T  24195604 ctcagcaaactcctcatttacactatatgacctaggagctacc 24195646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 19633915 - 19634012
Alignment:
Q  119 gggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    ||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||| |||||| ||  |||||||||||||||    
T  19633915 gggctaccaagccaggaaggaaatccactagtgtagtccttattctatagctctcagcaaactcctcgtttacactaaagatataggacctacccgta 19634012  T

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Target: chr3; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 44452461 - 44452607
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagc 169  Q
    |||| |||||||||| ||||||||||||| |||   ||||||| ||| |||||| ||||||||||||||||||||||||||||||| | |||||||||||    
T  44452461 cacaatgagtttgttgacccagttcggtgacaaacacacctacgtctaggggct-ccaagccaggaaggaaatccactagtgtagttcttattcaatagc 44452559  T
Q  170 tcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    ||| |||||||||||||||| ||||| |||||| | ||||||||||||    
T  44452560 tctcagcaaactcctcgtttacactatatgacccatgacctacccgta 44452607  T

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Target: chr3; HSP #29
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 77 - 216
Target Start/End: Complemental strand, 13524853 - 13524714
Alignment:
Q  77 tgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagc 176  Q
    |||||||||| ||||||||||||   |   ||||||||||||||||||||||| || |||||||||||||| ||||||||| ||||| |||| ||| |||    
T  13524853 tgagtttgttgacccagttcggtcacaaaacacctactctgggggctaccaagtcaagaaggaaatccactggtgtagtccttattctatagttctcagc 13524754  T
Q  177 aaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    ||||||||| ||| |||||| ||||||| ||||| |||||    
T  13524753 aaactcctcatttacactaaagacctagtacctatccgta 13524714  T

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Target: chr3; HSP #30
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 107 - 182
Target Start/End: Complemental strand, 19532025 - 19531950
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactc 182  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| || ||||||    
T  19532025 cacctactttgggggctaccaagccaggaaggaaatccactagtgtcgtccttattcaatagctctcagaaaactc 19531950  T

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Target: chr3; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 147
Target Start/End: Complemental strand, 10082461 - 10082375
Alignment:
Q  62 aagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccact 147  Q
    ||||||||||||||    |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| ||||    
T  10082461 aagtaaaatgcacaagttgtttgttaacccagttcggtgcaacgtcacctacatctaggggctaccaagctaggaaggaaattcact 10082375  T

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Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 82 - 215
Target Start/End: Original strand, 31649682 - 31649814
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 180  Q
    ||||||| ||||||||||| |||   |||||||||||||  |||||||||||||||||||||||||| ||||||||| |||||  ||| ||| |||||||    
T  31649682 ttgttaatccagttcggtgacaaacacacctactctgggt-ctaccaagccaggaaggaaatccactcgtgtagtccttattc--tagttctcagcaaac 31649778  T
Q  181 tcctcgtttgc-actaatgacctaggacctacccgt 215  Q
    ||||||||| | |||   ||||||||||||||||||    
T  31649779 tcctcgtttacaactctagacctaggacctacccgt 31649814  T

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Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 148
Target Start/End: Complemental strand, 10189386 - 10189299
Alignment:
Q  62 aagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||||||||    |||||||||||||||||||||||||||||||||| | | ||||||||||||| ||||||||||| |||||    
T  10189386 aagtaaaatgcacaagttgtttgttaacccagttcggtgcaacgtcacctacatgtaggggctaccaagctaggaaggaaattcacta 10189299  T

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Target: chr3; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 78 - 180
Target Start/End: Complemental strand, 15686329 - 15686226
Alignment:
Q  78 gagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagc 176  Q
    ||||||||| |||||||||| || |||   |||||||||| |||||||||||||||||||||||||||| ||||||||||| ||||| | || ||| |||    
T  15686329 gagtttgttgacccagttcgatgacaaacacacctactctaggggctaccaagccaggaaggaaatccattagtgtagtccttattctaaagttctcagc 15686230  T
Q  177 aaac 180  Q
    ||||    
T  15686229 aaac 15686226  T

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Target: chr3; HSP #35
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 120 - 215
Target Start/End: Complemental strand, 21719054 - 21718959
Alignment:
Q  120 ggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgt 215  Q
    |||||||||||||||||||||||||||||||||||||| ||||| | || | | | |||| ||||||||| |||| | ||||||||| ||||||||    
T  21719054 ggctaccaagccaggaaggaaatccactagtgtagtccttattctaaagttttcaacaaaatcctcgtttacacttaagacctaggatctacccgt 21718959  T

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Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 1919367 - 1919281
Alignment:
Q  118 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgaccta 203  Q
    ||||||||||||||| ||||||||||||||  |||||||| |||||||||||| | ||||||||| |||||| ||||| ||||||||    
T  1919367 ggggctaccaagccaagaaggaaatccactgatgtagtccttattcaatagctttcagcaaactcttcgtttacactatatgaccta 1919281  T

