View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20609_high_8 (Length: 245)

Name: NF20609_high_8
Description: NF20609
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20609_high_8
NF20609_high_8
[»] chr7 (28 HSPs)
chr7 (23-245)||(28685259-28685487)
chr7 (19-80)||(35334935-35334996)
chr7 (19-80)||(42495956-42496017)
chr7 (19-79)||(42798623-42798683)
chr7 (19-80)||(42805477-42805538)
chr7 (19-80)||(48735242-48735303)
chr7 (19-79)||(46354148-46354208)
chr7 (19-79)||(47077974-47078034)
chr7 (19-78)||(18326989-18327048)
chr7 (23-73)||(1424035-1424085)
chr7 (19-80)||(2541140-2541202)
chr7 (19-80)||(32758214-32758275)
chr7 (19-79)||(21172128-21172188)
chr7 (19-74)||(40463836-40463891)
chr7 (19-65)||(7794627-7794673)
chr7 (19-68)||(10693192-10693241)
chr7 (19-68)||(19427010-19427059)
chr7 (19-68)||(27629599-27629648)
chr7 (19-79)||(7193039-7193099)
chr7 (19-79)||(43557426-43557486)
chr7 (19-79)||(47716413-47716473)
chr7 (19-78)||(5180278-5180337)
chr7 (19-66)||(11617709-11617756)
chr7 (19-73)||(14732943-14732997)
chr7 (19-80)||(28078252-28078313)
chr7 (23-80)||(42476826-42476883)
chr7 (23-79)||(21447544-21447600)
chr7 (19-79)||(22699091-22699151)
[»] chr5 (17 HSPs)
chr5 (19-80)||(41014272-41014333)
chr5 (19-79)||(24448844-24448904)
chr5 (19-73)||(4619227-4619281)
chr5 (19-81)||(38879533-38879595)
chr5 (19-73)||(43334162-43334216)
chr5 (19-80)||(23974734-23974794)
chr5 (19-80)||(37024675-37024736)
chr5 (19-79)||(1565385-1565445)
chr5 (19-79)||(8170103-8170163)
chr5 (22-70)||(12006454-12006502)
chr5 (20-80)||(22187238-22187298)
chr5 (19-79)||(35710267-35710327)
chr5 (23-84)||(22861791-22861852)
chr5 (35-79)||(19438703-19438747)
chr5 (19-80)||(22600407-22600468)
chr5 (39-80)||(41956885-41956926)
chr5 (19-55)||(31362456-31362492)
[»] chr2 (25 HSPs)
chr2 (19-80)||(25079839-25079900)
chr2 (19-79)||(8455437-8455497)
chr2 (19-73)||(11514396-11514450)
chr2 (19-80)||(14530271-14530332)
chr2 (19-79)||(12024039-12024099)
chr2 (19-78)||(10543653-10543712)
chr2 (19-81)||(21779380-21779442)
chr2 (19-80)||(22371010-22371071)
chr2 (19-79)||(5840982-5841042)
chr2 (19-79)||(7214488-7214548)
chr2 (19-79)||(17705449-17705509)
chr2 (19-62)||(17667973-17668016)
chr2 (19-73)||(25249858-25249912)
chr2 (19-61)||(44604826-44604868)
chr2 (19-80)||(23397719-23397780)
chr2 (22-67)||(39914430-39914475)
chr2 (20-68)||(24860108-24860156)
chr2 (19-55)||(40416992-40417028)
chr2 (19-62)||(17623535-17623578)
chr2 (26-73)||(27573581-27573628)
chr2 (34-80)||(39189557-39189603)
chr2 (19-79)||(9671134-9671195)
chr2 (26-79)||(26684750-26684803)
chr2 (19-55)||(5450263-5450299)
chr2 (19-63)||(24200746-24200790)
[»] chr1 (29 HSPs)
chr1 (19-84)||(32632677-32632742)
chr1 (19-79)||(47214488-47214548)
chr1 (19-80)||(34725217-34725278)
chr1 (19-79)||(20004213-20004273)
chr1 (19-79)||(46991781-46991841)
chr1 (19-80)||(34714599-34714660)
chr1 (20-68)||(4430148-4430196)
chr1 (19-79)||(18944620-18944680)
chr1 (19-79)||(22930188-22930248)
chr1 (19-79)||(45812656-45812716)
chr1 (19-81)||(8197018-8197080)
chr1 (19-73)||(18742082-18742136)
chr1 (19-73)||(19414422-19414476)
chr1 (26-80)||(22151480-22151534)
chr1 (19-73)||(30395849-30395903)
chr1 (19-73)||(40424725-40424779)
chr1 (19-60)||(6925096-6925137)
chr1 (19-80)||(14617014-14617075)
chr1 (19-68)||(19932873-19932922)
chr1 (19-83)||(27474254-27474318)
chr1 (19-79)||(38478401-38478461)
chr1 (19-79)||(46248074-46248134)
chr1 (19-73)||(25290146-25290200)
chr1 (19-73)||(45402078-45402131)
chr1 (19-68)||(18724666-18724714)
chr1 (19-68)||(20036209-20036257)
chr1 (19-64)||(23768441-23768486)
chr1 (23-68)||(33222972-33223017)
chr1 (20-80)||(41319928-41319988)
[»] chr8 (25 HSPs)
chr8 (19-79)||(20869617-20869677)
chr8 (19-79)||(35261633-35261693)
chr8 (19-68)||(6760787-6760836)
chr8 (19-68)||(28407381-28407430)
chr8 (19-80)||(28817747-28817808)
chr8 (19-80)||(30454216-30454277)
chr8 (19-80)||(36720749-36720810)
chr8 (19-79)||(7136650-7136710)
chr8 (19-79)||(12670369-12670429)
chr8 (19-79)||(29521806-29521866)
chr8 (19-81)||(13160654-13160716)
chr8 (32-86)||(40605039-40605093)
chr8 (19-80)||(39461117-39461178)
chr8 (19-79)||(24245405-24245465)
chr8 (19-79)||(44530103-44530163)
chr8 (19-80)||(2626472-2626533)
chr8 (19-68)||(17823541-17823590)
chr8 (25-73)||(25250482-25250530)
chr8 (19-79)||(26954086-26954146)
chr8 (19-73)||(20284194-20284248)
chr8 (19-73)||(21070823-21070877)
chr8 (26-68)||(5688802-5688846)
chr8 (19-68)||(18164880-18164929)
chr8 (19-55)||(22598135-22598171)
chr8 (19-79)||(45071219-45071279)
[»] chr4 (27 HSPs)
chr4 (19-79)||(11054267-11054327)
chr4 (19-79)||(21646918-21646978)
chr4 (19-82)||(5648210-5648273)
chr4 (19-80)||(6430746-6430807)
chr4 (19-68)||(16408724-16408773)
chr4 (19-80)||(48598944-48599005)
chr4 (19-79)||(23501747-23501807)
chr4 (19-80)||(5306784-5306845)
chr4 (19-80)||(20224937-20224998)
chr4 (22-79)||(20405047-20405104)
chr4 (23-73)||(14590797-14590847)
chr4 (19-73)||(16911522-16911576)
chr4 (19-73)||(17315419-17315473)
chr4 (19-68)||(8473741-8473790)
chr4 (26-79)||(13256525-13256578)
chr4 (19-80)||(30639333-30639394)
chr4 (22-79)||(55766590-55766647)
chr4 (19-79)||(47528649-47528709)
chr4 (19-90)||(5313115-5313186)
chr4 (28-79)||(10660358-10660409)
chr4 (28-79)||(10874503-10874554)
chr4 (25-80)||(29879624-29879679)
chr4 (23-61)||(14983806-14983844)
chr4 (25-78)||(20373921-20373974)
chr4 (20-73)||(30352713-30352766)
chr4 (19-55)||(487256-487292)
chr4 (23-79)||(55830846-55830902)
[»] chr3 (20 HSPs)
chr3 (19-79)||(13730725-13730785)
chr3 (19-79)||(52926331-52926391)
chr3 (19-86)||(8247810-8247877)
chr3 (25-78)||(25517300-25517353)
chr3 (19-80)||(40272933-40272994)
chr3 (19-79)||(4495785-4495845)
chr3 (19-79)||(10870072-10870132)
chr3 (19-80)||(7697006-7697067)
chr3 (19-80)||(16735416-16735477)
chr3 (19-79)||(46421158-46421218)
chr3 (19-80)||(1217065-1217126)
chr3 (26-82)||(9607176-9607232)
chr3 (19-66)||(26869696-26869743)
chr3 (19-78)||(29366843-29366902)
chr3 (19-80)||(5173841-5173903)
chr3 (19-80)||(13628913-13628975)
chr3 (19-80)||(22609742-22609802)
chr3 (19-80)||(39203491-39203552)
chr3 (28-64)||(11461771-11461807)
chr3 (19-81)||(12525384-12525443)
[»] chr6 (11 HSPs)
chr6 (23-80)||(14975205-14975262)
chr6 (19-79)||(1346918-1346978)
chr6 (19-68)||(12222038-12222087)
chr6 (19-79)||(1354876-1354936)
chr6 (19-73)||(3815198-3815252)
chr6 (23-80)||(8409196-8409253)
chr6 (27-79)||(1941809-1941861)
chr6 (23-79)||(6024187-6024243)
chr6 (26-73)||(24734593-24734640)
chr6 (23-68)||(19649292-19649337)
chr6 (19-79)||(33922949-33923009)
[»] scaffold0311 (1 HSPs)
scaffold0311 (19-68)||(10775-10824)
[»] scaffold0057 (2 HSPs)
scaffold0057 (19-80)||(24888-24949)
scaffold0057 (19-68)||(46796-46845)
[»] scaffold0024 (1 HSPs)
scaffold0024 (19-80)||(83828-83889)
[»] scaffold0168 (1 HSPs)
scaffold0168 (19-79)||(30533-30593)
[»] scaffold0187 (2 HSPs)
scaffold0187 (19-73)||(10169-10223)
scaffold0187 (19-73)||(20497-20551)
[»] scaffold0005 (1 HSPs)
scaffold0005 (23-73)||(226531-226581)
[»] scaffold0036 (1 HSPs)
scaffold0036 (19-79)||(35139-35200)
[»] scaffold0258 (1 HSPs)
scaffold0258 (19-73)||(13144-13198)


Alignment Details
Target: chr7 (Bit Score: 166; Significance: 6e-89; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 23 - 245
Target Start/End: Original strand, 28685259 - 28685487
Alignment:
Q  23 ccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctcacaattataatat------atagcaaggcaaaaatctggtacc 116  Q
    |||||| ||| |||||| ||||||||||||||| ||||||| | |||||||   ||||||||||||||||      ||||||||||||||||||||||||    
