View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20610_high_8 (Length: 345)

Name: NF20610_high_8
Description: NF20610
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20610_high_8
NF20610_high_8
[»] chr8 (14 HSPs)
chr8 (8-287)||(8041835-8042114)
chr8 (290-325)||(4414227-4414262)
chr8 (290-325)||(4623903-4623938)
chr8 (290-325)||(22798542-22798577)
chr8 (292-325)||(23275580-23275613)
chr8 (292-325)||(23403601-23403634)
chr8 (292-325)||(30204701-30204734)
chr8 (289-325)||(45310068-45310104)
chr8 (290-325)||(3001430-3001465)
chr8 (290-325)||(4234179-4234214)
chr8 (290-325)||(14842309-14842344)
chr8 (290-325)||(16655979-16656014)
chr8 (290-325)||(21567708-21567743)
chr8 (290-325)||(37630003-37630038)
[»] chr1 (11 HSPs)
chr1 (8-287)||(42526964-42527246)
chr1 (289-325)||(9224877-9224913)
chr1 (290-325)||(6750363-6750398)
chr1 (290-325)||(39001948-39001983)
chr1 (292-325)||(571650-571683)
chr1 (290-325)||(794914-794949)
chr1 (290-325)||(3695407-3695442)
chr1 (290-325)||(26653993-26654028)
chr1 (290-325)||(41998932-41998967)
chr1 (289-319)||(44272417-44272447)
chr1 (297-325)||(11121865-11121893)
[»] chr3 (7 HSPs)
chr3 (287-325)||(39391955-39391993)
chr3 (290-325)||(14201718-14201753)
chr3 (290-325)||(37115940-37115975)
chr3 (290-325)||(45602985-45603020)
chr3 (292-325)||(36404275-36404308)
chr3 (290-325)||(35534483-35534518)
chr3 (290-325)||(52742353-52742388)
[»] scaffold0532 (1 HSPs)
scaffold0532 (289-325)||(11319-11355)
[»] chr6 (7 HSPs)
chr6 (289-325)||(1067800-1067836)
chr6 (292-325)||(2814943-2814976)
chr6 (292-325)||(24640405-24640438)
chr6 (292-325)||(26394042-26394075)
chr6 (290-325)||(444522-444557)
chr6 (290-325)||(6200215-6200250)
chr6 (290-325)||(12324173-12324208)
[»] chr2 (12 HSPs)
chr2 (289-325)||(30393645-30393681)
chr2 (290-325)||(5958967-5959002)
chr2 (290-325)||(6974570-6974605)
chr2 (290-325)||(21423366-21423401)
chr2 (290-325)||(24475985-24476020)
chr2 (290-325)||(37060132-37060167)
chr2 (290-325)||(37140187-37140222)
chr2 (293-325)||(15070443-15070475)
chr2 (290-325)||(10217408-10217443)
chr2 (290-325)||(27004450-27004485)
chr2 (295-325)||(4382213-4382243)
chr2 (289-325)||(22194336-22194372)
[»] scaffold0306 (1 HSPs)
scaffold0306 (290-325)||(13109-13144)
[»] scaffold0152 (1 HSPs)
scaffold0152 (290-325)||(22183-22218)
[»] chr5 (15 HSPs)
chr5 (290-325)||(2068964-2068999)
chr5 (290-325)||(3711183-3711218)
chr5 (290-325)||(3729386-3729421)
chr5 (290-325)||(9793785-9793820)
chr5 (290-325)||(39508369-39508404)
chr5 (290-325)||(41929342-41929377)
chr5 (291-325)||(9793688-9793722)
chr5 (292-325)||(21020686-21020719)
chr5 (293-325)||(21583853-21583885)
chr5 (290-325)||(8159123-8159158)
chr5 (290-325)||(9913803-9913838)
chr5 (290-325)||(25081768-25081803)
chr5 (290-325)||(25139737-25139772)
chr5 (290-325)||(34766937-34766972)
chr5 (289-323)||(20736213-20736247)
[»] chr4 (8 HSPs)
chr4 (290-325)||(35929708-35929743)
chr4 (290-325)||(53584619-53584654)
chr4 (290-325)||(56100191-56100226)
chr4 (291-325)||(12701040-12701074)
chr4 (291-325)||(21555382-21555416)
chr4 (290-325)||(19598368-19598403)
chr4 (290-325)||(41842789-41842824)
chr4 (290-325)||(36609466-36609502)
[»] scaffold0140 (1 HSPs)
scaffold0140 (290-325)||(21477-21512)
[»] chr7 (3 HSPs)
chr7 (290-325)||(8163696-8163731)
chr7 (290-325)||(40337119-40337154)
chr7 (290-325)||(41326042-41326077)
[»] scaffold1248 (1 HSPs)
scaffold1248 (291-325)||(970-1004)
[»] scaffold0952 (1 HSPs)
scaffold0952 (291-325)||(1309-1343)


Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 8 - 287
Target Start/End: Complemental strand, 8042114 - 8041835
Alignment:
Q  8 gagatgaacacaatgtagatgcaccgggaaataagtaggttctgaattcagttctgcaactttggatccatatatcatccaatacttacaacaaagttca 107  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| ||| |||||||||||||||||||||||||||||    
T  8042114 gagatggacacaatgtagatgcaccgggaaataagtaggttctgaattcaattctgcaactctggacccacatatcatccaatacttacaacaaagttca 8042015  T
Q  108 gattagtccatgcatgggatgagtagttctggagatccttttcaaatgagaaaattttccgatgcttcacaacatggagacttggagggacttaggaaag 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  8042014 gattagtccatgcatgggatgagtagttctggagatccttttcaaatgagaaatttttccgatgcttcacaacatggagacttggagggacttcggaaag 8041915  T
Q  208 catatcttcagaccttttagtcaacaaaagcaacaatacgaacttccacttcttagcaaatctgggcttcttaatcaagg 287  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8041914 catatcttcagactttttagtcaacaaaagcaacaatacgaacttccacttcttaggaaatctgggcttcttaatcaagg 8041835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 4414227 - 4414262
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  4414227 tgtttgaaatagtttttgttttcagtttttgaaata 4414262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 4623938 - 4623903
