View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20608_low_5 (Length: 588)

Name: NF20608_low_5
Description: NF20608
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20608_low_5
NF20608_low_5
[»] chr4 (71 HSPs)
chr4 (18-314)||(48417590-48417887)
chr4 (205-314)||(49936498-49936603)
chr4 (233-310)||(23708156-23708233)
chr4 (205-314)||(29114223-29114331)
chr4 (233-314)||(37756703-37756784)
chr4 (205-314)||(45823538-45823646)
chr4 (205-309)||(51258724-51258827)
chr4 (211-314)||(32948506-32948609)
chr4 (191-310)||(55509856-55509974)
chr4 (328-374)||(653785-653831)
chr4 (204-314)||(368051-368158)
chr4 (233-314)||(3126992-3127082)
chr4 (189-306)||(34236513-34236629)
chr4 (238-314)||(47063707-47063783)
chr4 (195-306)||(46176925-46177035)
chr4 (239-314)||(49668094-49668169)
chr4 (195-278)||(54205812-54205894)
chr4 (233-310)||(17622456-17622542)
chr4 (204-298)||(35959178-35959271)
chr4 (229-278)||(36151396-36151445)
chr4 (205-278)||(46176494-46176566)
chr4 (236-314)||(48620310-48620390)
chr4 (205-314)||(51974311-51974418)
chr4 (233-314)||(7182171-7182262)
chr4 (238-314)||(9020959-9021035)
chr4 (242-314)||(28880020-28880092)
chr4 (262-314)||(47669859-47669911)
chr4 (240-314)||(8828190-8828262)
chr4 (271-314)||(13270255-13270298)
chr4 (337-400)||(28031577-28031640)
chr4 (271-314)||(32060704-32060747)
chr4 (328-386)||(12274267-12274325)
chr4 (228-314)||(31428816-31428902)
chr4 (233-314)||(24682976-24683057)
chr4 (483-561)||(28031386-28031466)
chr4 (234-314)||(9836752-9836831)
chr4 (233-314)||(20533937-20534028)
chr4 (338-386)||(26429196-26429244)
chr4 (274-314)||(49404603-49404643)
chr4 (275-314)||(13270015-13270054)
chr4 (240-314)||(13984953-13985028)
chr4 (271-314)||(16535749-16535792)
chr4 (271-314)||(21730307-21730350)
chr4 (271-314)||(24279972-24280015)
chr4 (204-271)||(25843826-25843892)
chr4 (204-299)||(27938790-27938884)
chr4 (271-314)||(38317208-38317251)
chr4 (271-314)||(41363792-41363835)
chr4 (197-272)||(44590248-44590323)
chr4 (238-314)||(54806485-54806571)
chr4 (272-311)||(56504452-56504491)
chr4 (268-314)||(8827800-8827846)
chr4 (213-314)||(17115116-17115217)
chr4 (328-386)||(26006079-26006137)
chr4 (189-251)||(27485295-27485356)
chr4 (280-314)||(28710396-28710430)
chr4 (280-314)||(40423053-40423087)
chr4 (280-314)||(45022520-45022554)
chr4 (233-271)||(45971570-45971608)
chr4 (242-314)||(6836424-6836501)
chr4 (280-313)||(9046396-9046429)
chr4 (205-278)||(12708860-12708932)
chr4 (233-278)||(31530029-31530074)
chr4 (273-310)||(38366087-38366124)
chr4 (338-386)||(9034972-9035020)
chr4 (338-386)||(22359245-22359293)
chr4 (338-386)||(35853246-35853294)
chr4 (233-273)||(38317260-38317300)
chr4 (234-274)||(42649494-42649534)
chr4 (233-273)||(42650646-42650686)
chr4 (238-302)||(54240681-54240745)
[»] chr8 (67 HSPs)
chr8 (328-561)||(26006771-26007021)
chr8 (233-312)||(79605-79684)
chr8 (233-314)||(41866107-41866188)
chr8 (206-298)||(10605153-10605244)
chr8 (239-314)||(34148559-34148632)
chr8 (195-309)||(13258472-13258582)
chr8 (328-399)||(40175142-40175213)
chr8 (247-313)||(6943447-6943513)
chr8 (240-314)||(36837478-36837552)
chr8 (332-397)||(12051461-12051526)
chr8 (205-314)||(26772632-26772740)
chr8 (337-406)||(43234198-43234267)
chr8 (332-400)||(12030340-12030408)
chr8 (240-314)||(16424164-16424239)
chr8 (195-314)||(31149886-31150003)
chr8 (204-270)||(28169859-28169924)
chr8 (228-298)||(31305781-31305850)
chr8 (233-314)||(34336050-34336131)
chr8 (195-306)||(35376625-35376736)
chr8 (204-272)||(40985106-40985173)
chr8 (271-314)||(1942033-1942076)
chr8 (271-314)||(2474747-2474790)
chr8 (271-314)||(4734476-4734519)
chr8 (196-259)||(16024598-16024660)
chr8 (191-278)||(21173884-21173970)
chr8 (191-278)||(23932584-23932670)
chr8 (271-314)||(34272573-34272616)
chr8 (247-298)||(39778838-39778889)
chr8 (204-298)||(39405052-39405144)
chr8 (238-300)||(45308298-45308360)
chr8 (273-314)||(3404554-3404595)
chr8 (488-561)||(12030220-12030293)
chr8 (488-561)||(12051337-12051410)
chr8 (210-267)||(24340015-24340071)
chr8 (265-310)||(43239721-43239766)
chr8 (233-314)||(1839800-1839891)
chr8 (338-386)||(11503073-11503121)
chr8 (338-386)||(32578138-32578186)
chr8 (204-271)||(11229256-11229322)
chr8 (248-314)||(15108244-15108311)
chr8 (271-314)||(31297328-31297371)
chr8 (271-314)||(36102870-36102913)
chr8 (255-314)||(40999162-40999221)
chr8 (255-314)||(44251548-44251607)
chr8 (270-308)||(12595370-12595408)
chr8 (328-386)||(25663592-25663650)
chr8 (272-314)||(27085407-27085449)
chr8 (272-314)||(29584233-29584275)
chr8 (268-314)||(39193986-39194032)
chr8 (272-314)||(43007757-43007799)
chr8 (268-314)||(43733100-43733146)
chr8 (269-314)||(12506176-12506221)
chr8 (233-314)||(14581738-14581819)
chr8 (269-314)||(23963031-23963076)
chr8 (233-278)||(25033390-25033435)
chr8 (186-314)||(28416151-28416277)
chr8 (346-387)||(31037712-31037753)
chr8 (233-311)||(36906197-36906285)
chr8 (204-273)||(39418037-39418105)
chr8 (268-309)||(42589844-42589885)
chr8 (269-309)||(1111120-1111160)
chr8 (177-221)||(4428843-4428887)
chr8 (266-298)||(8228596-8228628)
chr8 (274-314)||(13865072-13865112)
chr8 (274-314)||(29612052-29612092)
chr8 (338-386)||(32282847-32282895)
chr8 (274-314)||(34349776-34349816)
[»] chr5 (56 HSPs)
chr5 (195-305)||(9096292-9096401)
chr5 (192-314)||(19389808-19389928)
chr5 (205-314)||(37908984-37909092)
chr5 (233-314)||(38568357-38568438)
chr5 (191-273)||(6491153-6491234)
chr5 (233-314)||(14570030-14570111)
chr5 (228-310)||(3676499-3676581)
chr5 (191-314)||(5772710-5772832)
chr5 (238-314)||(18675703-18675779)
chr5 (204-306)||(12150565-12150665)
chr5 (205-314)||(38289299-38289414)
chr5 (205-310)||(10437969-10438073)
chr5 (242-302)||(32125265-32125325)
chr5 (195-314)||(35708742-35708861)
chr5 (191-314)||(10843013-10843135)
chr5 (185-314)||(25626584-25626713)
chr5 (328-386)||(30796792-30796850)
chr5 (261-314)||(5696560-5696613)
chr5 (233-314)||(31632857-31632938)
chr5 (242-314)||(13293964-13294036)
chr5 (262-314)||(17668114-17668166)
chr5 (271-314)||(10295541-10295584)
chr5 (271-314)||(17092955-17092998)
chr5 (271-314)||(27480152-27480195)
chr5 (205-314)||(32824645-32824749)
chr5 (233-312)||(35868840-35868928)
chr5 (271-314)||(37508370-37508413)
chr5 (267-314)||(41923212-41923259)
chr5 (223-314)||(1658177-1658278)
chr5 (255-312)||(13450511-13450568)
chr5 (192-273)||(13569333-13569413)
chr5 (238-314)||(3925771-3925847)
chr5 (231-280)||(11168244-11168295)
chr5 (280-312)||(35705128-35705160)
chr5 (271-314)||(2021038-2021081)
chr5 (271-314)||(26149661-26149704)
chr5 (268-314)||(1935087-1935133)
chr5 (268-314)||(8944100-8944146)
chr5 (268-314)||(15974395-15974441)
chr5 (328-386)||(29242102-29242160)
chr5 (328-386)||(36978794-36978852)
chr5 (272-314)||(43496861-43496903)
chr5 (273-314)||(4841689-4841730)
chr5 (205-314)||(9684771-9684879)
chr5 (240-309)||(29709540-29709609)
chr5 (265-314)||(35683453-35683502)
chr5 (233-278)||(35701070-35701115)
chr5 (233-278)||(39649581-39649626)
chr5 (265-314)||(41695029-41695078)
chr5 (199-259)||(5836865-5836924)
chr5 (338-386)||(9609506-9609554)
chr5 (262-314)||(15770090-15770141)
chr5 (255-299)||(24022851-24022895)
chr5 (236-304)||(32750654-32750722)
chr5 (274-314)||(38302338-38302378)
chr5 (271-307)||(41638429-41638465)
[»] scaffold0036 (1 HSPs)
scaffold0036 (173-304)||(82746-82877)
[»] chr7 (60 HSPs)
chr7 (198-314)||(38137917-38138032)
chr7 (205-314)||(38505324-38505432)
chr7 (195-314)||(6746559-6746677)
chr7 (233-314)||(5968033-5968114)
chr7 (335-400)||(21223039-21223104)
chr7 (233-314)||(43348219-43348300)
chr7 (196-311)||(30183822-30183934)
chr7 (191-314)||(33872100-33872223)
chr7 (204-314)||(31891268-31891377)
chr7 (233-314)||(19644311-19644393)
chr7 (328-439)||(34899103-34899221)
chr7 (233-305)||(46745587-46745658)
chr7 (187-312)||(41471413-41471537)
chr7 (233-314)||(45510362-45510443)
chr7 (233-314)||(41002231-41002322)
chr7 (205-308)||(43741688-43741790)
chr7 (238-314)||(44720104-44720182)
chr7 (233-314)||(43188880-43188958)
chr7 (205-278)||(425319-425392)
chr7 (205-278)||(16805593-16805665)
chr7 (205-310)||(45940394-45940498)
chr7 (233-278)||(47276028-47276073)
chr7 (262-314)||(14676279-14676331)
chr7 (233-314)||(28437522-28437613)
chr7 (205-276)||(7181745-7181815)
chr7 (204-314)||(31355781-31355890)
chr7 (272-314)||(43665149-43665191)
chr7 (280-314)||(45066790-45066824)
chr7 (265-314)||(38235846-38235895)
chr7 (233-314)||(3658491-3658582)
chr7 (338-386)||(25611367-25611415)
chr7 (266-314)||(30081025-30081073)
chr7 (271-314)||(23620773-23620816)
chr7 (235-314)||(30081390-30081469)
chr7 (271-314)||(33406612-33406655)
chr7 (237-314)||(34399030-34399104)
chr7 (269-312)||(42220093-42220136)
chr7 (271-314)||(42620332-42620375)
chr7 (328-371)||(42885899-42885942)
chr7 (205-251)||(12884781-12884826)
chr7 (272-314)||(17818345-17818387)
chr7 (328-386)||(23362376-23362434)
chr7 (198-308)||(24924576-24924684)
chr7 (204-298)||(32429937-32430029)
chr7 (272-314)||(39670843-39670885)
chr7 (328-386)||(40187446-40187504)
chr7 (273-314)||(1277998-1278039)
chr7 (265-314)||(2826227-2826276)
chr7 (341-386)||(3962301-3962346)
chr7 (280-313)||(10591885-10591918)
chr7 (192-314)||(23550758-23550888)
chr7 (233-273)||(2826278-2826318)
chr7 (338-386)||(6596233-6596281)
chr7 (274-314)||(13044208-13044248)
chr7 (338-386)||(14160551-14160599)
chr7 (270-314)||(19791724-19791768)
chr7 (233-273)||(34652082-34652122)
chr7 (206-278)||(42253942-42254013)
chr7 (274-314)||(42266987-42267027)
chr7 (242-298)||(42593117-42593173)
[»] chr1 (70 HSPs)
chr1 (334-463)||(31592323-31592448)
chr1 (191-314)||(28848779-28848901)
chr1 (233-314)||(51246554-51246634)
chr1 (206-306)||(30543351-30543450)
chr1 (191-314)||(52073438-52073560)
chr1 (204-314)||(50476520-50476629)
chr1 (233-314)||(15463830-15463911)
chr1 (205-314)||(17760465-17760573)
chr1 (332-440)||(3295284-3295392)
chr1 (205-314)||(34154318-34154426)
chr1 (233-314)||(43036303-43036384)
chr1 (235-314)||(938231-938307)
chr1 (233-314)||(33324644-33324724)
chr1 (233-314)||(34749995-34750076)
chr1 (241-314)||(50226058-50226131)
chr1 (205-310)||(52068131-52068235)
chr1 (239-314)||(35619494-35619569)
chr1 (233-309)||(40707189-40707267)
chr1 (231-314)||(39889638-39889731)
chr1 (204-273)||(41428025-41428092)
chr1 (233-314)||(47206404-47206494)
chr1 (272-313)||(36325774-36325815)
chr1 (256-313)||(50587077-50587134)
chr1 (233-314)||(23871443-23871534)
chr1 (205-310)||(36269726-36269840)
chr1 (262-314)||(38795020-38795072)
chr1 (233-314)||(47905669-47905760)
chr1 (271-314)||(896475-896518)
chr1 (191-314)||(5970421-5970543)
chr1 (233-288)||(17556677-17556732)
chr1 (271-314)||(32299160-32299203)
chr1 (199-298)||(35604262-35604360)
chr1 (271-314)||(42162033-42162076)
chr1 (233-314)||(43571945-43572023)
chr1 (272-314)||(20712196-20712238)
chr1 (268-314)||(36886924-36886970)
chr1 (268-314)||(39886904-39886950)
chr1 (187-273)||(41817330-41817415)
chr1 (273-314)||(13255404-13255445)
chr1 (273-314)||(42488607-42488648)
chr1 (266-314)||(33854819-33854867)
chr1 (266-314)||(33926055-33926103)
chr1 (271-314)||(2175392-2175435)
chr1 (271-314)||(2925915-2925958)
chr1 (271-314)||(8156317-8156360)
chr1 (271-314)||(14153169-14153212)
chr1 (271-314)||(17688397-17688440)
chr1 (271-314)||(26940651-26940694)
chr1 (271-314)||(27500042-27500085)
chr1 (239-314)||(28748216-28748291)
chr1 (191-273)||(33643601-33643683)
chr1 (192-271)||(34738286-34738364)
chr1 (255-314)||(48865453-48865512)
chr1 (280-314)||(7964041-7964075)
chr1 (268-314)||(38795386-38795432)
chr1 (268-314)||(39508825-39508871)
chr1 (238-314)||(45752217-45752290)
chr1 (273-314)||(6015491-6015532)
chr1 (341-382)||(15393510-15393551)
chr1 (198-259)||(27102869-27102929)
chr1 (205-310)||(27255192-27255296)
chr1 (265-314)||(30538729-30538778)
chr1 (233-278)||(33991551-33991596)
chr1 (257-314)||(48327319-48327376)
chr1 (205-273)||(5584488-5584555)
chr1 (233-273)||(12293820-12293860)
chr1 (282-314)||(13061377-13061409)
chr1 (270-314)||(41432742-41432786)
chr1 (282-314)||(42806239-42806271)
chr1 (338-386)||(48522251-48522299)
[»] chr2 (66 HSPs)
chr2 (328-463)||(16349455-16349586)
chr2 (191-312)||(5322111-5322231)
chr2 (234-314)||(14385101-14385181)
chr2 (233-314)||(13767439-13767519)
chr2 (235-298)||(15803200-15803263)
chr2 (234-314)||(31082826-31082906)
chr2 (205-314)||(1364816-1364924)
chr2 (231-314)||(31899336-31899416)
chr2 (210-314)||(6128834-6128936)
chr2 (191-314)||(15555335-15555458)
chr2 (238-298)||(39913270-39913330)
chr2 (265-314)||(28539406-28539455)
chr2 (233-314)||(30312395-30312476)
chr2 (169-270)||(36030760-36030860)
chr2 (205-314)||(43190529-43190637)
chr2 (238-314)||(41100095-41100171)
chr2 (242-313)||(16813653-16813724)
chr2 (242-313)||(16852932-16853003)
chr2 (192-314)||(1408845-1408966)
chr2 (487-561)||(18731578-18731652)
chr2 (199-308)||(25292157-25292264)
chr2 (265-314)||(35550138-35550187)
chr2 (205-314)||(38216497-38216606)
chr2 (238-314)||(7786470-7786546)
chr2 (242-298)||(33206815-33206871)
chr2 (195-266)||(4003401-4003471)
chr2 (271-314)||(4042022-4042065)
chr2 (271-314)||(13765919-13765962)
chr2 (328-371)||(18731826-18731869)
chr2 (271-314)||(25960590-25960633)
chr2 (271-314)||(36567258-36567301)
chr2 (233-314)||(3038927-3039017)
chr2 (233-312)||(10165425-10165512)
chr2 (272-314)||(16625784-16625826)
chr2 (268-314)||(34757661-34757707)
chr2 (268-314)||(39205072-39205118)
chr2 (271-313)||(43334865-43334907)
chr2 (273-314)||(3119832-3119873)
chr2 (205-311)||(6656101-6656208)
chr2 (233-314)||(8990943-8991034)
chr2 (233-314)||(18826206-18826297)
chr2 (262-314)||(21626174-21626226)
chr2 (205-273)||(30523230-30523296)
chr2 (233-311)||(31550245-31550320)
chr2 (236-314)||(1725923-1726010)
chr2 (271-314)||(8410910-8410953)
chr2 (271-314)||(14008309-14008352)
chr2 (271-314)||(18780442-18780485)
chr2 (271-314)||(38293946-38293989)
chr2 (271-314)||(44137193-44137236)
chr2 (272-314)||(11522160-11522202)
chr2 (195-273)||(26599280-26599357)
chr2 (273-314)||(1802045-1802086)
chr2 (273-314)||(8555756-8555797)
chr2 (187-276)||(11373787-11373875)
chr2 (205-278)||(11515027-11515099)
chr2 (361-434)||(18731731-18731804)
chr2 (268-308)||(567441-567481)
chr2 (266-298)||(1270698-1270730)
chr2 (242-314)||(3039271-3039342)
chr2 (240-302)||(8757386-8757445)
chr2 (338-386)||(11616718-11616766)
chr2 (328-388)||(23769769-23769829)
chr2 (238-278)||(31584792-31584832)
chr2 (233-273)||(32243485-32243525)
chr2 (266-314)||(35412201-35412249)
[»] chr6 (28 HSPs)
chr6 (238-314)||(26713878-26713954)
chr6 (191-314)||(32719366-32719488)
chr6 (191-314)||(13380509-13380632)
chr6 (233-314)||(33755059-33755140)
chr6 (234-314)||(20820520-20820600)
chr6 (271-314)||(1029351-1029394)
chr6 (271-314)||(24734938-24734981)
chr6 (265-314)||(5825384-5825433)
chr6 (265-310)||(32222054-32222099)
chr6 (239-308)||(34557158-34557227)
chr6 (266-314)||(12779566-12779614)
chr6 (265-309)||(15615719-15615763)
chr6 (233-314)||(26574375-26574466)
chr6 (271-314)||(4909895-4909938)
chr6 (283-314)||(13120402-13120433)
chr6 (271-314)||(23095108-23095151)
chr6 (271-314)||(26481111-26481154)
chr6 (271-314)||(34914685-34914728)
chr6 (196-278)||(463044-463125)
chr6 (280-314)||(19477323-19477357)
chr6 (268-314)||(25072511-25072557)
chr6 (280-314)||(26289618-26289652)
chr6 (268-314)||(33590309-33590355)
chr6 (239-296)||(4027026-4027083)
chr6 (239-292)||(6688048-6688101)
chr6 (233-314)||(20381846-20381926)
chr6 (265-314)||(31345351-31345400)
chr6 (338-386)||(32957525-32957573)
[»] chr3 (67 HSPs)
chr3 (192-308)||(1132921-1133036)
chr3 (238-314)||(34306623-34306699)
chr3 (204-314)||(24588273-24588382)
chr3 (205-314)||(38639572-38639680)
chr3 (241-314)||(49183713-49183786)
chr3 (238-314)||(2420685-2420760)
chr3 (333-420)||(27764279-27764364)
chr3 (231-314)||(39114944-39115025)
chr3 (247-314)||(47359343-47359410)
chr3 (196-278)||(15499325-15499406)
chr3 (205-314)||(25754092-25754200)
chr3 (233-314)||(52620815-52620896)
chr3 (205-314)||(53664589-53664697)
chr3 (191-314)||(44400678-44400800)
chr3 (182-278)||(32858791-32858885)
chr3 (191-278)||(48908900-48908986)
chr3 (204-274)||(11040858-11040927)
chr3 (238-314)||(48370169-48370246)
chr3 (233-297)||(50535108-50535173)
chr3 (336-463)||(7515009-7515129)
chr3 (205-273)||(21856036-21856103)
chr3 (238-314)||(35989131-35989207)
chr3 (233-314)||(41961957-41962048)
chr3 (262-310)||(46312404-46312452)
chr3 (262-314)||(47714653-47714705)
chr3 (262-314)||(54372556-54372608)
chr3 (191-274)||(21777666-21777748)
chr3 (271-314)||(27055884-27055927)
chr3 (271-314)||(39499256-39499299)
chr3 (233-310)||(40118881-40118955)
chr3 (271-314)||(47434300-47434343)
chr3 (271-314)||(47789426-47789469)
chr3 (204-314)||(32708717-32708826)
chr3 (240-298)||(33281712-33281770)
chr3 (272-314)||(33982719-33982761)
chr3 (233-314)||(24242072-24242163)
chr3 (274-314)||(43007502-43007542)
chr3 (195-271)||(45570976-45571051)
chr3 (271-314)||(25428726-25428769)
chr3 (191-278)||(33944666-33944752)
chr3 (271-314)||(38593010-38593053)
chr3 (240-311)||(42155947-42156017)
chr3 (243-278)||(42668071-42668106)
chr3 (271-314)||(43237348-43237391)
chr3 (271-314)||(49860894-49860937)
chr3 (280-314)||(16883412-16883446)
chr3 (229-314)||(23613149-23613235)
chr3 (272-314)||(29623295-29623337)
chr3 (242-310)||(42125545-42125610)
chr3 (271-309)||(45555691-45555729)
chr3 (280-314)||(46017272-46017306)
chr3 (232-278)||(49713640-49713686)
chr3 (268-314)||(51686561-51686607)
chr3 (273-314)||(30131866-30131907)
chr3 (233-278)||(36796433-36796478)
chr3 (233-273)||(3043149-3043189)
chr3 (205-265)||(3537191-3537250)
chr3 (205-273)||(5939812-5939879)
chr3 (262-314)||(7661085-7661137)
chr3 (271-311)||(30121505-30121545)
chr3 (214-266)||(33145377-33145428)
chr3 (262-314)||(37674133-37674185)
chr3 (271-311)||(38515295-38515335)
chr3 (231-299)||(41677462-41677530)
chr3 (266-306)||(47076899-47076939)
chr3 (338-386)||(51952023-51952071)
chr3 (234-278)||(53888498-53888542)
[»] scaffold0263 (1 HSPs)
scaffold0263 (247-314)||(12239-12306)
[»] scaffold0002 (1 HSPs)
scaffold0002 (247-314)||(90865-90932)
[»] scaffold0140 (1 HSPs)
scaffold0140 (205-314)||(19397-19506)
[»] scaffold0119 (2 HSPs)
scaffold0119 (266-314)||(37174-37222)
scaffold0119 (266-298)||(30507-30539)
[»] scaffold0028 (1 HSPs)
scaffold0028 (271-314)||(35435-35478)
[»] scaffold0279 (1 HSPs)
scaffold0279 (328-386)||(6800-6858)
[»] scaffold0016 (1 HSPs)
scaffold0016 (328-386)||(187213-187271)
[»] scaffold0248 (1 HSPs)
scaffold0248 (191-314)||(176-308)
[»] scaffold0063 (1 HSPs)
scaffold0063 (241-275)||(56565-56599)
[»] scaffold0717 (1 HSPs)
scaffold0717 (273-314)||(1638-1679)
[»] scaffold0519 (1 HSPs)
scaffold0519 (204-265)||(7497-7557)
[»] scaffold0450 (1 HSPs)
scaffold0450 (338-387)||(5377-5426)
[»] scaffold0031 (1 HSPs)
scaffold0031 (205-278)||(93532-93604)
[»] scaffold0026 (2 HSPs)
scaffold0026 (268-309)||(82731-82772)
scaffold0026 (209-273)||(74721-74784)
[»] scaffold0991 (1 HSPs)
scaffold0991 (210-314)||(3237-3340)
[»] scaffold0201 (1 HSPs)
scaffold0201 (338-382)||(20721-20765)
[»] scaffold0200 (1 HSPs)
scaffold0200 (328-388)||(26932-26992)


Alignment Details
Target: chr4 (Bit Score: 278; Significance: 1e-155; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 18 - 314
Target Start/End: Complemental strand, 48417887 - 48417590
Alignment:
Q  18 ctcatagctttaaggaaatttacctatgaaggggggatgcaatctgcctacttctctccttctggacgtagcattgcaatcacaaggtatgaagcactt- 116  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  48417887 ctcacagctttaaggaaatttacctatgaaggggggatgcaatctgcctacttctctccttctggacgtagcattgcaatcacaaggtatgaagcacttg 48417788  T
Q  117 atccattcttaatgtaactatttttcaatactttaagggcacaaggtattgaagaggactttgaggggaaaggactttgggggttcgtttttcttcataa 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48417787 atccattcttaatgtaactatttttcaatactttaagggcacaaggtattgaagaggactttgaggggaaaggactttgggggttcgtttttcttcataa 48417688  T
Q  217 tacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  48417687 tacaagaatcttcttaatttgggggaactcaaaaattgtattggaggaggattttggagggtctatatgaattcttcaaattcaatttatgttgttat 48417590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 49936498 - 49936603
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| |||| || ||||||||||||||| ||||||| |||||||||  ||||  | ||||| |||||||||||||||||||||||||    
T  49936498 ttttcttcataatacaa-aatcctcctaatttgggggaactaaaaaattgtattggagg--gatta-gaagggtttatatgaattcttcaaattcaatct 49936593  T
Q  305 atgttgttat 314  Q
    ||||||||||    
T  49936594 atgttgttat 49936603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 233 - 310
Target Start/End: Original strand, 23708156 - 23708233
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttg 310  Q
    ||||||||||||||||||||| |||||| |||||||| |||||||| |||||||||| ||||||| ||||||||||||    
T  23708156 atttgggggaactcaaaaattgtattgggggaggattatggagggtttatatgaatttttcaaatccaatctatgttg 23708233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 29114331 - 29114223
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| || | || | |||||| |||||| ||||||| |||||||||||| |||||||||||  ||| |||||||||||||| ||| |    
T  29114331 ttttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggagggttaataagaattcttcaaatttaattt 29114233  T
Q  305 atgttgttat 314  Q
    ||||||||||    
T  29114232 atgttgttat 29114223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 37756784 - 37756703
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| | |||||||||| ||| ||  ||| |||||||||| ||||||||||||||||||||||||    
T  37756784 atttgggggaactcaaaaattgtgttggaggagggtttcgggaggtttatatgaatttttcaaattcaatctatgttgttat 37756703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 45823538 - 45823646
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| | ||| || | ||||||| |||| ||||||| ||||| |||||| |||||||| || ||||||||||||||||||| ||| |    
T  45823538 ttttcttcataatacaaaactctcctca-tttggggaaacttaaaaattgtattgaaggagggttttggagagtttatatgaattcttcaaatttaattt 45823636  T
Q  305 atgttgttat 314  Q
    ||||||||||    
T  45823637 atgttgttat 45823646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 205 - 309
Target Start/End: Complemental strand, 51258827 - 51258724
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    |||||||||||||| || ||||||| |||||||| ||||||||||||||  |||||| || ||||||||||| | ||||  ||||||||||||||||| |    
T  51258827 ttttcttcataatataa-aatcttcgtaatttggaggaactcaaaaattgcattggatgaagattttggaggatttatacaaattcttcaaattcaattt 51258729  T
Q  305 atgtt 309  Q
    |||||    
T  51258728 atgtt 51258724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 211 - 314
Target Start/End: Complemental strand, 32948609 - 32948506
Alignment:
Q  211 tcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttg 310  Q
    |||||||| || ||||  ||| ||||| ||||||||||||||| ||||||  |||  || |||||||| |||||||||| ||||||||||||||||||||    
T  32948609 tcataataaaaaaatccccttcatttgagggaactcaaaaattgtattgggcgagagttatggagggtttatatgaatttttcaaattcaatctatgttg 32948510  T
Q  311 ttat 314  Q
    ||||    
T  32948509 ttat 32948506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 191 - 310
Target Start/End: Original strand, 55509856 - 55509974
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattc 290  Q
    |||||||||||   ||||||||||||||||| ||  || || |||||| |||||| |||||||  ||| |||| || ||||||||||| |||||||||||    
T  55509856 ctttgggggttaacttttcttcataatacaa-aacatttttcatttggaggaactaaaaaattgcatttgaggggggttttggagggtttatatgaattc 55509954  T
Q  291 ttcaaattcaatctatgttg 310  Q
    |||||||| |||||||||||    
T  55509955 ttcaaatttaatctatgttg 55509974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 374
Target Start/End: Complemental strand, 653831 - 653785
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagat 374  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  653831 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagat 653785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 204 - 314
Target Start/End: Original strand, 368051 - 368158