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Target: chr3; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 82 - 189
Target Start/End: Complemental strand, 3552381 - 3552274
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 180  Q
    ||||||| ||||||||||| |||   |||||||||| |||||||||||||||||||| ||||||| ||||||||||| ||||| | || ||| | |||||    
T  3552381 ttgttaatccagttcggtgacaaacgcacctactcttggggctaccaagccaggaagaaaatccagtagtgtagtccttattcta-agttctaaacaaac 3552283  T
Q  181 tcctcgttt 189  Q
    |||||||||    
T  3552282 tcctcgttt 3552274  T

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Target: chr3; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 8531382 - 8531450
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcaccta-ctctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||||||||||||||||||||||||| |||||| |||  ||||||||| ||||||||||||||    
T  8531382 tttgttaacccagttcggtgcaacgtcacctacctctggtggcatccaagccagaaaggaaatccacta 8531450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 156
Target Start/End: Complemental strand, 14406821 - 14406722
Alignment:
Q  58 cataaagtaaaatgcacagtgag-tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 155  Q
    |||||||||||| ||||| |||| |||||||||||||||||||| |||   |||||||| || |||||||||||||||||||||||||||| | ||||||    
T  14406821 cataaagtaaaaggcaca-tgaggtttgttaacccagttcggtgacaaacacacctactttgtgggctaccaagccaggaaggaaatccaccaatgtagt 14406723  T

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Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 92 - 148
Target Start/End: Complemental strand, 20976147 - 20976090
Alignment:
Q  92 agttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  20976147 agttcggtgcaacttcacctacatctgggggctaccaaaccaggaaggaaatccacta 20976090  T

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Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 163
Target Start/End: Complemental strand, 287069 - 286978
Alignment:
Q  73 acagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 163  Q
    |||||||||||||||||| |||||| || |||   ||| |||| ||||| ||||||| ||||||||||||||||||||| |||||| |||||    
T  287069 acagtgagtttgttaacctagttcgatgacaaacacacttactatggggactaccaaaccaggaaggaaatccactagtatagtccttattc 286978  T

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Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 980506 - 980456
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    |||||| | ||||||||||||||| ||||||||||||||||||||||||||    
T  980506 cacctattttgggggctaccaagcaaggaaggaaatccactagtgtagtcc 980456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 8147709 - 8147641
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||||| ||||||||||| ||||||   ||| ||||||||||||||||||||||||| |||||    
T  8147709 tttgttaacccaattcggtgcaacttcacctttatctaggggctaccaagccaggaaggaaattcacta 8147641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 107 - 163
Target Start/End: Complemental strand, 21094842 - 21094787
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 163  Q
    |||||||||||||| |||||||| |||||||||||| |||||||||||||| |||||    
T  21094842 cacctactctgggg-ctaccaagtcaggaaggaaattcactagtgtagtccttattc 21094787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 80 - 130
Target Start/End: Original strand, 42243780 - 42243831
Alignment:
Q  80 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagc 130  Q
    ||||||||||||||||||||||||| |||||||| ||| |||||||||||||    
T  42243780 gtttgttaacccagttcggtgcaacatcacctacatcttggggctaccaagc 42243831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 19584078 - 19584010
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||||||||| |||||| ||||||||| ||| ||||   ||||||||||||| ||||||||||    
T  19584078 tttgttaacccagttcagtgcaatgtcacctacatctaggggaatccaagccaggaagaaaatccacta 19584010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 43902202 - 43902135
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||| ||| |||||||||||||||||||| | |||||||| |||||||||||| |||||| ||||    
T  43902202 tttgttaatccaattcggtgcaacgtcacctacatttgggggct-ccaagccaggaaagaaatctacta 43902135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 107 - 156
Target Start/End: Complemental strand, 3445146 - 3445098
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 156  Q
    ||||||||||| || ||| |||| ||||||||||||||||||||||||||    
T  3445146 cacctactctgagg-ctatcaagtcaggaaggaaatccactagtgtagtc 3445098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 80 - 148
Target Start/End: Original strand, 15962262 - 15962330
Alignment:
Q  80 gtttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||||||| |||||||||| ||||||||| |||   ||||||||||| ||||||||||| |||||    
T  15962262 gtttgttaacccacttcggtgcaatgtcacctacatct-aaggctaccaagctaggaaggaaattcacta 15962330  T