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  4623938 tgtttgaaatagtttttgttttcagtttttgaaata 4623903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 22798542 - 22798577
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  22798542 tgtttgaaatagtttttgttttcagtttttgaaata 22798577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 23275613 - 23275580
Alignment:
Q  292 tttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||    
T  23275613 tttgaaatagtttttgttttcagtttttgaaata 23275580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 23403601 - 23403634
Alignment:
Q  292 tttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||    
T  23403601 tttgaaatagtttttgttttcagtttttgaaata 23403634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 30204734 - 30204701
Alignment:
Q  292 tttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||    
T  30204734 tttgaaatagtttttgttttcagtttttgaaata 30204701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 45310104 - 45310068
Alignment:
Q  289 ttgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||| |||||||||||    
T  45310104 ttgtttgaaatagtttttgttttcaatttttgaaata 45310068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 3001465 - 3001430
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||| ||||||||||||||||||    
T  3001465 tgtttgaaatagtttttattttcagtttttgaaata 3001430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 4234179 - 4234214
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||| ||||||||||||||||||||||||||||||    
T  4234179 tgtttaaaatagtttttgttttcagtttttgaaata 4234214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 14842309 - 14842344
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||| ||||||||||||||||||||||||    
T  14842309 tgtttgaaataatttttgttttcagtttttgaaata 14842344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 16655979 - 16656014
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||||||||| |||||    
T  16655979 tgtttgaaatagtttttgttttcagtttttaaaata 16656014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 21567708 - 21567743
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||| ||||||    
T  21567708 tgtttgaaatagtttttgttttcagttttagaaata 21567743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 37630003 - 37630038
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||||||||| |||||    
T  37630003 tgtttgaaatagtttttgttttcagttttttaaata 37630038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 7e-80; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 8 - 287
Target Start/End: Original strand, 42526964 - 42527246
Alignment:
Q  8 gagatgaacacaatgtagatgcaccgggaaat-aagtaggttctgaattcagttctgcaactttggatccatatatcatccaatacttacaacaaagttc 106  Q
    |||||| ||||||| ||||||||| ||||||| ||||| ||||||| |||| |||||||||| |||| |||  ||||||||||| ||| || ||||||||    
T  42526964 gagatggacacaatatagatgcactgggaaatcaagtacgttctgacttcaattctgcaactctggacccacgtatcatccaatgcttgcagcaaagttc 42527063  T
Q  107 agattagtccatgcatgggatgagtagttctggagatccttttcaaatgagaaaattttccgatgcttcacaacatggagacttggagggacttaggaaa 206  Q
     || || ||||||||||||||||| |||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||  ||||    
T  42527064 ggagtactccatgcatgggatgagcagttctcgagatccttttcaaatgagaaatttttctgatgcttcacaacatggagacttagagggacttcagaaa 42527163  T
Q  207 gcatatcttcagac-ctt-ttagtcaacaaaagcaacaatacgaacttccacttcttagcaaatctgggcttcttaatcaagg 287  Q
    ||||||||  |||| ||| ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||    
T  42527164 gcatatctcgagactcttcttagtcaacaaaagcaacagtatgaacttccacttcttagcaaatctgggcttcttaatcaagg 42527246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 9224913 - 9224877
Alignment:
Q  289 ttgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||||||||||||||||    
T  9224913 ttgtttgaaatagtttttgttttcagtttttgaaata 9224877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 6750398 - 6750363
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  6750398 tgtttgaaatagtttttgttttcagtttttgaaata 6750363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 39001948 - 39001983
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  39001948 tgtttgaaatagtttttgttttcagtttttgaaata 39001983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 571650 - 571683
Alignment:
Q  292 tttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||    
T  571650 tttgaaatagtttttgttttcagtttttgaaata 571683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 794914 - 794949
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||| ||||||||||||||||||||||||    
T  794914 tgtttgaaatattttttgttttcagtttttgaaata 794949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 3695407 - 3695442
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||| ||||||||||||    