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatc 303  Q
    |||||||||||||||||| || | || | |||||||||| ||||||| |||||||| |||||| |||||| || || |||||||||||||||||| |||     
T  368051 tttttcttcataatacaa-aaccctcctcatttgggggagctcaaaa-ttatattgaaggagggttttgggggttc-atatgaattcttcaaatttaatt 368147  T
Q  304 tatgttgttat 314  Q
    |||||||||||    
T  368148 tatgttgttat 368158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 3127082 - 3126992
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggatttt---------ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||||||||| ||||         ||||||| |||||||||| ||||||||||||||||||||||||    
T  3127082 atttgggggaactcaaaaattgtattggaggagggttttcggggttaaggagggtttatatgaatttttcaaattcaatctatgttgttat 3126992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 189 - 306
Target Start/End: Complemental strand, 34236629 - 34236513
Alignment:
Q  189 gactttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaat 288  Q
    |||||||| ||||| |||||||||||| ||||| | ||| ||| |||| || ||  ||| ||||||||||| |||||||||||||| ||| || ||||||    
T  34236629 gactttggaggttcatttttcttcatagtacaaaattct-cttcatttaggagagttcacaaattatattgaaggaggattttggatggtttacatgaat 34236531  T
Q  289 tcttcaaattcaatctat 306  Q
    | |||||||| |||||||    
T  34236530 ttttcaaatttaatctat 34236513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 47063707 - 47063783
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||||||| ||||||| ||||||||  |||||| ||| ||||||||||||||| ||| |||||||||||    
T  47063707 ggggaactaaaaaattgtattggaagaggatttgagagggtttatgtgaattcttcaaatttaatatatgttgttat 47063783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 46177035 - 46176925
Alignment:
Q  195 gggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttca 294  Q
    |||||||  |||||||| ||||||||| || | || | |||||| |||||| |||| || |||||||||||| |||||| |||| |||||||||| ||||    
T  46177035 gggggttaatttttcttaataatacaa-aaccctcctcatttggaggaactaaaaagttgtattggaggagggttttggggggtttatatgaatttttca 46176937  T
Q  295 aattcaatctat 306  Q
    |||| |||||||    
T  46176936 aatttaatctat 46176925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 49668169 - 49668094
Alignment:
Q  239 gggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| ||||||| |||||||||||| |||||| |||| || ||||||| || ||||| |||||||||||||||    
T  49668169 gggaactaaaaaattgtattggaggagggttttggggggtttacatgaattttttaaatttaatctatgttgttat 49668094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 278
Target Start/End: Original strand, 54205812 - 54205894
Alignment:
Q  195 gggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    |||||||| ||||||||||||| |||| |||| || | ||||||||||||||||||||| ||| |||||| |||||| ||||||    
T  54205812 gggggttcatttttcttcataaaacaa-aatcctcctcatttgggggaactcaaaaattgtataggaggacgatttttgagggt 54205894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 17622542 - 17622456
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg---------agggtctatatgaattcttcaaattcaatctatgttg 310  Q
    ||||||||||||||||||||| |||||| ||||| ||||||         |||||||||||||||| ||||||||||||||||||||    
T  17622542 atttgggggaactcaaaaattgtattgggggagggttttgggggttatggagggtctatatgaatttttcaaattcaatctatgttg 17622456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 204 - 298
Target Start/End: Original strand, 35959178 - 35959271
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaatt 298  Q
    |||||||||||||||||| || | || | ||||||||||||| |||| || |||||||||||  |||||| |||| ||||| |||||||||||||    
T  35959178 tttttcttcataatacaa-aaccctcctcatttgggggaactaaaaagttgtattggaggagcgttttggggggtttatataaattcttcaaatt 35959271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 36151445 - 36151396
Alignment:
Q  229 cttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    ||||||||||||||||||||||||| |||||| |||||||||||| ||||    
T  36151445 cttaatttgggggaactcaaaaattgtattgggggaggattttggggggt 36151396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 46176494 - 46176566
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    ||||||||||||||||| ||||  |||||||||| |||||  ||||||| ||||||||||||| ||||||||||    
T  46176494 ttttcttcataatacaa-aatccccttaatttggaggaacgaaaaaattgtattggaggaggagtttggagggt 46176566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 236 - 314
Target Start/End: Original strand, 48620310 - 48620390
Alignment:
Q  236 tgggggaactcaaaaattatattggaggaggattttggagggtc--tatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||| ||||||| |||||||||||| |||||| |||    ||||||||||||||||||| ||| |||||||||||    
T  48620310 tgggggaactaaaaaattgtattggaggagggttttgggggggggttatatgaattcttcaaatttaatatatgttgttat 48620390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 51974311 - 51974418
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| |||| |||| |||||||| |||| | ||||| ||||| ||||||||||| || ||  ||  ||||||| ||||||| |||||    
T  51974311 ttttcttcataatacaa-aatcctcttcatttgggg-aactaacaaattgtattgaaggaggatttttgaagggttacgtgaattcatcaaatttaatct 51974408  T
Q  305 atgttgttat 314  Q
    ||||||||||    
T  51974409 atgttgttat 51974418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 7182262 - 7182171
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg----------agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||| ||||| ||||||          ||||| |||||||||| ||||||||||||||||||||||||    
T  7182262 atttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgttat 7182171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 9020959 - 9021035
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||||| ||||||| |||| ||||||| ||| |  |||||||||||||||| |||||| || |||||    
T  9020959 ggggaactcaaaaattgtattggatgagggttttggaaggtttgcatgaattcttcaaatttaatctaggtagttat 9021035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 314
Target Start/End: Original strand, 28880020 - 28880092
Alignment:
Q  242 aactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||| ||| ||| ||||| | |||||||||||||| | ||||||||||||||||||| ||| |||||||||||    
T  28880020 aactaaaatattgtattgaatgaggattttggaggatttatatgaattcttcaaatttaatatatgttgttat 28880092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 47669859 - 47669911
Alignment:
Q  262 ggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| || |||||||| |||||||||| ||||||||||||||||||||||||    
T  47669859 ggagggttatggagggtttatatgaatttttcaaattcaatctatgttgttat 47669911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 8828262 - 8828190
Alignment:
Q  240 ggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| |||||||||| ||||||||||||| ||  ||| ||||||||||||| ||||| ||||| |||||||||    
T  8828262 ggaactgaaaaattataatggaggaggatttggg--ggtttatatgaattctttaaatttaatctttgttgttat 8828190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 13270298 - 13270255
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  13270298 tggagggtttatatgaatttttcaaattcaatctatgttgttat 13270255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 337 - 400
Target Start/End: Complemental strand, 28031640 - 28031577
Alignment:
Q  337 aaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaattcaaatgaaaatac 400  Q
    |||||||||| ||||| ||||||||||| ||||||||| ||||||| ||||  |||||||||||    
T  28031640 aaaacttaatacattttatttaaaataaaagtagagatacaagatgaaatttgaatgaaaatac 28031577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 32060704 - 32060747
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  32060704 tggagggtttatatgaatttttcaaattcaatctatgttgttat 32060747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 12274325 - 12274267
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    |||||||| |||||||| ||||||||||| | ||||| ||||||||| |||||||||||    
T  12274325 ttacaagaaaaaacttattgcatttcattcataataatagtagagatacaagatggaat 12274267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 228 - 314
Target Start/End: Original strand, 31428816 - 31428902
Alignment:
Q  228 tcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||| ||||||||||| | ||||||| ||||||| || | ||||||||| | || ||||||||||  |||| |||||||||||||||    
T  31428816 tcttcatttgggggaattaaaaaattgtattggaagatggttttggaggatttacatgaattcttttaatttaatctatgttgttat 31428902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 24683057 - 24682976
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| ||| |||||||||| |||| ||||||| |||| |||||| |  |||||||||||||||| |||||| || |||||    
T  24683057 atttggaggagctcaaaaattgtatttgaggagggttttagagggtttgcatgaattcttcaaatttaatctaggtagttat 24682976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 483 - 561
Target Start/End: Complemental strand, 28031466 - 28031386
Alignment:
Q  483 cgctaacaatcattaataattgacacaaaatctgagacga--caagtgtacaaccatagatattgtctaccaccacctttg 561  Q
    |||||||||| ||||||||||||| |||||||  ||||    | ||||||| |||||||||||||||||||| ||||||||    
T  28031466 cgctaacaattattaataattgacgcaaaatccaagacatatcgagtgtacgaccatagatattgtctaccaacacctttg 28031386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 234 - 314
Target Start/End: Complemental strand, 9836831 - 9836752
Alignment:
Q  234 tttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| ||| ||||||||| | |||| ||||| |||| |||||| ||||||||||||||||| | ||||||||| |||||    
T  9836831 tttgggagaattcaaaaattgttttgg-ggagggttttagagggtttatatgaattcttcaaagttaatctatgtagttat 9836752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 20533937 - 20534028
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg----------agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||| ||||| ||||||          ||||| |||||||||| ||||||| ||||||||||||||||    
T  20533937 atttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaatccaatctatgttgttat 20534028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 386
Target Start/End: Original strand, 26429196 - 26429244
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||| ||||||||||| ||||||| ||||||||| |||||||||||    
T  26429196 aaacttattgcatttcattcaaaataatagtagagatacaagatggaat 26429244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 49404643 - 49404603
Alignment:
Q  274 agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  49404643 agggtttatatgaatttttcaaattcaatctatgttgttat 49404603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 275 - 314
Target Start/End: Original strand, 13270015 - 13270054
Alignment:
Q  275 gggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||| |||||||||| ||||||||||||||||||||||||    
T  13270015 gggtttatatgaatttttcaaattcaatctatgttgttat 13270054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 13985028 - 13984953
Alignment:
Q  240 ggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaat-ctatgttgttat 314  Q
    |||||| ||||||| |||||||||||| ||||||||| | ||||||| |||||| |||| |||  |||||||||||    
T  13985028 ggaactaaaaaattgtattggaggagggttttggaggatttatatgagttcttctaatttaatattatgttgttat 13984953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 16535749 - 16535792
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| |||||||| |||||||||||||||    
T  16535749 tggagggtttatatgaatttttcaaatttaatctatgttgttat 16535792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 21730350 - 21730307
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||||||||||||| |||| ||||||||||||||||    
T  21730350 tggagggtttatatgaattctttaaatccaatctatgttgttat 21730307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 24279972 - 24280015
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| |||||||| |||||||||||||||    
T  24279972 tggagggtttatatgaatttttcaaatttaatctatgttgttat 24280015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 271
Target Start/End: Original strand, 25843826 - 25843892
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggatttt 271  Q
    |||||| ||||||||||| | |||||| | ||||||| |||||||||| | |||||||||||||||||    
T  25843826 tttttcatcataatacaaaactcttctca-tttggggaaactcaaaaagtgtattggaggaggatttt 25843892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 299
Target Start/End: Complemental strand, 27938884 - 27938790
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattc 299  Q
    ||||||||||||||||| |||||| | | | ||||||||||| | ||| | |||||||||||||||||||| |   || || ||||||||||||||    
T  27938884 tttttcttcataataca-gaatctccctcaattgggggaactaacaaaatgtattggaggaggattttggaagtgttagataaattcttcaaattc 27938790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 38317251 - 38317208
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||| ||||||||||||||||    
T  38317251 tggagggtttatatgaatttttcaaatccaatctatgttgttat 38317208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 41363835 - 41363792
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||  |||||||||| ||||||||||||||||||||||||    
T  41363835 tggagggattatatgaatttttcaaattcaatctatgttgttat 41363792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 197 - 272
Target Start/End: Complemental strand, 44590323 - 44590248
Alignment:
Q  197 gggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttg 272  Q
    |||||| |||||||||||||||||| |||| |  |||||||| | || ||||||||| |||| ||| |||||||||    
T  44590323 gggttcatttttcttcataatacaaaaatcattataatttggagaaattcaaaaattgtattcgagaaggattttg 44590248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 54806485 - 54806571
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtc----------tatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||||| ||||| |||||| ||||           |||||||||| ||||||||||||||||||||||||    
T  54806485 ggggaactcaaaaattatattgggggagggttttggggggttacagaggatttatatgaatttttcaaattcaatctatgttgttat 54806571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 311
Target Start/End: Complemental strand, 56504491 - 56504452
Alignment:
Q  272 ggagggtctatatgaattcttcaaattcaatctatgttgt 311  Q
    ||||||| |||||||||| |||||||||||||||||||||    
T  56504491 ggagggtttatatgaatttttcaaattcaatctatgttgt 56504452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 8827846 - 8827800
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||| |||||| ||||| ||||||||||||| |||||||||||||||    
T  8827846 ttttagagggtttatatcaattcttcaaatttaatctatgttgttat 8827800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 213 - 314
Target Start/End: Complemental strand, 17115217 - 17115116
Alignment:
Q  213 ataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggagga-ttttggagggtctatatgaattcttcaaattcaatctatgttgt 311  Q
    ||||||||| | |||| ||||||||  |||||||||||||||||||| |||| || ||||||| ||| || ||||||||| | |||| |||||| || ||    
T  17115217 ataatacaaaattctt-ttaatttgaaggaactcaaaaattatattgaaggaagatttttggaaggtttacatgaattctcctaatttaatctacgtagt 17115119  T
Q  312 tat 314  Q
    |||    
T  17115118 tat 17115116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 26006079 - 26006137
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||||  ||||||| ||||||||||| | ||||| ||||||||| |||||||||||    
T  26006079 ttacaagaagaaacttattgcatttcattcataataatagtagagatacaagatggaat 26006137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 189 - 251
Target Start/End: Complemental strand, 27485356 - 27485295
Alignment:
Q  189 gactttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaa 251  Q
    |||||||||||||| |||||||||||||||||| |||| || | ||||| |||||||| ||||    
T  27485356 gactttgggggttcatttttcttcataatacaa-aatcctcctcatttgagggaactcgaaaa 27485295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 280 - 314
Target Start/End: Complemental strand, 28710430 - 28710396
Alignment:
Q  280 tatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||||| |||||||||||    
T  28710430 tatatgaattcttcaaattcaatttatgttgttat 28710396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 280 - 314
Target Start/End: Complemental strand, 40423087 - 40423053
Alignment:
Q  280 tatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||| |||||||||||||||    
T  40423087 tatatgaattcttcaaatttaatctatgttgttat 40423053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 280 - 314
Target Start/End: Complemental strand, 45022554 - 45022520
Alignment:
Q  280 tatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||||||||||    
T  45022554 tatatgaattcttcaaattcagtctatgttgttat 45022520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 271
Target Start/End: Original strand, 45971570 - 45971608
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggatttt 271  Q
    ||||||||||||| ||||||| |||||||||||||||||    
T  45971570 atttgggggaactaaaaaattgtattggaggaggatttt 45971608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 242 - 314
Target Start/End: Original strand, 6836424 - 6836501
Alignment:
Q  242 aactcaaaaattatattggaggaggatttt-----ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||| ||||||||||| ||||     ||||||| |||||||||| ||||| || ||||||| |||||||    
T  6836424 aactcaaaaattaaattggaggagggttttgtttaggagggtttatatgaatttttcaagtttaatctatcttgttat 6836501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 313
Target Start/End: Complemental strand, 9046429 - 9046396
Alignment:
Q  280 tatatgaattcttcaaattcaatctatgttgtta 313  Q
    ||||||||||||||||||||||| ||||||||||    
T  9046429 tatatgaattcttcaaattcaatatatgttgtta 9046396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 12708932 - 12708860
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    ||||||||||||||||| || | || | |||||| |||||| ||||||| |||||||||||| |||||| ||||    
T  12708932 ttttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggt 12708860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 31530029 - 31530074
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    ||||||||||||||||||||| |||||| ||||| |||||| ||||    
T  31530029 atttgggggaactcaaaaattgtattgggggagggttttggggggt 31530074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 310
Target Start/End: Original strand, 38366087 - 38366124
Alignment:
Q  273 gagggtctatatgaattcttcaaattcaatctatgttg 310  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  38366087 gagggtttatatgaatttttcaaattcaatctatgttg 38366124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 386
Target Start/End: Complemental strand, 9035020 - 9034972
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||| ||||||||||| | ||||| ||||||||| |||||||||||    
T  9035020 aaacttattgcatttcattcataataatagtagagatacaagatggaat 9034972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 386
Target Start/End: Original strand, 22359245 - 22359293
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||| ||||||||||| | ||||| ||||||||| |||||||||||    
T  22359245 aaacttattgcatttcattcataataatagtagagatacaagatggaat 22359293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 386
Target Start/End: Complemental strand, 35853294 - 35853246
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||| ||||||| ||| ||||||| ||||||||| |||||||||||    
T  35853294 aaacttattgcatttaattcaaaataatagtagagatacaagatggaat 35853246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 38317300 - 38317260
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    ||||||||||||||||||||| |||||| ||||| ||||||    
T  38317300 atttgggggaactcaaaaattgtattgggggagggttttgg 38317260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 234 - 274
Target Start/End: Original strand, 42649494 - 42649534
Alignment:
Q  234 tttgggggaactcaaaaattatattggaggaggattttgga 274  Q
    |||||||||||||||||| | | ||||||||||||||||||    
T  42649494 tttgggggaactcaaaaaatgtgttggaggaggattttgga 42649534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 42650646 - 42650686
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    ||||||||||||| ||||||| |||||||||||| ||||||    
T  42650646 atttgggggaactaaaaaattgtattggaggagggttttgg 42650686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 302
Target Start/End: Complemental strand, 54240745 - 54240681
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaat 302  Q
    ||||||| || ||| ||| ||||||||| |||||| ||||| ||||  |||||||||||||||||    
T  54240745 ggggaacacataaactatcttggaggagaattttgaagggtttatagaaattcttcaaattcaat 54240681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 159; Significance: 2e-84; HSPs: 67)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 159; E-Value: 2e-84
Query Start/End: Original strand, 328 - 561
Target Start/End: Original strand, 26006771 - 26007021
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaattcaaatgaaaatacataaatcggcatgacatgaatctacca 427  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||    
T  26006771 ttacaaaagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaattcaaatgaaaatacataaatcggcatgacatggagctacca 26006870  T
Q  428 tagctaaactatatatgagcaacttcattgacttgttaaattagaag-----------------atgatagacgctaacaatcattaataattgacacaa 510  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||                 |||||||||||||||||||||||||||||||||||     
T  26006871 tagctaaactatatatgagtaacttcattaacttgttaaattagaagctaatataagattattaatgatagacgctaacaatcattaataattgacacag 26006970  T
Q  511 aatctgagacgacaagtgtacaaccatagatattgtctaccaccacctttg 561  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||| ||||    
T  26006971 aatctgagacggcaagtgtacgaccatagatattgtctaccaccacatttg 26007021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 233 - 312
Target Start/End: Complemental strand, 79684 - 79605
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgtt 312  Q
    ||||||||||||| ||||||| |||||||||||| ||||||| ||| |||||||| |||||||||| |||||||||||||    
T  79684 atttgggggaactaaaaaattgtattggaggagggttttggacggtttatatgaactcttcaaatttaatctatgttgtt 79605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 41866188 - 41866107
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||| ||||||| |||||||||||| ||||| ||||| ||||| ||||||||||||| |||||||||||||||    
T  41866188 atttggggaaactaaaaaattgtattggaggagggttttgaagggtttatataaattcttcaaatttaatctatgttgttat 41866107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 206 - 298
Target Start/End: Complemental strand, 10605244 - 10605153
Alignment:
Q  206 tttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaatt 298  Q
    |||||||||||||||| |||||||||||||||| |||||||||| ||| ||||||| |||| |||| ||| || ||||||||||||| |||||    
T  10605244 tttcttcataatacaa-aatcttcttaatttggaggaactcaaatattgtattggatgagggttttcgagagtttatatgaattctttaaatt 10605153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 34148632 - 34148559
Alignment:
Q  239 gggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||||||||||||||||| |||||| |||| |||||||||| ||||||||||||||||||| ||||    
T  34148632 gggaactcaaaaattatattggaggaggtttttgg-gggt-tatatgaatttttcaaattcaatctatgtttttat 34148559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 195 - 309
Target Start/End: Original strand, 13258472 - 13258582
Alignment:
Q  195 gggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttca 294  Q
    |||||||  |||||||||||||||||| |    || ||||| ||||||||| ||||||| || | || ||||| |||||||||| |||||||||||||||    
T  13258472 gggggttaatttttcttcataatacaaaa----tcctaattcgggggaactaaaaaattgtaatcgaagaggactttggagggtttatatgaattcttca 13258567  T
Q  295 aattcaatctatgtt 309  Q
    ||| |||||||||||    
T  13258568 aatccaatctatgtt 13258582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 328 - 399
Target Start/End: Original strand, 40175142 - 40175213
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaattcaaatgaaaata 399  Q
    |||||||||||| | ||||||| |||||||||| ||||||||||| | || |||||||||||||||||||||    
T  40175142 ttacaagagaaagcctaatgcaattcatttaaagtaagagtagaggtacatgatggaattcaaatgaaaata 40175213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 247 - 313
Target Start/End: Complemental strand, 6943513 - 6943447
Alignment:
Q  247 aaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgtta 313  Q
    ||||||| |||||||||||| |||||||||||  |||||||||||||||||| ||| ||||||||||    
T  6943513 aaaaattgtattggaggagggttttggagggttaatatgaattcttcaaatttaatttatgttgtta 6943447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 36837552 - 36837478
Alignment:
Q  240 ggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| ||||||| |||||||||||| |||||||||||  ||| |||||||||||||| ||| |||||||||||    
T  36837552 ggaactaaaaaattgtattggaggagggttttggagggttaataagaattcttcaaatttaatttatgttgttat 36837478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 332 - 397