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Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 216
Target Start/End: Complemental strand, 18483444 - 18483403
Alignment:
Q  176 caaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    |||||||||||||| ||||| |||||||||||||||||||||    
T  18483444 caaactcctcgtttacactatatgacctaggacctacccgta 18483403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 86 - 123
Target Start/End: Original strand, 40199885 - 40199922
Alignment:
Q  86 taacccagttcggtgcaacgtcacctactctgggggct 123  Q
    ||||| ||||||||||||||| ||||||||||||||||    
T  40199885 taacctagttcggtgcaacgtaacctactctgggggct 40199922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 20962214 - 20962162
Alignment:
Q  97 ggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||| |||||||| |||||||| ||||||| ||||||||||| ||||||    
T  20962214 ggtgcaacttcacctacatctgggggttaccaagtcaggaaggaaagccacta 20962162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 145 - 212
Target Start/End: Complemental strand, 21254097 - 21254029
Alignment:
Q  145 actagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacc 212  Q
    ||||||||||||| ||||| |||| ||| | |||||||||||||  | ||||| |||||||||||||||    
T  21254097 actagtgtagtccttattctatagttctcaacaaactcctcgttcacaactaaagacctaggacctacc 21254029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 122; Significance: 1e-62; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 74 - 218
Target Start/End: Original strand, 18765659 - 18765804
Alignment:
Q  74 cagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctt 173  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||     
T  18765659 cagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctc 18765758  T
Q  174 agcaaactcctcgtttgcacta-atgacctaggacctacccgtact 218  Q
    || ||||||||||||||||||| |||||||||||| ||||||||||    
T  18765759 agtaaactcctcgtttgcactatatgacctaggacttacccgtact 18765804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 71 - 219
Target Start/End: Original strand, 29565993 - 29566140
Alignment:
Q  71 gcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29565993 gcacagtgagtttgttaactcagttcgatgcaacgtcccctactctgggg-ctaccaagccaggaaggaaatccactagtgtagtccttattcaatagct 29566091  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacccgtactg 219  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||    
T  29566092 ctcagcaaactcctcgtttgcactaatgacctaggacctacccgtactg 29566140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 75 - 219
Target Start/End: Complemental strand, 13315141 - 13314996
Alignment:
Q  75 agtgagtttgttaacccagttcggtgcaacgtcacctactctggggg-ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctt 173  Q
    ||||||||||||||||||||||||||||| |||||||||| |||||| |||| ||||||||||| ||||||||||||||||||| ||||||| ||||||     
T  13315141 agtgagtttgttaacccagttcggtgcaatgtcacctactatggggggctactaagccaggaagaaaatccactagtgtagtccttattcaagagctctc 13315042  T
Q  174 agcaaactcctcgtttgcactaatgacctaggacctacccgtactg 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  13315041 agcaaactcctcgtttgcactaatgacctaggacctacccgtactg 13314996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 19466712 - 19466556
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgc-aacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||  |||| |||||||| ||||||||||||||||  ||   ||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  19466712 aaagtaaatggcacggtgagtttcttaacccagttcggtgataaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcctt 19466613  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||| |||||||| || ||||||||| ||| |||||| |||||||||||||||||||    
T  19466612 attctatagctctcagaaaactcctcatttacactaaagacctaggacctacccgta 19466556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 77 - 215
Target Start/End: Complemental strand, 36398968 - 36398828
Alignment:
Q  77 tgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttag 175  Q
    |||||||||| ||||||||||||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||    
T  36398968 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctctcag 36398869  T
Q  176 caaactcctcgtttgcac-taatgacctaggacctacccgt 215  Q
    |||||||||||||| ||| | ||||||||||||||||||||    
T  36398868 caaactcctcgtttacactttatgacctaggacctacccgt 36398828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 23758606 - 23758752
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| |||   || |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |    
T  23758606 cacaatgagtttgttgacccagttcggtgacaaacacaactactctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagtt 23758705  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || | |||||||||||||| ||||| |||||||||||||||||||||    
T  23758706 ctcaacaaactcctcgtttacactatatgacctaggacctacccgta 23758752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 24790337 - 24790191
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| |||   ||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||| ||    
T  24790337 cacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagtcaggaaggaaatccactagagtagtccttattcaatatct 24790238  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||    
T  24790237 ctcagcaaactcctcgtttacactatatgacctaggacctacccgta 24790191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 114 - 216
Target Start/End: Complemental strand, 26860432 - 26860329
Alignment:
Q  114 tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacc 212  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  26860432 tctgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacc 26860333  T
Q  213 cgta 216  Q
    ||||    
T  26860332 cgta 26860329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 12910470 - 12910616
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||| ||||||||||||| |||    ||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||    
T  12910470 cacagtgagtttgttgacccagttcggtgacaaacatacctactctgggggctaccaagccaggaaggaaatccacaagtgtagtccttattcaatagct 12910569  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
     | ||||||||| |||||| ||||| ||| |||||||||||||||||    
T  12910570 ttcagcaaactcgtcgtttacactatatggcctaggacctacccgta 12910616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 81 - 194
Target Start/End: Original strand, 15328299 - 15328412
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaac 180  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||| |||||| |||||||    
T  15328299 tttgttaacccagttcggtgcaatgttacctactctgggggctaccaagccaagaaggaaatccattagtgtagtccttattcaaaagctctaagcaaac 15328398  T
Q  181 tcctcgtttgcact 194  Q
    ||||| ||| ||||    
T  15328399 tcctcatttacact 15328412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 22610873 - 22611019
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| |||   |||||||    ||||  ||||||  |||||||||||||||||||||||||| ||||||||||||    
T  22610873 cacaatgagtttgttgacccagttcggtgacaaacacacctacaaaaggggaaaccaagaaaggaaggaaatccactagtgtagtccttattcaatagct 22610972  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||||||||||| ||||| |||||||||||||||||||||    
T  22610973 ctcagcaaactcctcgtttacactatatgacctaggacctacccgta 22611019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 109 - 212
Target Start/End: Original strand, 21530404 - 21530507
Alignment:
Q  109 cctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcactaatgacctaggacc 208  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||| | ||||| |||||||| |||||| ||||||||| | |||| |||||||||||    
T  21530404 cctactctaggggctaccaagccaagaaggaaatccactagtgtagttcttattctatagctctcagcaaattcctcgtttacgctaaagacctaggacc 21530503  T
Q  209 tacc 212  Q
    ||||    
T  21530504 tacc 21530507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 61 - 219
Target Start/End: Complemental strand, 20649746 - 20649587
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    |||||||||  ||||||  ||||||||||||||||||| | |||   |||||||||| |||||||| ||| ||||||||||||||||||||||||||| |    
T  20649746 aaagtaaaagccacagttggtttgttaacccagttcggggacaaacacacctactctaggggctacaaagtcaggaaggaaatccactagtgtagtcctt 20649647  T
Q  160 attcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgtactg 219  Q
     ||| | || ||||||||||||||  |||| | ||| || |||||||||||||||||||||    
T  20649646 gttcta-agttcttagcaaactccaagtttacaacttatcacctaggacctacccgtactg 20649587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 218