T  28685259 ccgtgatctttcagtcacatgacaacaactttaacagttgcactaaagttacgtctcacaattataatatatatatatagcaaggcaaaaatctggtacc 28685358  T
Q  117 ttctctttagtggctagtgtcatatcttcttttcctcctaccttctttcttggcatgagcttaacaagtgcttggattttattatctaatgtaatctaat 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28685359 ttctctttagtggctagtgtcatatcttcttttcctcctaccttctttcttggcatgagcttaacaagtgcttggattttattatctaatgtaatctaat 28685458  T
Q  217 tattatacatatatatgacatattgtttt 245  Q
    ||||||| |||||||||||||||||||||    
T  28685459 tattataaatatatatgacatattgtttt 28685487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 35334935 - 35334996
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||| |||||||||||||||| ||||||||||||||| |||||||||||| |||||||||||    
T  35334935 gaactcgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttatccctca 35334996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 42495956 - 42496017
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||| |||| ||||||    
T  42495956 gaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttacccctca 42496017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 42798683 - 42798623
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| |||||    
T  42798683 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 42798623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 42805538 - 42805477
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| |||||| |||| ||||||    
T  42805538 gaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttacccctca 42805477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 48735242 - 48735303
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  48735242 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 48735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 46354208 - 46354148
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||||| ||| ||||||||||||||| |||||||||||| |||| |||||    
T  46354208 gaacccgtgaccttccaatcacatgacaacaactttaccagttgcgccaaggttacccctc 46354148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 47077974 - 47078034
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| |||||    
T  47077974 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 47078034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 18327048 - 18326989
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccct 78  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||||||||| |||| ||||    
T  18327048 gaacccgtgaccttcaagtcacatgacaacaactttaccagttgcgccaaggttacccct 18326989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 1424035 - 1424085
Alignment:
Q  23 ccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    ||||||||||||||||| || |||||||||||| |||||||||||||||||    
T  1424035 ccgtgaccttccagtcacataacaacaactttaccagttgcgccaaagtta 1424085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 2541140 - 2541202
Alignment:
Q  19 gaacccgtgacctt-ccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  2541140 gaacccgtgacctttccagtcacatgacaacaactttaccagttgcgccaaggttacccctca 2541202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 32758275 - 32758214
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||| |||||||| |||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  32758275 gaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 32758214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 21172128 - 21172188
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| |||| | ||||||||||||||| |||||||||||| |||| |||||    
T  21172128 gaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttacccctc 21172188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 74
Target Start/End: Complemental strand, 40463891 - 40463836
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttat 74  Q
    |||||||||||||| |||||| ||||||||||||||| | |||||||||| |||||    
T  40463891 gaacccgtgaccttacagtcacatgacaacaactttaccggttgcgccaaggttat 40463836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 65
Target Start/End: Original strand, 7794627 - 7794673
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgc 65  Q
    ||||||||||||||||||||| || |||||||||||| |||||||||    
T  7794627 gaacccgtgaccttccagtcacataacaacaactttaccagttgcgc 7794673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 10693192 - 10693241
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    |||||||||||||| |||||| |||||||||||||||  |||||||||||    
T  10693192 gaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaa 10693241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 19427010 - 19427059
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    |||||||||||||| | |||| ||||||||||||||| ||||||||||||    
T  19427010 gaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaa 19427059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 27629648 - 27629599
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    |||||||||||||| | |||| ||||||||||||||| ||||||||||||    
T  27629648 gaacccgtgacctttcggtcaaatgacaacaactttaccagttgcgccaa 27629599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 7193099 - 7193039
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| |||||| |||||||||||||||  |||| |||||| |||| |||||    
T  7193099 gaacccgtgacctttcagtcacatgacaacaactttacaagttacgccaaggttacccctc 7193039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 43557486 - 43557426
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||| ||||||| |||||| ||||||||||||||| |||||||| ||| |||| |||||    
T  43557486 gaacccatgacctttcagtcacatgacaacaactttaccagttgcggcaaggttacccctc 43557426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 47716473 - 47716413
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||||||||| ||| ||||||||||  |||||| ||||| |||| |||||    
T  47716473 gaacccgtgaccttccagtcacatggcaacaacttttccagttgtgccaaggttacccctc 47716413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 5180278 - 5180337
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccct 78  Q
    |||||| ||||||| |||||| ||||||||||||||| |||||||| ||| |||| ||||    
T  5180278 gaacccttgacctttcagtcacatgacaacaactttaccagttgcgtcaaggttacccct 5180337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 11617709 - 11617756
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgcc 66  Q
    ||||| |||||||| |||||| ||||||||||||||| ||||||||||    
T  11617709 gaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 11617756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 14732943 - 14732997
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    |||||| |||| || |||||| ||||||||||||||| |||||||||||| ||||    
T  14732943 gaacccatgacttttcagtcacatgacaacaactttaccagttgcgccaaggtta 14732997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 28078252 - 28078313
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| |||||| ||||||||||||| |  ||||||||||  |||| ||||||    
T  28078252 gaacccgtgaccttacagtcacatgacaacaacttcacgagttgcgccagggttacccctca 28078313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 42476883 - 42476826
Alignment:
Q  23 ccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||||||||  ||||| ||||||||||||||| ||||| |||||| |||| ||||||    
T  42476883 ccgtgaccttttagtcacatgacaacaactttaccagttacgccaatgttacccctca 42476826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 21447600 - 21447544
Alignment:
Q  23 ccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||| | | |||||||||| |||| |||||||||||| |||| |||||    
T  21447600 ccgtgaccttccaattacatgacaacaaatttatcagttgcgccaaggttacccctc 21447544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 22699091 - 22699151