Target Start/End: Complemental strand, 12051526 - 12051461
Alignment:
Q  332 aagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaattcaaatgaaaa 397  Q
    |||||||||| |||||||||||||||||||||||||||| ||| || ||| ||| |||||||||||    
T  12051526 aagagaaaacataatgcatttcatttaaaataagagtagtgatacatgatagaactcaaatgaaaa 12051461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 26772740 - 26772632
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| || | || | |||||  |||||| ||||||| ||||||| |||| |||||||||||  ||| |||||||||||||| ||| |    
T  26772740 ttttcttcataatacaa-aaccctcatcatttgaaggaactaaaaaattgtattggatgagggttttggagggttaataagaattcttcaaatttaattt 26772642  T
Q  305 atgttgttat 314  Q
    ||||||||||    
T  26772641 atgttgttat 26772632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 337 - 406
Target Start/End: Complemental strand, 43234267 - 43234198
Alignment:
Q  337 aaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaattcaaatgaaaatacataaat 406  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| ||||  ||||||| |||| ||||    
T  43234267 aaaacttaatgcatttgatttaaaataagagtagagatacaagatgaaatttgaatgaaattacagaaat 43234198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 332 - 400
Target Start/End: Complemental strand, 12030408 - 12030340
Alignment:
Q  332 aagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaattcaaatgaaaatac 400  Q
    ||||||||||||||||||| ||||||||||||||||||| ||| || |||  || ||||||||||||||    
T  12030408 aagagaaaacttaatgcatgtcatttaaaataagagtagtgatacatgatacaactcaaatgaaaatac 12030340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 240 - 314
Target Start/End: Original strand, 16424164 - 16424239
Alignment:
Q  240 ggaactcaaaaattatattggaggaggattttg-gagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| ||||||| |||| ||||||||||||| |||||| ||||||||||||||||||| ||| ||||| |||||    
T  16424164 ggaactaaaaaattgtattagaggaggattttgagagggtttatatgaattcttcaaatttaatatatgtagttat 16424239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 195 - 314
Target Start/End: Original strand, 31149886 - 31150003
Alignment:
Q  195 gggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttca 294  Q
    |||||||  ||||||||| |||||||| |||| || | |||||||| |||| |||| || ||| | |||||  ||||||||||| |||||||||||||||    
T  31149886 gggggttaatttttcttcctaatacaa-aatcatcctcatttgggg-aactaaaaagttgtatcgcaggagcgttttggagggtttatatgaattcttca 31149983  T
Q  295 aattcaatctatgttgttat 314  Q
    |||| | |||||||||||||    
T  31149984 aatttattctatgttgttat 31150003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 28169859 - 28169924
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattt 270  Q
    |||||||||||||||||| |  ||||| |||||||||||||||||||| | ||||||||||||||||    
T  28169859 tttttcttcataatacaaaatccttct-aatttgggggaactcaaaaaatgtattggaggaggattt 28169924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 228 - 298
Target Start/End: Complemental strand, 31305850 - 31305781
Alignment:
Q  228 tcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaatt 298  Q
    ||||||||||||| |||  || |||| |||||||| ||||||||||||||| |||||||||||||||||||    
T  31305850 tcttaatttgggg-aacgaaacaattgtattggagaaggattttggagggtttatatgaattcttcaaatt 31305781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 34336050 - 34336131
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| ||||||| |||||||  ||||||||||  |||||  |||| ||||||||||||||||||| ||||||| |||||||    
T  34336050 atttgagggaactaaaaaattgcattggaggagtgttttgaggggtttatatgaattcttcaaatttaatctattttgttat 34336131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 195 - 306
Target Start/End: Complemental strand, 35376736 - 35376625
Alignment:
Q  195 gggggttcgtttttcttcataatacaagaatcttcttaatttgggggaact-caaaaattatattggaggaggattttggagggtctatatgaattcttc 293  Q
    |||||||| ||||||||||| |||||| ||||||| | |||||||||||||  ||||||| |||| |||||   ||||||| ||| | |||||| |||||    
T  35376736 gggggttcatttttcttcatgatacaa-aatcttcctcatttgggggaactgaaaaaattgtattagaggatagttttggaaggtttgtatgaaatcttc 35376638  T
Q  294 aaattcaatctat 306  Q
    ||||| |||||||    
T  35376637 aaattaaatctat 35376625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 40985173 - 40985106
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttg 272  Q
    ||||| |||||||||||| |||| || | ||||||||||||||||||||| |||||||||||| |||||    
T  40985173 tttttattcataatacaa-aatcctcctcatttgggggaactcaaaaattgtattggaggagggttttg 40985106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 1942076 - 1942033
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  1942076 tggagggtttatatgaatttttcaaattcaatctatgttgttat 1942033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 2474790 - 2474747
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  2474790 tggagggtttatatgaatttttcaaattcaatctatgttgttat 2474747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 4734519 - 4734476
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  4734519 tggagggtttatatgaatttttcaaattcaatctatgttgttat 4734476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 196 - 259
Target Start/End: Complemental strand, 16024660 - 16024598
Alignment:
Q  196 ggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattg 259  Q
    |||||||||||||||||||||||||| |||| |  ||||||| ||||||||||||||| |||||    
T  16024660 ggggttcgtttttcttcataatacaa-aatcctactaatttgtgggaactcaaaaattgtattg 16024598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 21173970 - 21173884
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    |||||||||||   ||||||||||||||||| || | || | |||||| |||||| |||||||||||||||||||| |||||| ||||    
T  21173970 ctttgggggttaacttttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattatattggaggagggttttggggggt 21173884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 23932670 - 23932584
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    |||||||||||   ||||||||||||||||| || | || | |||||| |||||| ||||||| ||||||||||||||||||| ||||    
T  23932670 ctttgggggttaacttttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattgtattggaggaggattttggggggt 23932584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 34272573 - 34272616
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  34272573 tggagggtttatatgaatttttcaaattcaatctatgttgttat 34272616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 247 - 298
Target Start/End: Original strand, 39778838 - 39778889
Alignment:
Q  247 aaaaattatattggaggaggattttggagggtctatatgaattcttcaaatt 298  Q
    ||||||| ||||||||||| |||||||| ||| |||||||||||||||||||    
T  39778838 aaaaattgtattggaggagaattttggatggtttatatgaattcttcaaatt 39778889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 298
Target Start/End: Original strand, 39405052 - 39405144
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaatt 298  Q
    |||||||||| ||||||| | ||| |||| ||||  |||||||||||||||||||||| || ||||||| ||| | |||||||||| ||||||||    
T  39405052 tttttcttcacaatacaaaattctcctta-tttgaaggaactcaaaaattatattggaaga-gattttgaaggatttatatgaatttttcaaatt 39405144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 300
Target Start/End: Original strand, 45308298 - 45308360
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattca 300  Q
    |||||||| |||||||| |||||||||| ||||| || ||| |||||||||||||||| ||||    
T  45308298 ggggaacttaaaaattacattggaggagaattttagaaggtttatatgaattcttcaatttca 45308360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 3404595 - 3404554
Alignment:
Q  273 gagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| |||||||||| ||||||||||||||||||||||||    
T  3404595 gagggtttatatgaatttttcaaattcaatctatgttgttat 3404554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 561
Target Start/End: Complemental strand, 12030293 - 12030220
Alignment:
Q  488 acaatcattaataattgacacaaaatctgagacgacaagtgtacaaccatagatattgtctaccaccacctttg 561  Q
    |||||||||||||||||||  ||||| |||||   |||||| |||||||||||||  ||| |||||||||||||    
T  12030293 acaatcattaataattgacgtaaaatttgagaaaccaagtgaacaaccatagatacagtcaaccaccacctttg 12030220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 488 - 561
Target Start/End: Complemental strand, 12051410 - 12051337
Alignment:
Q  488 acaatcattaataattgacacaaaatctgagacgacaagtgtacaaccatagatattgtctaccaccacctttg 561  Q
    |||||||||||||||||||  |||||||||||   |||||| |||||||||||||  ||| ||||| |||||||    
T  12051410 acaatcattaataattgacgtaaaatctgagaaaccaagtgaacaaccatagatacagtcaaccactacctttg 12051337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 210 - 267
Target Start/End: Original strand, 24340015 - 24340071
Alignment:
Q  210 ttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggagga 267  Q
    |||||||||||| |||||| ||||||||| |||||| ||||||||||||||| |||||    
T  24340015 ttcataatacaa-aatctttttaatttggaggaactaaaaaattatattggatgagga 24340071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 310
Target Start/End: Original strand, 43239721 - 43239766
Alignment:
Q  265 ggattttggagggtctatatgaattcttcaaattcaatctatgttg 310  Q
    |||||||| ||||| ||||||||||||||||||| |||||||||||    
T  43239721 ggattttgaagggtttatatgaattcttcaaatttaatctatgttg 43239766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 1839891 - 1839800
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg----------agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||| ||||||| |||||||||||| ||||||          ||||| ||||||||||||||||||| ||| |||||||||||    
T  1839891 atttgggggaacttaaaaattgtattggaggagggttttggggggtttaagagggtttatatgaattcttcaaatttaatatatgttgttat 1839800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 386
Target Start/End: Original strand, 11503073 - 11503121
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||| ||||||||||| ||||||| ||||||||| |||||||||||    
T  11503073 aaacttattgcatttcattcaaaataatagtagagatacaagatggaat 11503121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 386
Target Start/End: Complemental strand, 32578186 - 32578138
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||| ||||||||||| ||||||| ||||||||| |||||||||||    
T  32578186 aaacttattgcatttcattcaaaataatagtagagatacaagatggaat 32578138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 271
Target Start/End: Complemental strand, 11229322 - 11229256
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggatttt 271  Q
    |||||||||||||||||| ||||||| | |||||| |||||| ||||||| ||||| ||||| |||||    
T  11229322 tttttcttcataatacaa-aatcttcgtcatttggaggaactaaaaaattgtattgaaggagaatttt 11229256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 248 - 314
Target Start/End: Complemental strand, 15108311 - 15108244
Alignment:
Q  248 aaaattatattggaggaggatttt-ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||| | ||||||| |||| ||||||  |||||||||| |||||||| |||||||||||||||    
T  15108311 aaaattatactagaggagggtttttggagggattatatgaatttttcaaattaaatctatgttgttat 15108244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 31297371 - 31297328
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||    
T  31297371 tggagggtttatatgaatttttcaaattcaatctatgttattat 31297328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 36102913 - 36102870
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||| |||||| ||||||||||||||||||||||||    
T  36102913 tggagggtttatttgaatttttcaaattcaatctatgttgttat 36102870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 40999221 - 40999162
Alignment:
Q  255 tattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| |||| ||||||||| || |||||||||| ||||||||  ||||||||||||||    
T  40999221 tattgggggagcattttggagagtttatatgaatttttcaaattatatctatgttgttat 40999162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Complemental strand, 44251607 - 44251548
Alignment:
Q  255 tattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||| ||||||||||||| ||||| |||| ||||| || ||||| |||||||||||||||    
T  44251607 tatttgaggaggattttgaagggtttatacgaattttttaaatttaatctatgttgttat 44251548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 308
Target Start/End: Original strand, 12595370 - 12595408
Alignment:
Q  270 ttggagggtctatatgaattcttcaaattcaatctatgt 308  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  12595370 ttggagggtttatatgaattcttcaaatttaatctatgt 12595408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 25663650 - 25663592
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||||  ||||||| ||||||||||| ||||||| || |||||| |||||||||||    
T  25663650 ttacaagaagaaacttattgcatttcattcaaaataataggagagatacaagatggaat 25663592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 27085407 - 27085449
Alignment:
Q  272 ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||    
T  27085407 ggagggtttatatgaattcttcaaatttaatatatgttgttat 27085449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 29584233 - 29584275
Alignment:
Q  272 ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| ||||||||||||||||| | |||||||||||||||    
T  29584233 ggagggtttatatgaattcttcaaaattaatctatgttgttat 29584275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 39193986 - 39194032
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| ||||| ||||||||||||||||||| | |||||||||||||    
T  39193986 ttttgaagggtttatatgaattcttcaaatttattctatgttgttat 39194032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 43007757 - 43007799
Alignment:
Q  272 ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| |||||||||| |||||||| |||||||||||||||    
T  43007757 ggagggtttatatgaatttttcaaatttaatctatgttgttat 43007799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 43733146 - 43733100
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||| | |||||||||| || |||||||||||||||||||||    
T  43733146 ttttggaggatttatatgaatttttaaaattcaatctatgttgttat 43733100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 314
Target Start/End: Complemental strand, 12506221 - 12506176
Alignment:
Q  269 tttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||| ||||||||||||||||||| ||| ||| |||||||    
T  12506221 tttggagggtttatatgaattcttcaaatttaatatatattgttat 12506176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 14581819 - 14581738
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||  | ||||| | |||||||| ||| |||| |||||| |||| ||||||||||| || |||||||||| ||||    
T  14581819 atttgggggagttaaaaaactgtattggagtagggtttttgagggtttataagaattcttcaattttaatctatgttattat 14581738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 269 - 314
Target Start/End: Original strand, 23963031 - 23963076
Alignment:
Q  269 tttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||| ||||||||| ||||||||| ||| |||||||||||    
T  23963031 tttggagggtttatatgaatccttcaaatttaatatatgttgttat 23963076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 25033390 - 25033435
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    ||||||||||||||||||||| |||||| ||||| |||||| ||||    
T  25033390 atttgggggaactcaaaaattgtattgggggagggttttggggggt 25033435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 314
Target Start/End: Complemental strand, 28416277 - 28416151
Alignment:
Q  186 aaggactttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatg 285  Q
    |||||||||||||| |  |||||||||| |||| || |  || ||||  || ||||||||  |||||| ||||||| |||| ||||||||||| |||| |    
T  28416277 aaggactttggggggttatttttcttcaaaatataaaaccctcctta--tttggggaactacaaaattgtattggatgagggttttggagggtttatacg 28416180  T
Q  286 aattcttcaaattcaatctatgttgttat 314  Q
     ||| |||||||| ||| || ||||||||    
T  28416179 tattgttcaaatttaatatacgttgttat 28416151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 346 - 387
Target Start/End: Original strand, 31037712 - 31037753
Alignment:
Q  346 tgcatttcatttaaaataagagtagagatgcaagatggaatt 387  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||    
T  31037712 tgcatttcattcaaaataatagtagagatacaagatggaatt 31037753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 311
Target Start/End: Original strand, 36906197 - 36906285
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg----------agggtctatatgaattcttcaaattcaatctatgttgt 311  Q
    ||||||||||||||||||||| |||||| ||||| ||||||          ||||| |||||||||| ||||||| |||||||||||||    
T  36906197 atttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaatccaatctatgttgt 36906285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 273
Target Start/End: Original strand, 39418037 - 39418105
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    |||||||||||||| ||| | ||  |||||||||| |||||||||||||| |||| ||||||| ||||||    
T  39418037 tttttcttcataattcaaaattcc-cttaatttggaggaactcaaaaattgtattagaggagggttttgg 39418105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 42589885 - 42589844
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgtt 309  Q
    ||||||||| | ||||||||||||||||||||||| ||||||    
T  42589885 ttttggaggatttatatgaattcttcaaattcaatttatgtt 42589844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 269 - 309
Target Start/End: Complemental strand, 1111160 - 1111120
Alignment:
Q  269 tttggagggtctatatgaattcttcaaattcaatctatgtt 309  Q
    |||||||||| ||||| ||||||||||||| ||||||||||    
T  1111160 tttggagggtttatataaattcttcaaatttaatctatgtt 1111120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 221
Target Start/End: Original strand, 4428843 - 4428887
Alignment:
Q  177 ttgaggggaaaggactttgggggttcgtttttcttcataatacaa 221  Q
    ||||| ||||| |||||||||| ||| ||||||||||||||||||    
T  4428843 ttgagaggaaaagactttggggcttcttttttcttcataatacaa 4428887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 298
Target Start/End: Original strand, 8228596 - 8228628
Alignment:
Q  266 gattttggagggtctatatgaattcttcaaatt 298  Q
    ||||||||||||| |||||||||||||||||||    
T  8228596 gattttggagggtttatatgaattcttcaaatt 8228628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 13865112 - 13865072
Alignment:
Q  274 agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| |||||||||| |||||||| |||||||||||||||    
T  13865112 agggtttatatgaatttttcaaatttaatctatgttgttat 13865072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 29612052 - 29612092
Alignment:
Q  274 agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| |||||||||| |||||||| |||||||||||||||    
T  29612052 agggtttatatgaatttttcaaattaaatctatgttgttat 29612092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 386
Target Start/End: Original strand, 32282847 - 32282895
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||| ||||||||||| | ||||| ||||||||| |||||||||||    
T  32282847 aaacttattgcatttcattcataataatagtagagatacaagatggaat 32282895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 34349776 - 34349816
Alignment:
Q  274 agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| |||||||||| |||||||||||| |||||||||||    
T  34349776 agggtttatatgaatttttcaaattcaatatatgttgttat 34349816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 1e-36; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 9096292 - 9096401
Alignment:
Q  195 gggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttca 294  Q
    ||||||||  ||||||||||||||||| ||||||| |||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||    
T  9096292 gggggttcacttttcttcataatacaa-aatcttcctaatttgggggaactcaacaattgtattggaggaggattttggagggtttatatgaattcttca 9096390  T
Q  295 aattcaatcta 305  Q
    |||||||||||    
T  9096391 aattcaatcta 9096401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 192 - 314
Target Start/End: Complemental strand, 19389928 - 19389808
Alignment:
Q  192 tttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattct 291  Q
    ||||||||||| ||| |||||||||||||| |||| || | |||||||| |||| ||||||| |||||||||||||||||||||||| || |||||||||    
T  19389928 tttgggggttcatttatcttcataatacaa-aatcctcctcatttgggg-aactaaaaaattgtattggaggaggattttggagggtttacatgaattct 19389831  T
Q  292 tcaaattcaatctatgttgttat 314  Q
    ||||||| ||||||||| |||||    
T  19389830 tcaaatttaatctatgtagttat 19389808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 37908984 - 37909092
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| ||||  | ||||| |||| ||||||||| || |||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  37908984 ttttcttcataatacaa-aatcaacctaattcggggaaactcaaaagttgtattggaggagggttttggagggtttatatgaattcttcaaattcaatct 37909082  T
Q  305 atgttgttat 314  Q
    || |||||||    
T  37909083 atattgttat 37909092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 38568438 - 38568357
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||| |||||||||||||||||||| |||||| |||| ||||||||||||||||||| |||||||||||||||    
T  38568438 atttgggggaactaaaaaattatattggaggagggttttggggggtttatatgaattcttcaaatttaatctatgttgttat 38568357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 6491153 - 6491234
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    |||||||||||| |||||||||||||||||| ||||||| | ||||||||||||||||||||| |||||||||| ||||||||    
T  6491153 ctttgggggttcatttttcttcataatacaa-aatcttcctcatttgggggaactcaaaaattgtattggaggaagattttgg 6491234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 14570111 - 14570030
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| ||||| |||||||||||||||| ||| ||||||||||| ||||||||||||||||||| |||||| ||||||||    
T  14570111 atttgggagaactaaaaaattatattggagtagggttttggagggtttatatgaattcttcaaatttaatctaagttgttat 14570030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 228 - 310
Target Start/End: Complemental strand, 3676581 - 3676499
Alignment:
Q  228 tcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttg 310  Q
    |||| |||| |||||| | ||||||| |||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||    
T  3676581 tctttatttaggggaaataaaaaattgtattggaggaggattttgaagggtttatatgaattcttcaaatttaatctatgttg 3676499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 5772832 - 5772710
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattc 290  Q
    |||||||||||   ||||||||||||||||| || | || | |||||| |||| | ||||||| |||||||||||| |||||||||||  ||| ||||||    
T  5772832 ctttgggggttaacttttcttcataatacaa-aaccctcctcatttggaggaattaaaaaattgtattggaggagggttttggagggttaataagaattc 5772734  T
Q  291 ttcaaattcaatctatgttgttat 314  Q
    |||||||| ||| |||||||||||    
T  5772733 ttcaaatttaatttatgttgttat 5772710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 314
Target Start/End: Complemental strand, 18675779 - 18675703
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||| |||||||||||| ||| ||||||||||| |||||||||||||| |||| |||||||||| ||||    
T  18675779 ggggaactaaaagattatattggagaagggttttggagggtttatatgaattcttcgaatttaatctatgttattat 18675703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 12150565 - 12150665
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatc 303  Q
    |||||||||||||||||| ||||| | ||||||  || |||| ||||||| ||||||||||||||||||| |||| || || |||||| |||||||||||    
T  12150565 tttttcttcataatacaa-aatctccctaatttaagg-aactaaaaaattgtattggaggaggattttggcgggtttagataaattctccaaattcaatc 12150662  T
Q  304 tat 306  Q
    |||    
T  12150663 tat 12150665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 38289299 - 38289414
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggagga-------ggattttggagggtctatatgaattcttcaaat 297  Q
    ||||||||||||||||||| ||  | |||||||||||||| ||||| || ||||||||||       || ||||||||||| |||| || ||||||||||    
T  38289299 ttttcttcataatacaaga-tccccctaatttgggggaacccaaaagttgtattggaggactttagagggttttggagggtttatacgagttcttcaaat 38289397  T
Q  298 tcaatctatgttgttat 314  Q
    |||||||||||||||||    
T  38289398 tcaatctatgttgttat 38289414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 310
Target Start/End: Original strand, 10437969 - 10438073
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||| ||||||||| |||| || | |||| | |||||| |||| || |||||||||||| |||||||||||  |||| ||||||||||||| |||||    
T  10437969 ttttctttataatacaa-aatcctcctcatttagaggaactaaaaagttgtattggaggagggttttggagggttaatatcaattcttcaaatttaatct 10438067  T
Q  305 atgttg 310  Q
    ||||||    
T  10438068 atgttg 10438073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 242 - 302
Target Start/End: Complemental strand, 32125325 - 32125265
Alignment:
Q  242 aactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaat 302  Q
