View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20610_high_11 (Length: 299)
Name: NF20610_high_11
Description: NF20610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20610_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 19 - 163
Target Start/End: Complemental strand, 30336517 - 30336373
Alignment:
| Q |
19 |
tcccataggtttattttcacaaagttagtacaaccacgctttcgaacaagttttaaaaggataatctattacatcccctctaacttatcattgtattcat |
118 |
Q |
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| T |
30336517 |
tcccataggtttattttcacaaagttagtacaaccacgctttcgaacaagttttaaaaggataatctattacatcccctctaatttatcattgtattcat |
30336418 |
T |
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| Q |
119 |
cgtatcgtccaacaacttccatgataaaattaaacaaaaatgtgc |
163 |
Q |
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| T |
30336417 |
catatcgtccaacaacttccatgataaaattaaacaaaaatgtgc |
30336373 |
T |
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