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||| | ||||| |||||| ||||||||||||||| |||||||| ||| |||| |||||    
T  22699091 gaacccataacctttcagtcacatgacaacaactttaccagttgcgtcaaggttacccctc 22699151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 2e-17; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 41014333 - 41014272
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  41014333 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctca 41014272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 24448904 - 24448844
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| |||||    
T  24448904 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 24448844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 4619227 - 4619281
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||    
T  4619227 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 4619281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 38879595 - 38879533
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctcac 81  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| |||||||    
T  38879595 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctcac 38879533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 43334216 - 43334162
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||    
T  43334216 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 43334162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 23974794 - 23974734
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||||||||||||||||||| ||||||||||||||| | |||||||||| |||| ||||||    
T  23974794 gaacccgtgaccttccagtcacatgacaacaacttta-ccgttgcgccaaggttacccctca 23974734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 37024675 - 37024736
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||| |||| |||| ||||||    
T  37024675 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctca 37024736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 1565445 - 1565385
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||| |||||| |||||| ||||||||||||||| |||||||||||| |||| |||||    
T  1565445 gaacccgcgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 1565385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 8170103 - 8170163
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| | |||| ||||||||||||||| |||||||||||| |||| |||||    
T  8170103 gaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaaggttagccctc 8170163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 12006454 - 12006502
Alignment:
Q  22 cccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaag 70  Q
    ||||||||||| |||||| ||||||||||||| ||||||||||||||||    
T  12006454 cccgtgacctttcagtcacatgacaacaacttgagcagttgcgccaaag 12006502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 80
Target Start/End: Complemental strand, 22187298 - 22187238
Alignment:
Q  20 aacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||| |||||||| |||||| |||||||||||||||  |||||||||||||||| ||||||    
T  22187298 aaccggtgacctttcagtcaaatgacaacaactttactagttgcgccaaagttacccctca 22187238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 35710327 - 35710267
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| |||| | ||||||||||||||| |||||||||||| |||| |||||    
T  35710327 gaacccgtgacctttcagttacatgacaacaactttaccagttgcgccaaggttacccctc 35710267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 84
Target Start/End: Original strand, 22861791 - 22861852
Alignment:
Q  23 ccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctcacaat 84  Q
    |||||||||| |||||| ||||||||||||||| |||||| ||||| |||| || |||||||    
T  22861791 ccgtgacctttcagtcacatgacaacaactttatcagttgtgccaaggttacccttcacaat 22861852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 79
Target Start/End: Complemental strand, 19438747 - 19438703
Alignment:
Q  35 agtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||||||||| |||||||||||| |||| |||||    
T  19438747 agtcatatgacaacaactttaccagttgcgccaaggttacccctc 19438703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 22600468 - 22600407
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||| |||||||||||| |||| |||||||||| ||||| || ||| |||| ||||||    
T  22600468 gaacccgtaaccttccagtcacatgataacaactttaccagttacgtcaaggttacccctca 22600407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 80
Target Start/End: Complemental strand, 41956926 - 41956885
Alignment:
Q  39 atatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||||||||||||||| |||||||||||| |||| ||||||    
T  41956926 atatgacaacaactttaccagttgcgccaatgttacccctca 41956885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 31362456 - 31362492
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaacttta 55  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  31362456 gaacccgtgaccttccaatcacatgacaacaacttta 31362492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 46; Significance: 2e-17; HSPs: 25)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 25079839 - 25079900
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  25079839 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctca 25079900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 8455437 - 8455497
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| |||||    
T  8455437 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 8455497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 11514450 - 11514396
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||    
T  11514450 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggtta 11514396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 14530332 - 14530271
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  14530332 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 14530271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 12024039 - 12024099
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| |||||    
T  12024039 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 12024099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 19 - 78
Target Start/End: Complemental strand, 10543712 - 10543653
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccct 78  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| ||||    
T  10543712 gaacccgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttacccct 10543653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 21779380 - 21779442
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctcac 81  Q
    |||||||||||||| |||||| ||||||||||||| | |||||||||||| |||| |||||||    
T  21779380 gaacccgtgacctttcagtcacatgacaacaacttcaccagttgcgccaaggttacccctcac 21779442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 22371071 - 22371010
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||||||||||| ||||||| ||||||||||||||| |||||| ||||| |||| ||||||    
T  22371071 gaacccgtgacctcccagtcacatgacaacaactttaccagttgggccaaggttacccctca 22371010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 5841042 - 5840982
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||||||||| ||||||||||||||| || |||| |||| |||| |||||    
T  5841042 gaacccgtgaccttccagtcacatgacaacaactttatcatttgcaccaaggttacccctc 5840982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 7214548 - 7214488
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||| ||||||| |||||| ||||||||||||||| |||||| |||||||||| |||||    
T  7214548 gaacccatgacctttcagtcacatgacaacaactttaccagttgtgccaaagttacccctc 7214488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 17705509 - 17705449
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||| |||| |||| |||||    