    |||| ||||||| ||||||||||||||||| |||||| | |||||||||||||||||||||    
T  32125325 aactaaaaaattgtattggaggaggattttagagggtttgtatgaattcttcaaattcaat 32125265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 35708861 - 35708742
Alignment:
Q  195 gggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttgg-agggtctatatgaattcttc 293  Q
    ||||||| ||||||||||| | || || |||| || | ||||| ||||||| ||||||| || ||||||||| |||||| | ||| ||||||||||||||    
T  35708861 gggggttagtttttcttcaaagtataa-aatcctcctcatttgagggaactaaaaaattgtactggaggagggttttgggaaggtttatatgaattcttc 35708763  T
Q  294 aaattcaatctatgttgttat 314  Q
    ||||| ||| |||||||||||    
T  35708762 aaatttaatatatgttgttat 35708742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 314
Target Start/End: Original strand, 10843013 - 10843135
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattc 290  Q
    |||||||||||   ||||||||||||||||| || | || | |||||| |||||| ||||||| ||||| |||| | |||||| ||||  ||| ||||||    
T  10843013 ctttgggggttaacttttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattgtattgaaggacggttttggggggttaataagaattc 10843111  T
Q  291 ttcaaattcaatctatgttgttat 314  Q
    |||||||| ||| |||||||||||    
T  10843112 ttcaaatttaatttatgttgttat 10843135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 185 - 314
Target Start/End: Complemental strand, 25626713 - 25626584
Alignment:
Q  185 aaaggactttggg-ggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctata 283  Q
    ||||||||||||| ||||  ||||||||||| |||||| ||||| | ||||||| ||||||||||||||| || || | ||||||||||| || | |  |    
T  25626713 aaaggactttgggcggtttatttttcttcatgatacaa-aatctccctaatttgagggaactcaaaaattgtactgaatgaggattttgggggatttgga 25626615  T
Q  284 tgaattcttcaaattcaatctatgttgttat 314  Q
    | |||||| ||||| || |||||||||||||    
T  25626614 taaattctccaaatccattctatgttgttat 25626584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 30796792 - 30796850
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||||  ||||||| ||||||||||| ||||||| |||||||||||||||||||||    
T  30796792 ttacaagaagaaacttattgcatttcattcaaaataatagtagagatgcaagatggaat 30796850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 261 - 314
Target Start/End: Complemental strand, 5696613 - 5696560
Alignment:
Q  261 aggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||||||| ||||| | |||||| ||||||||||||||||||||    
T  5696613 aggaggattttggagggtttatataatttcttcgaattcaatctatgttgttat 5696560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 31632857 - 31632938
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||||| || | ||||| |||| | ||||||||||  || || |||||||||||| ||||||||||||||||    
T  31632857 atttgggggaactcaagaaatgtattgaaggaaggttttggagggcttaaataaattcttcaaatccaatctatgttgttat 31632938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 314
Target Start/End: Complemental strand, 13294036 - 13293964
Alignment:
Q  242 aactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||| ||||||| |||||||||||| | ||||||||| |||||| ||||||||| || ||||| |||||||||    
T  13294036 aacttaaaaattgtattggaggagggtcttggagggtttatatgtattcttcaagtttaatctctgttgttat 13293964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 17668166 - 17668114
Alignment:
Q  262 ggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||| |||||    
T  17668166 ggaggattttggagggtttacatgaattcttcaaatttaatctatgtagttat 17668114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 10295541 - 10295584
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  10295541 tggagggtttatatgaatttttcaaattcaatctatgttgttat 10295584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 17092955 - 17092998
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  17092955 tggagggtttatatgaatttttcaaattcaatctatgttgttat 17092998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 27480195 - 27480152
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  27480195 tggagggtttatatgaatttttcaaattcaatctatgttgttat 27480152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 32824645 - 32824749
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| ||||   ||||||||| |||||||||||||| ||||    |||| |||||| |||| |||| |||||||||||| |||||||    
T  32824645 ttttcttcataatacaa-aatcccattaatttggaggaactcaaaaattgtatt---tgagggttttggggggtttataagaattcttcaaa-tcaatct 32824739  T
Q  305 atgttgttat 314  Q
    ||| ||||||    
T  32824740 atgctgttat 32824749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 35868840 - 35868928
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggag-gattttgg--------agggtctatatgaattcttcaaattcaatctatgttgtt 312  Q
    |||||||||||||||||||||||||||| |||| | ||||||        ||||| |||||||||| ||||||||||||||||||||||    
T  35868840 atttgggggaactcaaaaattatattgggggagagtttttggggttatgaagggtttatatgaatttttcaaattcaatctatgttgtt 35868928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 37508413 - 37508370
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  37508413 tggagggtttatatgaatttttcaaattcaatctatgttgttat 37508370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 267 - 314
Target Start/End: Original strand, 41923212 - 41923259
Alignment:
Q  267 attttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| ||||| ||||||||||||||||||| |||||||||||||||    
T  41923212 attttgaagggtttatatgaattcttcaaatttaatctatgttgttat 41923259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 314
Target Start/End: Original strand, 1658177 - 1658278
Alignment:
Q  223 aatcttcttaatttgggggaactcaaaaattatattggaggaggatttt----------ggagggtctatatgaattcttcaaattcaatctatgttgtt 312  Q
    |||| |||| ||||||||||| ||||||||| |||||| ||||||||||          ||||||| |||||||||| ||||||||||||||||||| ||    
T  1658177 aatcctcttcatttgggggaattcaaaaattgtattgggggaggatttttggaggttatggagggtttatatgaatttttcaaattcaatctatgttatt 1658276  T
Q  313 at 314  Q
    ||    
T  1658277 at 1658278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 255 - 312
Target Start/End: Original strand, 13450511 - 13450568
Alignment:
Q  255 tattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgtt 312  Q
    |||||||||||||||||||||| | |||||||| |||||||| | ||| |||||||||    
T  13450511 tattggaggaggattttggaggatttatatgaactcttcaaaattaatttatgttgtt 13450568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 192 - 273
Target Start/End: Original strand, 13569333 - 13569413
Alignment:
Q  192 tttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    ||||||||||   ||||||||||||||||| ||| ||| | |||||| ||||||  ||||||||||||||||||| ||||||    
T  13569333 tttgggggttaacttttcttcataatacaa-aattttcctcatttggaggaactacaaaattatattggaggagggttttgg 13569413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 238 - 314
Target Start/End: Complemental strand, 3925847 - 3925771
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||||||| ||||||| |||  ||||||| | | ||||| |||||||||||||  ||||||||||||||    
T  3925847 ggggaactaaaaaattgtattggatgagagttttggacgatttatataaattcttcaaatttgatctatgttgttat 3925771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 280
Target Start/End: Original strand, 11168244 - 11168295
Alignment:
Q  231 taatttgggggaactcaaaaattatattggag--gaggattttggagggtct 280  Q
    ||||||||||||||||||||| | ||||||||  ||||||||||||||||||    
T  11168244 taatttgggggaactcaaaaaatttattggagatgaggattttggagggtct 11168295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 280 - 312
Target Start/End: Complemental strand, 35705160 - 35705128
Alignment:
Q  280 tatatgaattcttcaaattcaatctatgttgtt 312  Q
    |||||||||||||||||||||||||||||||||    
T  35705160 tatatgaattcttcaaattcaatctatgttgtt 35705128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 2021038 - 2021081
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| || |||||||||||||||||||||    
T  2021038 tggagggtttatatgaattttttaaattcaatctatgttgttat 2021081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 26149661 - 26149704
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| | |||||||||| ||||||||||||||||||||||||    
T  26149661 tggaggatttatatgaatttttcaaattcaatctatgttgttat 26149704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 1935133 - 1935087
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||| ||| ||||||||||||||| ||| |||||||||||    
T  1935133 ttttggagggtttatgtgaattcttcaaatttaatatatgttgttat 1935087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 8944100 - 8944146
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| ||| ||||||||||||||||||| ||| |||||||||||    
T  8944100 ttttggaaggtgtatatgaattcttcaaatttaatatatgttgttat 8944146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 15974395 - 15974441
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||| |||| |||||||| ||||| |||||||||||||||    
T  15974395 ttttggagggtttatacgaattctttaaatttaatctatgttgttat 15974441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 386
Target Start/End: Original strand, 29242102 - 29242160
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||||  ||||||| ||||||||||| ||||||| ||||||||| ||| |||||||    
T  29242102 ttacaagaagaaacttattgcatttcattcaaaataatagtagagatacaatatggaat 29242160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 36978852 - 36978794
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||||  ||||||| ||||||||||| | ||||| ||||||||| |||||||||||    
T  36978852 ttacaagaagaaacttattgcatttcattcataataatagtagagatacaagatggaat 36978794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 314
Target Start/End: Complemental strand, 43496903 - 43496861
Alignment:
Q  272 ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||    
T  43496903 ggagggtttatatgaattcttcaaatttaatttatgttgttat 43496861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 4841730 - 4841689
Alignment:
Q  273 gagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| ||||||||||||||||||| ||| |||||||||||    
T  4841730 gagggtttatatgaattcttcaaattgaatatatgttgttat 4841689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 9684879 - 9684771
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| || | || | ||||||||||| | |||||||  |||| |||| | |||||| |||| || |||||||||||||||  |||||    
T  9684879 ttttcttcataatacaa-aaccctcctcatttgggggaattaaaaaattgcattgaaggaaggttttggggggtttacatgaattcttcaaatctaatct 9684781  T
Q  305 atgttgttat 314  Q
    | || |||||    
T  9684780 aagtagttat 9684771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 309
Target Start/End: Original strand, 29709540 - 29709609
Alignment:
Q  240 ggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgtt 309  Q
    |||||| ||||||| ||| |||||||||||||||  ||| |||||||||| |  ||||||||| ||||||    
T  29709540 ggaactaaaaaattgtatcggaggaggattttggtaggtttatatgaattatgaaaattcaatatatgtt 29709609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 35683502 - 35683453
Alignment:
Q  265 ggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||  ||| |||||||||||||| ||| |||||||||||    
T  35683502 ggattttggagggttaataagaattcttcaaatttaatttatgttgttat 35683453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 35701070 - 35701115
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    ||||||||||||||||||||| |||||| ||||| |||||| ||||    
T  35701070 atttgggggaactcaaaaattgtattgggggagggttttggggggt 35701115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 39649581 - 39649626
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    |||||| |||||| ||||||| ||||||||||||||||||| ||||    
T  39649581 atttggaggaactaaaaaattgtattggaggaggattttggggggt 39649626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 41695029 - 41695078
Alignment:
Q  265 ggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| |||| ||| || ||||||| ||||||||||||||||||||||||    
T  41695029 ggattatggatggtttaaatgaatttttcaaattcaatctatgttgttat 41695078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 199 - 259
Target Start/End: Original strand, 5836865 - 5836924
Alignment:
Q  199 gttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattg 259  Q
    |||| |||||||||||||||||| | ||||| | ||||||||||||| ||||||| |||||    
T  5836865 gttcatttttcttcataatacaaaactcttc-tcatttgggggaacttaaaaattgtattg 5836924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 386
Target Start/End: Original strand, 9609506 - 9609554
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||| ||||||||||  ||||||| ||||||||| |||||||||||    
T  9609506 aaacttattgcatttcatacaaaataatagtagagatacaagatggaat 9609554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 15770090 - 15770141
Alignment:
Q  262 ggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||| | |||| |||||||||| || |||||||||||||||||||||    
T  15770090 ggaggatttttg-gggtttatatgaattttttaaattcaatctatgttgttat 15770141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 299
Target Start/End: Original strand, 24022851 - 24022895
Alignment:
Q  255 tattggaggaggattttggagggtctatatgaattcttcaaattc 299  Q
    |||| |||||| ||||||||||||||| ||||||||||| |||||    
T  24022851 tattagaggagaattttggagggtctaaatgaattcttcgaattc 24022895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 236 - 304
Target Start/End: Original strand, 32750654 - 32750722
Alignment:
Q  236 tgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    |||||||||| |||| || |||||| | ||| ||| |||| || |||||||||| ||||||||||||||    
T  32750654 tgggggaactaaaaatttttattggggaagggtttaggagtgtttatatgaatttttcaaattcaatct 32750722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 38302378 - 38302338
Alignment:
Q  274 agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| |||||||||| ||||||||||||||||||| ||||    
T  38302378 agggtttatatgaatttttcaaattcaatctatgttattat 38302338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 271 - 307
Target Start/End: Original strand, 41638429 - 41638465
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatg 307  Q
    |||||||| |||||||||| |||||||||||||||||    
T  41638429 tggagggtttatatgaatttttcaaattcaatctatg 41638465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 173 - 304
Target Start/End: Original strand, 82746 - 82877
Alignment:
Q  173 gactttgaggggaaaggacttt-gggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggatttt 271  Q
    ||||||||| | ||||| |||| |||||||  |||||||||||||||||| |||| || ||||||| |||||||| |||||| |||||||||| ||||||    
T  82746 gactttgagagaaaagggctttcgggggtttatttttcttcataatacaa-aatcctcctaatttgagggaactccaaaattgtattggaggatgatttt 82844  T
Q  272 ggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||| |||||||| ||||||||||||||||    
T  82845 ggagggtttatatgaactcttcaaattcaatct 82877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 65; Significance: 3e-28; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 198 - 314
Target Start/End: Original strand, 38137917 - 38138032
Alignment:
Q  198 ggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaat 297  Q
    ||||| |||||||||||||||||| |||| || | |||||||||| ||||||| || |||||||||||| | ||||| ||||||||||||||||||||||    
T  38137917 ggttcatttttcttcataatacaa-aatcctcctcatttgggggagctcaaaatttgtattggaggagggtattggaaggtctatatgaattcttcaaat 38138015  T
Q  298 tcaatctatgttgttat 314  Q
    | |||||||||||||||    
T  38138016 ttaatctatgttgttat 38138032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 38505432 - 38505324
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| || | || | |||||||||||||  |||||| |||||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  38505432 ttttcttcataatacaa-aaccctcctcatttgggggaactataaaattgtattggaggagggttttggagggtttatatgaattcttcaaatttaatct 38505334  T
Q  305 atgttgttat 314  Q
    ||||||||||    
T  38505333 atgttgttat 38505324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 195 - 314
Target Start/End: Complemental strand, 6746677 - 6746559
Alignment:
Q  195 gggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttca 294  Q
    |||||||  |||||||| ||||||||| | | ||| | ||||||||||||||||||||| ||||||||| ||  |||||||||| |||||||||||||||    
T  6746677 gggggttaatttttctttataatacaaaact-ttcctcatttgggggaactcaaaaattgtattggagggggggtttggagggtttatatgaattcttca 6746579  T
Q  295 aattcaatctatgttgttat 314  Q
    |||| || ||||||||||||    
T  6746578 aatttaacctatgttgttat 6746559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 5968114 - 5968033
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||| | ||||| || |||||||| |||||||||| ||||||||||||||||||||||||    
T  5968114 atttgggggaactcaaaaattgtattaggggagggttatggagggtttatatgaatttttcaaattcaatctatgttgttat 5968033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 335 - 400
Target Start/End: Original strand, 21223039 - 21223104
Alignment:
Q  335 agaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaattcaaatgaaaatac 400  Q
    ||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||    
T  21223039 agaaaacttaatgtatttcatttaaaataagaatagagatacaagatggaattcaaatgaaaatac 21223104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 43348300 - 43348219
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||| ||||||| |||| ||||||| |||||||||||  |||||||||||||||||| |||||||||||||||    
T  43348300 atttgggggaactaaaaaattgtattagaggagggttttggagggttaatatgaattcttcaaatttaatctatgttgttat 43348219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 196 - 311
Target Start/End: Original strand, 30183822 - 30183934
Alignment:
Q  196 ggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaa 295  Q
    ||||||| |||||||||| ||||||| |||| || || ||| ||||||||  |||||| | |||||||||||||||||||| | | ||||||||||||||    
T  30183822 ggggttcatttttcttcaaaatacaa-aatcctcctagttttggggaact--aaaattgttttggaggaggattttggaggctttgtatgaattcttcaa 30183918  T
Q  296 attcaatctatgttgt 311  Q
    ||||||||||||||||    
T  30183919 attcaatctatgttgt 30183934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 33872223 - 33872100
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggatttt-ggagggtctatatgaatt 289  Q
    |||||||||||   ||||||||||||||| | || | || | ||||||||||||| | ||||| |||||||||||| |||| ||||||| ||||||||||    
T  33872223 ctttgggggttaacttttcttcataatacta-aaccctcctcatttgggggaactaacaaattgtattggaggagggtttttggagggtttatatgaatt 33872125  T
Q  290 cttcaaattcaatctatgttgttat 314  Q
    ||||||||| |||||||||||||||    
T  33872124 cttcaaatttaatctatgttgttat 33872100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 204 - 314
Target Start/End: Original strand, 31891268 - 31891377
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatc 303  Q
    |||||||||||||||||| |  ||||| |||| ||||||||| |||| || ||||  | ||||||||||||| || ||||||||||||||||||| ||||    
T  31891268 tttttcttcataatacaaaatgcttctcaatt-gggggaactaaaaacttgtatttaaagaggattttggagagtttatatgaattcttcaaatttaatc 31891366  T
Q  304 tatgttgttat 314  Q
    |||||||||||    
T  31891367 tatgttgttat 31891377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 19644311 - 19644393
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaa-ttcttcaaattcaatctatgttgttat 314  Q
    |||| |||||||||||||||| ||||||| |||| ||||||||| | |||||||| || ||||||||||||||||||||||||    
T  19644311 atttaggggaactcaaaaattgtattggatgagggttttggaggatttatatgaattttttcaaattcaatctatgttgttat 19644393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 328 - 439
Target Start/End: Complemental strand, 34899221 - 34899103
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagag-------tagagatgcaagatggaattcaaatgaaaatacataaatcggcatgacatgaa 420  Q
    ||||| ||||||| ||||||||||||||||||||||||||       ||||||| |||||||||||||||||||||||||| |||    ||||||||| |    
T  34899221 ttacaggagaaaatttaatgcatttcatttaaaataagagcagagattagagatacaagatggaattcaaatgaaaatacaaaaactaacatgacatgga 34899122  T
Q  421 tctaccatagctaaactat 439  Q
     ||||  ||||||||||||    
T  34899121 gctacgctagctaaactat 34899103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 233 - 305
Target Start/End: Complemental strand, 46745658 - 46745587
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatcta 305  Q
    ||||||||||||||||||||| ||||||||||||||| ||| |||| |||||||||| || ||||||||||||    
T  46745658 atttgggggaactcaaaaattgtattggaggaggattctgg-gggtttatatgaattttttaaattcaatcta 46745587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 187 - 312
Target Start/End: Original strand, 41471413 - 41471537
Alignment:
Q  187 aggactttggggg-ttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatg 285  Q
    ||||||||||||| ||| |||||||| | ||||||| |||| || | ||||||||||||| |||||||  |  |||||||| ||||||| ||| |||| |    
T  41471413 aggactttggggggttcatttttcttaagaatacaa-aatcctcctcatttgggggaactgaaaaattgcac-ggaggagggttttggaaggtttatacg 41471510  T
Q  286 aattcttcaaattcaatctatgttgtt 312  Q
    ||||||||||||| |||||||||||||    
T  41471511 aattcttcaaatttaatctatgttgtt 41471537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 45510362 - 45510443
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| || ||||||||||||||||| |||| ||||||||||| || | |||||||||||||| |||||| || |||||    
T  45510362 atttggggaaattcaaaaattatattggatgagggttttggagggtttagacgaattcttcaaatttaatctaagtagttat 45510443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 41002322 - 41002231
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggatttt----------ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||||||||||||||||| ||||| ||||          ||||||| |||||||||| ||||||||||||||||||||||||    
T  41002322 atttgggggaactcaaaaattatattgggggagggttttagggggttatggagggtttatatgaatttttcaaattcaatctatgttgttat 41002231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 205 - 308
Target Start/End: Original strand, 43741688 - 43741790
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| | ||| || | |||||| ||||||||||||| ||||  ||||||||||||  |||| | ||||||||||||||||| ||| |    
T  43741688 ttttcttcataatacaaaactctcctca-tttgggagaactcaaaaattgtattaaaggaggattttgtggggtttgtatgaattcttcaaatttaattt 43741786  T
Q  305 atgt 308  Q
    ||||    
T  43741787 atgt 43741790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 44720104 - 44720182
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtctatatgaa--ttcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||||| |||||||||||| || |||||||| ||||||||  || |||| ||||||||||| |||||||    
T  44720104 ggggaactcaaaaattgtattggaggagggttatggagggtttatatgaatttttttcatattcaatctatattgttat 44720182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 43188880 - 43188958
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||| ||| ||||||  | || || |||||||| |||||||||| ||||||||||||||||||||||||    
T  43188880 atttgggggaactcaaatattgtattgg--gtgg-ttatggagggtttatatgaatttttcaaattcaatctatgttgttat 43188958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 425319 - 425392
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    ||||||||||||||||| || |  | ||||||||||||||||||||| | ||||||||||| |||||| |||||    
T  425319 ttttcttcataatacaaaaacccccctaatttgggggaactcaaaaagtgtattggaggagaattttgaagggt 425392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 16805665 - 16805593
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    ||||||||||||||||| || |||||| |||||| |||||| ||||||| |||||||||||| |||||| ||||    
T  16805665 ttttcttcataatacaa-aaccttcttcatttggaggaactaaaaaattgtattggaggagggttttggggggt 16805593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 205 - 310
Target Start/End: Complemental strand, 45940498 - 45940394
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| || | || | |||||| |||||| ||||||| |||||||| ||  |||||||||||  ||| |||||||||||||| ||| |    
T  45940498 ttttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattgtattggagtagagttttggagggttaataagaattcttcaaatttaattt 45940400  T
Q  305 atgttg 310  Q
    ||||||    
T  45940399 atgttg 45940394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 233 - 278
Target Start/End: Complemental strand, 47276073 - 47276028
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||    
T  47276073 atttgggggaactcaaaaattatattgggggaggattttggggggt 47276028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 14676279 - 14676331
Alignment:
Q  262 ggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||| || |||||||||||||||| ||||||||| |||||    
T  14676279 ggaggattttggagggtttacatgaattcttcaaatttaatctatgtagttat 14676331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 28437613 - 28437522
