View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20608_low_4 (Length: 618)
Name: NF20608_low_4
Description: NF20608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20608_low_4 |
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Alignment Details
Target: chr7 (Bit Score: 457; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 457; E-Value: 0
Query Start/End: Original strand, 7 - 491
Target Start/End: Complemental strand, 41404592 - 41404108
Alignment:
| Q |
7 |
tagataatactcgaattttggaagtccacacaacttgtataacgaaccaaaaatactccctcaatttttattagagaagtcttttgaagatgcattcatt |
106 |
Q |
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| T |
41404592 |
tagataaaactcgaattttggaagtccacacaatttgtataaccaaccaaaaatactccctcaatttttattagagaagtcttttgaagatgcattcatt |
41404493 |
T |
|
| Q |
107 |
ccttctcatagtttatctgaccagagacagttcacgtaaacatatatcacaatcacaaccttaaatcttcacgaacatcacattggacctttggcatgca |
206 |
Q |
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| T |
41404492 |
ccttctcatagtttatctgaccagagacggttcacgtaaacatataccacaatcacaaccttaaatcttcacgaacatcacattggacctttggcatgca |
41404393 |
T |
|
| Q |
207 |
catatttcatatggtttctgttcaatcgacttagaaggaagtcaaggaacacaattgcttgcgagtagagcacatgccaaaaatgactctaattgactcg |
306 |
Q |
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| T |
41404392 |
catatttcatatggtttctgttcaatcgacttagaaggaagtcaaggaacacaattgcttgcgagtagagcacatgccaaaaatgactctaattgactcg |
41404293 |
T |
|
| Q |
307 |
taatctatcaaacatgtcttatagggtctgattcctactttcatacacatcatttcattgcagccacacgattgaaggtcttttgactgccaaaaccaga |
406 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |
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| T |
41404292 |
taatctatcaaacatgtcttatagggtctgattcctactttcatacacatcatttcattgcagccacacgattgaaggtcttttgactgcgaataccaga |
41404193 |
T |
|
| Q |
407 |
atctactatttatagcttcaacgtaaatgtgatatttttccgtgattttgtaagtttccatgcatatccaaacaaatgtttatac |
491 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41404192 |
atctactatttatagcttcaacgtaaatgtgatatttttccgtgattttgtaagtttccatgcatatccaaacaaatgtttatac |
41404108 |
T |
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