T  17705509 gaacccgtgaccttctagtcacatgacaacaactttaccagttgcaccaaggttacccctc 17705449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 17668016 - 17667973
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttg 62  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||    
T  17668016 gaacccgtgaccttccagtcacatgacaacaactttaccagttg 17667973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 25249858 - 25249912
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    |||||||||||||| |||||| ||||||||||||||| || ||||||||| ||||    
T  25249858 gaacccgtgaccttacagtcacatgacaacaactttaccaattgcgccaaggtta 25249912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 44604868 - 44604826
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagtt 61  Q
    ||||| ||||||||||||||| |||||||||||||||||||||    
T  44604868 gaacctgtgaccttccagtcacatgacaacaactttagcagtt 44604826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 23397780 - 23397719
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||| ||||||| |||||| ||||||||||||||| ||||||| |||| |||| ||||||    
T  23397780 gaacccatgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctca 23397719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 67
Target Start/End: Original strand, 39914430 - 39914475
Alignment:
Q  22 cccgtgaccttccagtcatatgacaacaactttagcagttgcgcca 67  Q
    |||||||||||||||||| ||||||||||||||| ||| |||||||    
T  39914430 cccgtgaccttccagtcacatgacaacaactttaccagatgcgcca 39914475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 24860108 - 24860156
Alignment:
Q  20 aacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    ||||||| |||||||||||| |||||||||| |||| ||||||||||||    
T  24860108 aacccgtaaccttccagtcacatgacaacaattttaccagttgcgccaa 24860156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 40416992 - 40417028
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaacttta 55  Q
    ||||||||||||||||||||| |||||||||||||||    
T  40416992 gaacccgtgaccttccagtcacatgacaacaacttta 40417028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 17623578 - 17623535
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttg 62  Q
    ||||||||||||||||||||  ||||||||||||||| ||||||    
T  17623578 gaacccgtgaccttccagtcgcatgacaacaactttaccagttg 17623535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 27573628 - 27573581
Alignment:
Q  26 tgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    ||||||| |||||| ||||||||||||||| |||||||||||| ||||    
T  27573628 tgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 27573581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 80
Target Start/End: Original strand, 39189557 - 39189603
Alignment:
Q  34 cagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  39189557 cagtcacatgacaacaactttaccagttgcgccaaggttacccctca 39189603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 9671195 - 9671134
Alignment:
Q  19 gaacccgtgacctt-ccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||| || ||||||| ||||||||||||||| | |||||||||| |||| |||||    
T  9671195 gaacccgtgacatttccagtcacatgacaacaactttaccggttgcgccaaggttacccctc 9671134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 26684750 - 26684803
Alignment:
Q  26 tgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||| || ||| ||||||||||||||| ||||||||| ||||||| |||||    
T  26684750 tgacctttcaatcacatgacaacaactttaccagttgcgctaaagttacccctc 26684803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 5450299 - 5450263
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaacttta 55  Q
    |||||||||||||| |||||| |||||||||||||||    
T  5450299 gaacccgtgacctttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 63
Target Start/End: Original strand, 24200746 - 24200790
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgc 63  Q
    ||||||||||| || |||||| ||||||||||||||| |||||||    
T  24200746 gaacccgtgacttttcagtcacatgacaacaactttaccagttgc 24200790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 2e-17; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 19 - 84
Target Start/End: Original strand, 32632677 - 32632742
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctcacaat 84  Q
    |||||||||||||| |||||||||||||||||||||| |||||||||||| |||| ||||| ||||    
T  32632677 gaacccgtgacctttcagtcatatgacaacaactttaccagttgcgccaaggttacccctctcaat 32632742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 47214548 - 47214488
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||||||||| |||||    
T  47214548 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttacccctc 47214488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 34725217 - 34725278
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  34725217 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 34725278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 20004213 - 20004273
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||| |||| |||| |||||    
T  20004213 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 20004273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 46991841 - 46991781
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||| |||| |||| |||||    
T  46991841 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 46991781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 34714660 - 34714599
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| || ||| ||||||||||||||| |||||||||||| |||| ||||||    
T  34714660 gaacccgtgacctttcaatcacatgacaacaactttaccagttgcgccaaggttacccctca 34714599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 68
Target Start/End: Original strand, 4430148 - 4430196
Alignment:
Q  20 aacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    |||||||||||||||||||| ||||||||||||||| ||| ||||||||    
T  4430148 aacccgtgaccttccagtcacatgacaacaactttaccagctgcgccaa 4430196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 18944680 - 18944620
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||| |||||||| |||||| ||||||||||||||| |||||||||||| |||| |||||    
T  18944680 gaacctgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 18944620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 22930188 - 22930248
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||| ||||||| |||||| ||||||||||||||| |||||||||||| |||| |||||    
T  22930188 gaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 22930248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 45812656 - 45812716
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||| |||||||| |||||| ||||||||||||||| |||||||||||| |||| |||||    
T  45812656 gaacctgtgacctttcagtcacatgacaacaactttatcagttgcgccaaggttacccctc 45812716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 8197080 - 8197018
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctcac 81  Q
    |||||||||||||| |||||| ||||||||||||| | ||||||| |||| |||| |||||||    
T  8197080 gaacccgtgacctttcagtcacatgacaacaacttgaccagttgcaccaaggttacccctcac 8197018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 18742082 - 18742136
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    |||||| ||||||| |||||| ||||||||||||||| |||||||||||| ||||    
T  18742082 gaacccttgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 18742136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 19414476 - 19414422
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    |||||||||||||| |||||||||||||||||||||| || || |||||| ||||    
T  19414476 gaacccgtgacctttcagtcatatgacaacaactttaccaattacgccaaggtta 19414422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 80
Target Start/End: Complemental strand, 22151534 - 22151480