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattt----------tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| ||||||||| ||||||          |||||||| ||||| |||| ||||||||||||||||||||||||    
T  28437613 atttgggggaactcaaaaattgtattggaggtggattttggggggttatggagggtttatatcaatttttcaaattcaatctatgttgttat 28437522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 205 - 276
Target Start/End: Original strand, 7181745 - 7181815
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagg 276  Q
    ||||||||||||||||| | || ||| ||||||||||||||||||||||  ||||||| || ||||||||||    
T  7181745 ttttcttcataatacaaaattcctct-aatttgggggaactcaaaaattgcattggagcagtattttggagg 7181815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 314
Target Start/End: Complemental strand, 31355890 - 31355781
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatc 303  Q
    ||||||||||||||||| |||||   ||||||||||||||||||||||||  |  |||||  ||||||||||||| |  || |||||| ||||| ||||     
T  31355890 tttttcttcataataca-gaatccgtttaatttgggggaactcaaaaattgcaaaggaggctgattttggagggtttggataaattctccaaatccaatt 31355792  T
Q  304 tatgttgttat 314  Q
    |||||| ||||    
T  31355791 tatgttcttat 31355781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 314
Target Start/End: Complemental strand, 43665191 - 43665149
Alignment:
Q  272 ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| |||||||||| ||||||||||||||||||||||||    
T  43665191 ggagggtttatatgaatttttcaaattcaatctatgttgttat 43665149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 280 - 314
Target Start/End: Original strand, 45066790 - 45066824
Alignment:
Q  280 tatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||||||||||||||||||||||||    
T  45066790 tatatgaattcttcaaattcaatctatgttgttat 45066824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 38235846 - 38235895
Alignment:
Q  265 ggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| |||||||| |||||||||| |||||||||||||||| |||||||    
T  38235846 ggattatggagggtttatatgaatttttcaaattcaatctatattgttat 38235895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 3658582 - 3658491
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggatttt----------ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||| ||||| ||||          ||||||  |||||||||| ||||||||||||||||||||||||    
T  3658582 atttgggggaactcaaaaattgtattgggggagggttttagggggttatggagggattatatgaatttttcaaattcaatctatgttgttat 3658491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 386
Target Start/End: Original strand, 25611367 - 25611415
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||| ||||||||||| ||||||| ||||||||| |||||||||||    
T  25611367 aaacttattgcatttcattcaaaataatagtagagatacaagatggaat 25611415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 30081025 - 30081073
Alignment:
Q  266 gattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| |||||| ||||||||||||||| ||| |||||||||||||||    
T  30081025 gattttagagggtttatatgaattcttcagatttaatctatgttgttat 30081073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 23620816 - 23620773
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||| ||| |||||||||| ||||||||||||||||||||||||    
T  23620816 tggatggtttatatgaatttttcaaattcaatctatgttgttat 23620773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 314
Target Start/End: Original strand, 30081390 - 30081469
Alignment:
Q  235 ttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||| |||||| ||||||| ||| || ||  | ||||||||||| ||| ||||||||||||||| ||| |||||||||||    
T  30081390 ttggaggaactaaaaaattgtatcggtggtaggttttggagggtttatgtgaattcttcaaatttaatatatgttgttat 30081469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 33406655 - 33406612
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||    
T  33406655 tggagggtttatatcaatttttcaaattcaatctatgttgttat 33406612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 237 - 314
Target Start/End: Complemental strand, 34399104 - 34399030
Alignment:
Q  237 gggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||||||  |||||||||    |||| ||||| | |||||||||||||||||||||| | ||||||||    
T  34399104 gggggaactcaaaaattgcattggaggac---tttgaagggtttttatgaattcttcaaattcaatccacgttgttat 34399030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 312
Target Start/End: Original strand, 42220093 - 42220136
Alignment:
Q  269 tttggagggtctatatgaattcttcaaattcaatctatgttgtt 312  Q
    |||||||||| |||||||||| |||||||||||||||| |||||    
T  42220093 tttggagggtttatatgaatttttcaaattcaatctatattgtt 42220136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 42620375 - 42620332
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| |||||||||||||||| |||||||    
T  42620375 tggagggtttatatgaatttttcaaattcaatctatattgttat 42620332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 371
Target Start/End: Complemental strand, 42885942 - 42885899
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtaga 371  Q
    ||||||||||||||||||| ||||||||||| ||||||| ||||    
T  42885942 ttacaagagaaaacttaattcatttcatttataataagaataga 42885899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 12884826 - 12884781
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaa 251  Q
    ||||||||||||||||| ||||  |||||||||||||||||||||||    
T  12884826 ttttcttcataatacaa-aatccccttaatttgggggaactcaaaaa 12884781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 17818345 - 17818387
Alignment:
Q  272 ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| || |||||||||||||||| |||||||||||||||    
T  17818345 ggagggtttagatgaattcttcaaatttaatctatgttgttat 17818387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 23362434 - 23362376
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||||  ||| ||| ||||||||||| ||||||| ||||||||| |||||||||||    
T  23362434 ttacaagaagaaatttattgcatttcattcaaaataatagtagagatacaagatggaat 23362376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 308
Target Start/End: Complemental strand, 24924684 - 24924576
Alignment:
Q  198 ggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaat 297  Q
    ||||| |||||||||||||||||| || | || | ||||| || ||||  |||||| |||| |||||   ||||||| ||| ||||||||||||||||||    
T  24924684 ggttcatttttcttcataatacaa-aaccctcctcatttgagg-aacttgaaaattgtatttgaggaaagttttggatggtttatatgaattcttcaaat 24924587  T
Q  298 tcaatctatgt 308  Q
    | |||||||||    
T  24924586 ttaatctatgt 24924576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 298
Target Start/End: Complemental strand, 32430029 - 32429937
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaatt 298  Q
    ||||||||| |||| ||| |||| |||| | || |||||||||||||| | |||||||| ||  |||| |||||| |||||||||||||||||||    
T  32430029 tttttcttcgtaatgcaa-aatcctcttcaatttggggaactcaaaaaatgtattggag-agagtttttgagggtttatatgaattcttcaaatt 32429937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 314
Target Start/End: Complemental strand, 39670885 - 39670843
Alignment:
Q  272 ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| |||||||||| ||||||||||||||||||| ||||    
T  39670885 ggagggtttatatgaatttttcaaattcaatctatgtttttat 39670843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 40187504 - 40187446
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||||  ||||||| ||||||||||| | ||||| ||||||||| |||||||||||    
T  40187504 ttacaagaagaaacttattgcatttcattcataataatagtagagatacaagatggaat 40187446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 1277998 - 1278039
Alignment:
Q  273 gagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| ||||||||||||||||||| ||| |||||||||||    
T  1277998 gagggtttatatgaattcttcaaatttaatatatgttgttat 1278039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 2826276 - 2826227
Alignment:
Q  265 ggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||| | | ||||||||||||||||||| |||| ||||||||||    
T  2826276 ggattttggaagctttatatgaattcttcaaatttaatcaatgttgttat 2826227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 386
Target Start/End: Original strand, 3962301 - 3962346
Alignment:
Q  341 cttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    |||| ||||||||||| ||||||| ||||||||| |||||||||||    
T  3962301 cttattgcatttcattcaaaataatagtagagatacaagatggaat 3962346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 280 - 313
Target Start/End: Complemental strand, 10591918 - 10591885
Alignment:
Q  280 tatatgaattcttcaaattcaatctatgttgtta 313  Q
    ||||||||||||||||||| ||||||||||||||    
T  10591918 tatatgaattcttcaaatttaatctatgttgtta 10591885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 314
Target Start/End: Original strand, 23550758 - 23550888
Alignment:
Q  192 tttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggatt----------ttggagggtcta 281  Q
    ||||||||||  ||||||||||||||| || || ||| || ||||||||||||| ||   || |||||||||||||||          ||| ||||| ||    
T  23550758 tttgggggttaatttttcttcataatataa-aacctttttcatttgggggaactaaagcgttgtattggaggaggattttgagtggtattgaagggttta 23550856  T
Q  282 tatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||| |||||||||||||||    
T  23550857 tatgaattcttcaaatt-aatctatgttgttat 23550888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 2826318 - 2826278
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    ||||||||||||| ||||||| |||||||||||| ||||||    
T  2826318 atttgggggaactaaaaaattgtattggaggagggttttgg 2826278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 386
Target Start/End: Complemental strand, 6596281 - 6596233
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||| ||||||||||| ||||||| |||||| || |||||||||||    
T  6596281 aaacttattgcatttcattcaaaataatagtagatatacaagatggaat 6596233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 13044208 - 13044248
Alignment:
Q  274 agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| ||||||||||||||||||| ||| |||||||||||    
T  13044208 agggtttatatgaattcttcaaatttaatatatgttgttat 13044248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 386
Target Start/End: Complemental strand, 14160599 - 14160551
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||| ||||||||||| ||||||| ||||||||| ||||| |||||    
T  14160599 aaacttattgcatttcattcaaaataatagtagagatacaagaaggaat 14160551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 19791724 - 19791768
Alignment:
Q  270 ttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||| ||||| ||||||||||||| ||| |||||||||||    
T  19791724 ttggagggtttatataaattcttcaaatttaatttatgttgttat 19791768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 34652122 - 34652082
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    ||||||||||||||||||||| |||||| ||||| ||||||    
T  34652122 atttgggggaactcaaaaattgtattgggggagggttttgg 34652082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 206 - 278
Target Start/End: Original strand, 42253942 - 42254013
Alignment:
Q  206 tttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    |||||||||||||||| || | || | |||||| |||||| ||||||||||||| |||||| |||||| ||||    
T  42253942 tttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattatattgaaggagggttttggggggt 42254013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 42267027 - 42266987
Alignment:
Q  274 agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| ||||||||| ||||||||| |||||||||||||||    
T  42267027 agggtttatatgaatgcttcaaatttaatctatgttgttat 42266987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 242 - 298
Target Start/End: Complemental strand, 42593173 - 42593117
Alignment:
Q  242 aactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaatt 298  Q
    ||||||||| |||| |||||||| | ||||||||||| || ||||||| ||||||||    
T  42593173 aactcaaaatttatgttggaggatggttttggagggtttacatgaattattcaaatt 42593117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 61; Significance: 7e-26; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 334 - 463
Target Start/End: Complemental strand, 31592448 - 31592323
Alignment:
Q  334 gagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaattcaaatgaaaatacataaatcggcatgacatgaatctaccatagcta 433  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||  |||   |||||||||| | ||||| ||||||    
T  31592448 gagaaaatttaatgcatttcatttaaaaaaagagtagagatacaagatggaattcgaatgaaaatacggaaactagcatgacatggagctaccctagcta 31592349  T
Q  434 aactatatatgagcaacttcattgacttgt 463  Q
    |||    ||||||||||||||||| |||||    
T  31592348 aac----tatgagcaacttcattggcttgt 31592323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 28848901 - 28848779
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattc 290  Q
    |||||||| ||| ||||||||||||| |||| || | || | ||||||||||||||||||||| |||||||||||| ||||||| ||| || ||||||||    
T  28848901 ctttggggtttcatttttcttcataacacaa-aaccctcctcatttgggggaactcaaaaattgtattggaggagggttttggatggtttacatgaattc 28848803  T
Q  291 ttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||| || |||||    
T  28848802 ttcaaatttaatctaagtagttat 28848779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 51246634 - 51246554
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||||||||| |||| |||||| |||||||||| |||||||||||||||| |||||||    
T  51246634 atttgggggaactcaaaaattgtattggaggagggtttt-gagggtttatatgaatttttcaaattcaatctattttgttat 51246554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 206 - 306
Target Start/End: Complemental strand, 30543450 - 30543351
Alignment:
Q  206 tttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatcta 305  Q
    |||||||||||||||| ||||||| | || |||||||||||||||||| |||||  ||||| ||||||||||| || |||||||||||||||| ||||||    
T  30543450 tttcttcataatacaa-aatcttcctcatgtgggggaactcaaaaattgtattgctggagggttttggagggtttacatgaattcttcaaatttaatcta 30543352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 52073560 - 52073438
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattc 290  Q
    |||||||| ||| |||||||||||||| ||| || | || | ||||||||||||||||||||| || | ||||||| ||||||||||| || |||||||     
T  52073560 ctttggggtttcatttttcttcataattcaa-aaccctcctcatttgggggaactcaaaaattgtactagaggagggttttggagggtttagatgaattt 52073462  T
Q  291 ttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||| || |||||    
T  52073461 ttcaaattcaatctaagtagttat 52073438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 204 - 314
Target Start/End: Original strand, 50476520 - 50476629
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatc 303  Q
    ||||| |||||||||||| ||||  | | ||||| ||||||||||||||| |||||||||||| |||| |||||| |||||||||| || || |||||||    
T  50476520 tttttattcataatacaa-aatccccctcatttgagggaactcaaaaattgtattggaggagggttttcgagggtttatatgaattttttaatttcaatc 50476618  T
Q  304 tatgttgttat 314  Q
    |||||||||||    
T  50476619 tatgttgttat 50476629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 15463830 - 15463911
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||| ||||||| |||||| ||||| || |||||||| |||||||||| |||||||||||||||| |||||||    
T  15463830 atttgggggaactgaaaaattgtattgggggagggttatggagggtttatatgaatttttcaaattcaatctattttgttat 15463911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 17760573 - 17760465
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| || | || | |||||| |||||| ||||||| ||||||||| || |||||||||||  ||| |||||||||||||| |||||    
T  17760573 ttttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattgtattggaggggggttttggagggttaataagaattcttcaaatttaatct 17760475  T
Q  305 atgttgttat 314  Q
    ||||||||||    
T  17760474 atgttgttat 17760465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 332 - 440
Target Start/End: Original strand, 3295284 - 3295392
Alignment:
Q  332 aagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaattcaaatgaaaatacataaatcggcatgacatgaatctaccatagc 431  Q
    ||||||||||||||||||||| |||||||| |||||||||||| ||||||| ||||| ||||||||||   || |  || ||||||||| ||||| |||     
T  3295284 aagagaaaacttaatgcattttatttaaaacaagagtagagatacaagatgaaattcgaatgaaaatatggaagttagcgtgacatgaaactaccctaga 3295383  T
Q  432 taaactata 440  Q
    |||||||||    
T  3295384 taaactata 3295392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 34154426 - 34154318
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| || |||| | |||||| |||||| ||||||| ||||||||| || |||||||||||  ||| |||||||| ||||| ||| |    
T  34154426 ttttcttcataatacaa-aaccttcctcatttggaggaactaaaaaattgtattggaggggggttttggagggttaataagaattctttaaatttaattt 34154328  T
Q  305 atgttgttat 314  Q
    ||||||||||    
T  34154327 atgttgttat 34154318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 43036384 - 43036303
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| ||||| ||||||| |||||||||  | ||| ||||||| ||||||||||||||||||| |||||||||||||||    
T  43036384 atttgggagaactaaaaaattgtattggagggaggtttgggagggtttatatgaattcttcaaatttaatctatgttgttat 43036303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 235 - 314
Target Start/End: Complemental strand, 938307 - 938231
Alignment:
Q  235 ttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||||||||||||||| ||    || |||||||| ||||||| || ||||||||||||||||||||||||    
T  938307 ttgggggaactcaaaaattatattgggggg---ttatggagggtttatatgattttttcaaattcaatctatgttgttat 938231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 33324644 - 33324724
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| ||||||| ||||||| |||| ||||||| |||| |||||| ||||||||||||||||||| |||| ||||||||||    
T  33324644 atttgagggaact-aaaaattgtattagaggagggttttagagggtttatatgaattcttcaaatttaatcaatgttgttat 33324724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 34750076 - 34749995
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||| ||||||||||| ||| | |||||  |||||||||||| ||| ||||| |||||    
T  34750076 atttgggggaactcaaaaattgtattggtggaggattttgaaggatttatatttattcttcaaatttaatttatgtagttat 34749995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 241 - 314
Target Start/End: Original strand, 50226058 - 50226131
Alignment:
Q  241 gaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| ||||||| |||||||||||  |||| |||||| |||||||||||||| |||| |||||||||||||||    
T  50226058 gaactaaaaaattgtattggaggagcgtttttgagggtttatatgaattcttctaatttaatctatgttgttat 50226131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 310
Target Start/End: Complemental strand, 52068235 - 52068131
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| | ||| || | ||||| |||||| ||||||| |||||||||||| |||||| ||||  ||| |||||||||||||| ||| |    
T  52068235 ttttcttcataatacaaaactctcctca-tttggaggaactaaaaaattgtattggaggagggttttggggggttaataagaattcttcaaatttaattt 52068137  T
Q  305 atgttg 310  Q
    ||||||    
T  52068136 atgttg 52068131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 239 - 314
Target Start/End: Complemental strand, 35619569 - 35619494
Alignment:
Q  239 gggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| ||||||| ||||||| |||| ||||| ||||| | ||||||||||||||||| ||| |||||||||||    
T  35619569 gggaactaaaaaattgtattggatgagggttttgaagggtttgtatgaattcttcaaatttaatatatgttgttat 35619494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 233 - 309
Target Start/End: Complemental strand, 40707267 - 40707189
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggagga--ttttggagggtctatatgaattcttcaaattcaatctatgtt 309  Q
    ||||||||||||||||||||| |||||| || ||   || |||||||| |||||||||| |||||||||||||||||||    
T  40707267 atttgggggaactcaaaaattgtattgggggggggggttatggagggtttatatgaatttttcaaattcaatctatgtt 40707189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 39889731 - 39889638
Alignment:
Q  231 taatttgggggaactcaaaaattatattggaggaggattttgg----------agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||||| |||||| ||||| ||||||          ||||| |||||||||| ||||||||||||||||||||||||    
T  39889731 taatttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatctatgttgttat 39889638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 204 - 273
Target Start/End: Complemental strand, 41428092 - 41428025
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    ||||||||||||||  |||||||| || | ||  ||||||||||||||||||||||||||||||||||||    
T  41428092 tttttcttcataatgaaagaatctcctcattt--ggggaactcaaaaattatattggaggaggattttgg 41428025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 47206494 - 47206404
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg---------agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||| ||| ||||||||         ||||| |||||||||| ||||||||||||||||||||||||    
T  47206494 atttgggggaactcaaaaattgtattgggggaagattttgggggttatggagggtttatatgaatttttcaaattcaatctatgttgttat 47206404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 313
Target Start/End: Original strand, 36325774 - 36325815
Alignment:
Q  272 ggagggtctatatgaattcttcaaattcaatctatgttgtta 313  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  36325774 ggagggtttatatgaattcttcaaattcaatctatgttgtta 36325815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 256 - 313
Target Start/End: Original strand, 50587077 - 50587134
Alignment:
Q  256 attggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgtta 313  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||| || |||||||||||    
T  50587077 attggaggagggttttgaagggtttatatgaattcttcaaatttaaactatgttgtta 50587134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 23871534 - 23871443
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg----------agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||| ||||| ||||||          ||||| |||||||||| ||||||||||||||||||||||||    
T  23871534 atttgggggaactcaaaaattgtattggcggagggttttggggggttacggagggtttatatgaatttttcaaattcaatctatgttgttat 23871443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 310
Target Start/End: Original strand, 36269726 - 36269840
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggag----------gattttggagggtctatatgaattcttca 294  Q
    ||||||||||||||||| || | || | ||||||||||||| ||||||| |||||||||||          | ||||||||| | |||||||||||||||    
T  36269726 ttttcttcataatacaa-aaccctcctcatttgggggaactaaaaaattgtattggaggagagtttcggggggttttggaggatttatatgaattcttca 36269824  T
Q  295 aattcaatctatgttg 310  Q
    ||||||||||||||||    
T  36269825 aattcaatctatgttg 36269840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 38795020 - 38795072
Alignment:
Q  262 ggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| ||||||||||| |||||||||| ||||| ||||||||||||||||||    
T  38795020 ggaggtttttggagggtttatatgaatttttcaatttcaatctatgttgttat 38795072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 47905760 - 47905669
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggatttt----------ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||| ||||| ||||          ||||||| |||||||||| ||||||||||||||||||||||||    
T  47905760 atttgggggaactcaaaaattgtattgggggagggtttttgggggttatggagggtttatatgaatttttcaaattcaatctatgttgttat 47905669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 896518 - 896475
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  896518 tggagggtttatatgaatttttcaaattcaatctatgttgttat 896475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 5970543 - 5970421
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattc 290  Q
    |||||||||||  ||||||||||||||| | ||| | || |  ||||| |||||| |||| || ||||||| |||  |||| |||||| |||||||||||    
T  5970543 ctttgggggttaatttttcttcataatata-gaaccctcattgtttggtggaactaaaaagttgtattggatgagagtttttgagggtttatatgaattc 5970445  T
Q  291 ttcaaattcaatctatgttgttat 314  Q
    |||||||| | ||||| |||||||    
T  5970444 ttcaaatttattctatattgttat 5970421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 17556677 - 17556732
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaat 288  Q
    ||||||||||||| ||||||| |||||||||||| |||||| |||| |||||||||    
T  17556677 atttgggggaactaaaaaattctattggaggagggttttggggggtttatatgaat 17556732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 32299160 - 32299203
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  32299160 tggagggtttatatgaatttttcaaattcaatctatgttgttat 32299203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 199 - 298
Target Start/End: Complemental strand, 35604360 - 35604262
Alignment:
Q  199 gttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaatt 298  Q
    |||| ||||| ||||||| |||| | ||| |||||||||||  |||||||||||| ||||  |||| ||||||| ||||| |||||||||| ||||||||    