Target Start/End: Original strand, 25347210 - 25347321
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctagg 205  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| ||||| | || ||||||||||||||  |||| | ||| | || |||||    
T  25347210 cacctactctgggggctaccaagccagaaaggaaacccactagtgtagtccttattcta-agttcttagcaaactccaagtttacaacttaagaactagg 25347308  T
Q  206 acctacccgtact 218  Q
    |||||||||||||    
T  25347309 acctacccgtact 25347321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 61 - 156
Target Start/End: Complemental strand, 21250387 - 21250290
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaaccc-agttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtc 156  Q
    ||||||||| |||||||||||||||| |||| ||||||||| |||   |||||||||||||||||||||||| |||||||||||||  ||||||||||    
T  21250387 aaagtaaaaggcacagtgagtttgttgaccccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatccgttagtgtagtc 21250290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 80 - 189
Target Start/End: Complemental strand, 24317981 - 24317871
Alignment:
Q  80 gtttgttaacccagttcggtg-caacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 177  Q
    ||||||||||||| ||||||| |||   ||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||| | || ||| ||||    
T  24317981 gtttgttaacccaattcggtgacaaacacacctacatctgggggttaccaagccaggaaggaaatccactagtgtagtccttattcta-agttctcagca 24317883  T
Q  178 aactcctcgttt 189  Q
    ||||||| ||||    
T  24317882 aactcctggttt 24317871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 31587467 - 31587548
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 163  Q
    ||||||||||||||||||| |||   |||||||||||| | |||||||||||||||||||||||||||||||||||| |||||    
T  31587467 ttgttaacccagttcggtgacaaacacacctactctggag-ctaccaagccaggaaggaaatccactagtgtagtccttattc 31587548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 157
Target Start/End: Original strand, 12952462 - 12952539
Alignment:
Q  81 tttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    |||||||||||||||||||| |||   |||||||| ||| |||||||||| |||||||||||||||||||||||||||    
T  12952462 tttgttaacccagttcggtgacaaacacacctactatggaggctaccaagtcaggaaggaaatccactagtgtagtcc 12952539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 31067654 - 31067586
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||| |||| ||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  31067654 tttgttaacctagtttggtgcaacgtcacctacgtctgggggctaccaattcaggaaggaaatccacta 31067586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 27111071 - 27111152
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 163  Q
    |||||||||||| |||||| |||   |||||||||||||| ||||||||||||||||||| |||||||||||||||| |||||    
T  27111071 ttgttaacccagatcggtgacaaacacacctactctgggg-ctaccaagccaggaaggaagtccactagtgtagtccttattc 27111152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 17395546 - 17395614
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||| |||||||||||||||||||| ||||  | ||||||||| |||||||||||||||||||||||    
T  17395546 tttgtttacccagttcggtgcaacgtcgcctaagtgtgggggctatcaagccaggaaggaaatccacta 17395614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 19198420 - 19198371
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  19198420 cacctactctgggg-ctatcaagccaggaaggaaatccactagtgtagtcc 19198371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 24283671 - 24283621
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    |||||| |||||||||||||||| ||||||||||||| |||||||||||||    
T  24283671 cacctattctgggggctaccaagtcaggaaggaaatctactagtgtagtcc 24283621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 17363507 - 17363575
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||| ||||||||||||||||| |||||||| |||||||| ||||||| |||||| ||||| |||||    
T  17363507 tttgttgacccagttcggtgcaacctcacctacatctgggggttaccaagtcaggaatgaaattcacta 17363575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 45550031 - 45550098
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||| ||||||||||||| |||||||| ||| |||||| |||||||||||| |||||||||||    
T  45550031 tttgttaaccaagttcggtgcaacatcacctacatctaggggct-ccaagccaggaacgaaatccacta 45550098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 24317380 - 24317222
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctac-tctggggg-ctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    ||||||||| ||||| |  |||||||||| |||||||||| |||   ||||||| |||||||| ||||||||  |  |||||||||||||||||||||||    
T  24317380 aaagtaaaaggcacaattggtttgttaactcagttcggtgacaaacacacctacatctggggggctaccaagttataaaggaaatccactagtgtagtcc 24317281  T
Q  158 gtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgta 216  Q
     ||||| | || ||| | |||||||||||||| | |||   |||||||||||||||||||    
T  24317280 ttattcta-agttctcaacaaactcctcgtttacaactctagacctaggacctacccgta 24317222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 145
Target Start/End: Original strand, 25867173 - 25867227
Alignment:
Q  92 agttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatcca 145  Q
    |||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||    
T  25867173 agtttggtgcaacgtcacctacatctggaggctaccaggccaggaaggaaatcca 25867227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 88 - 148
Target Start/End: Complemental strand, 20378387 - 20378326
Alignment:
Q  88 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||| |||||||||||| |||||||| |||||| ||||||||||||||||| |||| |||||    
T  20378387 acccggttcggtgcaacttcacctacatctgggagctaccaagccaggaagaaaatgcacta 20378326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 8163142 - 8163074
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||| ||||||| ||||| ||||| ||| ||| |||||||||||| ||||||| ||||||||||    
T  8163142 tttgttaacacagttcgatgcaatgtcacgtacgtcttggggctaccaagtcaggaagaaaatccacta 8163074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 30947324 - 30947392
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||| ||| |||| |||||||| |||||||| ||| |||||||||||| |||||||||||| |||||    
T  30947324 tttgttgacctagtttggtgcaacttcacctacatctaggggctaccaagtcaggaaggaaattcacta 30947392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 20476715 - 20476669
Alignment:
Q  111 tactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    |||| ||||||||||||||| ||||||||||| |||| |||||||||    
T  20476715 tactttgggggctaccaagctaggaaggaaattcactggtgtagtcc 20476669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 157
Target Start/End: Complemental strand, 20475409 - 20475368
Alignment:
Q  116 tgggggctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    ||||||| ||||||||||||| ||||| ||||||||||||||    
T  20475409 tgggggcaaccaagccaggaaagaaattcactagtgtagtcc 20475368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 21713517 - 21713452
Alignment:
Q  84 gttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||||| |||||||| |||||||| | | |||||  |||| |||||||||||||||||||    
T  21713517 gttaacccagtttggtgcaacatcacctacatgtaggggcatccaaaccaggaaggaaatccacta 21713452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 85 - 141
Target Start/End: Complemental strand, 28645830 - 28645773
Alignment:
Q  85 ttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaa 141  Q
    |||||| ||||| |||||||||||||||| || ||||| ||||||| |||||||||||    
T  28645830 ttaaccaagttctgtgcaacgtcacctacatccgggggataccaagtcaggaaggaaa 28645773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 81 - 113
Target Start/End: Original strand, 18593566 - 18593598
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac 113  Q
    ||||||||||||||||||||||| |||||||||    
T  18593566 tttgttaacccagttcggtgcaatgtcacctac 18593598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 189
Target Start/End: Complemental strand, 23801939 - 23801868
Alignment:
Q  117 gggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgttt 189  Q
    |||||||||||||| ||||| |||||||||||  ||||||| ||||| | || ||| | ||||||||||||||    
T  23801939 gggggctaccaagcaaggaatgaaatccactaaagtagtccttattcta-agttctcaccaaactcctcgttt 23801868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 27107556 - 27107639
Alignment:
Q  136 aggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgca-ctaatgacctaggacctacccgtactg 219  Q
    ||||||||||||| |||||||| ||||| | || ||| ||||||||||  |||| || || | ||||||||||||||||||||||    
T  27107556 aggaaatccactattgtagtccttattcta-agttctcagcaaactccaagtttacaacttaagacctaggacctacccgtactg 27107639  T