Alignment:
Q  26 tgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||||| |||||| ||||||||||||||| ||||||||| ||| ||||||||||    
T  22151534 tgaccttacagtcagatgacaacaactttatcagttgcgctaaaattatccctca 22151480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 30395849 - 30395903
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||||||||| ||||    
T  30395849 gaacccgtgaccttaaagtcacatgacaacaactttaccagttgcgccaaggtta 30395903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 40424779 - 40424725
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    ||||||||| |||| |||||| ||||||||||||||| |||||||||||| ||||    
T  40424779 gaacccgtggcctttcagtcacatgacaacaactttaccagttgcgccaaggtta 40424725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 60
Target Start/End: Complemental strand, 6925137 - 6925096
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagt 60  Q
    ||||||||||||||||||||| ||||||||||||||| ||||    
T  6925137 gaacccgtgaccttccagtcacatgacaacaactttaccagt 6925096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 14617075 - 14617014
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||| ||||||||| |||||| ||||||||||||||| | |||||||||| |||| ||||||    
T  14617075 gaactcgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggttacccctca 14617014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 19932873 - 19932922
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    |||||| ||||||| |||||| ||||||||||||||| ||||||||||||    
T  19932873 gaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaa 19932922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 83
Target Start/End: Complemental strand, 27474318 - 27474254
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctcacaa 83  Q
    ||||| |||||||| |||||| ||||||||||||||| |||||| || || |||| |||||||||    
T  27474318 gaacctgtgacctttcagtcacatgacaacaactttaccagttgagctaaggttacccctcacaa 27474254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 38478401 - 38478461
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| |||||| |||||||||| ||||  ||||||||||| |||| |||||    
T  38478401 gaacccgtgacctttcagtcacatgacaacaagtttactagttgcgccaaggttacccctc 38478461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 46248074 - 46248134
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||| || |||||| ||||||||||||||| |||||| ||||| |||| |||||    
T  46248074 gaacccgtgacatttcagtcacatgacaacaactttaccagttgagccaaggttacccctc 46248134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 25290200 - 25290146
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    |||| ||||||||| |||||| ||||||||||||||| | |||||||||| ||||    
T  25290200 gaacacgtgacctttcagtcacatgacaacaactttacctgttgcgccaaggtta 25290146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 45402131 - 45402078
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    |||||||| |||||||| ||| ||||||||||||||| |||||||||||| ||||    
T  45402131 gaacccgttaccttcca-tcacatgacaacaactttaccagttgcgccaaggtta 45402078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 18724666 - 18724714
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    |||||||||||||| |||||| ||||||||||||||| | ||||||||||    
T  18724666 gaacccgtgacctttcagtcacatgacaacaacttta-ccgttgcgccaa 18724714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 20036257 - 20036209
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    |||||||||||||| |||||| ||||||||||||||| || |||||||||    
T  20036257 gaacccgtgacctttcagtcacatgacaacaactttacca-ttgcgccaa 20036209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 64
Target Start/End: Original strand, 23768441 - 23768486
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcg 64  Q
    ||||| |||||||| |||||| ||||||||||||||| ||||||||    
T  23768441 gaacctgtgaccttacagtcacatgacaacaactttaccagttgcg 23768486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 68
Target Start/End: Complemental strand, 33223017 - 33222972
Alignment:
Q  23 ccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    |||||||||| |||||| ||||||||||||||| | ||||||||||    
T  33223017 ccgtgacctttcagtcacatgacaacaactttaccggttgcgccaa 33222972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 80
Target Start/End: Original strand, 41319928 - 41319988
Alignment:
Q  20 aacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||| |||||||| |||||| ||||||||||||||| |||||| | ||| |||| ||||||    
T  41319928 aacctgtgacctttcagtcacatgacaacaactttaccagttgtgtcaaggttacccctca 41319988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 9e-17; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 20869617 - 20869677
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||||    
T  20869617 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttatccctc 20869677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 35261693 - 35261633
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| |||||    
T  35261693 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 35261633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 6760836 - 6760787
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    ||||||||||||||| ||||||||||||||||||||| ||||||||||||    
T  6760836 gaacccgtgaccttctagtcatatgacaacaactttaccagttgcgccaa 6760787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 28407430 - 28407381
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  28407430 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 28407381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 28817747 - 28817808
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||| |||| |||| ||||||    
T  28817747 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctca 28817808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 30454216 - 30454277
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  30454216 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 30454277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 36720810 - 36720749
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| |||||| |||| ||||||    
T  36720810 gaacccgtgaccttccagtcacatgacaacaactttaccagttacgccaaggttacccctca 36720749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 7136650 - 7136710
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||||||| |||| |||||    
T  7136650 gaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 7136710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 12670369 - 12670429
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| |||||    
T  12670369 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 12670429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 29521806 - 29521866
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||||||||| | ||||||||||||| |||||||||||| |||| |||||    
T  29521806 gaacccgtgaccttccagtcacacgacaacaactttatcagttgcgccaaggttacccctc 29521866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 13160716 - 13160654
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctcac 81  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||| | |||| |||||||    
T  13160716 gaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccgaggttacccctcac 13160654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 86
Target Start/End: Original strand, 40605039 - 40605093
Alignment:
Q  32 tccagtcatatgacaacaactttagcagttgcgccaaagttatccctcacaatta 86  Q
    |||| ||| ||||||||||||||| ||||||||||||||||| ||||||||||||    
T  40605039 tccaatcacatgacaacaactttaccagttgcgccaaagttacccctcacaatta 40605093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 39461117 - 39461178