T  35604360 gttcatttttgttcataacacaaaattct-cttaatttgggaaaactcaaaaattgtattaaaggacgattttgaagggtttatatgaatttttcaaatt 35604262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 42162076 - 42162033
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  42162076 tggagggtttatatgaatttttcaaattcaatctatgttgttat 42162033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 43572023 - 43571945
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||| ||| |||||| ||    || |||||| | |||||||||| ||||||||||||||||||||||||    
T  43572023 atttgggggaactcaaatattgtattgggggg---ttatggaggatttatatgaatttttcaaattcaatctatgttgttat 43571945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 314
Target Start/End: Complemental strand, 20712238 - 20712196
Alignment:
Q  272 ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| ||||| |||||||||||||||||||||||||||||    
T  20712238 ggagggtttatataaattcttcaaattcaatctatgttgttat 20712196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 36886924 - 36886970
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||| |||||||||| |||||||| |||||||||||||||    
T  36886924 ttttggagggtttatatgaatttttcaaatttaatctatgttgttat 36886970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 39886950 - 39886904
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| || ||||||||||||||||||| |||||||||||||||    
T  39886950 ttttggagagtttatatgaattcttcaaatttaatctatgttgttat 39886904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 273
Target Start/End: Complemental strand, 41817415 - 41817330
Alignment:
Q  187 aggactttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    |||||||||||||||   ||||||||||||||||| || | || | |||||| |||||| ||||||| |||||||||||| ||||||    
T  41817415 aggactttgggggttaacttttcttcataatacaa-aaccctcatcatttggaggaactaaaaaattgtattggaggagggttttgg 41817330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 13255404 - 13255445
Alignment:
Q  273 gagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| |||||||||| ||||||||||||||||||||||||    
T  13255404 gagggtttatatgaatttttcaaattcaatctatgttgttat 13255445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 42488648 - 42488607
Alignment:
Q  273 gagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| |||||||||| ||||||||||||||||||||||||    
T  42488648 gagggtttatatgaatttttcaaattcaatctatgttgttat 42488607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 33854867 - 33854819
Alignment:
Q  266 gattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||| || |||||||||| |||||||| |||||||||||||||    
T  33854867 gattttggagcgtttatatgaatttttcaaatttaatctatgttgttat 33854819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 33926055 - 33926103
Alignment:
Q  266 gattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||| || |||||||||| |||||||| |||||||||||||||    
T  33926055 gattttggagcgtttatatgaatttttcaaatttaatctatgttgttat 33926103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 2175392 - 2175435
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| | |||||||| ||||||||||||||||||||||||    
T  2175392 tggagggtttgtatgaatttttcaaattcaatctatgttgttat 2175435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 2925958 - 2925915
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| |||||||| |||||||||||||||    
T  2925958 tggagggtttatatgaatttttcaaatttaatctatgttgttat 2925915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 8156360 - 8156317
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||    
T  8156360 tggagggtttatatcaatttttcaaattcaatctatgttgttat 8156317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 14153169 - 14153212
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||    
T  14153169 tggagggtttatattaatttttcaaattcaatctatgttgttat 14153212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 17688397 - 17688440
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| |||||||||||| |||||||||||    
T  17688397 tggagggtttatatgaatttttcaaattcaatatatgttgttat 17688440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 26940651 - 26940694
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||| ||||||||||||    
T  26940651 tggagggtttatatgaatttttcaaattcaacctatgttgttat 26940694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 27500042 - 27500085
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| | |||||||||| ||||||||||||||||||||||||    
T  27500042 tggaggatttatatgaatttttcaaattcaatctatgttgttat 27500085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 314
Target Start/End: Original strand, 28748216 - 28748291
Alignment:
Q  239 gggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| ||||||| ||||||| ||   ||||  ||||| |||||||||| || |||||||||||||||||||||    
T  28748216 gggaacttaaaaattgtattggatgaaagtttttaagggtttatatgaattttttaaattcaatctatgttgttat 28748291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 273
Target Start/End: Original strand, 33643601 - 33643683
Alignment:
Q  191 ctttgggg-gttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    |||||||| |||| |||||||||||||||||| | ||| ||| |||||| ||| ||||||| ||||||||| ||||| ||||||    
T  33643601 ctttggggagttcatttttcttcataatacaatattctcctt-atttggaggatctcaaaagttatattggcggagggttttgg 33643683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 192 - 271
Target Start/End: Original strand, 34738286 - 34738364
Alignment:
Q  192 tttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggatttt 271  Q
    ||||| ||||| |||||||||||||||||| |||| |||| ||||  ||||||||| || ||  ||||||||||||||||    
T  34738286 tttggaggttcatttttcttcataatacaa-aatcctcttcatttaagggaactcataagtttgattggaggaggatttt 34738364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 255 - 314
Target Start/End: Original strand, 48865453 - 48865512
Alignment:
Q  255 tattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| ||||||||||||||||  || || | |||||||||| ||||||||||||||||    
T  48865453 tattgggggaggattttggagggcttacataagttcttcaaatccaatctatgttgttat 48865512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 280 - 314
Target Start/End: Original strand, 7964041 - 7964075
Alignment:
Q  280 tatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||| ||||||||||||||||||||||||    
T  7964041 tatatgaatttttcaaattcaatctatgttgttat 7964075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 38795432 - 38795386
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| ||| ||||||||||||||||||| ||||| |||||||||    
T  38795432 ttttggaaggtttatatgaattcttcaaatttaatctgtgttgttat 38795386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 39508825 - 39508871
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| || |||||||||| |||||||||||||||| |||||||    
T  39508825 ttttggagagtttatatgaatttttcaaattcaatctattttgttat 39508871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 238 - 314
Target Start/End: Complemental strand, 45752290 - 45752217
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||||||| |||||| |||   ||| ||||||| ||| ||||||||||||||| ||| |||||||||||    
T  45752290 ggggaactaaaaaattgtattggggga---tttgggagggtttatgtgaattcttcaaatttaatatatgttgttat 45752217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 6015491 - 6015532
Alignment:
Q  273 gagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| ||||||||||||||||||| ||| |||||||||||    
T  6015491 gagggtttatatgaattcttcaaatttaatatatgttgttat 6015532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 382
Target Start/End: Original strand, 15393510 - 15393551
Alignment:
Q  341 cttaatgcatttcatttaaaataagagtagagatgcaagatg 382  Q
    |||||||||||||||||| ||||| ||||||||| |||||||    
T  15393510 cttaatgcatttcatttataataacagtagagatacaagatg 15393551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 198 - 259
Target Start/End: Complemental strand, 27102929 - 27102869
Alignment:
Q  198 ggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattg 259  Q
    ||||| |||||||||||||||||| |||  |||| |||||||| |||||||||||| |||||    
T  27102929 ggttcatttttcttcataatacaa-aatgctcttcatttggggaaactcaaaaattgtattg 27102869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 310
Target Start/End: Original strand, 27255192 - 27255296
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| || | || | |||||  |||||| ||||| | ||| || ||||| |||||||||||  ||| ||||| |||||||| |||||    
T  27255192 ttttcttcataatacaa-aaccctcctcatttgaaggaactaaaaaaatgtatcgggggagggttttggagggttaataagaatttttcaaatttaatct 27255290  T
Q  305 atgttg 310  Q
    ||||||    
T  27255291 atgttg 27255296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 30538778 - 30538729
Alignment:
Q  265 ggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| |||||||| |||||||| | |||||||||||| |||||||||||    
T  30538778 ggattatggagggtttatatgaaattttcaaattcaatttatgttgttat 30538729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 33991551 - 33991596
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    ||||||||||||||||||||| |||||| ||||| |||||| ||||    
T  33991551 atttgggggaactcaaaaattgtattgggggagggttttggggggt 33991596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 257 - 314
Target Start/End: Original strand, 48327319 - 48327376
Alignment:
Q  257 ttggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| || |||| |||||||| ||||| ||| |||||||||||||| ||||||||||    
T  48327319 ttggaagaagattatggagggtttatataaatccttcaaattcaatccatgttgttat 48327376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 5584488 - 5584555
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    ||||||||||||||||| || | || | |||||| |||||| ||||||| |||||||||||| ||||||    
T  5584488 ttttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattgtattggaggagggttttgg 5584555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 12293820 - 12293860
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    ||||||||||||||||||||| |||||| ||||| ||||||    
T  12293820 atttgggggaactcaaaaattgtattgggggagggttttgg 12293860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 282 - 314
Target Start/End: Complemental strand, 13061409 - 13061377
Alignment:
Q  282 tatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||||||||||||||||||||||||    
T  13061409 tatgaatttttcaaattcaatctatgttgttat 13061377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 41432786 - 41432742
Alignment:
Q  270 ttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||| || |||||||||||||||| ||||||||| |||||    
T  41432786 ttggagggtttacatgaattcttcaaatttaatctatgtagttat 41432742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 282 - 314
Target Start/End: Original strand, 42806239 - 42806271
Alignment:
Q  282 tatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||| |||||||||||||||    
T  42806239 tatgaattcttcaaatttaatctatgttgttat 42806271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 386
Target Start/End: Complemental strand, 48522299 - 48522251
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||| ||||||||||||| ||||| |||||||||  ||||||||||    
T  48522299 aaacttattgcatttcatttataataatagtagagatataagatggaat 48522251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 59; Significance: 1e-24; HSPs: 66)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 328 - 463
Target Start/End: Original strand, 16349455 - 16349586
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaattcaaatgaaaatacataaatcggcatgacatgaatctacca 427  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| || |||| |||||||||||| ||||| |||   |||||| ||||| ||||      
T  16349455 ttacaagagaaatcttaatgcatttcatttaaaataagagtatagatacatgatgaaattcaaatgaacatacaaaaactagcatgatatgaagctactc 16349554  T
Q  428 tagctaaactatatatgagcaacttcattgacttgt 463  Q
    || ||||||    |||||||||||||||||||||||    
T  16349555 tatctaaac----tatgagcaacttcattgacttgt 16349586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 191 - 312
Target Start/End: Complemental strand, 5322231 - 5322111
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattc 290  Q
    |||||||||||| |||||||||||||||||| |||| || | ||||||||||||||||||| | |||||||  ||| ||||||||||| ||||||||||     
T  5322231 ctttgggggttcatttttcttcataatacaa-aatcctcctcatttgggggaactcaaaaactgtattggaaaagggttttggagggtttatatgaatta 5322133  T
Q  291 ttcaaattcaatctatgttgtt 312  Q
    |||||||| || | ||||||||    
T  5322132 ttcaaatttaagcaatgttgtt 5322111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 234 - 314
Target Start/End: Original strand, 14385101 - 14385181
Alignment:
Q  234 tttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||||||||||||||||||||||| |||||||||| || ||||| |||||||||| ||||||||| |||||    
T  14385101 tttgggggaactcaaaaattatattggaggaggaatttggagggtttacatgaaatcttcaaatttaatctatgtagttat 14385181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 13767439 - 13767519
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||| ||||||| |||||| |||||||||||| |||| |||||||||| ||||||||||||||||||||||||    
T  13767439 atttgggggaactaaaaaattgtattgg-ggaggattttggcgggtttatatgaatttttcaaattcaatctatgttgttat 13767519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 235 - 298
Target Start/End: Original strand, 15803200 - 15803263
Alignment:
Q  235 ttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaatt 298  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  15803200 ttgggggaactaaaaaattgtattggaggaggattttggagggtttatatgaattcttcaaatt 15803263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 234 - 314
Target Start/End: Original strand, 31082826 - 31082906
Alignment:
Q  234 tttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||| ||| ||| |||||||||||| |||||| |||| ||||||||||||||||||| ||| |||||||||||    
T  31082826 tttgggggaactaaaatattgtattggaggagggttttggggggtttatatgaattcttcaaatttaatttatgttgttat 31082906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 1364816 - 1364924
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| || | || | |||||| |||||| ||||||| |||||||||||| |||||| ||||  ||| |||||||||||||| ||| |    
T  1364816 ttttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggttaataagaattcttcaaatttaattt 1364914  T
Q  305 atgttgttat 314  Q
    ||||||||||    
T  1364915 atgttgttat 1364924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 31899416 - 31899336
Alignment:
Q  231 taatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||||| |||||| |||   || |||||||| |||||||||| |||||||||||||||| |||||||    
T  31899416 taatttgggggaactcaaaaattgtattggggga---ttatggagggtttatatgaatttttcaaattcaatctatattgttat 31899336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 210 - 314
Target Start/End: Complemental strand, 6128936 - 6128834
Alignment:
Q  210 ttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgtt 309  Q
    |||| ||||||| |||||| | |||| | ||||||||||||||| ||||||| ||  |||||||||||| |||||||||| |||||||| ||||||||||    
T  6128936 ttcacaatacaaaaatcttttcaatt-gagggaactcaaaaattgtattggaagaaaattttggagggt-tatatgaatttttcaaatttaatctatgtt 6128839  T
Q  310 gttat 314  Q
    |||||    
T  6128838 gttat 6128834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 15555458 - 15555335
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggag-gaggattttggagggtctatatgaatt 289  Q
    |||||||||||  |||||||||||||||||| |  ||||| | ||||| |||||| ||||||| |||||||| |||| |||| ||||||  ||| |||||    
T  15555458 ctttgggggttaatttttcttcataatacaaaacccttctca-tttggaggaactaaaaaattgtattggagtgagggtttttgagggttaataagaatt 15555360  T
Q  290 cttcaaattcaatctatgttgttat 314  Q
    ||||||||| ||| |||||||||||    
T  15555359 cttcaaatttaatttatgttgttat 15555335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 238 - 298
Target Start/End: Original strand, 39913270 - 39913330
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaatt 298  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||| || |||||    
T  39913270 ggggaactcaaaaattatattggaggaggattttggagggtttacatgaattttttaaatt 39913330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 28539455 - 28539406
Alignment:
Q  265 ggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||| ||||||||||||||||||| |||||||||||||||    
T  28539455 ggattttggagggtttatatgaattcttcaaatttaatctatgttgttat 28539406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 30312476 - 30312395
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||| ||||||| ||||| |||||| |||||| |||| ||||||| || ||||||| ||||||||||| ||||    
T  30312476 atttgggggaactaaaaaattgtattgaaggagggttttggggggtttatatgattttttcaaatccaatctatgttattat 30312395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 169 - 270
Target Start/End: Original strand, 36030760 - 36030860
Alignment:
Q  169 agaggactttgaggggaaaggactttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggat 268  Q
    ||||||| |||||  || ||| |||||||||||| |||||||||| ||||||| | ||| || | |||||||||||||||||||| || |||||||||||    
T  36030760 agaggaccttgagaagagagggctttgggggttcatttttcttcagaatacaaaattctcctca-tttgggggaactcaaaaattgtaatggaggaggat 36030858  T
Q  269 tt 270  Q
    ||    
T  36030859 tt 36030860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 43190637 - 43190529
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| | ||| | | |||||| |||| ||||||||| ||||| |||||| ||| || | || | ||||||||||||||||| |||||    
T  43190637 ttttcttcataatacaaaactct-catcatttggaggaaatcaaaaattgtattgaaggagggtttgggggagtttgtatgaattcttcaaatttaatct 43190539  T
Q  305 atgttgttat 314  Q
    ||||||||||    
T  43190538 atgttgttat 43190529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 238 - 314
Target Start/End: Complemental strand, 41100171 - 41100095
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||||||| |||||||||||||||||||| ||| ||||||||||  | ||||| |||||||||| ||||    
T  41100171 ggggaactaaaaaattgtattggaggaggattttggatggtttatatgaatttcttaaatttaatctatgttattat 41100095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 16813653 - 16813724
Alignment:
Q  242 aactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgtta 313  Q
    |||| ||||||| |||||||||||  ||||||||||| ||||| ||||||| ||||| ||||||||||||||    
T  16813653 aactaaaaaattgtattggaggagagttttggagggtttatataaattctttaaatttaatctatgttgtta 16813724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 242 - 313
Target Start/End: Original strand, 16852932 - 16853003
Alignment:
Q  242 aactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgtta 313  Q
    |||| ||||||| |||||||||||  ||||||||||| ||||| ||||||| ||||| ||||||||||||||    
T  16852932 aactaaaaaattgtattggaggagagttttggagggtttatataaattctttaaatttaatctatgttgtta 16853003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 192 - 314
Target Start/End: Original strand, 1408845 - 1408966
Alignment:
Q  192 tttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattct 291  Q
    ||||||||||| ||||||||||||| |||| | || || |  |||||| ||||| |||||||| ||||||||| | |||| |||||| | | ||||||||    
T  1408845 tttgggggttcatttttcttcataacacaa-attcctcctcgtttgggtgaactaaaaaattacattggaggatggttttcgagggtttgtgtgaattct 1408943  T
Q  292 tcaaattcaatctatgttgttat 314  Q
    | ||||| | |||||||||||||    
T  1408944 ttaaatttattctatgttgttat 1408966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 487 - 561
Target Start/End: Complemental strand, 18731652 - 18731578
Alignment:
Q  487 aacaatcattaataattgacacaaaatctgagacgacaagtgtacaaccatagatattgtctaccaccacctttg 561  Q
    ||||||||||||||| ||||| ||||||  | ||| | | |||||||||||| ||||||||||||||||||||||    
T  18731652 aacaatcattaataactgacataaaatcaaaaacgtcgaatgtacaaccataaatattgtctaccaccacctttg 18731578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 199 - 308
Target Start/End: Original strand, 25292157 - 25292264
Alignment:
Q  199 gttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaatt 298  Q
    |||| |||||||| ||||||||| |||| || | || ||||| || |||||||||||||||||| ||||||| ||| ||| |||||||||| ||||||||    
T  25292157 gttcatttttctt-ataatacaa-aatcctcctcatatggggaaattcaaaaattatattggagtaggatttcggaaggtttatatgaatttttcaaatt 25292254  T
Q  299 caatctatgt 308  Q
     |||| ||||    
T  25292255 taatcaatgt 25292264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 35550187 - 35550138
Alignment:
Q  265 ggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||||||    
T  35550187 ggattttggagggtttatatgaattcttcaaatttaatctacgttgttat 35550138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 38216606 - 38216497
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    |||||||||||| ||||||  |  |||||  || || |||| ||||||||||  | |||||||||||||||||| || || | |||||||||||||||||    
T  38216606 ttttcttcataacacaagatcccccttaaaatgaggaaactaaaaaattataaagaaggaggattttggagggtttagataatttcttcaaattcaatct 38216507  T
Q  305 atgttgttat 314  Q
    ||||| ||||    
T  38216506 atgtttttat 38216497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 314
Target Start/End: Complemental strand, 7786546 - 7786470
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||   |||||||||| ||||  ||||| || || |||||||||| ||||||||||||||||||||||||    
T  7786546 ggggaactcagtcattatattgggggagatttttgcagagtttatatgaatttttcaaattcaatctatgttgttat 7786470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 242 - 298
Target Start/End: Original strand, 33206815 - 33206871
Alignment:
Q  242 aactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaatt 298  Q
    |||||||||||||||||||||||||||||||||| |  || ||||||||| ||||||    
T  33206815 aactcaaaaattatattggaggaggattttggagagcttacatgaattctacaaatt 33206871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 4003401 - 4003471
Alignment:
Q  195 gggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggagg 266  Q
    |||||||  |||||||||||||||||| | ||| || | |||||||||||||||||||| ||||||||||||    
T  4003401 gggggttaatttttcttcataatacaaaactctcctca-tttgggggaactcaaaaattgtattggaggagg 4003471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 4042022 - 4042065
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  4042022 tggagggtttatatgaatttttcaaattcaatctatgttgttat 4042065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 13765962 - 13765919
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  13765962 tggagggtttatatgaatttttcaaattcaatctatgttgttat 13765919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 371
Target Start/End: Complemental strand, 18731869 - 18731826
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtaga 371  Q
    |||||| ||||||||||||||||||||||||| |||||||||||    
T  18731869 ttacaaaagaaaacttaatgcatttcatttaatataagagtaga 18731826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 25960633 - 25960590
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  25960633 tggagggtttatatgaatttttcaaattcaatctatgttgttat 25960590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 36567301 - 36567258
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  36567301 tggagggtttatatgaatttttcaaattcaatctatgttgttat 36567258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 3039017 - 3038927
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg---------agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||| ||||| ||||||         ||||| ||||| |||| ||||||||||||||||||||||||    
T  3039017 atttgggggaactcaaaaattgtattgggggaggtttttgggagttatggagggtttatatcaatttttcaaattcaatctatgttgttat 3038927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 233 - 312
Target Start/End: Original strand, 10165425 - 10165512
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg--------agggtctatatgaattcttcaaattcaatctatgttgtt 312  Q
    ||||||||||||| ||||||| |||||| ||||| ||||||        ||||| |||||||||| ||||||||||||||||||||||    
T  10165425 atttgggggaactaaaaaattgtattgggggagggttttggggttatggagggtttatatgaatttttcaaattcaatctatgttgtt 10165512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 314
Target Start/End: Complemental strand, 16625826 - 16625784
Alignment:
Q  272 ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| ||||||||||||||||||| |||||||||||||||    
T  16625826 ggagggtttatatgaattcttcaaatttaatctatgttgttat 16625784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 34757661 - 34757707
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||  |||||||||||||||||||||||| ||||||||||    
T  34757661 ttttggagggcttatatgaattcttcaaattcaatcaatgttgttat 34757707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 39205072 - 39205118