T  3695407 tgtttgaaatagtttttgttttcggtttttgaaata 3695442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 26654028 - 26653993
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||| |||||||||||    
T  26654028 tgtttgaaatagtttttgttttcaatttttgaaata 26653993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 41998967 - 41998932
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||| |||||||||||    
T  41998967 tgtttgaaatagtttttgttttcattttttgaaata 41998932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 319
Target Start/End: Complemental strand, 44272447 - 44272417
Alignment:
Q  289 ttgtttgaaatagtttttgttttcagttttt 319  Q
    |||||||||||||||||||||||||||||||    
T  44272447 ttgtttgaaatagtttttgttttcagttttt 44272417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 297 - 325
Target Start/End: Original strand, 11121865 - 11121893
Alignment:
Q  297 aatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||||||||    
T  11121865 aatagtttttgttttcagtttttgaaata 11121893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 287 - 325
Target Start/End: Original strand, 39391955 - 39391993
Alignment:
Q  287 gattgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39391955 gattgtttgaaatagtttttgttttcagtttttgaaata 39391993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 14201718 - 14201753
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  14201718 tgtttgaaatagtttttgttttcagtttttgaaata 14201753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 37115975 - 37115940
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  37115975 tgtttgaaatagtttttgttttcagtttttgaaata 37115940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 45602985 - 45603020
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  45602985 tgtttgaaatagtttttgttttcagtttttgaaata 45603020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 36404308 - 36404275
Alignment:
Q  292 tttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||    
T  36404308 tttgaaatagtttttgttttcagtttttgaaata 36404275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 35534483 - 35534518
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||| ||||||||||||||||||||||||||||||    
T  35534483 tgtttaaaatagtttttgttttcagtttttgaaata 35534518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 52742353 - 52742388
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||| ||||||||||||||    
T  52742353 tgtttgaaatagtttttgtttccagtttttgaaata 52742388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0532 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 11319 - 11355
Alignment:
Q  289 ttgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||||||||||||||||    
T  11319 ttgtttgaaatagtttttgttttcagtttttgaaata 11355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.000000000008; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 1067800 - 1067836
Alignment:
Q  289 ttgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||||||||||||||||    
T  1067800 ttgtttgaaatagtttttgttttcagtttttgaaata 1067836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 2814976 - 2814943
Alignment:
Q  292 tttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||    
T  2814976 tttgaaatagtttttgttttcagtttttgaaata 2814943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 24640438 - 24640405
Alignment:
Q  292 tttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||    
T  24640438 tttgaaatagtttttgttttcagtttttgaaata 24640405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 26394075 - 26394042
Alignment:
Q  292 tttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||    
T  26394075 tttgaaatagtttttgttttcagtttttgaaata 26394042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 444522 - 444557
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||| ||||||||||||||||||||||||||||||    
T  444522 tgtttaaaatagtttttgttttcagtttttgaaata 444557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 6200250 - 6200215
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||| ||||||||||||||||||||||||    
T  6200250 tgtttgaaatattttttgttttcagtttttgaaata 6200215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 12324173 - 12324208
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||| |||||||||||||||||||||||||||    
T  12324173 tgtttgaagtagtttttgttttcagtttttgaaata 12324208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.000000000008; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 30393681 - 30393645
Alignment:
Q  289 ttgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||||||||||||||||    
T  30393681 ttgtttgaaatagtttttgttttcagtttttgaaata 30393645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 5958967 - 5959002