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| |||||  ||||||||||||||| |||||||||||| |||| ||||||    
T  39461117 gaacccgtgacctttcagtctcatgacaacaactttaccagttgcgccaaggttacccctca 39461178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 24245465 - 24245405
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||| |||| |||| |||||    
T  24245465 gaacccgtgacctttcagtcacatgacaacaactttaccagttgccccaaggttacccctc 24245405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 44530163 - 44530103
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||| ||||| |||||| |||||||| |||||||||||| |||| |||||    
T  44530163 gaacccgtgaccttctagtcacatgacagcaactttaccagttgcgccaaggttacccctc 44530103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 2626533 - 2626472
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| | |||| ||||||||||||||| || ||||||||| |||| ||||||    
T  2626533 gaacccgtgacctttcggtcacatgacaacaactttaccaattgcgccaaggttacccctca 2626472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 17823590 - 17823541
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    |||||||||||||| | |||| ||||||||||||||| ||||||||||||    
T  17823590 gaacccgtgacctttcggtcacatgacaacaactttaccagttgcgccaa 17823541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 25250530 - 25250482
Alignment:
Q  25 gtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    ||||||||||||||| ||||||||||||||| |||||| ||||| ||||    
T  25250530 gtgaccttccagtcacatgacaacaactttaccagttgtgccaaggtta 25250482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 26954146 - 26954086
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||| | ||| ||||||||||||||| || || ||||||||||| |||||    
T  26954146 gaacccgtgaccttctaatcacatgacaacaactttaccaattacgccaaagttacccctc 26954086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 20284194 - 20284248
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    |||||||||||||| |||||| ||||||||||||||| | |||||| ||| ||||    
T  20284194 gaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggtta 20284248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 21070823 - 21070877
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    |||||||||||||| |||||| ||||||||||||||| | |||||| ||| ||||    
T  21070823 gaacccgtgacctttcagtcacatgacaacaactttacccgttgcgtcaaggtta 21070877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 68
Target Start/End: Complemental strand, 5688846 - 5688802
Alignment:
Q  26 tgaccttccagt--catatgacaacaactttagcagttgcgccaa 68  Q
    ||||||||||||  |||||||||||||||||| ||||||||||||    
T  5688846 tgaccttccagtgacatatgacaacaactttaccagttgcgccaa 5688802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 18164880 - 18164929
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    |||||||||||||| |||||| ||||||||||||| | | ||||||||||    
T  18164880 gaacccgtgacctttcagtcacatgacaacaacttcaccggttgcgccaa 18164929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 22598171 - 22598135
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaacttta 55  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  22598171 gaacccgtgacctttcagtcatgtgacaacaacttta 22598135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 45071279 - 45071219
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| || ||| ||||||||||||||| ||||  |||||| |||| |||||    
T  45071279 gaacccgtgaccttacaatcacatgacaacaactttaccagtatcgccaaggttacccctc 45071219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 9e-17; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 11054267 - 11054327
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||||||||| |||||    
T  11054267 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaagttacccctc 11054327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 21646978 - 21646918
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||| ||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||    
T  21646978 gaacctgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttatccctc 21646918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 5648273 - 5648210
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctcaca 82  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| ||||||||    
T  5648273 gaacccgtgaccttacagtcacatgacaacaactttaccagttgcgccaaggttacccctcaca 5648210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 6430746 - 6430807
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  6430746 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 6430807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 16408724 - 16408773
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  16408724 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaa 16408773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 48598944 - 48599005
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  48598944 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 48599005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 23501807 - 23501747
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| |||||    
T  23501807 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 23501747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 5306784 - 5306845
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| |||||| |||||| |||||||| |||||||||||| |||| ||||||    
T  5306784 gaacccgtgacctttcagtcacatgacatcaactttaccagttgcgccaaggttacccctca 5306845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 20224998 - 20224937
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||| ||||||| |||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  20224998 gaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 20224937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 22 - 79
Target Start/End: Complemental strand, 20405104 - 20405047
Alignment:
Q  22 cccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||||||| ||||||||||||||| |||||||| ||| |||| |||||    
T  20405104 cccgtgaccttccagtcacatgacaacaactttaccagttgcgtcaaggttacccctc 20405047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 73
Target Start/End: Complemental strand, 14590847 - 14590797
Alignment:
Q  23 ccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||| ||||    
T  14590847 ccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 14590797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 73
Target Start/End: Complemental strand, 16911576 - 16911522
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||||||||| ||||    
T  16911576 gaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggtta 16911522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 17315419 - 17315473
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    |||||||||||||| |||||| ||||||||||||||| | |||||||||| ||||    
T  17315419 gaacccgtgacctttcagtcacatgacaacaactttaccggttgcgccaaggtta 17315473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 8473741 - 8473790
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    |||||||  ||||||| |||||||||||||||||||| ||||||||||||    
T  8473741 gaacccgcaaccttccggtcatatgacaacaactttaccagttgcgccaa 8473790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 79
Target Start/End: Original strand, 13256525 - 13256578
Alignment:
Q  26 tgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| ||||||||||||||| ||||||| |||| |||| |||||    
T  13256525 tgaccttccagtcacatgacaacaactttaccagttgcaccaaggttacccctc 13256578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 30639394 - 30639333
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||| |||||||| |||||| | ||||||||||||| |||||||||||| |||| ||||||    