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  39205072 ttttggagggtttatatgaattcttgaaatttaatctatgttgttat 39205118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 271 - 313
Target Start/End: Original strand, 43334865 - 43334907
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgtta 313  Q
    |||||||| |||||||||| |||||||||||||||||||||||    
T  43334865 tggagggtttatatgaatttttcaaattcaatctatgttgtta 43334907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 3119873 - 3119832
Alignment:
Q  273 gagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| |||||||||| ||||||||||||||||||||||||    
T  3119873 gagggtttatatgaatttttcaaattcaatctatgttgttat 3119832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 205 - 311
Target Start/End: Original strand, 6656101 - 6656208
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaa--aattatattggaggaggattttggagggtctatatgaattcttcaaattcaat 302  Q
    ||||||||||||||||| || | || | |||||| |||||| |||  |||| |||||||||||| |||||| ||||  ||| |||||||||||||| |||    
T  6656101 ttttcttcataatacaa-aaccctcctcatttggaggaactaaaacaaattgtattggaggagggttttggggggttaataagaattcttcaaatttaat 6656199  T
Q  303 ctatgttgt 311  Q
     ||||||||    
T  6656200 ttatgttgt 6656208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 8991034 - 8990943
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggatttt----------ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||| ||||| ||||          ||||||| |||||||||  ||||||||||||||||||||||||    
T  8991034 atttgggggaactcaaaaattgtattgggggagggtttttgggggttatggagggtttatatgaatatttcaaattcaatctatgttgttat 8990943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 18826297 - 18826206
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg----------agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||| ||||| ||||||          ||||| |||||||||| |||||||||||| |||||||||||    
T  18826297 atttgggggaactcaaaaattgtattgggggagggttttggggggttatggagggtttatatgaatttttcaaattcaatttatgttgttat 18826206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 21626174 - 21626226
Alignment:
Q  262 ggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| |||||||||||  ||| |||||||||||||| |||||||||||||||    
T  21626174 ggagggttttggagggttaataagaattcttcaaatttaatctatgttgttat 21626226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 30523230 - 30523296
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    ||||||||||||||||| |  ||||| ||||||||| |||| ||||||| |||||||||||||||||||    
T  30523230 ttttcttcataatacaaaatccttct-aatttgggg-aactaaaaaattgtattggaggaggattttgg 30523296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 311
Target Start/End: Complemental strand, 31550320 - 31550245
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgt 311  Q
    |||| |||||||||||||||| |||||| ||    || |||||||| |||||||||| ||||||| |||||||||||||    
T  31550320 atttaggggaactcaaaaattgtattgggggg---ttatggagggtttatatgaatttttcaaatccaatctatgttgt 31550245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 236 - 314
Target Start/End: Original strand, 1725923 - 1726010
Alignment:
Q  236 tgggggaactcaaaaattatattggaggaggattttgg---------agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||||||| |||||| ||||| ||||||         ||||| |||||||||| |||||||||||||||| |||||||    
T  1725923 tgggggaactcaaaaattgtattgggggagggttttgggggttatagagggtttatatgaatttttcaaattcaatctatattgttat 1726010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 8410953 - 8410910
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||| ||| |||||||||| ||||||||||||||||||||||||    
T  8410953 tggaaggtttatatgaatttttcaaattcaatctatgttgttat 8410910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 14008352 - 14008309
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||||||| || ||||||||||||||||||||||||    
T  14008352 tggagggtttatatgattttttcaaattcaatctatgttgttat 14008309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 18780442 - 18780485
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| | |||||||||| ||||||||||||||||||||||||    
T  18780442 tggaggatttatatgaatttttcaaattcaatctatgttgttat 18780485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 38293946 - 38293989
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| | ||||||||||||||||||||||    
T  38293946 tggagggtttatatgaattttccaaattcaatctatgttgttat 38293989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 44137193 - 44137236
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||    
T  44137193 tggagggtttatatgaatttttcaaattcaatctatgttcttat 44137236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 314
Target Start/End: Complemental strand, 11522202 - 11522160
Alignment:
Q  272 ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||    
T  11522202 ggagggtttatatgaattcttcaaatttaatatatgttgttat 11522160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 195 - 273
Target Start/End: Complemental strand, 26599357 - 26599280
Alignment:
Q  195 gggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    |||||||| ||||||||||||||||||    || || | |||||||||||||| ||||| |||||||||||| ||||||    
T  26599357 gggggttcatttttcttcataatacaattccctcctca-tttgggggaactcacaaattgtattggaggagggttttgg 26599280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 1802086 - 1802045
Alignment:
Q  273 gagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| ||||||||||| | |||||||||||||||||||||    
T  1802086 gagggtttatatgaattccttaaattcaatctatgttgttat 1802045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 8555797 - 8555756
Alignment:
Q  273 gagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| |||||||||| |||||||||||||||| |||||||    
T  8555797 gagggtttatatgaatttttcaaattcaatctatattgttat 8555756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 187 - 276
Target Start/End: Complemental strand, 11373875 - 11373787
Alignment:
Q  187 aggactttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagg 276  Q
    ||||||| || ||||| |||||||||||||||| | ||||  | | ||||||||||||| ||||| |  |||||||||||||||| ||||    
T  11373875 aggacttaggtggttcatttttcttcataatacca-aatccccctgatttgggggaactaaaaaagtgcattggaggaggattttagagg 11373787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 11515027 - 11515099
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    ||||||||||||||||| || | || | |||||| |||||| ||||||| |||||||||||| |||||| ||||    
T  11515027 ttttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggt 11515099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 361 - 434
Target Start/End: Complemental strand, 18731804 - 18731731
Alignment:
Q  361 ataagagtagagatgcaagatggaattcaaatgaaaatacataaatcggcatgacatgaatctaccatagctaa 434  Q
    ||||||||||||||  |  ||||| |||||||||||||||| |||   |||||||||| | |||||||||||||    
T  18731804 ataagagtagagataaacaatggatttcaaatgaaaatacagaaacaagcatgacatggagctaccatagctaa 18731731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 268 - 308
Target Start/End: Original strand, 567441 - 567481
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgt 308  Q
    ||||||||||| || |||||||||||||||| |||||||||    
T  567441 ttttggagggtttacatgaattcttcaaatttaatctatgt 567481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 298
Target Start/End: Complemental strand, 1270730 - 1270698
Alignment:
Q  266 gattttggagggtctatatgaattcttcaaatt 298  Q
    ||||||||||||| |||||||||||||||||||    
T  1270730 gattttggagggtttatatgaattcttcaaatt 1270698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 242 - 314
Target Start/End: Complemental strand, 3039342 - 3039271
Alignment:
Q  242 aactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||| |||||||  |||||| |||| ||||| ||||| |||||||||| || ||||||||||||| |||||||    
T  3039342 aactaaaaaattgcattggaagagg-ttttgaagggtttatatgaattatttaaattcaatctatattgttat 3039271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 240 - 302
Target Start/End: Original strand, 8757386 - 8757445
Alignment:
Q  240 ggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaat 302  Q
    |||||||||||||||||||   ||| ||||||||| ||| |||||||||| |||| |||||||    
T  8757386 ggaactcaaaaattatatt---ggaagattttggaaggtttatatgaattattcacattcaat 8757445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 386
Target Start/End: Complemental strand, 11616766 - 11616718
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||| ||||||||||| ||||||| ||||||||| |||||| ||||    
T  11616766 aaacttattgcatttcattcaaaataatagtagagatacaagatagaat 11616718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 23769769 - 23769829
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaattc 388  Q
    ||||||||  ||||||| ||||||||||| | ||||| ||||||||| |||||| ||||||    
T  23769769 ttacaagaacaaacttattgcatttcattcataataatagtagagatacaagatagaattc 23769829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 31584832 - 31584792
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    |||||||| ||||||||||||| ||||||||||||| ||||    
T  31584832 ggggaactaaaaaattatattgaaggaggattttggggggt 31584792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 32243485 - 32243525
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    ||||||||||||||||||||| |||||| ||||| ||||||    
T  32243485 atttgggggaactcaaaaattgtattgggggagggttttgg 32243525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 314
Target Start/End: Complemental strand, 35412249 - 35412201
Alignment:
Q  266 gattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||| || ||||||||||||||||||| ||| | |||||||||    
T  35412249 gattttggagagtttatatgaattcttcaaatttaatatgtgttgttat 35412201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 2e-23; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 26713878 - 26713954
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||| | |||||||||||||    
T  26713878 ggggaactcaaaaattgtattggaggagggttttggagggtttatatgaattcttcaaatttattctatgttgttat 26713954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 32719488 - 32719366
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattc 290  Q
    |||||||||||   ||||||||||||||||| || | || | |||||| |||||| ||||||| |||||||||||| |||||||||||  ||| ||||||    
T  32719488 ctttgggggttaacttttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggagggttaataagaattc 32719390  T
Q  291 ttcaaattcaatctatgttgttat 314  Q
    |||||||| ||| |||||||||||    
T  32719389 ttcaaatttaatttatgttgttat 32719366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 191 - 314
Target Start/End: Original strand, 13380509 - 13380632
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggg-gaactcaaaaattatattggaggaggattttggagggtctatatgaatt 289  Q
    ||||||| |||| ||||||||||||||| || |||| || | |||||||| ||||||||||||| ||||||| |||| |||||||| || || || ||||    
T  13380509 ctttgggagttcatttttcttcataatataa-aatcatcctcatttggggggaactcaaaaattgtattggaagagggttttggagcgtttacataaatt 13380607  T
Q  290 cttcaaattcaatctatgttgttat 314  Q
    ||||||||| ||||||||| |||||    
T  13380608 cttcaaatttaatctatgtagttat 13380632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 233 - 314
Target Start/End: Original strand, 33755059 - 33755140
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||| || |||| ||||||||||||  ||||| |||| |||||||||| |||||| | |||||||||||||||    
T  33755059 atttggggaaactaaacaattgtattggaggagggctttggggggtttatatgaattattcaaaattaatctatgttgttat 33755140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 234 - 314
Target Start/End: Complemental strand, 20820600 - 20820520
Alignment:
Q  234 tttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||| ||||||| ||||||| |||  |||| |||| | |||||||||| |||||||| ||| |||||||||||    
T  20820600 tttgggggaactaaaaaattgtattggatgagagttttagaggatttatatgaatttttcaaatttaatatatgttgttat 20820520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 1029351 - 1029394
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  1029351 tggagggtttatatgaatttttcaaattcaatctatgttgttat 1029394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 24734938 - 24734981
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  24734938 tggagggtttatatgaatttttcaaattcaatctatgttgttat 24734981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 5825384 - 5825433
Alignment:
Q  265 ggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| |||||||| |||||||||| || |||||||||||||||||||||    
T  5825384 ggattatggagggtttatatgaatttttgaaattcaatctatgttgttat 5825433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 265 - 310
Target Start/End: Original strand, 32222054 - 32222099
Alignment:
Q  265 ggattttggagggtctatatgaattcttcaaattcaatctatgttg 310  Q
    |||||||||||||| ||||||||||||||||||| || ||||||||    
T  32222054 ggattttggagggtttatatgaattcttcaaatttaaactatgttg 32222099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 34557227 - 34557158
Alignment:
Q  239 gggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgt 308  Q
    ||||||||||||||| | ||||||||| |||||| || || || |||||||||||||||| |||| ||||    
T  34557227 gggaactcaaaaattgttttggaggagaattttgaagcgtttacatgaattcttcaaatttaatcaatgt 34557158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 12779566 - 12779614
Alignment:
Q  266 gattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||  ||| |||||||||||||| |||||||||||||||    
T  12779566 gattttggagggttaataagaattcttcaaatttaatctatgttgttat 12779614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 265 - 309
Target Start/End: Original strand, 15615719 - 15615763
Alignment:
Q  265 ggattttggagggtctatatgaattcttcaaattcaatctatgtt 309  Q
    |||||||||||||| ||||||||||||||||||| ||||| ||||    
T  15615719 ggattttggagggtttatatgaattcttcaaatttaatctttgtt 15615763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 26574466 - 26574375
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtc----------tatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||| ||||| |||||| ||||           |||||||||| ||||||||||||||||||||||||    
T  26574466 atttgggggaactcaaaaattgtattgggggagggttttggggggttatggatggtttatatgaatttttcaaattcaatctatgttgttat 26574375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 4909938 - 4909895
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||    
T  4909938 tggagggtttatatcaatttttcaaattcaatctatgttgttat 4909895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 283 - 314
Target Start/End: Complemental strand, 13120433 - 13120402
Alignment:
Q  283 atgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||||||||||||||    
T  13120433 atgaattcttcaaattcaatctatgttgttat 13120402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 23095151 - 23095108
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| || |||||||||| ||||||||||||||||||||||||    
T  23095151 tggagagtttatatgaatttttcaaattcaatctatgttgttat 23095108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 26481154 - 26481111
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||| ||||||||    
T  26481154 tggagggtttatatgaatttttcaaattcaatctacgttgttat 26481111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 34914685 - 34914728
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| |||||||||||| |||||||||||    
T  34914685 tggagggtttatatgaatttttcaaattcaatttatgttgttat 34914728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 196 - 278
Target Start/End: Original strand, 463044 - 463125
Alignment:
Q  196 ggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    |||||| | ||||||||||||||||| ||||  | ||||  |||||||||||||||||  ||| |||||||||||| ||||||    
T  463044 ggggtttggttttcttcataatacaa-aatccccctaatgcgggggaactcaaaaattgcattagaggaggattttagagggt 463125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 280 - 314
Target Start/End: Original strand, 19477323 - 19477357
Alignment:
Q  280 tatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||| |||||||||||||||    
T  19477323 tatatgaattcttcaaatttaatctatgttgttat 19477357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 25072557 - 25072511
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||| |||| |||||||||||||| |||||||||| ||||    
T  25072557 ttttggagggtttatacgaattcttcaaatttaatctatgttattat 25072511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 280 - 314
Target Start/End: Original strand, 26289618 - 26289652
Alignment:
Q  280 tatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||| |||||||||||||||    
T  26289618 tatatgaattcttcaaatttaatctatgttgttat 26289652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Complemental strand, 33590355 - 33590309
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||  |||||||||||||||||| |||||||||| ||||    
T  33590355 ttttggagggttaatatgaattcttcaaatttaatctatgttattat 33590309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 296
Target Start/End: Complemental strand, 4027083 - 4027026
Alignment:
Q  239 gggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaa 296  Q
    ||||||| ||||||||||| |||||||| |||| |||| | |||||||||| ||||||    
T  4027083 gggaactaaaaaattatatcggaggagggtttttgaggatttatatgaatttttcaaa 4027026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 292
Target Start/End: Complemental strand, 6688101 - 6688048
Alignment:
Q  239 gggaactcaaaaattatattggaggaggattttggagggtctatatgaattctt 292  Q
    ||||||| ||||||| |||||||||||  |||||| |||| |||||||||||||    
T  6688101 gggaactaaaaaattgtattggaggagagttttggggggtttatatgaattctt 6688048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 20381926 - 20381846
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||| | ||||||| |||| | | ||| ||||| ||||| |||||||||||||||| || ||| |||||||||||    
T  20381926 atttgggggaattaaaaaattgtattcgtgaagg-ttttgaagggtttatatgaattcttcaattttaatatatgttgttat 20381846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 265 - 314
Target Start/End: Complemental strand, 31345400 - 31345351
Alignment:
Q  265 ggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| ||||| || |||||||||| |||||||| |||||||||||||||    
T  31345400 ggattatggagagtttatatgaatttttcaaatttaatctatgttgttat 31345351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 386
Target Start/End: Complemental strand, 32957573 - 32957525
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    |||||||  |||||||||| ||||||| ||||||||| |||||||||||    
T  32957573 aaacttatcgcatttcattcaaaataatagtagagatacaagatggaat 32957525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 192 - 308
Target Start/End: Complemental strand, 1133036 - 1132921
Alignment:
Q  192 tttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattct 291  Q
    ||||||||||| |||| ||||||||||||| | ||| || | ||||||| |||||||||||| |||||||||||| ||||||||||| || |||||||||    
T  1133036 tttgggggttcattttacttcataatacaaaactctcctcattttgggg-aactcaaaaattgtattggaggagggttttggagggtttacatgaattct 1132938  T
Q  292 tcaaattcaatctatgt 308  Q
    | ||||| |||||||||    
T  1132937 ttaaatttaatctatgt 1132921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 34306623 - 34306699
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||||| |||||| ||||| ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  34306623 ggggaactcaaaaattgtattgggggagggttttggagggtttatatgaatttttcaaattcaatctatgttgttat 34306699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 204 - 314
Target Start/End: Complemental strand, 24588382 - 24588273
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatc 303  Q
    |||||||||||||||||| ||||  | | |||||| |||||||||||||| |||||| ||| | ||||||||||| || ||||||||||||||||| |||    
T  24588382 tttttcttcataatacaa-aatccccctcatttggaggaactcaaaaattgtattgggggatggttttggagggtttaaatgaattcttcaaattccatc 24588284  T
Q  304 tatgttgttat 314  Q
    |||||||||||    
T  24588283 tatgttgttat 24588273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 205 - 314
Target Start/End: Original strand, 38639572 - 38639680
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| || | || | |||||| |||||| ||||||| |||||||||||| |||||||||||  ||| |||||||||||||| ||| |    
T  38639572 ttttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggagggttaataagaattcttcaaatttaattt 38639670  T
Q  305 atgttgttat 314  Q
    ||||||||||    
T  38639671 atgttgttat 38639680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 314
Target Start/End: Original strand, 49183713 - 49183786
Alignment:
Q  241 gaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| ||||||| |||| ||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  49183713 gaactaaaaaattgtattagaggagggttttggagggtttatatgaattcttcaaatttaatctatgttgttat 49183786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 2420685 - 2420760
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||||| |||||| ||||  ||||||||||| |||||||||| ||||||||||||||||||||||||    
T  2420685 ggggaactcaaaaattgtattgg-ggagagttttggagggtttatatgaatttttcaaattcaatctatgttgttat 2420760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 333 - 420
Target Start/End: Complemental strand, 27764364 - 27764279
Alignment:
Q  333 agagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaattcaaatgaaaatacataaatcggcatgacatgaa 420  Q
    |||||||| |||||||||||||||||||||  |||| ||||| ||||||||||||||||| ||||||||||||   ||||||||||||    
T  27764364 agagaaaatttaatgcatttcatttaaaat--gagttgagatacaagatggaattcaaataaaaatacataaactagcatgacatgaa 27764279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 231 - 314
Target Start/End: Complemental strand, 39115025 - 39114944
Alignment:
Q  231 taatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| ||||||||||||  || ||||||||||||| ||| |||||| |||||||||||||||||||||||||||||| ||||    
T  39115025 taattttggggaactcaaa--ttgtattggaggaggactttagagggtttatatgaattcttcaaattcaatctatgttattat 39114944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 247 - 314
Target Start/End: Original strand, 47359343 - 47359410
Alignment:
Q  247 aaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| || ||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  47359343 aaaaattgtagtggaggagggttttggagggtttatatgaattcttcaaatttaatctatgttgttat 47359410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 15499406 - 15499325
Alignment:
Q  196 ggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    |||||||  ||||||||||||||||| ||||||| | ||||||| ||||||||||||| |||||||||| |||||||||||||    
T  15499406 ggggttcacttttcttcataatacaa-aatcttcctcatttgggagaactcaaaaattgtattggaggatgattttggagggt 15499325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 25754200 - 25754092
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| || | || | |||||| |||||| ||||||| ||||||||||||||||||| ||||  ||| ||||||||| |||| ||| |    
T  25754200 ttttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattgtattggaggaggattttggggggttaataagaattcttcgaatttaattt 25754102  T
Q  305 atgttgttat 314  Q
    ||||||||||    
T  25754101 atgttgttat 25754092  T

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Target: chr3; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 52620896 - 52620815
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| ||||||||||||| |||||||||||| |||||  ||||  |||||||||||||||||| ||| |||||||||||    
T  52620896 atttgggagaactcaaaaattgtattggaggagggttttgaggggttaatatgaattcttcaaatttaatatatgttgttat 52620815  T

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Target: chr3; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 53664697 - 53664589
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatct 304  Q
    ||||||||||||||||| || | || | |||||| |||||| ||||||| |||||||||||| |||| ||||||  ||| |||||||||||||| ||| |    
T  53664697 ttttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattgtattggaggagggttttcgagggttaataagaattcttcaaatttaattt 53664599  T
Q  305 atgttgttat 314  Q
    ||||||||||    
T  53664598 atgttgttat 53664589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 191 - 314
Target Start/End: Original strand, 44400678 - 44400800
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattc 290  Q
    |||||||||||   |||||||||| |||||| || | |||| ||||||  ||||| ||||||| |||||||||||| ||||| |||||  ||| |||||     
T  44400678 ctttgggggttaacttttcttcatgatacaa-aaccctcttcatttggacgaactaaaaaattgtattggaggagggttttgtagggttaataagaattt 44400776  T
Q  291 ttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||||||||    