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  5958967 tgtttgaaatagtttttgttttcagtttttgaaata 5959002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 6974605 - 6974570
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  6974605 tgtttgaaatagtttttgttttcagtttttgaaata 6974570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 21423366 - 21423401
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  21423366 tgtttgaaatagtttttgttttcagtttttgaaata 21423401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 24476020 - 24475985
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  24476020 tgtttgaaatagtttttgttttcagtttttgaaata 24475985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 37060167 - 37060132
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  37060167 tgtttgaaatagtttttgttttcagtttttgaaata 37060132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 37140222 - 37140187
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  37140222 tgtttgaaatagtttttgttttcagtttttgaaata 37140187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 325
Target Start/End: Complemental strand, 15070475 - 15070443
Alignment:
Q  293 ttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||||||||||||    
T  15070475 ttgaaatagtttttgttttcagtttttgaaata 15070443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 10217443 - 10217408
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||| ||||||||||||||||||    
T  10217443 tgtttgaaatagtttttattttcagtttttgaaata 10217408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 27004450 - 27004485
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||| |||||||||||    
T  27004450 tgtttgaaatagtttttgttttcaatttttgaaata 27004485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 325
Target Start/End: Original strand, 4382213 - 4382243
Alignment:
Q  295 gaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||||||||||    
T  4382213 gaaatagtttttgttttcagtttttgaaata 4382243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 22194372 - 22194336
Alignment:
Q  289 ttgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||  ||||||||||||    
T  22194372 ttgtttgaaatagtttttgtttttggtttttgaaata 22194336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 13144 - 13109
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  13144 tgtttgaaatagtttttgttttcagtttttgaaata 13109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 22183 - 22218
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  22183 tgtttgaaatagtttttgttttcagtttttgaaata 22218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 36; Significance: 0.00000000003; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 2068964 - 2068999
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  2068964 tgtttgaaatagtttttgttttcagtttttgaaata 2068999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 3711183 - 3711218
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  3711183 tgtttgaaatagtttttgttttcagtttttgaaata 3711218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 3729421 - 3729386
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  3729421 tgtttgaaatagtttttgttttcagtttttgaaata 3729386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 9793820 - 9793785
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  9793820 tgtttgaaatagtttttgttttcagtttttgaaata 9793785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 39508404 - 39508369
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  39508404 tgtttgaaatagtttttgttttcagtttttgaaata 39508369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 41929342 - 41929377
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  41929342 tgtttgaaatagtttttgttttcagtttttgaaata 41929377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 325
Target Start/End: Complemental strand, 9793722 - 9793688
Alignment:
Q  291 gtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||||||||||||||    
T  9793722 gtttgaaatagtttttgttttcagtttttgaaata 9793688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 21020686 - 21020719
Alignment:
Q  292 tttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||    
T  21020686 tttgaaatagtttttgttttcagtttttgaaata 21020719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 293 - 325
Target Start/End: Original strand, 21583853 - 21583885
Alignment:
Q  293 ttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||||||||||||    
T  21583853 ttgaaatagtttttgttttcagtttttgaaata 21583885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 8159158 - 8159123
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||| |||||||||||    
T  8159158 tgtttgaaatagtttttgttttcaatttttgaaata 8159123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 9913803 - 9913838