T  30639394 gaaccagtgacctttcagtcacaagacaacaactttaccagttgcgccaaggttacccctca 30639333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 55766590 - 55766647
Alignment:
Q  22 cccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||| |||| ||||||||||||||| |||||||| ||| |||| |||||    
T  55766590 cccgtgaccttccggtcacatgacaacaactttaccagttgcgtcaaggttacccctc 55766647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 47528649 - 47528709
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||| |||||||| |||||| ||||||||||||||| ||||||| |||| |||| |||||    
T  47528649 gaacctgtgacctttcagtcacatgacaacaactttaccagttgcaccaaggttacccctc 47528709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 90
Target Start/End: Original strand, 5313115 - 5313186
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctcacaattataat 90  Q
    |||||||||||||| || ||| ||||||||||||||| ||||| |||||| |||| || ||| |||| ||||    
T  5313115 gaacccgtgacctttcaatcacatgacaacaactttaccagttacgccaaggttacccgtcataattttaat 5313186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 10660409 - 10660358
Alignment:
Q  28 accttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||| |||||| ||||||||||||||| |||||||||||| |||| |||||    
T  10660409 acctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 10660358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 10874554 - 10874503
Alignment:
Q  28 accttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||| |||||| ||||||||||||||| |||||||||||| |||| |||||    
T  10874554 acctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 10874503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 80
Target Start/End: Original strand, 29879624 - 29879679
Alignment:
Q  25 gtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||||||| ||||| ||||||||||||||| ||||||| |||| |||| ||||||    
T  29879624 gtgaccttctagtcacatgacaacaactttatcagttgcaccaatgttacccctca 29879679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 61
Target Start/End: Complemental strand, 14983844 - 14983806
Alignment:
Q  23 ccgtgaccttccagtcatatgacaacaactttagcagtt 61  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  14983844 ccgtgaccttccaatcatatgacaacaactttaccagtt 14983806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 20373921 - 20373974
Alignment:
Q  25 gtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccct 78  Q
    ||||| || ||||||||||| |||||||| | ||||||||||||||||| ||||    
T  20373921 gtgacatttcagtcatatgagaacaacttgaccagttgcgccaaagttacccct 20373974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 73
Target Start/End: Original strand, 30352713 - 30352766
Alignment:
Q  20 aacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    ||||||||||||| | ||||  |||||||||||||| |||||||||||| ||||    
T  30352713 aacccgtgacctttcggtcacttgacaacaactttaccagttgcgccaaggtta 30352766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 487256 - 487292
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaacttta 55  Q
    |||||||||||||| |||||| |||||||||||||||    
T  487256 gaacccgtgacctttcagtcacatgacaacaacttta 487292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 55830846 - 55830902
Alignment:
Q  23 ccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||  ||| ||||||||||||||| |||||||| ||| |||| |||||    
T  55830846 ccgtgaccttccgatcacatgacaacaactttaccagttgcgtcaaggttacccctc 55830902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 13730725 - 13730785
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| |||||    
T  13730725 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 13730785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 52926331 - 52926391
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||||||| |||| |||||    
T  52926331 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctc 52926391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 19 - 86
Target Start/End: Original strand, 8247810 - 8247877
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctcacaatta 86  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| |||||| |||||    
T  8247810 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctcataatta 8247877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 25 - 78
Target Start/End: Original strand, 25517300 - 25517353
Alignment:
Q  25 gtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccct 78  Q
    ||||||||||||||| ||||||||||||||| |||||||||||| |||||||||    
T  25517300 gtgaccttccagtcacatgacaacaactttaccagttgcgccaaggttatccct 25517353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 40272933 - 40272994
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||| |||||||||||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  40272933 gaacccatgaccttccagtcacatgacaacaactttaccagttgcgccaaggttacccctca 40272994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 4495785 - 4495845
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||| || |||| |||||    
T  4495785 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcgcgaaggttacccctc 4495845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 10870072 - 10870132
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| |||||    
T  10870072 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 10870132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 7697006 - 7697067
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  7697006 gaacccgtgaccttttagtcacatgacaacaactttaccagttgcgccaaggttacccctca 7697067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 16735477 - 16735416
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||||||||| || |||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  16735477 gaacccgtgacgttacagtcacatgacaacaactttaccagttgcgccaaggttacccctca 16735416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 46421158 - 46421218
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||||  ||||| ||||||||||||||| |||||||||||| |||| |||||    
T  46421158 gaacccgtgacctttaagtcacatgacaacaactttaccagttgcgccaaggttacccctc 46421218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 1217126 - 1217065
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| |||| | ||||| ||||||||| |||||||||||| |||| ||||||    
T  1217126 gaacccgtgacctttcagtgacatgactacaactttaccagttgcgccaaggttacccctca 1217065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 82
Target Start/End: Complemental strand, 9607232 - 9607176
Alignment:
Q  26 tgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctcaca 82  Q
    ||||||| |||||| |||||||||||||||  ||||||||||| |||| ||||||||    
T  9607232 tgacctttcagtcacatgacaacaactttacaagttgcgccaaggttacccctcaca 9607176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Complemental strand, 26869743 - 26869696
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgcc 66  Q
    ||||| |||||||| |||||| ||||||||||||||| ||||||||||    
T  26869743 gaacctgtgacctttcagtcacatgacaacaactttaccagttgcgcc 26869696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 29366843 - 29366902
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccct 78  Q
    ||||||||||||||  ||||| ||||||||||||||| ||||| |||||| |||| ||||    
T  29366843 gaacccgtgaccttttagtcacatgacaacaactttaccagttacgccaaggttacccct 29366902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 5173841 - 5173903
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaac-tttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| |||||| ||||||||||| ||||  ||||||||||| |||| ||||||    
T  5173841 gaacccgtgacctttcagtcacatgacaacaacttttacgagttgcgccaaggttacccctca 5173903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 13628913 - 13628975