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Target: scaffold0143 (Bit Score: 119; Significance: 6e-61; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 61 - 219
Target Start/End: Original strand, 36268 - 36426
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgta 160  Q
    |||| |||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||    
T  36268 aaagaaaaaggcacagagagtttgttaatccagttcggtgcaacgtcacctactctgggggctaccaagccaggaagaaaatccactagtgtagtcctta 36367  T
Q  161 ttcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgtactg 219  Q
    ||||| |||||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  36368 ttcaaaagctctcagcaaacttctcgtttgcactaatgacctaggacctaccggtactg 36426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 62 - 215
Target Start/End: Complemental strand, 53112 - 52960
Alignment:
Q  62 aagtaaaatgcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtat 161  Q
    |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  53112 aagtaaatggcacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatccactagtgtagtccttat 53014  T
Q  162 tcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgt 215  Q
    || |||||||| |||||||||||||||| |||||| ||||||||||||||||||    
T  53013 tctatagctctcagcaaactcctcgtttacactaaagacctaggacctacccgt 52960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 75 - 219
Target Start/End: Original strand, 103090 - 103234
Alignment:
Q  75 agtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctctta 174  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |    
T  103090 agtgagtttgttaacccagttcagtgcaacgtcacctactctaggggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagctctga 103189  T
Q  175 gcaaactcctcgtttgcactaatgacctaggacctacccgtactg 219  Q
    |||||||||| |||||||| || ||||||||||||||||||||||    
T  103190 gcaaactccttgtttgcaccaaagacctaggacctacccgtactg 103234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 4 - 219
Target Start/End: Complemental strand, 17219 - 17002
Alignment:
Q  4 gttgaataaaatgtttcgaacaccaagctaacacaaaacaagaaaaatgcaaagcataaa-gtaaaatgcacagtgagtttgttaacccagttcggtgca 102  Q
    ||||||| | ||||||||||||  ||||||||| || ||||| ||||  |||| |||||| |||||  ||| ||||||||||||||||||||||||||||    
T  17219 gttgaatgatatgtttcgaacattaagctaacaaaagacaagtaaaacacaaaacataaaagtaaatggcatagtgagtttgttaacccagttcggtgca 17120  T
Q  103 acgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacc 201  Q
    |||||||||||| |||||   ||||| |||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||| ||||||    
T  17119 acgtcacctactatggggctaaccaatccaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttgcactatatgacc 17020  T
Q  202 taggacctacccgtactg 219  Q
    ||| ||| ||||||||||    
T  17019 tagtacccacccgtactg 17002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 97; Significance: 9e-48; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 72 - 215
Target Start/End: Complemental strand, 16391 - 16247
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctc 171  Q
    ||||||||||||||||||||||||||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  16391 cacagtgagtttgttaacccagttcggtgcaacgtcaaccactttgggggctaccaagccaggaaggaaatccactagtgtagtccttattcaaaagctc 16292  T
Q  172 ttagcaaactcctcgtttgcac-taatgacctaggacctacccgt 215  Q
    | | |||||||||| ||| ||| | ||||||||||||||||||||    
T  16291 tcaacaaactcctcatttacactttatgacctaggacctacccgt 16247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 91; Significance: 3e-44; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 36986 - 37132
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| |||   |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  36986 cacaatgagtttgttgacccagttcggtgacaaacacacctactctggaggctaccaagccaggaaggaaatccactagtgtagtccttattcaatagct 37085  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||||||||||| ||| | |||||||||||||||||||||    
T  37086 ctcagcaaactcctcgtttacaccatatgacctaggacctacccgta 37132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 79 - 219
Target Start/End: Original strand, 3111 - 3249
Alignment:
Q  79 agtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagca 177  Q
    |||||||||| ||||||||||| ||||  |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||||| ||||    
T  3111 agtttgttaatccagttcggtgacaaca-cacctactctggaggctaccaagccaggaaggaaatccactagtgtagtacgtattcaacagctctcagca 3209  T
Q  178 aactcctcgtttgcactaatgacctaggacctacccgtactg 219  Q
    ||  || |||||||||||||||||||||||||||||||||||    
T  3210 aa--ccacgtttgcactaatgacctaggacctacccgtactg 3249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 25852 - 25706
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| ||||||| || ||||||||||||| |||   ||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||    
T  25852 cacaatgagtttattgacccagttcggtgacaaacacacctactctgggagctaccaagccaggaaggaaatccactggtgtagtccttattcaatagct 25753  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || | |||||||||||||| ||||| |||||||||||||||||||||    
T  25752 ctcaacaaactcctcgtttacactagatgacctaggacctacccgta 25706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 72 - 212
Target Start/End: Original strand, 40316 - 40457
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||| ||||||||| ||| ||||  |||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||| ||||    
T  40316 cacagtgagtttgttgacccagttcagtgacaaca-cacctactctgggggctaccaagctaggaaggaaatccactagtgtagtccttattcaaaagct 40414  T
Q  171 cttagcaaactcctcgtttgcac-taatgacctaggacctacc 212  Q
    || |||||||||||||||| ||| | |||||||||||||||||    
T  40415 ctcagcaaactcctcgtttacactttatgacctaggacctacc 40457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 17467 - 17311
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    |||||||||  ||||||||||||||| ||||||||  ||| |||   ||||||||||||||||||||||| ||||||| ||||||||||||||||||| |    
T  17467 aaagtaaaaaacacagtgagtttgttgacccagtttcgtgacaaacacacctactctgggggctaccaagtcaggaagaaaatccactagtgtagtcctt 17368  T