T  44400777 ttcaaatttaatctatgttgttat 44400800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 182 - 278
Target Start/End: Original strand, 32858791 - 32858885
Alignment:
Q  182 gggaaaggactttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    |||||||| |||||||||||| ||||||||||||||| || |||| || | ||||||||||||||||||||| |||| ||||||  |||||| ||||    
T  32858791 gggaaagg-ctttgggggttcatttttcttcataatataa-aatcctcctcatttgggggaactcaaaaattgtattcgaggagagttttggggggt 32858885  T

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Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 48908986 - 48908900
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    |||||||||||   ||||||||||||||||| || | || |||||||| |||||| |||||||||||||||||||| |||||| ||||    
T  48908986 ctttgggggttaacttttcttcataatacaa-aaccctcataatttggaggaactaaaaaattatattggaggagggttttggggggt 48908900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 204 - 274
Target Start/End: Complemental strand, 11040927 - 11040858
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttgga 274  Q
    ||||||| |||||||||| ||||| | | ||||||||||||||||||||| |||||||||| |||||||||    
T  11040927 tttttctccataatacaa-aatctcccttatttgggggaactcaaaaattgtattggaggatgattttgga 11040858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 238 - 314
Target Start/End: Complemental strand, 48370246 - 48370169
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggatttt-ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||||||||| ||| |||| |||||||| ||||| | |||||||||| |||||||| ||| |||||||||||    
T  48370246 ggggaactcaaaaattgtatcggagaaggattttgggaggatttatatgaatttttcaaatttaatttatgttgttat 48370169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 233 - 297
Target Start/End: Complemental strand, 50535173 - 50535108
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggatttt-ggagggtctatatgaattcttcaaat 297  Q
    |||| |||||||| ||||||| |||||||| |||||||| ||||||| ||||||||||||||||||    
T  50535173 atttaggggaactaaaaaattgtattggagaaggatttttggagggtttatatgaattcttcaaat 50535108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 336 - 463
Target Start/End: Complemental strand, 7515129 - 7515009
Alignment:
Q  336 gaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaattcaaatgaaaatacataaatcggcatgacatgaatctaccatagctaaa 435  Q
    |||| ||||||||||||||||||||||||||||||| ||  ||||   ||||||||| || ||||| ||| | ||||||| || | ||| | ||||||||    
T  7515129 gaaaccttaatgcatttcatttaaaataagagtagatatataaga---aattcaaataaatatacacaaaccagcatgacgtggagctagcctagctaaa 7515033  T
Q  436 ctatatatgagcaacttcattgacttgt 463  Q
    |    |||||||||||||| ||||||||    
T  7515032 c----tatgagcaacttcagtgacttgt 7515009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 273
Target Start/End: Original strand, 21856036 - 21856103
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    ||||||||||||||||| ||||  ||||||||||||||||| |||| || ||||| |||||||||||||    
T  21856036 ttttcttcataatacaa-aatccccttaatttgggggaactaaaaatttgtattgaaggaggattttgg 21856103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 238 - 314
Target Start/End: Original strand, 35989131 - 35989207
Alignment:
Q  238 ggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||||||| |||| ||||||  ||||| ||| | ||||||||||||||||||| ||||||| |||||||    
T  35989131 ggggaactaaaaaattgtattagaggagagttttgaaggatttatatgaattcttcaaatttaatctatattgttat 35989207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 41962048 - 41961957
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg----------agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||| ||||| ||||||          ||||| |||||||||| ||||||||||||||||||||||||    
T  41962048 atttgggggaactcaaaaattgtattgggggagggttttggggggttatgaagggtttatatgaatttttcaaattcaatctatgttgttat 41961957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 310
Target Start/End: Complemental strand, 46312452 - 46312404
Alignment:
Q  262 ggaggattttggagggtctatatgaattcttcaaattcaatctatgttg 310  Q
    |||||||| |||||||| |||||||||| ||||||||||||||||||||    
T  46312452 ggaggattatggagggtttatatgaatttttcaaattcaatctatgttg 46312404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 47714705 - 47714653
Alignment:
Q  262 ggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| || |||||||| |||||||||| ||||||||||||||||||||||||    
T  47714705 ggagggttatggagggtttatatgaatttttcaaattcaatctatgttgttat 47714653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 54372608 - 54372556
Alignment:
Q  262 ggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| |||| |||||| ||||||||||||||||||||| |||||||||||||    
T  54372608 ggagggttttagagggtttatatgaattcttcaaattcagtctatgttgttat 54372556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 274
Target Start/End: Complemental strand, 21777748 - 21777666
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttgga 274  Q
    |||||||||||| |||||||||||||||||| | || || | ||||||| ||| ||||||||| |||||||||||  |||||||    
T  21777748 ctttgggggttcatttttcttcataatacaaaactc-tcatcatttgggagaaatcaaaaattgtattggaggagagttttgga 21777666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 27055927 - 27055884
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  27055927 tggagggtttatatgaatttttcaaattcaatctatgttgttat 27055884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 39499256 - 39499299
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  39499256 tggagggtttatatgaatttttcaaattcaatctatgttgttat 39499299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 310
Target Start/End: Complemental strand, 40118955 - 40118881
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttg 310  Q
    ||||||||||||| ||||||| |||||||||    ||||||||||| | ||||||||||||||||| | |||||||||    
T  40118955 atttgggggaactaaaaaattgtattggaggg---ttttggagggtttgtatgaattcttcaaatttattctatgttg 40118881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 47434343 - 47434300
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  47434343 tggagggtttatatgaatttttcaaattcaatctatgttgttat 47434300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 47789469 - 47789426
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  47789469 tggagggtttatatgaatttttcaaattcaatctatgttgttat 47789426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 204 - 314
Target Start/End: Original strand, 32708717 - 32708826
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatc 303  Q
    |||||||||||||||||| |||| || |||||| | |||| |||||| ||  ||  || |||||||||||| ||| |||||||||||||  ||||||||     
T  32708717 tttttcttcataatacaa-aatcctcataattttgaggaattcaaaatttggatcagatgaggattttggaaggtttatatgaattcttttaattcaatt 32708815  T
Q  304 tatgttgttat 314  Q
    ||| |||||||    
T  32708816 tatattgttat 32708826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 240 - 298
Target Start/End: Complemental strand, 33281770 - 33281712
Alignment:
Q  240 ggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaatt 298  Q
    |||||||||||||| ||||||| ||||||||||  |||| || ||||||||||||||||    
T  33281770 ggaactcaaaaattgtattggaagaggattttgaggggtttaaatgaattcttcaaatt 33281712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 272 - 314
Target Start/End: Complemental strand, 33982761 - 33982719
Alignment:
Q  272 ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| |||||||||| ||||||||||||||||||||||||    
T  33982761 ggagggtttatatgaatttttcaaattcaatctatgttgttat 33982719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 314
Target Start/End: Complemental strand, 24242163 - 24242072
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg----------agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||||| |||||| ||||| ||||||          ||||| |||||||||| |||| |||||||||||||||||||    
T  24242163 atttgggggaactcaaaaattgtattgggggagggttttggtgggttatggagggtttatatgaatttttcatattcaatctatgttgttat 24242072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 43007542 - 43007502
Alignment:
Q  274 agggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| |||||||||| ||||||||||||||||||||||||    
T  43007542 agggtttatatgaatttttcaaattcaatctatgttgttat 43007502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 45571051 - 45570976
Alignment:
Q  195 gggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggatttt 271  Q
    |||||||| |||||||||||||||  | || | || | ||||||||||||| ||||||| |||||||||||||||||    
T  45571051 gggggttcatttttcttcataatatta-aaccctcctcatttgggggaactaaaaaattgtattggaggaggatttt 45570976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 25428726 - 25428769
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||||| |||| ||||||||||||||||||||||||    
T  25428726 tggagggtttatataaatttttcaaattcaatctatgttgttat 25428769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 33944752 - 33944666
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    |||||||||||   ||||||||||||||||| || | || | |||||| |||||| ||||||| |||||||||||| |||||| ||||    
T  33944752 ctttgggggttaacttttcttcataatacaa-aaccctcctcatttggaggaactaaaaaattgtattggaggagggttttggggggt 33944666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 38593010 - 38593053
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| |||||||||||| |||||||||||    
T  38593010 tggagggtttatatgaatttttcaaattcaatatatgttgttat 38593053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 240 - 311
Target Start/End: Complemental strand, 42156017 - 42155947
Alignment:
Q  240 ggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgt 311  Q
    ||||||||||||||||||||| ||| | ||||  ||||| |||||||||| |||||||| ||| ||||||||    
T  42156017 ggaactcaaaaattatattgggggaaggtttt-aagggtttatatgaatttttcaaatttaatatatgttgt 42155947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 243 - 278
Target Start/End: Original strand, 42668071 - 42668106
Alignment:
Q  243 actcaaaaattatattggaggaggattttggagggt 278  Q
    ||||||||||| ||||||||||||||||||||||||    
T  42668071 actcaaaaattgtattggaggaggattttggagggt 42668106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 43237348 - 43237391
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||| ||||| ||||||||||||||||||||||||    
T  43237348 tggagggtttataagaatttttcaaattcaatctatgttgttat 43237391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 49860894 - 49860937
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| ||||||||||  |||||||||||||||||||||||    
T  49860894 tggagggtttatatgaatttatcaaattcaatctatgttgttat 49860937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 280 - 314
Target Start/End: Original strand, 16883412 - 16883446
Alignment:
Q  280 tatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||||||||| |||||||||||||||    
T  16883412 tatatgaattcttcaaatttaatctatgttgttat 16883446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 314
Target Start/End: Complemental strand, 23613235 - 23613149
Alignment:
Q  229 cttaatttgggggaactcaaaaattatattggag-gaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||| ||||||||||||| | |||||||  ||  |||||||||||| || || |||| ||||||| ||||||||||| ||||    
T  23613235 cttaatttgagggaactcaaaaaatgtattggaaagaatattttggagggtttagataaattattcaaatccaatctatgttattat 23613149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 272 - 314
Target Start/End: Original strand, 29623295 - 29623337
Alignment:
Q  272 ggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| ||||||||||||||||||| ||| |||||||||||    
T  29623295 ggagggtttatatgaattcttcaaatttaatatatgttgttat 29623337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 242 - 310
Target Start/End: Complemental strand, 42125610 - 42125545
Alignment:
Q  242 aactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttg 310  Q
    |||| ||||||| |||||||||||   |||||||||| ||||| |||||||| ||| ||||||||||||    
T  42125610 aactaaaaaattttattggaggag---tttggagggtttatataaattcttcgaatccaatctatgttg 42125545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 271 - 309
Target Start/End: Original strand, 45555691 - 45555729
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgtt 309  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  45555691 tggagggtttatatgaatttttcaaattcaatctatgtt 45555729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 280 - 314
Target Start/End: Original strand, 46017272 - 46017306
Alignment:
Q  280 tatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||||| ||||||||||||||||||||||||    
T  46017272 tatatgaatttttcaaattcaatctatgttgttat 46017306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 232 - 278
Target Start/End: Original strand, 49713640 - 49713686
Alignment:
Q  232 aatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    |||||||||||||| ||||| | ||||||||||||||||| ||||||    
T  49713640 aatttgggggaactaaaaaaatttattggaggaggattttagagggt 49713686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 51686561 - 51686607
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||| |||||||||| |||||||| ||| |||||||||||    
T  51686561 ttttggagggtttatatgaatttttcaaatttaatttatgttgttat 51686607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 314
Target Start/End: Complemental strand, 30131907 - 30131866
Alignment:
Q  273 gagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| |||||||||| |||||||||||||||| |||||||    
T  30131907 gagggtttatatgaatttttcaaattcaatctatcttgttat 30131866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 233 - 278
Target Start/End: Original strand, 36796433 - 36796478
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    ||||||||||||||||||||| |||||| ||||| |||||| ||||    
T  36796433 atttgggggaactcaaaaattgtattgggggaggcttttggggggt 36796478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 233 - 273
Target Start/End: Complemental strand, 3043189 - 3043149
Alignment:
Q  233 atttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    ||||||||||||||||||||| |||||| ||||| ||||||    
T  3043189 atttgggggaactcaaaaattgtattgggggagggttttgg 3043149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 3537191 - 3537250
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggag 265  Q
    ||||||||||||||||| || | || | ||||||||||||| ||||||| |||||||||||    
T  3537191 ttttcttcataatacaa-aaccctcctcatttgggggaactaaaaaattgtattggaggag 3537250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 205 - 273
Target Start/End: Complemental strand, 5939879 - 5939812
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    ||||||||||||||||| ||||||| | |||||| ||||||  |||| | |||||||||||| ||||||    
T  5939879 ttttcttcataatacaa-aatcttcctcatttggaggaactacaaaactgtattggaggagggttttgg 5939812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 262 - 314
Target Start/End: Original strand, 7661085 - 7661137
Alignment:
Q  262 ggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| || |||||| | |||||||||| |||||||||||| |||||||||||    
T  7661085 ggagggttatggaggatttatatgaatttttcaaattcaatatatgttgttat 7661137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 271 - 311
Target Start/End: Complemental strand, 30121545 - 30121505
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgt 311  Q
    ||||| || |||||||||| |||||||||||||||||||||    
T  30121545 tggagagtttatatgaatttttcaaattcaatctatgttgt 30121505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 214 - 266
Target Start/End: Complemental strand, 33145428 - 33145377
Alignment:
Q  214 taatacaagaatcttcttaatttgggggaactcaaaaattatattggaggagg 266  Q
    |||||||| |||| |||| |||||| ||||||||||||||||||| |||||||    
T  33145428 taatacaa-aatcctctttatttggaggaactcaaaaattatatttgaggagg 33145377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 262 - 314
Target Start/End: Complemental strand, 37674185 - 37674133
Alignment:
Q  262 ggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||| |||||||||||  ||| ||||| |||||||| |||||||||||||||    
T  37674185 ggagggttttggagggttaataagaatttttcaaatttaatctatgttgttat 37674133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 271 - 311
Target Start/End: Original strand, 38515295 - 38515335
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgt 311  Q
    |||||||| ||||| |||| |||||||||||||||||||||    
T  38515295 tggagggtttatataaatttttcaaattcaatctatgttgt 38515335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 231 - 299
Target Start/End: Complemental strand, 41677530 - 41677462
Alignment:
Q  231 taatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattc 299  Q
    ||||||||||||||||||||| | |||||  ||||| | ||||||||  || || ||||||||||||||    
T  41677530 taatttgggggaactcaaaaaatgtattgagggagggtcttggagggcttagataaattcttcaaattc 41677462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 306
Target Start/End: Complemental strand, 47076939 - 47076899
Alignment:
Q  266 gattttggagggtctatatgaattcttcaaattcaatctat 306  Q
    ||||||||||||| ||||| |||| ||||||||||||||||    
T  47076939 gattttggagggtttatattaattattcaaattcaatctat 47076899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 386
Target Start/End: Complemental strand, 51952071 - 51952023
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||| ||||||||||| | ||||| ||||||||| |||||||||||    
T  51952071 aaacttattgcatttcattcataataatagtagagatacaagatggaat 51952023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 234 - 278
Target Start/End: Original strand, 53888498 - 53888542
Alignment:
Q  234 tttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    |||||||||||| ||||||| |||||||||||| |||||| ||||    
T  53888498 tttgggggaactaaaaaattgtattggaggagggttttggggggt 53888542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 247 - 314
Target Start/End: Complemental strand, 12306 - 12239
Alignment:
Q  247 aaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| |||||||||||| ||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  12306 aaaaattgtattggaggaggtttttggatggtttatatgaattcttcaaatttaatctatgttgttat 12239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 247 - 314
Target Start/End: Complemental strand, 90932 - 90865
Alignment:
Q  247 aaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||| |||||||||||| ||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  90932 aaaaattgtattggaggagggttttggatggtttatatgaattcttcaaatttaatctatgttgttat 90865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 314
Target Start/End: Complemental strand, 19506 - 19397
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaa-ttatattggaggaggattttggagggtctatatgaattcttcaaattcaatc 303  Q
    |||| ||||||||| || ||||||| | ||| |||| |||||||||| || |||||||| |||||||||| |||| |||||||||||||| |||| ||||    
T  19506 tttttttcataataaaaaaatcttcctcattaggggaaactcaaaaagttgtattggagaaggattttggtgggtttatatgaattcttc-aattaaatc 19408  T
Q  304 tatgttgttat 314  Q
    |||||||||||    
T  19407 tatgttgttat 19397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 314
Target Start/End: Original strand, 37174 - 37222
Alignment:
Q  266 gattttggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    ||||||||||||| ||||||||||||||||||| ||| |||||||||||    
T  37174 gattttggagggtttatatgaattcttcaaatttaatatatgttgttat 37222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 266 - 298
Target Start/End: Original strand, 30507 - 30539
Alignment:
Q  266 gattttggagggtctatatgaattcttcaaatt 298  Q
    ||||||||||||| |||||||||||||||||||    
T  30507 gattttggagggtttatatgaattcttcaaatt 30539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 271 - 314
Target Start/End: Complemental strand, 35478 - 35435
Alignment:
Q  271 tggagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||||| |||||||||| ||||||||||||||||||||||||    
T  35478 tggagggtttatatgaatttttcaaattcaatctatgttgttat 35435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 6858 - 6800
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||||  ||||||| ||||||||||| ||||||| ||||||||| |||||||||||    
T  6858 ttacaagaataaacttattgcatttcattcaaaataatagtagagatacaagatggaat 6800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 386
Target Start/End: Complemental strand, 187271 - 187213
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaat 386  Q
    ||||||||  ||||||| ||||||||||| ||||||| ||||||||| |||||||||||    
T  187271 ttacaagaagaaacttattgcatttcattcaaaataatagtagagatacaagatggaat 187213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 314
Target Start/End: Complemental strand, 308 - 176
Alignment:
Q  191 ctttgggggttcgtttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggagga----------ggattttggagggtct 280  Q
    |||||||||||   ||||||||||||||||| |  || |||| ||||| |||||| ||||||| ||||||||||          || |||||||||||      
T  308 ctttgggggttaacttttcttcataatacaaaaccctcctta-tttggaggaactaaaaaattgtattggaggagggttttgcggggttttggagggtta 210  T
Q  281 atatgaattcttcaaattcaatctatgttgttat 314  Q
    ||| |||||||||||||| |||||||||||||||    
T  209 ataagaattcttcaaatttaatctatgttgttat 176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 241 - 275
Target Start/End: Complemental strand, 56599 - 56565
Alignment:
Q  241 gaactcaaaaattatattggaggaggattttggag 275  Q
    ||||| |||||||||||||||||||||||||||||    
T  56599 gaactaaaaaattatattggaggaggattttggag 56565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 1638 - 1679
Alignment:
Q  273 gagggtctatatgaattcttcaaattcaatctatgttgttat 314  Q
    |||||| |||||||||| ||||||| ||||||||||||||||    
T  1638 gagggtttatatgaatttttcaaatccaatctatgttgttat 1679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 265
Target Start/End: Original strand, 7497 - 7557
Alignment:
Q  204 tttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggag 265  Q
    |||||||||||||||||| ||||||| | |||||| |||||| ||||||| ||||| |||||    
T  7497 tttttcttcataatacaa-aatcttcgtcatttggaggaactaaaaaattgtattgaaggag 7557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 387
Target Start/End: Complemental strand, 5426 - 5377
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatggaatt 387  Q
    ||||||| ||||||||||| | ||||| ||||||||| ||||||||||||    
T  5426 aaacttattgcatttcattcataataatagtagagatacaagatggaatt 5377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 93604 - 93532
Alignment:
Q  205 ttttcttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggt 278  Q
    ||||||||||||||||| | ||| || | ||||| |||||| ||||||| |||||||||||| |||||| ||||    
T  93604 ttttcttcataatacaaaactctcctca-tttggaggaactaaaaaattgtattggaggagggttttggggggt 93532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 309
Target Start/End: Complemental strand, 82772 - 82731
Alignment:
Q  268 ttttggagggtctatatgaattcttcaaattcaatctatgtt 309  Q
    ||||| ||||| |||||||||||||||||||||| |||||||    
T  82772 ttttgaagggtttatatgaattcttcaaattcaacctatgtt 82731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 273
Target Start/End: Complemental strand, 74784 - 74721
Alignment:
Q  209 cttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttgg 273  Q
    ||||||||||||| ||||  | ||||||| ||||||| ||||||| |||||||||||| ||||||    
T  74784 cttcataatacaa-aatccccctaatttgagggaactgaaaaattgtattggaggagggttttgg 74721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0991 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 314
Target Start/End: Original strand, 3237 - 3340
Alignment:
Q  210 ttcataatacaagaatcttcttaatttgggggaactcaaaaattatattggaggaggattttggagggtctatatgaattcttcaaattcaatctatgtt 309  Q
    |||||||||||| |||| || | |||||||| |  | ||||||| |||| ||| ||  |||| |||||| |||| ||||||||||| || ||||||||||    
T  3237 ttcataatacaa-aatcctcctcatttggggaacttaaaaaattgtattagagaagagttttagagggtttatacgaattcttcaattttaatctatgtt 3335  T
Q  310 gttat 314  Q
    |||||    
T  3336 gttat 3340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 338 - 382
Target Start/End: Complemental strand, 20765 - 20721
Alignment:
Q  338 aaacttaatgcatttcatttaaaataagagtagagatgcaagatg 382  Q
    ||||||| ||||||||||||| ||||| ||||||||| |||||||    
T  20765 aaacttattgcatttcatttataataatagtagagatacaagatg 20721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 26932 - 26992
Alignment:
Q  328 ttacaagagaaaacttaatgcatttcatttaaaataagagtagagatgcaagatggaattc 388  Q
    |||||||| |||||||| ||||||||||| | ||||| || |||||| ||||||| |||||    
T  26932 ttacaagaaaaaacttattgcatttcattcataataatagcagagatacaagatgaaattc 26992  T

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