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaac-tttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| |||||| ||||||||||| |||| |||||| ||||| |||| ||||||    
T  13628913 gaacccgtgacctttcagtcacatgacaacaacttttaccagttgtgccaaggttacccctca 13628975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 22609802 - 22609742
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||| ||||| |||||| ||||||||||||||| | |||||||||| |||| ||||||    
T  22609802 gaacccgttaccttacagtcacatgacaacaacttta-ccgttgcgccaaggttacccctca 22609742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 39203552 - 39203491
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||| |||||||| |||||| |||||||||||||||  ||||| ||||| |||| ||||||    
T  39203552 gaacctgtgacctttcagtcacatgacaacaactttacaagttgtgccaaggttacccctca 39203491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 11461771 - 11461807
Alignment:
Q  28 accttccagtcatatgacaacaactttagcagttgcg 64  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  11461771 accttcctgtcatatgacaacaactttaccagttgcg 11461807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 81
Target Start/End: Complemental strand, 12525443 - 12525384
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctcac 81  Q
    ||||| |||||||| |||||||||||||||   |||| |||||||||||| |||| |||||||    
T  12525443 gaacctgtgacctttcagtcatatgacaac---tttaccagttgcgccaaggttacccctcac 12525384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 23 - 80
Target Start/End: Original strand, 14975205 - 14975262
Alignment:
Q  23 ccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    ||||||||||||||||| ||||||||||||||| | |||||||||| |||||||||||    
T  14975205 ccgtgaccttccagtcacatgacaacaactttaccggttgcgccaaggttatccctca 14975262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 1346978 - 1346918
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||||| |||| |||||    
T  1346978 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 1346918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Original strand, 12222038 - 12222087
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    |||||||||||||| |||||| ||||||||||||||| ||||||||||||    
T  12222038 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgccaa 12222087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 1354876 - 1354936
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||| |||||||| |||||| ||||||||||||||| |||||||||||| |||| |||||    
T  1354876 gaaccagtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 1354936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 3815198 - 3815252
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    ||||||||||| || |||||| ||||||||||||||| |||||||||||| ||||    
T  3815198 gaacccgtgacatttcagtcacatgacaacaactttaccagttgcgccaaggtta 3815252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 23 - 80
Target Start/End: Complemental strand, 8409253 - 8409196
Alignment:
Q  23 ccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||| |||||| || |||||||||||| |||||||||||| |||| ||||||    
T  8409253 ccgtgacctttcagtcacattacaacaactttaccagttgcgccaaggttacccctca 8409196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 1941861 - 1941809
Alignment:
Q  27 gaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||| ||||||||||||||| ||||||| |||| |||| |||||    
T  1941861 gaccttccagtcagatgacaacaactttaccagttgcaccaaggttacccctc 1941809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 23 - 79
Target Start/End: Complemental strand, 6024243 - 6024187
Alignment:
Q  23 ccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||||||||||| ||| ||||||||||||||| |||||||| |||| ||| |||||    
T  6024243 ccgtgaccttccaatcacatgacaacaactttaccagttgcgtcaaaattacccctc 6024187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 73
Target Start/End: Complemental strand, 24734640 - 24734593
Alignment:
Q  26 tgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    ||||||| |||||| ||||||||||||||| |||||||||||| ||||    
T  24734640 tgacctttcagtcacatgacaacaactttaccagttgcgccaatgtta 24734593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 68
Target Start/End: Original strand, 19649292 - 19649337
Alignment:
Q  23 ccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    |||||| ||| |||||| ||||||||||||||| ||||||||||||    
T  19649292 ccgtgatctttcagtcacatgacaacaactttatcagttgcgccaa 19649337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 33922949 - 33923009
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||| ||||| || |||||| ||||||||||||||| | |||||||||| |||| |||||    
T  33922949 gaacctgtgacttttcagtcaaatgacaacaactttaccggttgcgccaaggttacccctc 33923009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 10824 - 10775
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||| ||||    
T  10824 gaacccgtgaccttccagtcacatgacaacaactttaccagttgcaccaa 10775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Original strand, 24888 - 24949
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||| ||||||| |||||| ||||||||||||||| |||||||||||| |||| ||||||    
T  24888 gaacccatgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctca 24949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 68
Target Start/End: Complemental strand, 46845 - 46796
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaa 68  Q
    ||||||||||||||| ||||| ||||||||||||||| || |||||||||    
T  46845 gaacccgtgaccttctagtcacatgacaacaactttaccaattgcgccaa 46796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 19 - 80
Target Start/End: Complemental strand, 83889 - 83828
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctca 80  Q
    |||||||||||||| |||||| |||||||||||||||  ||||||||||| |||| ||||||    
T  83889 gaacccgtgacctttcagtcacatgacaacaactttactagttgcgccaaggttacccctca 83828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 79
Target Start/End: Complemental strand, 30593 - 30533
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagttatccctc 79  Q
    ||||| |||||||| |||||| ||||||||||||||| |||||||||||| |||| |||||    
T  30593 gaaccggtgacctttcagtcacatgacaacaactttaccagttgcgccaaggttacccctc 30533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 35; Significance: 0.00000000009; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 10169 - 10223
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||| ||| ||||    
T  10169 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggtta 10223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 20497 - 20551
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||| ||| ||||    
T  20497 gaacccgtgacctttcagtcacatgacaacaactttaccagttgcgtcaaggtta 20551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 23 - 73
Target Start/End: Original strand, 226531 - 226581
Alignment:
Q  23 ccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    |||||||||| |||||| ||||||||||||||| |||||||||||| ||||    
T  226531 ccgtgacctttcagtcacatgacaacaactttaccagttgcgccaaggtta 226581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 35139 - 35200
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaa-ctttagcagttgcgccaaagttatccctc 79  Q
    |||||||||||||| |||||| ||||||| || ||||| ||||||| |||||||||||||||    
T  35139 gaacccgtgaccttacagtcacatgacaataaactttaccagttgcaccaaagttatccctc 35200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 73
Target Start/End: Original strand, 13144 - 13198
Alignment:
Q  19 gaacccgtgaccttccagtcatatgacaacaactttagcagttgcgccaaagtta 73  Q
    ||||| |||||||| |||||| ||||||||||||||| | |||||||||| ||||    
T  13144 gaaccggtgacctttcagtcacatgacaacaactttaccggttgcgccaaggtta 13198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University