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||| |||||||||||||    
T  9913803 tgtttgaaatagtttttgtttttagtttttgaaata 9913838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 25081768 - 25081803
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||| ||||||||||    
T  25081768 tgtttgaaatagtttttgttttcaggttttgaaata 25081803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 25139737 - 25139772
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||| ||||||||||    
T  25139737 tgtttgaaatagtttttgttttcaggttttgaaata 25139772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 34766972 - 34766937
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||| |||||||||||    
T  34766972 tgtttgaaatagtttttgttttcaatttttgaaata 34766937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 289 - 323
Target Start/End: Complemental strand, 20736247 - 20736213
Alignment:
Q  289 ttgtttgaaatagtttttgttttcagtttttgaaa 323  Q
    ||||||||||||||||||||||||| |||||||||    
T  20736247 ttgtttgaaatagtttttgttttcaatttttgaaa 20736213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 35929708 - 35929743
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  35929708 tgtttgaaatagtttttgttttcagtttttgaaata 35929743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 53584654 - 53584619
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  53584654 tgtttgaaatagtttttgttttcagtttttgaaata 53584619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 56100226 - 56100191
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||||||||||    
T  56100226 tgtttgaaatagtttttgttttcagtttttgaaata 56100191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 325
Target Start/End: Original strand, 12701040 - 12701074
Alignment:
Q  291 gtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||||||||||||||    
T  12701040 gtttgaaatagtttttgttttcagtttttgaaata 12701074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 291 - 325
Target Start/End: Original strand, 21555382 - 21555416
Alignment:
Q  291 gtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||||||||||||||||    
T  21555382 gtttgaaatagtttttgttttcagtttttgaaata 21555416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 19598368 - 19598403
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||| ||||||    
T  19598368 tgtttgaaatagtttttgttttcagttttcgaaata 19598403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 41842789 - 41842824
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||| ||||||||||||    
T  41842789 tgtttgaaatagtttttgttttcggtttttgaaata 41842824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 36609502 - 36609466
Alignment:
Q  290 tgtttgaaatagtttttg-ttttcagtttttgaaata 325  Q
    |||||||||||||||||| ||||||||||||||||||    
T  36609502 tgtttgaaatagtttttgtttttcagtttttgaaata 36609466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 21477 - 21512
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||| ||||||||||||||||||||||||||    
T  21477 tgtttgaaacagtttttgttttcagtttttgaaata 21512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000008; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 8163731 - 8163696
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||| ||||||||||||    
T  8163731 tgtttgaaatagtttttgttttctgtttttgaaata 8163696  T

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Target: chr7; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Complemental strand, 40337154 - 40337119
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||| ||||||    
T  40337154 tgtttgaaatagtttttgttttcagttttcgaaata 40337119  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 290 - 325
Target Start/End: Original strand, 41326042 - 41326077
Alignment:
Q  290 tgtttgaaatagtttttgttttcagtttttgaaata 325  Q
    |||||||||||||||||||||| |||||||||||||    
T  41326042 tgtttgaaatagtttttgttttgagtttttgaaata 41326077  T

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Target: scaffold1248 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1248
Description:

Target: scaffold1248; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 325
Target Start/End: Original strand, 970 - 1004
Alignment:
Q  291 gtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||| |||||    
T  970 gtttgaaatagtttttgttttcagtttttaaaata 1004  T

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Target: scaffold0952 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 291 - 325
Target Start/End: Complemental strand, 1343 - 1309
Alignment:
Q  291 gtttgaaatagtttttgttttcagtttttgaaata 325  Q
    ||||||||||||||||||||||||||||| |||||    
T  1343 gtttgaaatagtttttgttttcagtttttaaaata 1309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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