Q  160 attcaatagctcttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    |||| |||||||| |||||| ||||||||  |||||| |||||||||||||||||||    
T  17367 attctatagctctcagcaaattcctcgttaacactaaagacctaggacctacccgta 17311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 111 - 216
Target Start/End: Complemental strand, 110395 - 110289
Alignment:
Q  111 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacct 209  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| ||||||||||||||    
T  110395 tactctaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacct 110296  T
Q  210 acccgta 216  Q
    |||||||    
T  110295 acccgta 110289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 72 - 216
Target Start/End: Original strand, 26385 - 26530
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||| ||||| ||||||| |||   |||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||  |||||    
T  26385 cacagtgagtttgttgacccaattcggtgacaaacacacctactatgggggctaccaagcaaggaaggaaatccactagtgtagtccttattctgtagct 26484  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
    || | |||||||||| ||| |||||| |||||||||||||||||||    
T  26485 ctcaacaaactcctcatttacactaaagacctaggacctacccgta 26530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 213
Target Start/End: Complemental strand, 7718 - 7576
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||| ||| ||||||||| |||   ||| |||||| ||||||||||||||||||||||||| |||||||||||||| ||||| ||||||    
T  7718 cacagtgagtttgttgacctagttcggtgacaaacacacttactctaggggctaccaagccaggaaggaaattcactagtgtagtccttattctatagct 7619  T
Q  171 cttagcaaactcctcgtttgcactaatgacctaggacctaccc 213  Q
    || | |||||||||| ||| |||||| ||||||||||||||||    
T  7618 ctcaacaaactcctcatttacactaaagacctaggacctaccc 7576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 216
Target Start/End: Complemental strand, 18302 - 18160
Alignment:
Q  75 agtgagtttgttaacccagttcggtg-caacgtcacctactctggggg-ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctct 172  Q
    |||||||||||| ||| ||||||||| |||   ||||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||| ||||||||    
T  18302 agtgagtttgttgacctagttcggtgacaaacacacctactctggggggctacgaagccaagaaggaaatccactagtgtagtccttattctatagctct 18203  T
Q  173 tagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
     ||||||||||||| || |||||| || ||||||||||||||||    
T  18202 cagcaaactcctcgattacactaaaga-ctaggacctacccgta 18160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 216
Target Start/End: Complemental strand, 27696 - 27554
Alignment:
Q  75 agtgagtttgttaacccagttcggtg-caacgtcacctactctggggg-ctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctct 172  Q
    |||||||||||| ||| ||||||||| |||   ||||||||||||||| |||| |||||| |||||||||||||||||||||||| ||||| ||||||||    
T  27696 agtgagtttgttgacctagttcggtgacaaacacacctactctggggggctacgaagccaagaaggaaatccactagtgtagtccttattctatagctct 27597  T
Q  173 tagcaaactcctcgtttgcactaatgacctaggacctacccgta 216  Q
     ||||||||||||| || |||||| || ||||||||||||||||    
T  27596 cagcaaactcctcgattacactaaaga-ctaggacctacccgta 27554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 107 - 212
Target Start/End: Original strand, 36609 - 36715
Alignment:
Q  107 cacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgcacta-atgacctagg 205  Q
    |||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||| ||||||||||    
T  36609 cacctactctggaggctaccaagctaggaaggaaatccactagtgtagtccttattcaatagctctcaacaaactcctcgtttacactatatgacctagg 36708  T
Q  206 acctacc 212  Q
    |||||||    
T  36709 acctacc 36715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 72 - 215
Target Start/End: Original strand, 87716 - 87861
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctac-tctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagc 169  Q
    |||| |||||||||| ||||||||||||| |||   ||||||| | |||||||| |||||| |||||||||||||||||||||||||| |||||||||||    
T  87716 cacaatgagtttgttgacccagttcggtgacaaacacacctacgtatgggggct-ccaagctaggaaggaaatccactagtgtagtccttattcaatagc 87814  T
Q  170 tcttagcaaactcctcgtttgcacta-atgacctaggacctacccgt 215  Q
    ||| |||||||||||||||| ||||| ||||||||||||||||||||    
T  87815 tctcagcaaactcctcgtttacactatatgacctaggacctacccgt 87861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 72 - 210
Target Start/End: Complemental strand, 50270 - 50130
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||||||||||| |||   |||||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  50270 cacaatgagtttgttgacccagttcggtgacaaacacacctactctaggggctaccaagtcaggaaggaaatccactagtgtagtccttattcaatagct 50171  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggaccta 210  Q
    || | |||| ||||||||| ||||| |||||||| ||||||    
T  50170 ctcaacaaaatcctcgtttacactatatgacctacgaccta 50130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 216
Target Start/End: Complemental strand, 61662 - 61506
Alignment:
Q  61 aaagtaaaatgcacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgt 159  Q
    ||||||||  ||||| |||||||||| ||||||||||||| |||   ||  |||||||||||||||||||||| |||||||||||||||||||||| | |    
T  61662 aaagtaaatagcacaatgagtttgttgacccagttcggtgacaaacacat-tactctgggggctaccaagccaagaaggaaatccactagtgtagttctt 61564  T
Q  160 attcaatagctcttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    ||||||||||||| ||||||||| | |||| ||||| |||||||| ||||||||||||    
T  61563 attcaatagctctcagcaaactcattgtttacactatatgacctaagacctacccgta 61506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 16803 - 16657
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    ||||||||||||||| || |||||||||| |||   ||||||||| ||||||||||||||||| |||||||||||||| |||||||| ||||||| ||||    
T  16803 cacagtgagtttgttgactcagttcggtgacaaacacacctactccgggggctaccaagccagaaaggaaatccactactgtagtccttattcaaaagct 16704  T
Q  171 cttagcaaactcctcgtttgcac-taatgacctaggacctacccgta 216  Q
     | |||||||||||| ||| ||| | |||||||||||||||||||||    
T  16703 ataagcaaactcctcatttacactttatgacctaggacctacccgta 16657  T

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Target: scaffold0185 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 72 - 216
Target Start/End: Complemental strand, 2537 - 2391
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| |||||||||| ||||| ||||||| |||   |||||||| | ||||||| ||||||||||||||| |||| ||||||||||| ||||||||||||    
T  2537 cacaatgagtttgttgacccatttcggtgacaagcacacctactttaggggctatcaagccaggaaggaagtccaatagtgtagtccttattcaatagct 2438  T
Q  171 cttagcaaactcctcgtttgcacta-atgacctaggacctacccgta 216  Q
    || |||||||||| ||||| ||||| ||||||||||||||| |||||    
T  2437 ctcagcaaactccccgtttacactatatgacctaggacctagccgta 2391  T

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Target: scaffold0333 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 72 - 203
Target Start/End: Original strand, 5627 - 5759
Alignment:
Q  72 cacagtgagtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagct 170  Q
    |||| ||| |||||| ||||||||||||| |||   |||||||||| ||| ||||||||| ||||||||||||||| |||||||||| ||||||||||||    
T  5627 cacaatgaatttgttgacccagttcggtgtcaaacacacctactctaggg-ctaccaagcaaggaaggaaatccacaagtgtagtccttattcaatagct 5725  T
Q  171 cttagcaaactcctcgtttgcacta-atgaccta 203  Q
    || ||||||||| |||||| ||||| ||||||||    
T  5726 ctcagcaaactcatcgtttacactatatgaccta 5759  T

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Target: scaffold0035 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 118 - 215
Target Start/End: Original strand, 37393 - 37491
Alignment:
Q  118 ggggctaccaagccaggaaggaaatccactagtgtagtccgtattcaatagctcttagcaaactcctcgtttgc-actaatgacctaggacctacccgt 215  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||| | || ||| |||||||||||| ||| | ||| | ||||||||||||||||||    
T  37393 ggggctaccaagtcaggaaggaaatccactagtgtagtccttattctaaagttctcagcaaactcctcatttacaacttaagacctaggacctacccgt 37491  T

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Target: scaffold0072 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 81 - 148
Target Start/End: Original strand, 18540 - 18607
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||| ||||||||||||||||| ||||||||| | ||||||||||||||| |||||||||||||||    
T  18540 tttgttgacccagttcggtgcaacttcacctacttttggggctaccaagccatgaaggaaatccacta 18607  T

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Target: scaffold0062 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 81 - 145
Target Start/End: Complemental strand, 2247 - 2182
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatcca 145  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||    
T  2247 tttgttcacccagttcggtgcaacttcacctacatctgggggctaccaagccaggaaagaaatcca 2182  T

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Target: scaffold0015 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 111 - 163
Target Start/End: Original strand, 202416 - 202468
Alignment:
Q  111 tactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 163  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  202416 tactctgggggctaccaagtcaggaaggaaatccactagtgtagtccttattc 202468  T

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Target: scaffold0505 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 157
Target Start/End: Complemental strand, 10204 - 10128
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtcc 157  Q
    ||||||||||||||||||| |||   ||| |||||| |||||||||||| ||| |||||||||||||||||||||||    
T  10204 ttgttaacccagttcggtgacaaatacacttactcttggggctaccaagtcagaaaggaaatccactagtgtagtcc 10128  T

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Target: scaffold0205 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 148
Target Start/End: Original strand, 9969 - 10030
Alignment:
Q  88 acccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    ||||||||||||||||| | |||||| |||||||||||| |||||||||||||||| |||||    
T  9969 acccagttcggtgcaacctaacctacatctgggggctacaaagccaggaaggaaattcacta 10030  T

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Target: scaffold0423 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0423
Description:

Target: scaffold0423; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 80 - 155
Target Start/End: Original strand, 13596 - 13672
Alignment:
Q  80 gtttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagt 155  Q
    ||||||||| ||||||||||| |||   |||||||||| |||||||||||||||||||| |||| || |||||||||    
T  13596 gtttgttaatccagttcggtgacaaacacacctactctaggggctaccaagccaggaagaaaattcattagtgtagt 13672  T

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Target: scaffold0054 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 8822 - 8754
Alignment:
Q  81 tttgttaacccagttcggtgcaacgtcacctac-tctgggggctaccaagccaggaaggaaatccacta 148  Q
    |||||||||||||| |||||||||||||||||| ||||||| |  ||||||||||||| ||||| ||||    
T  8822 tttgttaacccagtacggtgcaacgtcacctacatctggggacatccaagccaggaagaaaatctacta 8754  T

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Target: scaffold0520 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 82 - 163
Target Start/End: Original strand, 5409 - 5491
Alignment:
Q  82 ttgttaacccagttcggtg-caacgtcacctactctgggggctaccaagccaggaaggaaatccactagtgtagtccgtattc 163  Q
    ||||||||||||||||||| |||   |||||||||| ||||||   ||| ||| ||||||||||||||||||||||| |||||    
T  5409 ttgttaacccagttcggtgacaaacacacctactctaggggctgttaagtcagaaaggaaatccactagtgtagtccttattc 5491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 126
Target Start/End: Original strand, 3650 - 3694
Alignment:
Q  83 tgttaacccagttcggtgcaacgtcacctac-tctgggggctacc 126  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||    
T  3650 tgttaaccgagttcagtgcaacgtcacctacgtctgggggctacc 3694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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